Pathway ID Description Reaction ID EC number Gene Model ID Protein ID Evidence PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab000040 Zm00024ab000040_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab000060 Zm00024ab000060_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab000060 Zm00024ab000060_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab000060 Zm00024ab000060_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab000120 Zm00024ab000120_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab000260 Zm00024ab000260_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab000370 Zm00024ab000370_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab000700 Zm00024ab000700_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab000700 Zm00024ab000700_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab000700 Zm00024ab000700_P001 manual PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab000760 Zm00024ab000760_P001 expected PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00024ab000840 Zm00024ab000840_P001 viridiplantae PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00024ab001140 Zm00024ab001140_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00024ab001140 Zm00024ab001140_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00024ab001140 Zm00024ab001140_P002 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00024ab001140 Zm00024ab001140_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00024ab001180 Zm00024ab001180_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00024ab001180 Zm00024ab001180_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab001190 Zm00024ab001190_P003 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00024ab001290 Zm00024ab001290_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00024ab001330 Zm00024ab001330_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00024ab001330 Zm00024ab001330_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00024ab001340 Zm00024ab001340_P001 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab001440 Zm00024ab001440_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab001440 Zm00024ab001440_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab001440 Zm00024ab001440_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab001470 Zm00024ab001470_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab001470 Zm00024ab001470_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab001470 Zm00024ab001470_P001 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab001510 Zm00024ab001510_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab001630 Zm00024ab001630_P003 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab001720 Zm00024ab001720_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab001720 Zm00024ab001720_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab001720 Zm00024ab001720_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab001720 Zm00024ab001720_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab001950 Zm00024ab001950_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab002280 Zm00024ab002280_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab002360 Zm00024ab002360_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab002390 Zm00024ab002390_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab002440 Zm00024ab002440_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab002510 Zm00024ab002510_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab002560 Zm00024ab002560_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00024ab002590 Zm00024ab002590_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00024ab002590 Zm00024ab002590_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00024ab002590 Zm00024ab002590_P002 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00024ab002590 Zm00024ab002590_P002 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab002610 Zm00024ab002610_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab002610 Zm00024ab002610_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab002800 Zm00024ab002800_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab002800 Zm00024ab002800_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab002810 Zm00024ab002810_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab002970 Zm00024ab002970_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab002970 Zm00024ab002970_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab003000 Zm00024ab003000_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab003000 Zm00024ab003000_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab003000 Zm00024ab003000_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab003010 Zm00024ab003010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab003010 Zm00024ab003010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab003010 Zm00024ab003010_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab003020 Zm00024ab003020_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab003020 Zm00024ab003020_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab003020 Zm00024ab003020_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab003030 Zm00024ab003030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab003030 Zm00024ab003030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab003030 Zm00024ab003030_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab003060 Zm00024ab003060_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00024ab003070 Zm00024ab003070_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab003140 Zm00024ab003140_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab003170 Zm00024ab003170_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab003170 Zm00024ab003170_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab003170 Zm00024ab003170_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab003640 Zm00024ab003640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab003650 Zm00024ab003650_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab003660 Zm00024ab003660_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab003730 Zm00024ab003730_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab003730 Zm00024ab003730_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab003730 Zm00024ab003730_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab003730 Zm00024ab003730_P002 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00024ab004110 Zm00024ab004110_P001 ubiquitous PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab004330 Zm00024ab004330_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab004330 Zm00024ab004330_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab004330 Zm00024ab004330_P003 expected THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab004340 Zm00024ab004340_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab004460 Zm00024ab004460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab004460 Zm00024ab004460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab004460 Zm00024ab004460_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab004470 Zm00024ab004470_P001 NA SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00024ab004660 Zm00024ab004660_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00024ab004660 Zm00024ab004660_P002 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab004930 Zm00024ab004930_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab004930 Zm00024ab004930_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab004930 Zm00024ab004930_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab004950 Zm00024ab004950_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab004970 Zm00024ab004970_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab004970 Zm00024ab004970_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab005050 Zm00024ab005050_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab005050 Zm00024ab005050_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab005050 Zm00024ab005050_P001 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00024ab005090 Zm00024ab005090_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00024ab005090 Zm00024ab005090_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab005200 Zm00024ab005200_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab005240 Zm00024ab005240_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab005240 Zm00024ab005240_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab005260 Zm00024ab005260_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab005400 Zm00024ab005400_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab005400 Zm00024ab005400_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab005400 Zm00024ab005400_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab005480 Zm00024ab005480_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab005520 Zm00024ab005520_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab005520 Zm00024ab005520_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab005520 Zm00024ab005520_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab005520 Zm00024ab005520_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab005710 Zm00024ab005710_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab005730 Zm00024ab005730_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab005750 Zm00024ab005750_P001 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00024ab005800 Zm00024ab005800_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00024ab005800 Zm00024ab005800_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab005980 Zm00024ab005980_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00024ab006100 Zm00024ab006100_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00024ab006160 Zm00024ab006160_P001 ubiquitous PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab006240 Zm00024ab006240_P001 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab006370 Zm00024ab006370_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab006420 Zm00024ab006420_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab006440 Zm00024ab006440_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab006500 Zm00024ab006500_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab006500 Zm00024ab006500_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab006500 Zm00024ab006500_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab006650 Zm00024ab006650_P001 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab006830 Zm00024ab006830_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab006830 Zm00024ab006830_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab006850 Zm00024ab006850_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab006850 Zm00024ab006850_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00024ab006860 Zm00024ab006860_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00024ab006860 Zm00024ab006860_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007160 Zm00024ab007160_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab007170 Zm00024ab007170_P002 conditional PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00024ab007200 Zm00024ab007200_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab007550 Zm00024ab007550_P004 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab008120 Zm00024ab008120_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab008220 Zm00024ab008220_P001 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab008450 Zm00024ab008450_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab008540 Zm00024ab008540_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab008540 Zm00024ab008540_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00024ab008610 Zm00024ab008610_P001 viridiplantae PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00024ab008690 Zm00024ab008690_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab008750 Zm00024ab008750_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab008750 Zm00024ab008750_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab008830 Zm00024ab008830_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab008830 Zm00024ab008830_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab008830 Zm00024ab008830_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab008830 Zm00024ab008830_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab008860 Zm00024ab008860_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab008970 Zm00024ab008970_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab008970 Zm00024ab008970_P002 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab009140 Zm00024ab009140_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab009140 Zm00024ab009140_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00024ab009230 Zm00024ab009230_P001 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00024ab009230 Zm00024ab009230_P001 conditional HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00024ab009230 Zm00024ab009230_P002 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00024ab009230 Zm00024ab009230_P002 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab009230 Zm00024ab009230_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab009230 Zm00024ab009230_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab009230 Zm00024ab009230_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab009230 Zm00024ab009230_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab009360 Zm00024ab009360_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab009360 Zm00024ab009360_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab009400 Zm00024ab009400_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab009470 Zm00024ab009470_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab009470 Zm00024ab009470_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab009470 Zm00024ab009470_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab009540 Zm00024ab009540_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab009540 Zm00024ab009540_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab009540 Zm00024ab009540_P001 NA PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab009550 Zm00024ab009550_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab009580 Zm00024ab009580_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab009580 Zm00024ab009580_P002 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab009670 Zm00024ab009670_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab009740 Zm00024ab009740_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00024ab009840 Zm00024ab009840_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00024ab009840 Zm00024ab009840_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab009880 Zm00024ab009880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab009880 Zm00024ab009880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab009880 Zm00024ab009880_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab009880 Zm00024ab009880_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab010000 Zm00024ab010000_P001 expected PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00024ab010030 Zm00024ab010030_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00024ab010030 Zm00024ab010030_P001 conditional PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00024ab010160 Zm00024ab010160_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00024ab010160 Zm00024ab010160_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab010200 Zm00024ab010200_P003 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab010390 Zm00024ab010390_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010520 Zm00024ab010520_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010530 Zm00024ab010530_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab010540 Zm00024ab010540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010540 Zm00024ab010540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab010540 Zm00024ab010540_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab010640 Zm00024ab010640_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab010640 Zm00024ab010640_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab010640 Zm00024ab010640_P003 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab010720 Zm00024ab010720_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab010720 Zm00024ab010720_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab010730 Zm00024ab010730_P003 viridiplantae PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00024ab010860 Zm00024ab010860_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab010920 Zm00024ab010920_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab011010 Zm00024ab011010_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab011010 Zm00024ab011010_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab011010 Zm00024ab011010_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab011010 Zm00024ab011010_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab011090 Zm00024ab011090_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab011090 Zm00024ab011090_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab011090 Zm00024ab011090_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab011310 Zm00024ab011310_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab011360 Zm00024ab011360_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab011470 Zm00024ab011470_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab011470 Zm00024ab011470_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab011470 Zm00024ab011470_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab011490 Zm00024ab011490_P001 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00024ab011510 Zm00024ab011510_P001 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab011580 Zm00024ab011580_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00024ab011600 Zm00024ab011600_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00024ab011600 Zm00024ab011600_P002 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab011660 Zm00024ab011660_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab011660 Zm00024ab011660_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab011660 Zm00024ab011660_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab011660 Zm00024ab011660_P003 manual PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab011910 Zm00024ab011910_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab011910 Zm00024ab011910_P002 viridiplantae PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab011970 Zm00024ab011970_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab012000 Zm00024ab012000_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab012050 Zm00024ab012050_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab012050 Zm00024ab012050_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab012210 Zm00024ab012210_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab012340 Zm00024ab012340_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab012390 Zm00024ab012390_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab012510 Zm00024ab012510_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab012510 Zm00024ab012510_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab012510 Zm00024ab012510_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab012530 Zm00024ab012530_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab012530 Zm00024ab012530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab012650 Zm00024ab012650_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab012750 Zm00024ab012750_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab012790 Zm00024ab012790_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab012790 Zm00024ab012790_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab012800 Zm00024ab012800_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab012800 Zm00024ab012800_P002 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00024ab012850 Zm00024ab012850_P003 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab013090 Zm00024ab013090_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab013090 Zm00024ab013090_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab013100 Zm00024ab013100_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab013100 Zm00024ab013100_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab013100 Zm00024ab013100_P003 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab013160 Zm00024ab013160_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab013160 Zm00024ab013160_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) GLUTAMATE-N-ACETYLTRANSFERASE-RXN EC-2.3.1.35 Zm00024ab013160 Zm00024ab013160_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab013520 Zm00024ab013520_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab013530 Zm00024ab013530_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab013530 Zm00024ab013530_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab013630 Zm00024ab013630_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab013630 Zm00024ab013630_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab013630 Zm00024ab013630_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab013660 Zm00024ab013660_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab013660 Zm00024ab013660_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab013660 Zm00024ab013660_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab013720 Zm00024ab013720_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab013780 Zm00024ab013780_P001 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P002 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P003 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P003 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P003 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00024ab013840 Zm00024ab013840_P003 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab013850 Zm00024ab013850_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab013860 Zm00024ab013860_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab013890 Zm00024ab013890_P004 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab013950 Zm00024ab013950_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab013950 Zm00024ab013950_P002 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab013970 Zm00024ab013970_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab013970 Zm00024ab013970_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab013980 Zm00024ab013980_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab014080 Zm00024ab014080_P003 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00024ab014100 Zm00024ab014100_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00024ab014100 Zm00024ab014100_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab014110 Zm00024ab014110_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab014360 Zm00024ab014360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab014360 Zm00024ab014360_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00024ab014430 Zm00024ab014430_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00024ab014520 Zm00024ab014520_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00024ab014520 Zm00024ab014520_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab014530 Zm00024ab014530_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab014690 Zm00024ab014690_P001 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab014710 Zm00024ab014710_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab014710 Zm00024ab014710_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab014710 Zm00024ab014710_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab014710 Zm00024ab014710_P004 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab014980 Zm00024ab014980_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab014980 Zm00024ab014980_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab014980 Zm00024ab014980_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab014980 Zm00024ab014980_P002 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab015020 Zm00024ab015020_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab015040 Zm00024ab015040_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab015130 Zm00024ab015130_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab015130 Zm00024ab015130_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab015140 Zm00024ab015140_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab015140 Zm00024ab015140_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab015170 Zm00024ab015170_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00024ab015480 Zm00024ab015480_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00024ab015480 Zm00024ab015480_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab015540 Zm00024ab015540_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00024ab015590 Zm00024ab015590_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00024ab015590 Zm00024ab015590_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab015600 Zm00024ab015600_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00024ab015810 Zm00024ab015810_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab015990 Zm00024ab015990_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab016090 Zm00024ab016090_P005 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab016100 Zm00024ab016100_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab016220 Zm00024ab016220_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab016230 Zm00024ab016230_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00024ab016280 Zm00024ab016280_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab016300 Zm00024ab016300_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab016300 Zm00024ab016300_P002 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab016310 Zm00024ab016310_P003 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab016410 Zm00024ab016410_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab016410 Zm00024ab016410_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab016430 Zm00024ab016430_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab016430 Zm00024ab016430_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab016740 Zm00024ab016740_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab016740 Zm00024ab016740_P001 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab016790 Zm00024ab016790_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab016790 Zm00024ab016790_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab016800 Zm00024ab016800_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab016800 Zm00024ab016800_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab016800 Zm00024ab016800_P001 NA DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab016810 Zm00024ab016810_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab016810 Zm00024ab016810_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab016830 Zm00024ab016830_P001 expected GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab016950 Zm00024ab016950_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab016950 Zm00024ab016950_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab017300 Zm00024ab017300_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab017300 Zm00024ab017300_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017310 Zm00024ab017310_P004 conditional PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00024ab017400 Zm00024ab017400_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00024ab017400 Zm00024ab017400_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab017410 Zm00024ab017410_P004 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab017430 Zm00024ab017430_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab017430 Zm00024ab017430_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab017450 Zm00024ab017450_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab017450 Zm00024ab017450_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab017450 Zm00024ab017450_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab017450 Zm00024ab017450_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab017490 Zm00024ab017490_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab017490 Zm00024ab017490_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab017490 Zm00024ab017490_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab017490 Zm00024ab017490_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab017590 Zm00024ab017590_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab017660 Zm00024ab017660_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab017660 Zm00024ab017660_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00024ab017690 Zm00024ab017690_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00024ab017690 Zm00024ab017690_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017800 Zm00024ab017800_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017810 Zm00024ab017810_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab017810 Zm00024ab017810_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab017990 Zm00024ab017990_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017990 Zm00024ab017990_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab017990 Zm00024ab017990_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab018060 Zm00024ab018060_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab018080 Zm00024ab018080_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab018390 Zm00024ab018390_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018390 Zm00024ab018390_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018390 Zm00024ab018390_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab018410 Zm00024ab018410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018410 Zm00024ab018410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018410 Zm00024ab018410_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab018440 Zm00024ab018440_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018440 Zm00024ab018440_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018440 Zm00024ab018440_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab018450 Zm00024ab018450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018450 Zm00024ab018450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018450 Zm00024ab018450_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab018460 Zm00024ab018460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018460 Zm00024ab018460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab018460 Zm00024ab018460_P001 conditional PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00024ab018560 Zm00024ab018560_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00024ab018560 Zm00024ab018560_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00024ab018560 Zm00024ab018560_P001 NA GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab018640 Zm00024ab018640_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00024ab018760 Zm00024ab018760_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00024ab018760 Zm00024ab018760_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00024ab018830 Zm00024ab018830_P001 NA PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab018900 Zm00024ab018900_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab018950 Zm00024ab018950_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab018950 Zm00024ab018950_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab018950 Zm00024ab018950_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab019050 Zm00024ab019050_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab019050 Zm00024ab019050_P002 expected PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab019180 Zm00024ab019180_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab019350 Zm00024ab019350_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab019380 Zm00024ab019380_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab019380 Zm00024ab019380_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab019410 Zm00024ab019410_P009 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab019470 Zm00024ab019470_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab019480 Zm00024ab019480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab019630 Zm00024ab019630_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab019720 Zm00024ab019720_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab020170 Zm00024ab020170_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab020250 Zm00024ab020250_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab020250 Zm00024ab020250_P002 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab020310 Zm00024ab020310_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab020310 Zm00024ab020310_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00024ab020460 Zm00024ab020460_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00024ab020460 Zm00024ab020460_P002 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab020520 Zm00024ab020520_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab020630 Zm00024ab020630_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab020630 Zm00024ab020630_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab020630 Zm00024ab020630_P003 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00024ab020990 Zm00024ab020990_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00024ab020990 Zm00024ab020990_P002 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab021110 Zm00024ab021110_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab021130 Zm00024ab021130_P002 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00024ab021340 Zm00024ab021340_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00024ab021340 Zm00024ab021340_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00024ab021340 Zm00024ab021340_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00024ab021340 Zm00024ab021340_P001 ubiquitous PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab021470 Zm00024ab021470_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab021470 Zm00024ab021470_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab021470 Zm00024ab021470_P001 conditional PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00024ab021530 Zm00024ab021530_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00024ab021530 Zm00024ab021530_P001 NA PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00024ab021560 Zm00024ab021560_P001 expected PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00024ab021560 Zm00024ab021560_P002 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab021810 Zm00024ab021810_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021870 Zm00024ab021870_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021870 Zm00024ab021870_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021870 Zm00024ab021870_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021890 Zm00024ab021890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021890 Zm00024ab021890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021890 Zm00024ab021890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021900 Zm00024ab021900_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021900 Zm00024ab021900_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021900 Zm00024ab021900_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021910 Zm00024ab021910_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021910 Zm00024ab021910_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021910 Zm00024ab021910_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021930 Zm00024ab021930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021930 Zm00024ab021930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021930 Zm00024ab021930_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021940 Zm00024ab021940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021940 Zm00024ab021940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021940 Zm00024ab021940_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021950 Zm00024ab021950_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021950 Zm00024ab021950_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021950 Zm00024ab021950_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021960 Zm00024ab021960_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021960 Zm00024ab021960_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021960 Zm00024ab021960_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab021990 Zm00024ab021990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab021990 Zm00024ab021990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab021990 Zm00024ab021990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab022010 Zm00024ab022010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab022010 Zm00024ab022010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab022010 Zm00024ab022010_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab022040 Zm00024ab022040_P001 expected PWY-7861 L-pipecolate biosynthesis RXN-8166 EC-1.5.1.1 Zm00024ab022130 Zm00024ab022130_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab022260 Zm00024ab022260_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab022260 Zm00024ab022260_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab022260 Zm00024ab022260_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab022260 Zm00024ab022260_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab022270 Zm00024ab022270_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab022280 Zm00024ab022280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab022280 Zm00024ab022280_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab022280 Zm00024ab022280_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab022490 Zm00024ab022490_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab022690 Zm00024ab022690_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab022690 Zm00024ab022690_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab022690 Zm00024ab022690_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab022700 Zm00024ab022700_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab022700 Zm00024ab022700_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab022700 Zm00024ab022700_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab022710 Zm00024ab022710_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab022740 Zm00024ab022740_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab022740 Zm00024ab022740_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab022740 Zm00024ab022740_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab022760 Zm00024ab022760_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab022760 Zm00024ab022760_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab022760 Zm00024ab022760_P001 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab022870 Zm00024ab022870_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab023070 Zm00024ab023070_P002 conditional VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab023130 Zm00024ab023130_P003 viridiplantae PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P002 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P003 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab023230 Zm00024ab023230_P003 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab023340 Zm00024ab023340_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab023340 Zm00024ab023340_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab023340 Zm00024ab023340_P003 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab023370 Zm00024ab023370_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab023600 Zm00024ab023600_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab023610 Zm00024ab023610_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab023770 Zm00024ab023770_P002 conditional LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab023820 Zm00024ab023820_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab024070 Zm00024ab024070_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab024070 Zm00024ab024070_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab024070 Zm00024ab024070_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab024100 Zm00024ab024100_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab024100 Zm00024ab024100_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab024130 Zm00024ab024130_P001 viridiplantae PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab024200 Zm00024ab024200_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab024330 Zm00024ab024330_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab024330 Zm00024ab024330_P001 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab024360 Zm00024ab024360_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab024360 Zm00024ab024360_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab024450 Zm00024ab024450_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab024460 Zm00024ab024460_P002 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab024610 Zm00024ab024610_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab024990 Zm00024ab024990_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab024990 Zm00024ab024990_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab024990 Zm00024ab024990_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab025030 Zm00024ab025030_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab025030 Zm00024ab025030_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab025210 Zm00024ab025210_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab025210 Zm00024ab025210_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab025210 Zm00024ab025210_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab025210 Zm00024ab025210_P001 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab025220 Zm00024ab025220_P001 expected PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab025310 Zm00024ab025310_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab025310 Zm00024ab025310_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab025310 Zm00024ab025310_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab025360 Zm00024ab025360_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab025550 Zm00024ab025550_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab025550 Zm00024ab025550_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab025550 Zm00024ab025550_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab025550 Zm00024ab025550_P004 ubiquitous PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab025620 Zm00024ab025620_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab025620 Zm00024ab025620_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab025620 Zm00024ab025620_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab025620 Zm00024ab025620_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab025720 Zm00024ab025720_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab025720 Zm00024ab025720_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab025720 Zm00024ab025720_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab025720 Zm00024ab025720_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab025860 Zm00024ab025860_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab025860 Zm00024ab025860_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab025860 Zm00024ab025860_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab025860 Zm00024ab025860_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab025860 Zm00024ab025860_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab025860 Zm00024ab025860_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab025880 Zm00024ab025880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab025880 Zm00024ab025880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab025880 Zm00024ab025880_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab025950 Zm00024ab025950_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab025950 Zm00024ab025950_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab025950 Zm00024ab025950_P001 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00024ab026010 Zm00024ab026010_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00024ab026010 Zm00024ab026010_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00024ab026010 Zm00024ab026010_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab026030 Zm00024ab026030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab026030 Zm00024ab026030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab026030 Zm00024ab026030_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab026190 Zm00024ab026190_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab026310 Zm00024ab026310_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab026310 Zm00024ab026310_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab026310 Zm00024ab026310_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab026320 Zm00024ab026320_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab026370 Zm00024ab026370_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab026370 Zm00024ab026370_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab026370 Zm00024ab026370_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab026490 Zm00024ab026490_P001 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00024ab026560 Zm00024ab026560_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00024ab026560 Zm00024ab026560_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00024ab026570 Zm00024ab026570_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00024ab026570 Zm00024ab026570_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab026750 Zm00024ab026750_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab026750 Zm00024ab026750_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab026840 Zm00024ab026840_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab026940 Zm00024ab026940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab026940 Zm00024ab026940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab026940 Zm00024ab026940_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab026980 Zm00024ab026980_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab027000 Zm00024ab027000_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab027190 Zm00024ab027190_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab027380 Zm00024ab027380_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab027500 Zm00024ab027500_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab027500 Zm00024ab027500_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab027500 Zm00024ab027500_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab027500 Zm00024ab027500_P002 expected PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab027700 Zm00024ab027700_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab027700 Zm00024ab027700_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab027800 Zm00024ab027800_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab028040 Zm00024ab028040_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab028040 Zm00024ab028040_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab028160 Zm00024ab028160_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab028160 Zm00024ab028160_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab028260 Zm00024ab028260_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00024ab028320 Zm00024ab028320_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00024ab028320 Zm00024ab028320_P001 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00024ab028320 Zm00024ab028320_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00024ab028400 Zm00024ab028400_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00024ab028400 Zm00024ab028400_P001 conditional PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00024ab028440 Zm00024ab028440_P001 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00024ab028440 Zm00024ab028440_P001 expected PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00024ab028440 Zm00024ab028440_P002 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00024ab028440 Zm00024ab028440_P002 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab028520 Zm00024ab028520_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00024ab028760 Zm00024ab028760_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00024ab028760 Zm00024ab028760_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00024ab028760 Zm00024ab028760_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00024ab028760 Zm00024ab028760_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab028780 Zm00024ab028780_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab028780 Zm00024ab028780_P002 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab029100 Zm00024ab029100_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab029100 Zm00024ab029100_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00024ab029220 Zm00024ab029220_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00024ab029220 Zm00024ab029220_P001 viridiplantae PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab029300 Zm00024ab029300_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab029300 Zm00024ab029300_P002 ubiquitous PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab029330 Zm00024ab029330_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab029330 Zm00024ab029330_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab029330 Zm00024ab029330_P001 NA PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab029370 Zm00024ab029370_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab029460 Zm00024ab029460_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab029460 Zm00024ab029460_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab029490 Zm00024ab029490_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab029630 Zm00024ab029630_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab029630 Zm00024ab029630_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab029630 Zm00024ab029630_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab029680 Zm00024ab029680_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab029750 Zm00024ab029750_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab029750 Zm00024ab029750_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00024ab029960 Zm00024ab029960_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00024ab029960 Zm00024ab029960_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab030050 Zm00024ab030050_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab030080 Zm00024ab030080_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab030080 Zm00024ab030080_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab030080 Zm00024ab030080_P003 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab030100 Zm00024ab030100_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab030250 Zm00024ab030250_P001 expected PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab030380 Zm00024ab030380_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab030380 Zm00024ab030380_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab030430 Zm00024ab030430_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab030430 Zm00024ab030430_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab030440 Zm00024ab030440_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab030440 Zm00024ab030440_P001 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab030740 Zm00024ab030740_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab030740 Zm00024ab030740_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab030740 Zm00024ab030740_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab030740 Zm00024ab030740_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab030740 Zm00024ab030740_P001 excluded MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5464 EC-2.4.1.131 Zm00024ab030770 Zm00024ab030770_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab030850 Zm00024ab030850_P003 ubiquitous PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab031020 Zm00024ab031020_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab031100 Zm00024ab031100_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab031100 Zm00024ab031100_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab031130 Zm00024ab031130_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab031140 Zm00024ab031140_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab031280 Zm00024ab031280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab031280 Zm00024ab031280_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab031280 Zm00024ab031280_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab031280 Zm00024ab031280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab031280 Zm00024ab031280_P001 viridiplantae PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab031390 Zm00024ab031390_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab031390 Zm00024ab031390_P002 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab031390 Zm00024ab031390_P003 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab031390 Zm00024ab031390_P004 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab031390 Zm00024ab031390_P005 conditional NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00024ab031430 Zm00024ab031430_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00024ab031430 Zm00024ab031430_P002 expected PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00024ab031540 Zm00024ab031540_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab031610 Zm00024ab031610_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab031610 Zm00024ab031610_P001 ubiquitous LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab031830 Zm00024ab031830_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab031830 Zm00024ab031830_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab031890 Zm00024ab031890_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab031890 Zm00024ab031890_P002 ubiquitous PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab031930 Zm00024ab031930_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab031930 Zm00024ab031930_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab031930 Zm00024ab031930_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab032140 Zm00024ab032140_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab032290 Zm00024ab032290_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab032290 Zm00024ab032290_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00024ab032330 Zm00024ab032330_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab032450 Zm00024ab032450_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab032460 Zm00024ab032460_P001 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab032510 Zm00024ab032510_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab032850 Zm00024ab032850_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab032890 Zm00024ab032890_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P004 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab032940 Zm00024ab032940_P005 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00024ab033080 Zm00024ab033080_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00024ab033080 Zm00024ab033080_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab033390 Zm00024ab033390_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab033390 Zm00024ab033390_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab033490 Zm00024ab033490_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab033490 Zm00024ab033490_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab033490 Zm00024ab033490_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab033580 Zm00024ab033580_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab033590 Zm00024ab033590_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab033610 Zm00024ab033610_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab033710 Zm00024ab033710_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab033710 Zm00024ab033710_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab033890 Zm00024ab033890_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab034070 Zm00024ab034070_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00024ab034270 Zm00024ab034270_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00024ab034270 Zm00024ab034270_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00024ab034270 Zm00024ab034270_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00024ab034270 Zm00024ab034270_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab034630 Zm00024ab034630_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab034760 Zm00024ab034760_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab034950 Zm00024ab034950_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P001 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00024ab034950 Zm00024ab034950_P001 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab034950 Zm00024ab034950_P002 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P002 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P002 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00024ab034950 Zm00024ab034950_P002 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab034950 Zm00024ab034950_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab034950 Zm00024ab034950_P003 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P003 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P003 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00024ab034950 Zm00024ab034950_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab034950 Zm00024ab034950_P004 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P004 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab034950 Zm00024ab034950_P004 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab035000 Zm00024ab035000_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab035020 Zm00024ab035020_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab035020 Zm00024ab035020_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab035020 Zm00024ab035020_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035020 Zm00024ab035020_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035020 Zm00024ab035020_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035020 Zm00024ab035020_P001 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00024ab035020 Zm00024ab035020_P001 NA PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035130 Zm00024ab035130_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035130 Zm00024ab035130_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00024ab035130 Zm00024ab035130_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab035250 Zm00024ab035250_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab035250 Zm00024ab035250_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab035250 Zm00024ab035250_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab035360 Zm00024ab035360_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab035380 Zm00024ab035380_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab035380 Zm00024ab035380_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab035380 Zm00024ab035380_P003 conditional PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00024ab035550 Zm00024ab035550_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab035730 Zm00024ab035730_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab035790 Zm00024ab035790_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab035790 Zm00024ab035790_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab035880 Zm00024ab035880_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab035970 Zm00024ab035970_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab036040 Zm00024ab036040_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab036040 Zm00024ab036040_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab036080 Zm00024ab036080_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab036080 Zm00024ab036080_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab036080 Zm00024ab036080_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab036430 Zm00024ab036430_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab036650 Zm00024ab036650_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab036690 Zm00024ab036690_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab036740 Zm00024ab036740_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab036750 Zm00024ab036750_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab036870 Zm00024ab036870_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab037020 Zm00024ab037020_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab037020 Zm00024ab037020_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab037020 Zm00024ab037020_P003 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab037110 Zm00024ab037110_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab037110 Zm00024ab037110_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab037110 Zm00024ab037110_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab037110 Zm00024ab037110_P001 expected PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00024ab037170 Zm00024ab037170_P001 viridiplantae PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00024ab037170 Zm00024ab037170_P002 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab037210 Zm00024ab037210_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab037210 Zm00024ab037210_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab037210 Zm00024ab037210_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab037210 Zm00024ab037210_P004 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab037260 Zm00024ab037260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab037260 Zm00024ab037260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab037260 Zm00024ab037260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P006 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab037430 Zm00024ab037430_P007 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab037450 Zm00024ab037450_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab037460 Zm00024ab037460_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab037460 Zm00024ab037460_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab037460 Zm00024ab037460_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab037710 Zm00024ab037710_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab037820 Zm00024ab037820_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab037830 Zm00024ab037830_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab037870 Zm00024ab037870_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab037870 Zm00024ab037870_P001 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab037870 Zm00024ab037870_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab037870 Zm00024ab037870_P002 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab037870 Zm00024ab037870_P004 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab037870 Zm00024ab037870_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab038000 Zm00024ab038000_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab038070 Zm00024ab038070_P001 excluded PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00024ab038100 Zm00024ab038100_P004 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab038320 Zm00024ab038320_P001 expected PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00024ab038460 Zm00024ab038460_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab038480 Zm00024ab038480_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab038530 Zm00024ab038530_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab038530 Zm00024ab038530_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab038550 Zm00024ab038550_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab038550 Zm00024ab038550_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab038550 Zm00024ab038550_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab038550 Zm00024ab038550_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab038560 Zm00024ab038560_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab038560 Zm00024ab038560_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab038560 Zm00024ab038560_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab038560 Zm00024ab038560_P001 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab038800 Zm00024ab038800_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab038800 Zm00024ab038800_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab038800 Zm00024ab038800_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab038800 Zm00024ab038800_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab038820 Zm00024ab038820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab038820 Zm00024ab038820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab038820 Zm00024ab038820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab038840 Zm00024ab038840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab038840 Zm00024ab038840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab038840 Zm00024ab038840_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab038880 Zm00024ab038880_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab038880 Zm00024ab038880_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab038880 Zm00024ab038880_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab038880 Zm00024ab038880_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab038910 Zm00024ab038910_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038910 Zm00024ab038910_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab038910 Zm00024ab038910_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038910 Zm00024ab038910_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab038920 Zm00024ab038920_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038920 Zm00024ab038920_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab038920 Zm00024ab038920_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038920 Zm00024ab038920_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab038940 Zm00024ab038940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038940 Zm00024ab038940_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab038940 Zm00024ab038940_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab038940 Zm00024ab038940_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab039090 Zm00024ab039090_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab039210 Zm00024ab039210_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab039240 Zm00024ab039240_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab039260 Zm00024ab039260_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab039260 Zm00024ab039260_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab039270 Zm00024ab039270_P001 NA PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00024ab039280 Zm00024ab039280_P001 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00024ab039280 Zm00024ab039280_P002 expected PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab039390 Zm00024ab039390_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab039390 Zm00024ab039390_P002 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab039510 Zm00024ab039510_P002 NA PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab039580 Zm00024ab039580_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab039580 Zm00024ab039580_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab039600 Zm00024ab039600_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab039600 Zm00024ab039600_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab039600 Zm00024ab039600_P001 manual PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00024ab039600 Zm00024ab039600_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00024ab039600 Zm00024ab039600_P001 manual PWY-7048 malate-oxaloacetate shuttle II MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00024ab039600 Zm00024ab039600_P001 NA DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab039660 Zm00024ab039660_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab039740 Zm00024ab039740_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab039740 Zm00024ab039740_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab039740 Zm00024ab039740_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab039740 Zm00024ab039740_P001 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab039760 Zm00024ab039760_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab039760 Zm00024ab039760_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab039760 Zm00024ab039760_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab039760 Zm00024ab039760_P002 viridiplantae PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00024ab039800 Zm00024ab039800_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00024ab039800 Zm00024ab039800_P001 expected PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00024ab039800 Zm00024ab039800_P002 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00024ab039800 Zm00024ab039800_P002 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab039980 Zm00024ab039980_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab039980 Zm00024ab039980_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00024ab039980 Zm00024ab039980_P001 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab039990 Zm00024ab039990_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab039990 Zm00024ab039990_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab040000 Zm00024ab040000_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab040000 Zm00024ab040000_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab040040 Zm00024ab040040_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab040040 Zm00024ab040040_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab040040 Zm00024ab040040_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab040040 Zm00024ab040040_P002 viridiplantae PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00024ab040080 Zm00024ab040080_P001 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00024ab040120 Zm00024ab040120_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00024ab040120 Zm00024ab040120_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00024ab040240 Zm00024ab040240_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00024ab040240 Zm00024ab040240_P001 NA PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00024ab040600 Zm00024ab040600_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab040610 Zm00024ab040610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab040610 Zm00024ab040610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab040610 Zm00024ab040610_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab040680 Zm00024ab040680_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab040740 Zm00024ab040740_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00024ab040960 Zm00024ab040960_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab040990 Zm00024ab040990_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab041220 Zm00024ab041220_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab041220 Zm00024ab041220_P002 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab041320 Zm00024ab041320_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab041320 Zm00024ab041320_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab041320 Zm00024ab041320_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab041320 Zm00024ab041320_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab041380 Zm00024ab041380_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab041470 Zm00024ab041470_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab041560 Zm00024ab041560_P001 conditional PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P001 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P001 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P001 NA PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P002 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P002 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00024ab041600 Zm00024ab041600_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00024ab041640 Zm00024ab041640_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00024ab041640 Zm00024ab041640_P001 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab041710 Zm00024ab041710_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab041720 Zm00024ab041720_P001 expected PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab041790 Zm00024ab041790_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00024ab041850 Zm00024ab041850_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00024ab041850 Zm00024ab041850_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00024ab041850 Zm00024ab041850_P002 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00024ab041850 Zm00024ab041850_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab041850 Zm00024ab041850_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab041850 Zm00024ab041850_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab041850 Zm00024ab041850_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab041860 Zm00024ab041860_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab041880 Zm00024ab041880_P003 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab042130 Zm00024ab042130_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab042130 Zm00024ab042130_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab042130 Zm00024ab042130_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab042130 Zm00024ab042130_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab042150 Zm00024ab042150_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab042150 Zm00024ab042150_P002 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab042190 Zm00024ab042190_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab042190 Zm00024ab042190_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab042190 Zm00024ab042190_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab042190 Zm00024ab042190_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab042210 Zm00024ab042210_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab042250 Zm00024ab042250_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab042250 Zm00024ab042250_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab042370 Zm00024ab042370_P001 expected PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00024ab042730 Zm00024ab042730_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab042740 Zm00024ab042740_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab042840 Zm00024ab042840_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab042840 Zm00024ab042840_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab043140 Zm00024ab043140_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab043150 Zm00024ab043150_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab043150 Zm00024ab043150_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab043150 Zm00024ab043150_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab043230 Zm00024ab043230_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab043230 Zm00024ab043230_P002 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab043270 Zm00024ab043270_P004 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab043570 Zm00024ab043570_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab043640 Zm00024ab043640_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab043650 Zm00024ab043650_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab043650 Zm00024ab043650_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab043660 Zm00024ab043660_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab043810 Zm00024ab043810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab043810 Zm00024ab043810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab043810 Zm00024ab043810_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab043820 Zm00024ab043820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab043820 Zm00024ab043820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab043820 Zm00024ab043820_P001 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab043890 Zm00024ab043890_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab043890 Zm00024ab043890_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab044200 Zm00024ab044200_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab044200 Zm00024ab044200_P001 conditional PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab044500 Zm00024ab044500_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab044720 Zm00024ab044720_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab044820 Zm00024ab044820_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab044820 Zm00024ab044820_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab044820 Zm00024ab044820_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00024ab044840 Zm00024ab044840_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00024ab044840 Zm00024ab044840_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00024ab044840 Zm00024ab044840_P001 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab044890 Zm00024ab044890_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab044960 Zm00024ab044960_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab044960 Zm00024ab044960_P001 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab045230 Zm00024ab045230_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab045250 Zm00024ab045250_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab045260 Zm00024ab045260_P001 viridiplantae PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab045280 Zm00024ab045280_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab045330 Zm00024ab045330_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P003 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P004 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P004 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P004 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P005 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P005 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P005 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P006 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P006 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P006 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P006 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab045440 Zm00024ab045440_P006 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045570 Zm00024ab045570_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045570 Zm00024ab045570_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045570 Zm00024ab045570_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045570 Zm00024ab045570_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045580 Zm00024ab045580_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045580 Zm00024ab045580_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab045580 Zm00024ab045580_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab046120 Zm00024ab046120_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab046120 Zm00024ab046120_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab046120 Zm00024ab046120_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab046120 Zm00024ab046120_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab046440 Zm00024ab046440_P002 NA PWY-7985 oxalate degradation VI OXALATE--COA-LIGASE-RXN EC-6.2.1.8 Zm00024ab046480 Zm00024ab046480_P001 NA PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P005 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P006 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P006 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P006 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P006 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P007 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P007 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P007 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab046490 Zm00024ab046490_P007 ubiquitous PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046690 Zm00024ab046690_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046690 Zm00024ab046690_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046690 Zm00024ab046690_P003 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046690 Zm00024ab046690_P004 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046700 Zm00024ab046700_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab046700 Zm00024ab046700_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab046790 Zm00024ab046790_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab046790 Zm00024ab046790_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab046790 Zm00024ab046790_P001 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab047130 Zm00024ab047130_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab047130 Zm00024ab047130_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab047160 Zm00024ab047160_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab047510 Zm00024ab047510_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab047590 Zm00024ab047590_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab047900 Zm00024ab047900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab047900 Zm00024ab047900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab047900 Zm00024ab047900_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00024ab047940 Zm00024ab047940_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab047980 Zm00024ab047980_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab047980 Zm00024ab047980_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab047980 Zm00024ab047980_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab047980 Zm00024ab047980_P002 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab047990 Zm00024ab047990_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab048060 Zm00024ab048060_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab048060 Zm00024ab048060_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab048400 Zm00024ab048400_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab048400 Zm00024ab048400_P002 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab048430 Zm00024ab048430_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab048540 Zm00024ab048540_P001 ubiquitous PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00024ab048550 Zm00024ab048550_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00024ab048550 Zm00024ab048550_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab048730 Zm00024ab048730_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab048740 Zm00024ab048740_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab048750 Zm00024ab048750_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab048750 Zm00024ab048750_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab048750 Zm00024ab048750_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P002 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P003 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P003 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P004 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P004 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab048760 Zm00024ab048760_P004 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab048820 Zm00024ab048820_P001 viridiplantae PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab048830 Zm00024ab048830_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab048830 Zm00024ab048830_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab048830 Zm00024ab048830_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab048860 Zm00024ab048860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab048860 Zm00024ab048860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab048860 Zm00024ab048860_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab048930 Zm00024ab048930_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab048930 Zm00024ab048930_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab048930 Zm00024ab048930_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab048930 Zm00024ab048930_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab049020 Zm00024ab049020_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab049020 Zm00024ab049020_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab049020 Zm00024ab049020_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab049020 Zm00024ab049020_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab049050 Zm00024ab049050_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab049050 Zm00024ab049050_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab049050 Zm00024ab049050_P003 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab049080 Zm00024ab049080_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab049110 Zm00024ab049110_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab049110 Zm00024ab049110_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab049110 Zm00024ab049110_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab049210 Zm00024ab049210_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab049210 Zm00024ab049210_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab049210 Zm00024ab049210_P001 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab049400 Zm00024ab049400_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab049400 Zm00024ab049400_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00024ab049440 Zm00024ab049440_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00024ab049440 Zm00024ab049440_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00024ab049450 Zm00024ab049450_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00024ab049450 Zm00024ab049450_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab049600 Zm00024ab049600_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab049600 Zm00024ab049600_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab049600 Zm00024ab049600_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab049700 Zm00024ab049700_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab049700 Zm00024ab049700_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab049700 Zm00024ab049700_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab049700 Zm00024ab049700_P002 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00024ab050170 Zm00024ab050170_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00024ab050170 Zm00024ab050170_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00024ab050170 Zm00024ab050170_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab050490 Zm00024ab050490_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab050490 Zm00024ab050490_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab050490 Zm00024ab050490_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab050490 Zm00024ab050490_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00024ab050490 Zm00024ab050490_P001 NA PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab050870 Zm00024ab050870_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab050890 Zm00024ab050890_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab050890 Zm00024ab050890_P002 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab050900 Zm00024ab050900_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab051240 Zm00024ab051240_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab051280 Zm00024ab051280_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab051280 Zm00024ab051280_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab051280 Zm00024ab051280_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab051280 Zm00024ab051280_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00024ab051320 Zm00024ab051320_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab051330 Zm00024ab051330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab051330 Zm00024ab051330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab051330 Zm00024ab051330_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab051340 Zm00024ab051340_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab051490 Zm00024ab051490_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab051610 Zm00024ab051610_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab051610 Zm00024ab051610_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab051610 Zm00024ab051610_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab051610 Zm00024ab051610_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab051620 Zm00024ab051620_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab051620 Zm00024ab051620_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab051620 Zm00024ab051620_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab051620 Zm00024ab051620_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab051890 Zm00024ab051890_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab051940 Zm00024ab051940_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab052050 Zm00024ab052050_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab052060 Zm00024ab052060_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab052280 Zm00024ab052280_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab052280 Zm00024ab052280_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab052280 Zm00024ab052280_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab052280 Zm00024ab052280_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00024ab052290 Zm00024ab052290_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00024ab052290 Zm00024ab052290_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00024ab052290 Zm00024ab052290_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00024ab052290 Zm00024ab052290_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00024ab052480 Zm00024ab052480_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00024ab052480 Zm00024ab052480_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00024ab052480 Zm00024ab052480_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00024ab052480 Zm00024ab052480_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab052630 Zm00024ab052630_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab052630 Zm00024ab052630_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab052630 Zm00024ab052630_P001 conditional PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00024ab052730 Zm00024ab052730_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00024ab052730 Zm00024ab052730_P002 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00024ab052730 Zm00024ab052730_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab052740 Zm00024ab052740_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab052880 Zm00024ab052880_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab052880 Zm00024ab052880_P001 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab052890 Zm00024ab052890_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab052890 Zm00024ab052890_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab052890 Zm00024ab052890_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab052890 Zm00024ab052890_P001 viridiplantae PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DUTP-PYROP-RXN EC-3.6.1.23 Zm00024ab052990 Zm00024ab052990_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DUTP-PYROP-RXN EC-3.6.1.23 Zm00024ab052990 Zm00024ab052990_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DUTP-PYROP-RXN EC-3.6.1.23 Zm00024ab052990 Zm00024ab052990_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DUTP-PYROP-RXN EC-3.6.1.23 Zm00024ab052990 Zm00024ab052990_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab053370 Zm00024ab053370_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab053370 Zm00024ab053370_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab053370 Zm00024ab053370_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab053480 Zm00024ab053480_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab053620 Zm00024ab053620_P003 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab053720 Zm00024ab053720_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab053720 Zm00024ab053720_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab053720 Zm00024ab053720_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab053770 Zm00024ab053770_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab053780 Zm00024ab053780_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab053780 Zm00024ab053780_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab053870 Zm00024ab053870_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab053920 Zm00024ab053920_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00024ab053930 Zm00024ab053930_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab054170 Zm00024ab054170_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00024ab054230 Zm00024ab054230_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00024ab054230 Zm00024ab054230_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00024ab054260 Zm00024ab054260_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00024ab054260 Zm00024ab054260_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00024ab054260 Zm00024ab054260_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00024ab054260 Zm00024ab054260_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab054290 Zm00024ab054290_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab054300 Zm00024ab054300_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab054330 Zm00024ab054330_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab054330 Zm00024ab054330_P002 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab054420 Zm00024ab054420_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab054420 Zm00024ab054420_P002 viridiplantae PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00024ab054570 Zm00024ab054570_P001 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00024ab054570 Zm00024ab054570_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab054850 Zm00024ab054850_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab054850 Zm00024ab054850_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab054950 Zm00024ab054950_P001 NA PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab054960 Zm00024ab054960_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab054960 Zm00024ab054960_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00024ab054970 Zm00024ab054970_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P004 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P004 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P004 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P005 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P005 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab055000 Zm00024ab055000_P005 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab055070 Zm00024ab055070_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab055110 Zm00024ab055110_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab055110 Zm00024ab055110_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab055110 Zm00024ab055110_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055170 Zm00024ab055170_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055170 Zm00024ab055170_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055170 Zm00024ab055170_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055170 Zm00024ab055170_P002 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055210 Zm00024ab055210_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055210 Zm00024ab055210_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055210 Zm00024ab055210_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055220 Zm00024ab055220_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055220 Zm00024ab055220_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055220 Zm00024ab055220_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab055230 Zm00024ab055230_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab055380 Zm00024ab055380_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab055470 Zm00024ab055470_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab055470 Zm00024ab055470_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab055470 Zm00024ab055470_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab055470 Zm00024ab055470_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab055470 Zm00024ab055470_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab055470 Zm00024ab055470_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab055470 Zm00024ab055470_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab055470 Zm00024ab055470_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab055480 Zm00024ab055480_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab055480 Zm00024ab055480_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab055480 Zm00024ab055480_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab055480 Zm00024ab055480_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab055650 Zm00024ab055650_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab055850 Zm00024ab055850_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab055950 Zm00024ab055950_P001 conditional PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab055970 Zm00024ab055970_P001 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00024ab056140 Zm00024ab056140_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00024ab056140 Zm00024ab056140_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab056250 Zm00024ab056250_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab056250 Zm00024ab056250_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab056310 Zm00024ab056310_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab056310 Zm00024ab056310_P002 viridiplantae PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab056370 Zm00024ab056370_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab056680 Zm00024ab056680_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab056680 Zm00024ab056680_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab056680 Zm00024ab056680_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab056680 Zm00024ab056680_P002 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab056690 Zm00024ab056690_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab056690 Zm00024ab056690_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab056690 Zm00024ab056690_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab056690 Zm00024ab056690_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab056690 Zm00024ab056690_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab056690 Zm00024ab056690_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab056780 Zm00024ab056780_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab056780 Zm00024ab056780_P001 NA PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab057010 Zm00024ab057010_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-884 EC-1.17.7.4 Zm00024ab057030 Zm00024ab057030_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-884 EC-1.17.7.4 Zm00024ab057030 Zm00024ab057030_P001 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab057140 Zm00024ab057140_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab057140 Zm00024ab057140_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab057140 Zm00024ab057140_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab057180 Zm00024ab057180_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab057180 Zm00024ab057180_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab057180 Zm00024ab057180_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab057180 Zm00024ab057180_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab057190 Zm00024ab057190_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab057190 Zm00024ab057190_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab057190 Zm00024ab057190_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab057190 Zm00024ab057190_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00024ab057310 Zm00024ab057310_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab057320 Zm00024ab057320_P005 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab057360 Zm00024ab057360_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab057360 Zm00024ab057360_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab057360 Zm00024ab057360_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab057360 Zm00024ab057360_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab057360 Zm00024ab057360_P001 excluded PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00024ab057430 Zm00024ab057430_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab057570 Zm00024ab057570_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab057620 Zm00024ab057620_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab057650 Zm00024ab057650_P002 expected PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab057730 Zm00024ab057730_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab057730 Zm00024ab057730_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab057730 Zm00024ab057730_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00024ab057730 Zm00024ab057730_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00024ab057730 Zm00024ab057730_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00024ab057730 Zm00024ab057730_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab057740 Zm00024ab057740_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab057740 Zm00024ab057740_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab057740 Zm00024ab057740_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab058090 Zm00024ab058090_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab058090 Zm00024ab058090_P001 ubiquitous PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00024ab058510 Zm00024ab058510_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab058520 Zm00024ab058520_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab058530 Zm00024ab058530_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab058530 Zm00024ab058530_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab058530 Zm00024ab058530_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab058530 Zm00024ab058530_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab058530 Zm00024ab058530_P005 expected PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00024ab058560 Zm00024ab058560_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00024ab058560 Zm00024ab058560_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab059010 Zm00024ab059010_P002 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab059130 Zm00024ab059130_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab059320 Zm00024ab059320_P001 expected PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab059350 Zm00024ab059350_P001 excluded PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00024ab059420 Zm00024ab059420_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00024ab059420 Zm00024ab059420_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab059460 Zm00024ab059460_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab059620 Zm00024ab059620_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab059620 Zm00024ab059620_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab059620 Zm00024ab059620_P003 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab059620 Zm00024ab059620_P004 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab059810 Zm00024ab059810_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab059880 Zm00024ab059880_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab059900 Zm00024ab059900_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab059910 Zm00024ab059910_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00024ab059970 Zm00024ab059970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab059980 Zm00024ab059980_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab060010 Zm00024ab060010_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab060100 Zm00024ab060100_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00024ab060340 Zm00024ab060340_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00024ab060340 Zm00024ab060340_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00024ab060340 Zm00024ab060340_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab060360 Zm00024ab060360_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab060360 Zm00024ab060360_P001 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab060590 Zm00024ab060590_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab060590 Zm00024ab060590_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab060590 Zm00024ab060590_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab060590 Zm00024ab060590_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab060650 Zm00024ab060650_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab060670 Zm00024ab060670_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab060730 Zm00024ab060730_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab060730 Zm00024ab060730_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab060730 Zm00024ab060730_P001 conditional PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00024ab060740 Zm00024ab060740_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab061010 Zm00024ab061010_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab061020 Zm00024ab061020_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab061020 Zm00024ab061020_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab061080 Zm00024ab061080_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab061140 Zm00024ab061140_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab061150 Zm00024ab061150_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00024ab061420 Zm00024ab061420_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00024ab061440 Zm00024ab061440_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P001 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P001 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P001 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P002 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P002 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P002 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P003 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P003 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P003 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P004 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00024ab061450 Zm00024ab061450_P004 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab061450 Zm00024ab061450_P004 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab061660 Zm00024ab061660_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab061660 Zm00024ab061660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab061660 Zm00024ab061660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab061660 Zm00024ab061660_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P003 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061710 Zm00024ab061710_P003 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061720 Zm00024ab061720_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab061720 Zm00024ab061720_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab061940 Zm00024ab061940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab061970 Zm00024ab061970_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab062020 Zm00024ab062020_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00024ab062250 Zm00024ab062250_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00024ab062250 Zm00024ab062250_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab062280 Zm00024ab062280_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P003 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P004 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab062290 Zm00024ab062290_P004 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab062400 Zm00024ab062400_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab062430 Zm00024ab062430_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab062610 Zm00024ab062610_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab062710 Zm00024ab062710_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab062710 Zm00024ab062710_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab062710 Zm00024ab062710_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab062710 Zm00024ab062710_P004 expected PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00024ab062760 Zm00024ab062760_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab062860 Zm00024ab062860_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00024ab062990 Zm00024ab062990_P001 viridiplantae PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P001 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P001 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P002 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P002 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P003 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00024ab063130 Zm00024ab063130_P003 excluded PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab063310 Zm00024ab063310_P002 NA UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab063430 Zm00024ab063430_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab063440 Zm00024ab063440_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00024ab063520 Zm00024ab063520_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab063860 Zm00024ab063860_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00024ab063920 Zm00024ab063920_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00024ab063920 Zm00024ab063920_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab063980 Zm00024ab063980_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab064110 Zm00024ab064110_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab064120 Zm00024ab064120_P001 ubiquitous PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00024ab064140 Zm00024ab064140_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab064160 Zm00024ab064160_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab064270 Zm00024ab064270_P001 expected PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab064280 Zm00024ab064280_P001 viridiplantae PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00024ab064330 Zm00024ab064330_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00024ab064330 Zm00024ab064330_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab064340 Zm00024ab064340_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab064340 Zm00024ab064340_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab064340 Zm00024ab064340_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab064340 Zm00024ab064340_P001 NA PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P001 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P001 expected PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P002 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00024ab064350 Zm00024ab064350_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab064460 Zm00024ab064460_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab064750 Zm00024ab064750_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab064750 Zm00024ab064750_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab064810 Zm00024ab064810_P003 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00024ab065020 Zm00024ab065020_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00024ab065020 Zm00024ab065020_P001 expected PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab065050 Zm00024ab065050_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00024ab065160 Zm00024ab065160_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00024ab065160 Zm00024ab065160_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00024ab065160 Zm00024ab065160_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab065260 Zm00024ab065260_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab065290 Zm00024ab065290_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab065290 Zm00024ab065290_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab065290 Zm00024ab065290_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab065290 Zm00024ab065290_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab065290 Zm00024ab065290_P005 expected PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P002 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P003 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P003 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab065460 Zm00024ab065460_P003 NA PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab065470 Zm00024ab065470_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab065470 Zm00024ab065470_P002 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00024ab065570 Zm00024ab065570_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00024ab065570 Zm00024ab065570_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab065590 Zm00024ab065590_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab065590 Zm00024ab065590_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab065590 Zm00024ab065590_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab065590 Zm00024ab065590_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab065650 Zm00024ab065650_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab065710 Zm00024ab065710_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab065710 Zm00024ab065710_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab065710 Zm00024ab065710_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab065710 Zm00024ab065710_P002 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab065720 Zm00024ab065720_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab065720 Zm00024ab065720_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab065720 Zm00024ab065720_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab065720 Zm00024ab065720_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00024ab065720 Zm00024ab065720_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab065750 Zm00024ab065750_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00024ab065760 Zm00024ab065760_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00024ab065760 Zm00024ab065760_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab065790 Zm00024ab065790_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab065810 Zm00024ab065810_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab065810 Zm00024ab065810_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab065810 Zm00024ab065810_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab065810 Zm00024ab065810_P002 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab065830 Zm00024ab065830_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab065830 Zm00024ab065830_P002 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00024ab065960 Zm00024ab065960_P001 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab066060 Zm00024ab066060_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab066270 Zm00024ab066270_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab066340 Zm00024ab066340_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab066370 Zm00024ab066370_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab066370 Zm00024ab066370_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab066370 Zm00024ab066370_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab066680 Zm00024ab066680_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab066830 Zm00024ab066830_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab066830 Zm00024ab066830_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab067080 Zm00024ab067080_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab067080 Zm00024ab067080_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab067080 Zm00024ab067080_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab067080 Zm00024ab067080_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab067100 Zm00024ab067100_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab067180 Zm00024ab067180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab067180 Zm00024ab067180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab067180 Zm00024ab067180_P001 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab067220 Zm00024ab067220_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab067220 Zm00024ab067220_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab067220 Zm00024ab067220_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab067220 Zm00024ab067220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab067310 Zm00024ab067310_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab067360 Zm00024ab067360_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab067400 Zm00024ab067400_P001 viridiplantae PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00024ab067510 Zm00024ab067510_P001 conditional PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00024ab067510 Zm00024ab067510_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab067670 Zm00024ab067670_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab067700 Zm00024ab067700_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab067700 Zm00024ab067700_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab067700 Zm00024ab067700_P003 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab067720 Zm00024ab067720_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab067740 Zm00024ab067740_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab067760 Zm00024ab067760_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab067760 Zm00024ab067760_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab067760 Zm00024ab067760_P003 viridiplantae PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00024ab067790 Zm00024ab067790_P001 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00024ab067790 Zm00024ab067790_P002 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00024ab067790 Zm00024ab067790_P003 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab067880 Zm00024ab067880_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab067880 Zm00024ab067880_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab067880 Zm00024ab067880_P001 conditional PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab067950 Zm00024ab067950_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab067960 Zm00024ab067960_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068070 Zm00024ab068070_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068070 Zm00024ab068070_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab068070 Zm00024ab068070_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab068070 Zm00024ab068070_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068080 Zm00024ab068080_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068080 Zm00024ab068080_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab068080 Zm00024ab068080_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab068080 Zm00024ab068080_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab068240 Zm00024ab068240_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab068240 Zm00024ab068240_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab068250 Zm00024ab068250_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab068260 Zm00024ab068260_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab068370 Zm00024ab068370_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab068380 Zm00024ab068380_P001 expected PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab068390 Zm00024ab068390_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab068390 Zm00024ab068390_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab068390 Zm00024ab068390_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab068390 Zm00024ab068390_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P002 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P003 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P003 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab068400 Zm00024ab068400_P003 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00024ab068500 Zm00024ab068500_P001 viridiplantae PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00024ab068530 Zm00024ab068530_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab068730 Zm00024ab068730_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab068730 Zm00024ab068730_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab068850 Zm00024ab068850_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab068850 Zm00024ab068850_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab068850 Zm00024ab068850_P003 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab068850 Zm00024ab068850_P004 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab068850 Zm00024ab068850_P005 NA PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab068860 Zm00024ab068860_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P004 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab068860 Zm00024ab068860_P004 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00024ab068880 Zm00024ab068880_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab068890 Zm00024ab068890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab068890 Zm00024ab068890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab068890 Zm00024ab068890_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab068920 Zm00024ab068920_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00024ab069260 Zm00024ab069260_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab069330 Zm00024ab069330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab069330 Zm00024ab069330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab069330 Zm00024ab069330_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab069350 Zm00024ab069350_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab069440 Zm00024ab069440_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab069500 Zm00024ab069500_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab069520 Zm00024ab069520_P001 expected PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00024ab069710 Zm00024ab069710_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab069920 Zm00024ab069920_P002 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab069940 Zm00024ab069940_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00024ab070090 Zm00024ab070090_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00024ab070090 Zm00024ab070090_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab070350 Zm00024ab070350_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab070500 Zm00024ab070500_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab070500 Zm00024ab070500_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab070680 Zm00024ab070680_P001 NA PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab071110 Zm00024ab071110_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab071200 Zm00024ab071200_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00024ab071230 Zm00024ab071230_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00024ab071230 Zm00024ab071230_P002 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab071250 Zm00024ab071250_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab071250 Zm00024ab071250_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab071250 Zm00024ab071250_P003 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab071250 Zm00024ab071250_P004 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab071260 Zm00024ab071260_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab071270 Zm00024ab071270_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab071290 Zm00024ab071290_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab071290 Zm00024ab071290_P002 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab071490 Zm00024ab071490_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab071510 Zm00024ab071510_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00024ab071530 Zm00024ab071530_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00024ab071530 Zm00024ab071530_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00024ab071530 Zm00024ab071530_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00024ab071530 Zm00024ab071530_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab071720 Zm00024ab071720_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab071720 Zm00024ab071720_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab071750 Zm00024ab071750_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab071750 Zm00024ab071750_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab071750 Zm00024ab071750_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab071750 Zm00024ab071750_P001 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00024ab071790 Zm00024ab071790_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00024ab071790 Zm00024ab071790_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00024ab071790 Zm00024ab071790_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00024ab071790 Zm00024ab071790_P002 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00024ab071810 Zm00024ab071810_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00024ab071810 Zm00024ab071810_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab071830 Zm00024ab071830_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab071910 Zm00024ab071910_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab071910 Zm00024ab071910_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab071910 Zm00024ab071910_P003 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00024ab071940 Zm00024ab071940_P001 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00024ab071960 Zm00024ab071960_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00024ab071960 Zm00024ab071960_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00024ab071960 Zm00024ab071960_P002 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00024ab071960 Zm00024ab071960_P002 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00024ab071970 Zm00024ab071970_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00024ab071970 Zm00024ab071970_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab071990 Zm00024ab071990_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00024ab072030 Zm00024ab072030_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00024ab072030 Zm00024ab072030_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab072130 Zm00024ab072130_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab072140 Zm00024ab072140_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab072140 Zm00024ab072140_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab072140 Zm00024ab072140_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00024ab072140 Zm00024ab072140_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00024ab072140 Zm00024ab072140_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00024ab072140 Zm00024ab072140_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab072190 Zm00024ab072190_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P002 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P003 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P004 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P005 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00024ab072280 Zm00024ab072280_P006 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab072620 Zm00024ab072620_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab072680 Zm00024ab072680_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab072680 Zm00024ab072680_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab072810 Zm00024ab072810_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab072810 Zm00024ab072810_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab072850 Zm00024ab072850_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab072860 Zm00024ab072860_P001 viridiplantae PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00024ab072920 Zm00024ab072920_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab072920 Zm00024ab072920_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab072920 Zm00024ab072920_P001 expected PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00024ab072980 Zm00024ab072980_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab073060 Zm00024ab073060_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab073060 Zm00024ab073060_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00024ab073550 Zm00024ab073550_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00024ab073550 Zm00024ab073550_P001 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00024ab073620 Zm00024ab073620_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00024ab073620 Zm00024ab073620_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00024ab073620 Zm00024ab073620_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00024ab073620 Zm00024ab073620_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00024ab073620 Zm00024ab073620_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab073840 Zm00024ab073840_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab074050 Zm00024ab074050_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab074050 Zm00024ab074050_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab074050 Zm00024ab074050_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab074050 Zm00024ab074050_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P003 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab074240 Zm00024ab074240_P003 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab074350 Zm00024ab074350_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab074350 Zm00024ab074350_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab074350 Zm00024ab074350_P003 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab075090 Zm00024ab075090_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab075150 Zm00024ab075150_P003 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab075250 Zm00024ab075250_P001 expected PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00024ab075270 Zm00024ab075270_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab075270 Zm00024ab075270_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab075270 Zm00024ab075270_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab075300 Zm00024ab075300_P001 expected PWY-6196 D-serine metabolism 5.1.1.18-RXN EC-5.1.1.18 Zm00024ab075320 Zm00024ab075320_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00024ab075560 Zm00024ab075560_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00024ab075560 Zm00024ab075560_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13642 EC-1.13.11.68 Zm00024ab075580 Zm00024ab075580_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab075660 Zm00024ab075660_P002 NA PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00024ab075780 Zm00024ab075780_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00024ab075780 Zm00024ab075780_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab075820 Zm00024ab075820_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab075820 Zm00024ab075820_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab075820 Zm00024ab075820_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab076080 Zm00024ab076080_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab076130 Zm00024ab076130_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab076130 Zm00024ab076130_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab076480 Zm00024ab076480_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab076480 Zm00024ab076480_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab076680 Zm00024ab076680_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab076680 Zm00024ab076680_P002 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab076690 Zm00024ab076690_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab076690 Zm00024ab076690_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00024ab076760 Zm00024ab076760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab077000 Zm00024ab077000_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077140 Zm00024ab077140_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077150 Zm00024ab077150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077150 Zm00024ab077150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077150 Zm00024ab077150_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077160 Zm00024ab077160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077160 Zm00024ab077160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077160 Zm00024ab077160_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077170 Zm00024ab077170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077170 Zm00024ab077170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077170 Zm00024ab077170_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077210 Zm00024ab077210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077210 Zm00024ab077210_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077210 Zm00024ab077210_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab077220 Zm00024ab077220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077220 Zm00024ab077220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab077220 Zm00024ab077220_P001 conditional PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab077370 Zm00024ab077370_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab077380 Zm00024ab077380_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab077380 Zm00024ab077380_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab077500 Zm00024ab077500_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab077570 Zm00024ab077570_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab077600 Zm00024ab077600_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab077840 Zm00024ab077840_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab077840 Zm00024ab077840_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab078070 Zm00024ab078070_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab078070 Zm00024ab078070_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab078100 Zm00024ab078100_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab078110 Zm00024ab078110_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab078130 Zm00024ab078130_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab078300 Zm00024ab078300_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab078340 Zm00024ab078340_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab078370 Zm00024ab078370_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab078370 Zm00024ab078370_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab078370 Zm00024ab078370_P003 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab078440 Zm00024ab078440_P001 conditional PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00024ab078600 Zm00024ab078600_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab078770 Zm00024ab078770_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab078780 Zm00024ab078780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab078810 Zm00024ab078810_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab078810 Zm00024ab078810_P002 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078880 Zm00024ab078880_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078880 Zm00024ab078880_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078880 Zm00024ab078880_P003 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078890 Zm00024ab078890_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078890 Zm00024ab078890_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab078890 Zm00024ab078890_P003 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab079110 Zm00024ab079110_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab079110 Zm00024ab079110_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab079110 Zm00024ab079110_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab079120 Zm00024ab079120_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab079150 Zm00024ab079150_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab079150 Zm00024ab079150_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab079240 Zm00024ab079240_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab079330 Zm00024ab079330_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab079330 Zm00024ab079330_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab079330 Zm00024ab079330_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00024ab079340 Zm00024ab079340_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab079530 Zm00024ab079530_P002 NA ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab079660 Zm00024ab079660_P003 viridiplantae PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab079730 Zm00024ab079730_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab079730 Zm00024ab079730_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab079730 Zm00024ab079730_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab079730 Zm00024ab079730_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab079790 Zm00024ab079790_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab079790 Zm00024ab079790_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab079940 Zm00024ab079940_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab079950 Zm00024ab079950_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab079960 Zm00024ab079960_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab080190 Zm00024ab080190_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab080190 Zm00024ab080190_P001 viridiplantae PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00024ab080290 Zm00024ab080290_P001 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00024ab080490 Zm00024ab080490_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00024ab080490 Zm00024ab080490_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab080540 Zm00024ab080540_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab080540 Zm00024ab080540_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab080540 Zm00024ab080540_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab080540 Zm00024ab080540_P004 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00024ab080650 Zm00024ab080650_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab080800 Zm00024ab080800_P001 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00024ab081130 Zm00024ab081130_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab081170 Zm00024ab081170_P001 conditional PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00024ab081230 Zm00024ab081230_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab081580 Zm00024ab081580_P001 expected HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab081680 Zm00024ab081680_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab081690 Zm00024ab081690_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab081730 Zm00024ab081730_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab081730 Zm00024ab081730_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab081730 Zm00024ab081730_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab081760 Zm00024ab081760_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab081760 Zm00024ab081760_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab081820 Zm00024ab081820_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00024ab082020 Zm00024ab082020_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00024ab082020 Zm00024ab082020_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab082130 Zm00024ab082130_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab082130 Zm00024ab082130_P001 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab082170 Zm00024ab082170_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab082180 Zm00024ab082180_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab082190 Zm00024ab082190_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00024ab082230 Zm00024ab082230_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab082230 Zm00024ab082230_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab082230 Zm00024ab082230_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab082230 Zm00024ab082230_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00024ab082230 Zm00024ab082230_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00024ab082230 Zm00024ab082230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00024ab082230 Zm00024ab082230_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00024ab082330 Zm00024ab082330_P001 conditional PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P001 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab082630 Zm00024ab082630_P002 excluded PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab082770 Zm00024ab082770_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab082770 Zm00024ab082770_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab082770 Zm00024ab082770_P003 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab082790 Zm00024ab082790_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab082790 Zm00024ab082790_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab082800 Zm00024ab082800_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab082800 Zm00024ab082800_P002 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab082820 Zm00024ab082820_P001 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab082830 Zm00024ab082830_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab082830 Zm00024ab082830_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab082830 Zm00024ab082830_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00024ab083030 Zm00024ab083030_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab083110 Zm00024ab083110_P001 ubiquitous PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab083240 Zm00024ab083240_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab083240 Zm00024ab083240_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab083250 Zm00024ab083250_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab083610 Zm00024ab083610_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab083660 Zm00024ab083660_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab083700 Zm00024ab083700_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GART-RXN EC-2.1.2.2 Zm00024ab083860 Zm00024ab083860_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate GART-RXN EC-2.1.2.2 Zm00024ab083860 Zm00024ab083860_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab084040 Zm00024ab084040_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab084040 Zm00024ab084040_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab084050 Zm00024ab084050_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084080 Zm00024ab084080_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084080 Zm00024ab084080_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084080 Zm00024ab084080_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084080 Zm00024ab084080_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab084260 Zm00024ab084260_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab084300 Zm00024ab084300_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084320 Zm00024ab084320_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084320 Zm00024ab084320_P002 NA CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab084370 Zm00024ab084370_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab084370 Zm00024ab084370_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab084590 Zm00024ab084590_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab084590 Zm00024ab084590_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab084590 Zm00024ab084590_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab084590 Zm00024ab084590_P001 NA PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab084660 Zm00024ab084660_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab084800 Zm00024ab084800_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab084800 Zm00024ab084800_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab084800 Zm00024ab084800_P001 manual PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab084810 Zm00024ab084810_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab084820 Zm00024ab084820_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab084860 Zm00024ab084860_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab084960 Zm00024ab084960_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab084960 Zm00024ab084960_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab084960 Zm00024ab084960_P003 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab085030 Zm00024ab085030_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab085030 Zm00024ab085030_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab085030 Zm00024ab085030_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab085030 Zm00024ab085030_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab085050 Zm00024ab085050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab085050 Zm00024ab085050_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab085060 Zm00024ab085060_P001 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab085100 Zm00024ab085100_P002 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab085230 Zm00024ab085230_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab085230 Zm00024ab085230_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab085230 Zm00024ab085230_P003 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab085320 Zm00024ab085320_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00024ab085360 Zm00024ab085360_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00024ab085360 Zm00024ab085360_P001 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab085460 Zm00024ab085460_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab085470 Zm00024ab085470_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab085560 Zm00024ab085560_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab085560 Zm00024ab085560_P001 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab085900 Zm00024ab085900_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab085940 Zm00024ab085940_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab085940 Zm00024ab085940_P002 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00024ab086310 Zm00024ab086310_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab086320 Zm00024ab086320_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab086320 Zm00024ab086320_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab086350 Zm00024ab086350_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab086580 Zm00024ab086580_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab086580 Zm00024ab086580_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab086580 Zm00024ab086580_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab086630 Zm00024ab086630_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab086630 Zm00024ab086630_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab086630 Zm00024ab086630_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab086990 Zm00024ab086990_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab086990 Zm00024ab086990_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab087040 Zm00024ab087040_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab087060 Zm00024ab087060_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab087060 Zm00024ab087060_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab087060 Zm00024ab087060_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab087080 Zm00024ab087080_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab087080 Zm00024ab087080_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab087340 Zm00024ab087340_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab087340 Zm00024ab087340_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab087360 Zm00024ab087360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab087460 Zm00024ab087460_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab087490 Zm00024ab087490_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab087490 Zm00024ab087490_P002 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab087780 Zm00024ab087780_P001 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab087790 Zm00024ab087790_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab087790 Zm00024ab087790_P001 expected PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab088230 Zm00024ab088230_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab088230 Zm00024ab088230_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00024ab088270 Zm00024ab088270_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab088270 Zm00024ab088270_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab088270 Zm00024ab088270_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab088380 Zm00024ab088380_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab088630 Zm00024ab088630_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab088640 Zm00024ab088640_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab088790 Zm00024ab088790_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab089220 Zm00024ab089220_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab089220 Zm00024ab089220_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab089450 Zm00024ab089450_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab089960 Zm00024ab089960_P002 NA HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab089970 Zm00024ab089970_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab090020 Zm00024ab090020_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab090020 Zm00024ab090020_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00024ab090020 Zm00024ab090020_P001 conditional PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab090260 Zm00024ab090260_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00024ab090260 Zm00024ab090260_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00024ab090260 Zm00024ab090260_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab090260 Zm00024ab090260_P001 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P001 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P001 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab090350 Zm00024ab090350_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab090350 Zm00024ab090350_P002 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P002 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P002 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P003 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00024ab090350 Zm00024ab090350_P003 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab090480 Zm00024ab090480_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab090480 Zm00024ab090480_P001 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab090510 Zm00024ab090510_P001 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab090610 Zm00024ab090610_P001 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab090660 Zm00024ab090660_P001 NA PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab090690 Zm00024ab090690_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab090690 Zm00024ab090690_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P005 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P005 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P005 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P006 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P006 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab090720 Zm00024ab090720_P006 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab090820 Zm00024ab090820_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab090820 Zm00024ab090820_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab090880 Zm00024ab090880_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab091020 Zm00024ab091020_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab091020 Zm00024ab091020_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab091080 Zm00024ab091080_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab091250 Zm00024ab091250_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab091290 Zm00024ab091290_P001 expected PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00024ab091300 Zm00024ab091300_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00024ab091300 Zm00024ab091300_P001 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P002 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P003 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P003 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab091330 Zm00024ab091330_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab091540 Zm00024ab091540_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab091680 Zm00024ab091680_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab092110 Zm00024ab092110_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab092110 Zm00024ab092110_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab092280 Zm00024ab092280_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab092310 Zm00024ab092310_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab092370 Zm00024ab092370_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab092500 Zm00024ab092500_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab092600 Zm00024ab092600_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab092600 Zm00024ab092600_P002 expected PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00024ab092710 Zm00024ab092710_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab092920 Zm00024ab092920_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab092920 Zm00024ab092920_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab092920 Zm00024ab092920_P003 conditional PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab092980 Zm00024ab092980_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab092980 Zm00024ab092980_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab092990 Zm00024ab092990_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab092990 Zm00024ab092990_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab093010 Zm00024ab093010_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab093010 Zm00024ab093010_P002 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab093490 Zm00024ab093490_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab094250 Zm00024ab094250_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab094250 Zm00024ab094250_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab094440 Zm00024ab094440_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab094440 Zm00024ab094440_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab094440 Zm00024ab094440_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab094440 Zm00024ab094440_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab094740 Zm00024ab094740_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab094740 Zm00024ab094740_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab094820 Zm00024ab094820_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab094820 Zm00024ab094820_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00024ab094860 Zm00024ab094860_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab094910 Zm00024ab094910_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab095360 Zm00024ab095360_P001 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab095400 Zm00024ab095400_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab095400 Zm00024ab095400_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab095400 Zm00024ab095400_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab095400 Zm00024ab095400_P004 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00024ab095480 Zm00024ab095480_P001 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab095630 Zm00024ab095630_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab095680 Zm00024ab095680_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab096020 Zm00024ab096020_P001 viridiplantae PWY-5530 sorbitol biosynthesis II 1.1.99.28-RXN EC-1.1.99.28 Zm00024ab096320 Zm00024ab096320_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab096390 Zm00024ab096390_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab096400 Zm00024ab096400_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab096410 Zm00024ab096410_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab096410 Zm00024ab096410_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab096410 Zm00024ab096410_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab096410 Zm00024ab096410_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P001 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P002 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P002 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P003 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P003 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00024ab096450 Zm00024ab096450_P003 excluded BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab096470 Zm00024ab096470_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab096470 Zm00024ab096470_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab096560 Zm00024ab096560_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab096590 Zm00024ab096590_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab096590 Zm00024ab096590_P002 conditional PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab096720 Zm00024ab096720_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab096730 Zm00024ab096730_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab096730 Zm00024ab096730_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab096750 Zm00024ab096750_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab096750 Zm00024ab096750_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab096750 Zm00024ab096750_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab096750 Zm00024ab096750_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab096990 Zm00024ab096990_P001 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab097030 Zm00024ab097030_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab097070 Zm00024ab097070_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab097090 Zm00024ab097090_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab097090 Zm00024ab097090_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab097090 Zm00024ab097090_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab097270 Zm00024ab097270_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab097270 Zm00024ab097270_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab097270 Zm00024ab097270_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab097320 Zm00024ab097320_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab097320 Zm00024ab097320_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab097360 Zm00024ab097360_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab097460 Zm00024ab097460_P001 NA PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab097570 Zm00024ab097570_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab097690 Zm00024ab097690_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab097690 Zm00024ab097690_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab097690 Zm00024ab097690_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab097700 Zm00024ab097700_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab097700 Zm00024ab097700_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab097700 Zm00024ab097700_P001 NA PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab097750 Zm00024ab097750_P001 viridiplantae PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P001 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P001 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P002 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P002 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P003 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P003 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P004 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P004 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P005 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00024ab097770 Zm00024ab097770_P005 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab097800 Zm00024ab097800_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab097830 Zm00024ab097830_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab097840 Zm00024ab097840_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098060 Zm00024ab098060_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab098080 Zm00024ab098080_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab098280 Zm00024ab098280_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab098280 Zm00024ab098280_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab098280 Zm00024ab098280_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab098340 Zm00024ab098340_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab098340 Zm00024ab098340_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab098370 Zm00024ab098370_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab098400 Zm00024ab098400_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab098420 Zm00024ab098420_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab098470 Zm00024ab098470_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab098490 Zm00024ab098490_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab098650 Zm00024ab098650_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab098650 Zm00024ab098650_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab098690 Zm00024ab098690_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab098720 Zm00024ab098720_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab098720 Zm00024ab098720_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab098720 Zm00024ab098720_P001 ubiquitous PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab098740 Zm00024ab098740_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab098740 Zm00024ab098740_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab098740 Zm00024ab098740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab098740 Zm00024ab098740_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab098740 Zm00024ab098740_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab098760 Zm00024ab098760_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab098760 Zm00024ab098760_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab098760 Zm00024ab098760_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab098760 Zm00024ab098760_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab098760 Zm00024ab098760_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab098760 Zm00024ab098760_P006 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab099020 Zm00024ab099020_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab099020 Zm00024ab099020_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab099020 Zm00024ab099020_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab099090 Zm00024ab099090_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab099090 Zm00024ab099090_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab099090 Zm00024ab099090_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab099090 Zm00024ab099090_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab099150 Zm00024ab099150_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab099230 Zm00024ab099230_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab099230 Zm00024ab099230_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab099230 Zm00024ab099230_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab099290 Zm00024ab099290_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab099290 Zm00024ab099290_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab099290 Zm00024ab099290_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab099370 Zm00024ab099370_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab099570 Zm00024ab099570_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab099570 Zm00024ab099570_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab099570 Zm00024ab099570_P001 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab099620 Zm00024ab099620_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab099620 Zm00024ab099620_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab099620 Zm00024ab099620_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab099620 Zm00024ab099620_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab099660 Zm00024ab099660_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab099660 Zm00024ab099660_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab099670 Zm00024ab099670_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab099670 Zm00024ab099670_P001 ubiquitous PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099720 Zm00024ab099720_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099720 Zm00024ab099720_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab099720 Zm00024ab099720_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099720 Zm00024ab099720_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099730 Zm00024ab099730_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099730 Zm00024ab099730_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab099730 Zm00024ab099730_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab099730 Zm00024ab099730_P001 NA PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab099800 Zm00024ab099800_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab099800 Zm00024ab099800_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab099800 Zm00024ab099800_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab099800 Zm00024ab099800_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab099800 Zm00024ab099800_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab099800 Zm00024ab099800_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab099800 Zm00024ab099800_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab099800 Zm00024ab099800_P001 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab099840 Zm00024ab099840_P002 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab099850 Zm00024ab099850_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00024ab099880 Zm00024ab099880_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00024ab099880 Zm00024ab099880_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00024ab099880 Zm00024ab099880_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab099970 Zm00024ab099970_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab100100 Zm00024ab100100_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab100100 Zm00024ab100100_P002 NA PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00024ab100110 Zm00024ab100110_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100190 Zm00024ab100190_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100190 Zm00024ab100190_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100190 Zm00024ab100190_P003 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab100250 Zm00024ab100250_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab100250 Zm00024ab100250_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab100250 Zm00024ab100250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab100250 Zm00024ab100250_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab100250 Zm00024ab100250_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab100280 Zm00024ab100280_P001 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab100370 Zm00024ab100370_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab100450 Zm00024ab100450_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100450 Zm00024ab100450_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab100450 Zm00024ab100450_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100450 Zm00024ab100450_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab100450 Zm00024ab100450_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab100450 Zm00024ab100450_P003 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab100480 Zm00024ab100480_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab100490 Zm00024ab100490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab100680 Zm00024ab100680_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab100680 Zm00024ab100680_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab100680 Zm00024ab100680_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab100870 Zm00024ab100870_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab100870 Zm00024ab100870_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab100870 Zm00024ab100870_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab100870 Zm00024ab100870_P002 expected PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab100930 Zm00024ab100930_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab100930 Zm00024ab100930_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab101180 Zm00024ab101180_P006 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab101410 Zm00024ab101410_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab101410 Zm00024ab101410_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab101410 Zm00024ab101410_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab101460 Zm00024ab101460_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab101490 Zm00024ab101490_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab101490 Zm00024ab101490_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab101710 Zm00024ab101710_P001 expected PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab101760 Zm00024ab101760_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab101760 Zm00024ab101760_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab101950 Zm00024ab101950_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab101990 Zm00024ab101990_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab101990 Zm00024ab101990_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab102060 Zm00024ab102060_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab102100 Zm00024ab102100_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab102100 Zm00024ab102100_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab102100 Zm00024ab102100_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab102100 Zm00024ab102100_P002 expected PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab102380 Zm00024ab102380_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab102570 Zm00024ab102570_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab102570 Zm00024ab102570_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab102570 Zm00024ab102570_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab102630 Zm00024ab102630_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab102630 Zm00024ab102630_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab102630 Zm00024ab102630_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab102640 Zm00024ab102640_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab102640 Zm00024ab102640_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab102640 Zm00024ab102640_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab102650 Zm00024ab102650_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab102650 Zm00024ab102650_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab102650 Zm00024ab102650_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab102650 Zm00024ab102650_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab102710 Zm00024ab102710_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab102710 Zm00024ab102710_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab102710 Zm00024ab102710_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab102710 Zm00024ab102710_P001 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab102760 Zm00024ab102760_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab102780 Zm00024ab102780_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab102820 Zm00024ab102820_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab102820 Zm00024ab102820_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab102940 Zm00024ab102940_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab102940 Zm00024ab102940_P001 conditional ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab103050 Zm00024ab103050_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab103050 Zm00024ab103050_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab103080 Zm00024ab103080_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab103080 Zm00024ab103080_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab103240 Zm00024ab103240_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab103240 Zm00024ab103240_P002 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab103630 Zm00024ab103630_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab103630 Zm00024ab103630_P001 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab103640 Zm00024ab103640_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab103660 Zm00024ab103660_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab103710 Zm00024ab103710_P001 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab103850 Zm00024ab103850_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab103850 Zm00024ab103850_P001 excluded PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab103940 Zm00024ab103940_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab103980 Zm00024ab103980_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab103980 Zm00024ab103980_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab103980 Zm00024ab103980_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab103980 Zm00024ab103980_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab104060 Zm00024ab104060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab104060 Zm00024ab104060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab104060 Zm00024ab104060_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab104180 Zm00024ab104180_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab104180 Zm00024ab104180_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab104380 Zm00024ab104380_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab104460 Zm00024ab104460_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab104510 Zm00024ab104510_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab104510 Zm00024ab104510_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00024ab104510 Zm00024ab104510_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00024ab104510 Zm00024ab104510_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00024ab104510 Zm00024ab104510_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab104510 Zm00024ab104510_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab104540 Zm00024ab104540_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab104540 Zm00024ab104540_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab104540 Zm00024ab104540_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab104640 Zm00024ab104640_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab104660 Zm00024ab104660_P001 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab104780 Zm00024ab104780_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab104780 Zm00024ab104780_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab104780 Zm00024ab104780_P003 ubiquitous OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab105010 Zm00024ab105010_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab105010 Zm00024ab105010_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab105220 Zm00024ab105220_P001 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab105330 Zm00024ab105330_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00024ab105460 Zm00024ab105460_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00024ab105460 Zm00024ab105460_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00024ab105460 Zm00024ab105460_P003 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab105600 Zm00024ab105600_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab105680 Zm00024ab105680_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab105680 Zm00024ab105680_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab105680 Zm00024ab105680_P001 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab105760 Zm00024ab105760_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab105760 Zm00024ab105760_P001 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00024ab106080 Zm00024ab106080_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00024ab106080 Zm00024ab106080_P001 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab106290 Zm00024ab106290_P001 NA PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab106490 Zm00024ab106490_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab106500 Zm00024ab106500_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab106510 Zm00024ab106510_P001 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab106760 Zm00024ab106760_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab106760 Zm00024ab106760_P002 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab106830 Zm00024ab106830_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab106840 Zm00024ab106840_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab107150 Zm00024ab107150_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab107160 Zm00024ab107160_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab107280 Zm00024ab107280_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab107470 Zm00024ab107470_P001 conditional SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00024ab107670 Zm00024ab107670_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00024ab107670 Zm00024ab107670_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab108010 Zm00024ab108010_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab108010 Zm00024ab108010_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab108010 Zm00024ab108010_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab108010 Zm00024ab108010_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab108310 Zm00024ab108310_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab108310 Zm00024ab108310_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab108430 Zm00024ab108430_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab108430 Zm00024ab108430_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab108580 Zm00024ab108580_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab108730 Zm00024ab108730_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab108730 Zm00024ab108730_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab109060 Zm00024ab109060_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab109060 Zm00024ab109060_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab109060 Zm00024ab109060_P001 NA PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab109160 Zm00024ab109160_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab109240 Zm00024ab109240_P001 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab109310 Zm00024ab109310_P001 expected PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00024ab109320 Zm00024ab109320_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab109320 Zm00024ab109320_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab109380 Zm00024ab109380_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab109380 Zm00024ab109380_P001 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00024ab109440 Zm00024ab109440_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab109460 Zm00024ab109460_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P002 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P002 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab109460 Zm00024ab109460_P002 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab109460 Zm00024ab109460_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab109460 Zm00024ab109460_P002 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab109530 Zm00024ab109530_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab109530 Zm00024ab109530_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab109530 Zm00024ab109530_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab109530 Zm00024ab109530_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab109550 Zm00024ab109550_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab110120 Zm00024ab110120_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab110120 Zm00024ab110120_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab110120 Zm00024ab110120_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab110120 Zm00024ab110120_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab110120 Zm00024ab110120_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00024ab110280 Zm00024ab110280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00024ab110280 Zm00024ab110280_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab110630 Zm00024ab110630_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab110770 Zm00024ab110770_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab110770 Zm00024ab110770_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab110770 Zm00024ab110770_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab110770 Zm00024ab110770_P001 ubiquitous LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab110830 Zm00024ab110830_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab111040 Zm00024ab111040_P003 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab111060 Zm00024ab111060_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab111060 Zm00024ab111060_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab111060 Zm00024ab111060_P003 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab111130 Zm00024ab111130_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab111130 Zm00024ab111130_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab111130 Zm00024ab111130_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab111130 Zm00024ab111130_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab111240 Zm00024ab111240_P004 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P005 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab111260 Zm00024ab111260_P006 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab111350 Zm00024ab111350_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab111440 Zm00024ab111440_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab111440 Zm00024ab111440_P002 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab111500 Zm00024ab111500_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab111570 Zm00024ab111570_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00024ab111590 Zm00024ab111590_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00024ab111590 Zm00024ab111590_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab111630 Zm00024ab111630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111630 Zm00024ab111630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111630 Zm00024ab111630_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab111650 Zm00024ab111650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111650 Zm00024ab111650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111650 Zm00024ab111650_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab111660 Zm00024ab111660_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111660 Zm00024ab111660_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab111660 Zm00024ab111660_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab111740 Zm00024ab111740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab111830 Zm00024ab111830_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab112350 Zm00024ab112350_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab112400 Zm00024ab112400_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab112400 Zm00024ab112400_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab112450 Zm00024ab112450_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00024ab112490 Zm00024ab112490_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00024ab112490 Zm00024ab112490_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab112530 Zm00024ab112530_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab112660 Zm00024ab112660_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab112660 Zm00024ab112660_P002 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab112820 Zm00024ab112820_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab112990 Zm00024ab112990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab112990 Zm00024ab112990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab112990 Zm00024ab112990_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab113190 Zm00024ab113190_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab113190 Zm00024ab113190_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab113190 Zm00024ab113190_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab113220 Zm00024ab113220_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab113310 Zm00024ab113310_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab113310 Zm00024ab113310_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab113310 Zm00024ab113310_P001 excluded PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00024ab113560 Zm00024ab113560_P001 conditional PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00024ab113620 Zm00024ab113620_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00024ab113620 Zm00024ab113620_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00024ab113620 Zm00024ab113620_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00024ab113620 Zm00024ab113620_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab113640 Zm00024ab113640_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab113660 Zm00024ab113660_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab113690 Zm00024ab113690_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab113690 Zm00024ab113690_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab113690 Zm00024ab113690_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab113810 Zm00024ab113810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab113810 Zm00024ab113810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab113810 Zm00024ab113810_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab113820 Zm00024ab113820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab113820 Zm00024ab113820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab113820 Zm00024ab113820_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab114100 Zm00024ab114100_P001 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab114130 Zm00024ab114130_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab114130 Zm00024ab114130_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab114280 Zm00024ab114280_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab114370 Zm00024ab114370_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab114370 Zm00024ab114370_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab114370 Zm00024ab114370_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab114380 Zm00024ab114380_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab114380 Zm00024ab114380_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab114380 Zm00024ab114380_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab114390 Zm00024ab114390_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab114390 Zm00024ab114390_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab114390 Zm00024ab114390_P001 manual PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab114470 Zm00024ab114470_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab114470 Zm00024ab114470_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab114540 Zm00024ab114540_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab114540 Zm00024ab114540_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab114540 Zm00024ab114540_P003 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab114710 Zm00024ab114710_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab114710 Zm00024ab114710_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab114710 Zm00024ab114710_P001 NA PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00024ab114720 Zm00024ab114720_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00024ab114720 Zm00024ab114720_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab114740 Zm00024ab114740_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00024ab114820 Zm00024ab114820_P001 expected PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab114860 Zm00024ab114860_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab114910 Zm00024ab114910_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab114910 Zm00024ab114910_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab115140 Zm00024ab115140_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab115140 Zm00024ab115140_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab115140 Zm00024ab115140_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab115140 Zm00024ab115140_P001 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab115360 Zm00024ab115360_P001 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab115370 Zm00024ab115370_P001 expected PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab115470 Zm00024ab115470_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab115470 Zm00024ab115470_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab115470 Zm00024ab115470_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab115470 Zm00024ab115470_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab115510 Zm00024ab115510_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab115680 Zm00024ab115680_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab115680 Zm00024ab115680_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab115840 Zm00024ab115840_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab115840 Zm00024ab115840_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab115840 Zm00024ab115840_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab115840 Zm00024ab115840_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab115910 Zm00024ab115910_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab115910 Zm00024ab115910_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab115910 Zm00024ab115910_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab115930 Zm00024ab115930_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab115990 Zm00024ab115990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab115990 Zm00024ab115990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab115990 Zm00024ab115990_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab115990 Zm00024ab115990_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab116020 Zm00024ab116020_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00024ab116160 Zm00024ab116160_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00024ab116160 Zm00024ab116160_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab116170 Zm00024ab116170_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab116270 Zm00024ab116270_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab116280 Zm00024ab116280_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab116320 Zm00024ab116320_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab116600 Zm00024ab116600_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116600 Zm00024ab116600_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab116600 Zm00024ab116600_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116600 Zm00024ab116600_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab116660 Zm00024ab116660_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab116790 Zm00024ab116790_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab116790 Zm00024ab116790_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab116790 Zm00024ab116790_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab116790 Zm00024ab116790_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab116790 Zm00024ab116790_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab116830 Zm00024ab116830_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab116830 Zm00024ab116830_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab116830 Zm00024ab116830_P003 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab116920 Zm00024ab116920_P003 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab116980 Zm00024ab116980_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab116980 Zm00024ab116980_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab116980 Zm00024ab116980_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab117040 Zm00024ab117040_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117100 Zm00024ab117100_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117100 Zm00024ab117100_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab117100 Zm00024ab117100_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117160 Zm00024ab117160_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab117160 Zm00024ab117160_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab117160 Zm00024ab117160_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00024ab117410 Zm00024ab117410_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00024ab117410 Zm00024ab117410_P001 viridiplantae PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00024ab117440 Zm00024ab117440_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00024ab117440 Zm00024ab117440_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00024ab117450 Zm00024ab117450_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00024ab117450 Zm00024ab117450_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab117530 Zm00024ab117530_P002 NA PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab117550 Zm00024ab117550_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117630 Zm00024ab117630_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117630 Zm00024ab117630_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117630 Zm00024ab117630_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117630 Zm00024ab117630_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117630 Zm00024ab117630_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117710 Zm00024ab117710_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117710 Zm00024ab117710_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117710 Zm00024ab117710_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117710 Zm00024ab117710_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117710 Zm00024ab117710_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab117720 Zm00024ab117720_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab117720 Zm00024ab117720_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117750 Zm00024ab117750_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117750 Zm00024ab117750_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117750 Zm00024ab117750_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117750 Zm00024ab117750_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117750 Zm00024ab117750_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab117760 Zm00024ab117760_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab117760 Zm00024ab117760_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117780 Zm00024ab117780_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117780 Zm00024ab117780_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117780 Zm00024ab117780_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117780 Zm00024ab117780_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117780 Zm00024ab117780_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab117790 Zm00024ab117790_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab117790 Zm00024ab117790_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117800 Zm00024ab117800_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117800 Zm00024ab117800_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117800 Zm00024ab117800_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117800 Zm00024ab117800_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117800 Zm00024ab117800_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117870 Zm00024ab117870_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117870 Zm00024ab117870_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab117870 Zm00024ab117870_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab117870 Zm00024ab117870_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab117870 Zm00024ab117870_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab118000 Zm00024ab118000_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab118000 Zm00024ab118000_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab118000 Zm00024ab118000_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab118000 Zm00024ab118000_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab118000 Zm00024ab118000_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab118010 Zm00024ab118010_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab118010 Zm00024ab118010_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab118010 Zm00024ab118010_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab118010 Zm00024ab118010_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab118010 Zm00024ab118010_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab118170 Zm00024ab118170_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab118170 Zm00024ab118170_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab118170 Zm00024ab118170_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab118170 Zm00024ab118170_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab118400 Zm00024ab118400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab118940 Zm00024ab118940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab118940 Zm00024ab118940_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab118980 Zm00024ab118980_P001 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab119000 Zm00024ab119000_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab119010 Zm00024ab119010_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab119140 Zm00024ab119140_P001 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00024ab119140 Zm00024ab119140_P001 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00024ab119140 Zm00024ab119140_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab119150 Zm00024ab119150_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab119180 Zm00024ab119180_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab119180 Zm00024ab119180_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab119180 Zm00024ab119180_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab119340 Zm00024ab119340_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab119340 Zm00024ab119340_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab119340 Zm00024ab119340_P001 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab119380 Zm00024ab119380_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab119500 Zm00024ab119500_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab119550 Zm00024ab119550_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab119550 Zm00024ab119550_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab119730 Zm00024ab119730_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab119730 Zm00024ab119730_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab119730 Zm00024ab119730_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab119830 Zm00024ab119830_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab119940 Zm00024ab119940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab119940 Zm00024ab119940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab119940 Zm00024ab119940_P001 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00024ab119990 Zm00024ab119990_P001 ubiquitous PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab120080 Zm00024ab120080_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab120080 Zm00024ab120080_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab120080 Zm00024ab120080_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab120080 Zm00024ab120080_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab120080 Zm00024ab120080_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab120080 Zm00024ab120080_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab120080 Zm00024ab120080_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab120080 Zm00024ab120080_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab120080 Zm00024ab120080_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab120080 Zm00024ab120080_P001 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab120100 Zm00024ab120100_P001 conditional PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00024ab120730 Zm00024ab120730_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00024ab120730 Zm00024ab120730_P001 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00024ab120730 Zm00024ab120730_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00024ab120730 Zm00024ab120730_P002 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab120740 Zm00024ab120740_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab120740 Zm00024ab120740_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab120850 Zm00024ab120850_P001 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab120950 Zm00024ab120950_P001 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab121100 Zm00024ab121100_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab121130 Zm00024ab121130_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00024ab121230 Zm00024ab121230_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab121360 Zm00024ab121360_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab121360 Zm00024ab121360_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121430 Zm00024ab121430_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab121700 Zm00024ab121700_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121710 Zm00024ab121710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121710 Zm00024ab121710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121710 Zm00024ab121710_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121720 Zm00024ab121720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121720 Zm00024ab121720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121720 Zm00024ab121720_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121730 Zm00024ab121730_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121730 Zm00024ab121730_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121730 Zm00024ab121730_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00024ab121740 Zm00024ab121740_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab121820 Zm00024ab121820_P002 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4243 EC-1.14.19.41 Zm00024ab122030 Zm00024ab122030_P001 ubiquitous PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab122080 Zm00024ab122080_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab122130 Zm00024ab122130_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab122160 Zm00024ab122160_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab122160 Zm00024ab122160_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab122160 Zm00024ab122160_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00024ab122220 Zm00024ab122220_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00024ab122220 Zm00024ab122220_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00024ab122220 Zm00024ab122220_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00024ab122220 Zm00024ab122220_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00024ab122220 Zm00024ab122220_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00024ab122220 Zm00024ab122220_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab122290 Zm00024ab122290_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab122290 Zm00024ab122290_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab122290 Zm00024ab122290_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab122370 Zm00024ab122370_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab122370 Zm00024ab122370_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab122370 Zm00024ab122370_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab122370 Zm00024ab122370_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab122380 Zm00024ab122380_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00024ab122420 Zm00024ab122420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab122690 Zm00024ab122690_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab122700 Zm00024ab122700_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab122700 Zm00024ab122700_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab122740 Zm00024ab122740_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab122870 Zm00024ab122870_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab123040 Zm00024ab123040_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab123040 Zm00024ab123040_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab123040 Zm00024ab123040_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab123040 Zm00024ab123040_P002 NA PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00024ab123080 Zm00024ab123080_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab123160 Zm00024ab123160_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab123160 Zm00024ab123160_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab123160 Zm00024ab123160_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab123230 Zm00024ab123230_P005 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab123310 Zm00024ab123310_P002 manual PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab123330 Zm00024ab123330_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab123330 Zm00024ab123330_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab123330 Zm00024ab123330_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab123460 Zm00024ab123460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab123460 Zm00024ab123460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab123460 Zm00024ab123460_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab123460 Zm00024ab123460_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab123570 Zm00024ab123570_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab123570 Zm00024ab123570_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab123900 Zm00024ab123900_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab124000 Zm00024ab124000_P001 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124200 Zm00024ab124200_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124200 Zm00024ab124200_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124200 Zm00024ab124200_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124200 Zm00024ab124200_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124200 Zm00024ab124200_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00024ab124200 Zm00024ab124200_P001 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00024ab124230 Zm00024ab124230_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab124300 Zm00024ab124300_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab124320 Zm00024ab124320_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab124320 Zm00024ab124320_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab124340 Zm00024ab124340_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab124340 Zm00024ab124340_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab124350 Zm00024ab124350_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab124350 Zm00024ab124350_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab124510 Zm00024ab124510_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00024ab124570 Zm00024ab124570_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00024ab124570 Zm00024ab124570_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P009 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P010 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P010 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab124580 Zm00024ab124580_P010 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5466 EC-2.4.1.258 Zm00024ab124630 Zm00024ab124630_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab124700 Zm00024ab124700_P001 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab124730 Zm00024ab124730_P002 conditional PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00024ab124790 Zm00024ab124790_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00024ab124790 Zm00024ab124790_P001 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00024ab124840 Zm00024ab124840_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab125000 Zm00024ab125000_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab125300 Zm00024ab125300_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab125310 Zm00024ab125310_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab125330 Zm00024ab125330_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab125470 Zm00024ab125470_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab125470 Zm00024ab125470_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab125470 Zm00024ab125470_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab125470 Zm00024ab125470_P001 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab125530 Zm00024ab125530_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab125540 Zm00024ab125540_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab125560 Zm00024ab125560_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab125720 Zm00024ab125720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab125720 Zm00024ab125720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab125720 Zm00024ab125720_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab125790 Zm00024ab125790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab125790 Zm00024ab125790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab125790 Zm00024ab125790_P001 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126010 Zm00024ab126010_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126020 Zm00024ab126020_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126030 Zm00024ab126030_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126030 Zm00024ab126030_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab126030 Zm00024ab126030_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab126030 Zm00024ab126030_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P005 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P005 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab126100 Zm00024ab126100_P005 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab126150 Zm00024ab126150_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00024ab126190 Zm00024ab126190_P002 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab126250 Zm00024ab126250_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab126310 Zm00024ab126310_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab126630 Zm00024ab126630_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab126630 Zm00024ab126630_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab126630 Zm00024ab126630_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab127170 Zm00024ab127170_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab127170 Zm00024ab127170_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab127170 Zm00024ab127170_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab127170 Zm00024ab127170_P004 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127190 Zm00024ab127190_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127190 Zm00024ab127190_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127190 Zm00024ab127190_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127190 Zm00024ab127190_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127210 Zm00024ab127210_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127210 Zm00024ab127210_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127210 Zm00024ab127210_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127210 Zm00024ab127210_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127220 Zm00024ab127220_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127220 Zm00024ab127220_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127220 Zm00024ab127220_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127220 Zm00024ab127220_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127230 Zm00024ab127230_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127230 Zm00024ab127230_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127230 Zm00024ab127230_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127230 Zm00024ab127230_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab127240 Zm00024ab127240_P003 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab127260 Zm00024ab127260_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab127280 Zm00024ab127280_P001 conditional PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00024ab127320 Zm00024ab127320_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00024ab127320 Zm00024ab127320_P001 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab127380 Zm00024ab127380_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab127560 Zm00024ab127560_P001 conditional PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab127740 Zm00024ab127740_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00024ab127740 Zm00024ab127740_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00024ab127740 Zm00024ab127740_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab127740 Zm00024ab127740_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab128170 Zm00024ab128170_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab128170 Zm00024ab128170_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab128170 Zm00024ab128170_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab128170 Zm00024ab128170_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab128200 Zm00024ab128200_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab128200 Zm00024ab128200_P001 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab128230 Zm00024ab128230_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab128560 Zm00024ab128560_P002 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab128760 Zm00024ab128760_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab128760 Zm00024ab128760_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab128760 Zm00024ab128760_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab128760 Zm00024ab128760_P002 expected PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00024ab128860 Zm00024ab128860_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab128880 Zm00024ab128880_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab128880 Zm00024ab128880_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab128880 Zm00024ab128880_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab129050 Zm00024ab129050_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P004 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P005 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P006 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab129160 Zm00024ab129160_P007 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab129240 Zm00024ab129240_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab129240 Zm00024ab129240_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab129240 Zm00024ab129240_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab129240 Zm00024ab129240_P002 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab129260 Zm00024ab129260_P001 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab129380 Zm00024ab129380_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab129380 Zm00024ab129380_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab129380 Zm00024ab129380_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab129380 Zm00024ab129380_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab129560 Zm00024ab129560_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab129560 Zm00024ab129560_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab129560 Zm00024ab129560_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab129560 Zm00024ab129560_P001 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab129730 Zm00024ab129730_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab129730 Zm00024ab129730_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab129860 Zm00024ab129860_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab129890 Zm00024ab129890_P001 expected RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab129920 Zm00024ab129920_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab129920 Zm00024ab129920_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab130430 Zm00024ab130430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab130430 Zm00024ab130430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab130430 Zm00024ab130430_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00024ab130490 Zm00024ab130490_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00024ab130490 Zm00024ab130490_P002 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab130580 Zm00024ab130580_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab130700 Zm00024ab130700_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab130700 Zm00024ab130700_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab130700 Zm00024ab130700_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab130700 Zm00024ab130700_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab130710 Zm00024ab130710_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab130710 Zm00024ab130710_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab130710 Zm00024ab130710_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab130930 Zm00024ab130930_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab130980 Zm00024ab130980_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab130980 Zm00024ab130980_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab130980 Zm00024ab130980_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab130980 Zm00024ab130980_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00024ab131520 Zm00024ab131520_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131530 Zm00024ab131530_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131530 Zm00024ab131530_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab131540 Zm00024ab131540_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab131560 Zm00024ab131560_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00024ab131660 Zm00024ab131660_P001 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00024ab131660 Zm00024ab131660_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab131720 Zm00024ab131720_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab131720 Zm00024ab131720_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab131720 Zm00024ab131720_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab131740 Zm00024ab131740_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab131740 Zm00024ab131740_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab131740 Zm00024ab131740_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab131740 Zm00024ab131740_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab131890 Zm00024ab131890_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab131910 Zm00024ab131910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131910 Zm00024ab131910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131910 Zm00024ab131910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab131940 Zm00024ab131940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131940 Zm00024ab131940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131940 Zm00024ab131940_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab131950 Zm00024ab131950_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab131990 Zm00024ab131990_P002 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab132000 Zm00024ab132000_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab132040 Zm00024ab132040_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab132040 Zm00024ab132040_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab132040 Zm00024ab132040_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00024ab132110 Zm00024ab132110_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab132130 Zm00024ab132130_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab132300 Zm00024ab132300_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab132640 Zm00024ab132640_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab132640 Zm00024ab132640_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab132640 Zm00024ab132640_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab132640 Zm00024ab132640_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab132710 Zm00024ab132710_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00024ab132720 Zm00024ab132720_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00024ab132780 Zm00024ab132780_P001 viridiplantae SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab132960 Zm00024ab132960_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab132980 Zm00024ab132980_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab132980 Zm00024ab132980_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab132980 Zm00024ab132980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab133000 Zm00024ab133000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab133000 Zm00024ab133000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab133000 Zm00024ab133000_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab133090 Zm00024ab133090_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab133090 Zm00024ab133090_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab133090 Zm00024ab133090_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab133090 Zm00024ab133090_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab133090 Zm00024ab133090_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab133240 Zm00024ab133240_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab133240 Zm00024ab133240_P002 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab133250 Zm00024ab133250_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab133410 Zm00024ab133410_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab133410 Zm00024ab133410_P002 viridiplantae PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab133720 Zm00024ab133720_P002 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab133810 Zm00024ab133810_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab133830 Zm00024ab133830_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab133830 Zm00024ab133830_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab133830 Zm00024ab133830_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab133840 Zm00024ab133840_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab133940 Zm00024ab133940_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab133970 Zm00024ab133970_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab134020 Zm00024ab134020_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab134030 Zm00024ab134030_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab134090 Zm00024ab134090_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab134400 Zm00024ab134400_P001 NA PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab134740 Zm00024ab134740_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab134990 Zm00024ab134990_P001 NA PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00024ab135420 Zm00024ab135420_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab135440 Zm00024ab135440_P001 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab135580 Zm00024ab135580_P001 ubiquitous PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab135640 Zm00024ab135640_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab135960 Zm00024ab135960_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab135960 Zm00024ab135960_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab135980 Zm00024ab135980_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab135980 Zm00024ab135980_P001 conditional GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00024ab136170 Zm00024ab136170_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab136190 Zm00024ab136190_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab136190 Zm00024ab136190_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab136190 Zm00024ab136190_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab136280 Zm00024ab136280_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab136280 Zm00024ab136280_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab136280 Zm00024ab136280_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab136320 Zm00024ab136320_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab136320 Zm00024ab136320_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab136410 Zm00024ab136410_P002 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab136540 Zm00024ab136540_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab136540 Zm00024ab136540_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00024ab136540 Zm00024ab136540_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab136550 Zm00024ab136550_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab136550 Zm00024ab136550_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab136550 Zm00024ab136550_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab136550 Zm00024ab136550_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab136550 Zm00024ab136550_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab136600 Zm00024ab136600_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab136830 Zm00024ab136830_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab136880 Zm00024ab136880_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab136910 Zm00024ab136910_P001 conditional PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab137080 Zm00024ab137080_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab137440 Zm00024ab137440_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab137710 Zm00024ab137710_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab137710 Zm00024ab137710_P001 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P003 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P004 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P005 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P005 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P006 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00024ab137770 Zm00024ab137770_P006 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab137830 Zm00024ab137830_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab137920 Zm00024ab137920_P001 expected PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab138070 Zm00024ab138070_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab138070 Zm00024ab138070_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab138070 Zm00024ab138070_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab138170 Zm00024ab138170_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab138330 Zm00024ab138330_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab138560 Zm00024ab138560_P001 expected GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab138860 Zm00024ab138860_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab138860 Zm00024ab138860_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P006 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab139120 Zm00024ab139120_P007 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab139300 Zm00024ab139300_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab139330 Zm00024ab139330_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab139330 Zm00024ab139330_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab139330 Zm00024ab139330_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab139330 Zm00024ab139330_P001 NA GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab139610 Zm00024ab139610_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab139610 Zm00024ab139610_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab139610 Zm00024ab139610_P001 manual PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab139630 Zm00024ab139630_P003 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00024ab139680 Zm00024ab139680_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00024ab139680 Zm00024ab139680_P001 excluded PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab139800 Zm00024ab139800_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab139800 Zm00024ab139800_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab139870 Zm00024ab139870_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab139870 Zm00024ab139870_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab139870 Zm00024ab139870_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab139870 Zm00024ab139870_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab139870 Zm00024ab139870_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab139870 Zm00024ab139870_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab139870 Zm00024ab139870_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab139870 Zm00024ab139870_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab139870 Zm00024ab139870_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab139870 Zm00024ab139870_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab139870 Zm00024ab139870_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab139870 Zm00024ab139870_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab139950 Zm00024ab139950_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab139950 Zm00024ab139950_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab139950 Zm00024ab139950_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab139950 Zm00024ab139950_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab139950 Zm00024ab139950_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab140010 Zm00024ab140010_P001 NA PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab140140 Zm00024ab140140_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab140210 Zm00024ab140210_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00024ab140220 Zm00024ab140220_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00024ab140220 Zm00024ab140220_P001 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab140270 Zm00024ab140270_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab140270 Zm00024ab140270_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab140270 Zm00024ab140270_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab140270 Zm00024ab140270_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab140270 Zm00024ab140270_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab140300 Zm00024ab140300_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab140300 Zm00024ab140300_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab140300 Zm00024ab140300_P003 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab140330 Zm00024ab140330_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab140400 Zm00024ab140400_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab140420 Zm00024ab140420_P004 NA PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab140530 Zm00024ab140530_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab140530 Zm00024ab140530_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab140530 Zm00024ab140530_P003 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00024ab140650 Zm00024ab140650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00024ab140650 Zm00024ab140650_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab140770 Zm00024ab140770_P001 viridiplantae PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00024ab140780 Zm00024ab140780_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab140860 Zm00024ab140860_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab140870 Zm00024ab140870_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab140870 Zm00024ab140870_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab140890 Zm00024ab140890_P006 conditional PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P003 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P004 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00024ab140930 Zm00024ab140930_P004 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab140940 Zm00024ab140940_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab140940 Zm00024ab140940_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab140950 Zm00024ab140950_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab141240 Zm00024ab141240_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab141260 Zm00024ab141260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab141260 Zm00024ab141260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab141260 Zm00024ab141260_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab141280 Zm00024ab141280_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab141290 Zm00024ab141290_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab141290 Zm00024ab141290_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab141290 Zm00024ab141290_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab141350 Zm00024ab141350_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab141350 Zm00024ab141350_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab141400 Zm00024ab141400_P004 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab142400 Zm00024ab142400_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab142400 Zm00024ab142400_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab142490 Zm00024ab142490_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab142530 Zm00024ab142530_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab142530 Zm00024ab142530_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab142530 Zm00024ab142530_P001 conditional PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00024ab142560 Zm00024ab142560_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab142640 Zm00024ab142640_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab142640 Zm00024ab142640_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab142640 Zm00024ab142640_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab142710 Zm00024ab142710_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab142760 Zm00024ab142760_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab142760 Zm00024ab142760_P001 expected PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00024ab142800 Zm00024ab142800_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00024ab142800 Zm00024ab142800_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab142960 Zm00024ab142960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab142960 Zm00024ab142960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab142960 Zm00024ab142960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab142970 Zm00024ab142970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab142970 Zm00024ab142970_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab142970 Zm00024ab142970_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab143130 Zm00024ab143130_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab143180 Zm00024ab143180_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab143180 Zm00024ab143180_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab143180 Zm00024ab143180_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab143180 Zm00024ab143180_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab143250 Zm00024ab143250_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab143250 Zm00024ab143250_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab143250 Zm00024ab143250_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab143250 Zm00024ab143250_P004 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab143280 Zm00024ab143280_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab143330 Zm00024ab143330_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab143490 Zm00024ab143490_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab143530 Zm00024ab143530_P001 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab143610 Zm00024ab143610_P001 expected PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00024ab143620 Zm00024ab143620_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00024ab143620 Zm00024ab143620_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00024ab143620 Zm00024ab143620_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00024ab143620 Zm00024ab143620_P002 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00024ab143630 Zm00024ab143630_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00024ab143630 Zm00024ab143630_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143710 Zm00024ab143710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143710 Zm00024ab143710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143710 Zm00024ab143710_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143730 Zm00024ab143730_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143730 Zm00024ab143730_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143730 Zm00024ab143730_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143740 Zm00024ab143740_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143740 Zm00024ab143740_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143740 Zm00024ab143740_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143750 Zm00024ab143750_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143750 Zm00024ab143750_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143750 Zm00024ab143750_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143760 Zm00024ab143760_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143760 Zm00024ab143760_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143760 Zm00024ab143760_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143780 Zm00024ab143780_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143780 Zm00024ab143780_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143780 Zm00024ab143780_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143790 Zm00024ab143790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143790 Zm00024ab143790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143790 Zm00024ab143790_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143800 Zm00024ab143800_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143800 Zm00024ab143800_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143800 Zm00024ab143800_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab143810 Zm00024ab143810_P002 conditional PROSYN-PWY L-proline biosynthesis I PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00024ab143900 Zm00024ab143900_P001 conditional PWY-3341 L-proline biosynthesis III PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00024ab143900 Zm00024ab143900_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00024ab143900 Zm00024ab143900_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab143930 Zm00024ab143930_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab143940 Zm00024ab143940_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab143970 Zm00024ab143970_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab143970 Zm00024ab143970_P002 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab144290 Zm00024ab144290_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00024ab144330 Zm00024ab144330_P001 conditional PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab144370 Zm00024ab144370_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab144370 Zm00024ab144370_P002 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab144530 Zm00024ab144530_P004 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab144540 Zm00024ab144540_P001 viridiplantae PWY-6585 2-methylketone biosynthesis RXN-11669 EC-4.1.1.56 Zm00024ab144740 Zm00024ab144740_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab144850 Zm00024ab144850_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab144850 Zm00024ab144850_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab144850 Zm00024ab144850_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab145020 Zm00024ab145020_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab145020 Zm00024ab145020_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab145020 Zm00024ab145020_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab145200 Zm00024ab145200_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab145200 Zm00024ab145200_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab145200 Zm00024ab145200_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab145200 Zm00024ab145200_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab145280 Zm00024ab145280_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab145310 Zm00024ab145310_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab145340 Zm00024ab145340_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab145340 Zm00024ab145340_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab145350 Zm00024ab145350_P001 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab145360 Zm00024ab145360_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab145360 Zm00024ab145360_P001 viridiplantae PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00024ab145440 Zm00024ab145440_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab145600 Zm00024ab145600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab145600 Zm00024ab145600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab145600 Zm00024ab145600_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab145780 Zm00024ab145780_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00024ab145790 Zm00024ab145790_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab145900 Zm00024ab145900_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab145960 Zm00024ab145960_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab145960 Zm00024ab145960_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab146060 Zm00024ab146060_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab146060 Zm00024ab146060_P001 expected GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab146100 Zm00024ab146100_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab146100 Zm00024ab146100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab146200 Zm00024ab146200_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab146330 Zm00024ab146330_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab146400 Zm00024ab146400_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab146810 Zm00024ab146810_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab146830 Zm00024ab146830_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab146970 Zm00024ab146970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab146970 Zm00024ab146970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab146970 Zm00024ab146970_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P002 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P003 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P004 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P004 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00024ab147010 Zm00024ab147010_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab147080 Zm00024ab147080_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab147080 Zm00024ab147080_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab147230 Zm00024ab147230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab147230 Zm00024ab147230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab147230 Zm00024ab147230_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab147260 Zm00024ab147260_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab147420 Zm00024ab147420_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab147420 Zm00024ab147420_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab147540 Zm00024ab147540_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab147560 Zm00024ab147560_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147560 Zm00024ab147560_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147560 Zm00024ab147560_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab147590 Zm00024ab147590_P003 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab147630 Zm00024ab147630_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab147630 Zm00024ab147630_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab147970 Zm00024ab147970_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab147980 Zm00024ab147980_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab148030 Zm00024ab148030_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab148030 Zm00024ab148030_P001 expected PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab148110 Zm00024ab148110_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab148110 Zm00024ab148110_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab148130 Zm00024ab148130_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab148130 Zm00024ab148130_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00024ab148130 Zm00024ab148130_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00024ab148130 Zm00024ab148130_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00024ab148130 Zm00024ab148130_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00024ab148130 Zm00024ab148130_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00024ab148130 Zm00024ab148130_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab148180 Zm00024ab148180_P001 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab148230 Zm00024ab148230_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab148380 Zm00024ab148380_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab148560 Zm00024ab148560_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab148560 Zm00024ab148560_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab148560 Zm00024ab148560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab148560 Zm00024ab148560_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab148560 Zm00024ab148560_P001 NA PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab148610 Zm00024ab148610_P001 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab148700 Zm00024ab148700_P003 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab148710 Zm00024ab148710_P001 expected LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab148750 Zm00024ab148750_P001 viridiplantae PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00024ab148780 Zm00024ab148780_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00024ab148780 Zm00024ab148780_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00024ab148780 Zm00024ab148780_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00024ab148780 Zm00024ab148780_P002 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab148840 Zm00024ab148840_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab148840 Zm00024ab148840_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab148920 Zm00024ab148920_P004 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab148960 Zm00024ab148960_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab148960 Zm00024ab148960_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab148960 Zm00024ab148960_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab148960 Zm00024ab148960_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab148960 Zm00024ab148960_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab148960 Zm00024ab148960_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab149210 Zm00024ab149210_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab149260 Zm00024ab149260_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab149350 Zm00024ab149350_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab149360 Zm00024ab149360_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab149370 Zm00024ab149370_P001 conditional PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00024ab149380 Zm00024ab149380_P001 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00024ab149380 Zm00024ab149380_P002 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00024ab149380 Zm00024ab149380_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab149590 Zm00024ab149590_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab149610 Zm00024ab149610_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab149620 Zm00024ab149620_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab149630 Zm00024ab149630_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab149710 Zm00024ab149710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab149710 Zm00024ab149710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab149710 Zm00024ab149710_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00024ab149850 Zm00024ab149850_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00024ab149850 Zm00024ab149850_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00024ab149850 Zm00024ab149850_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00024ab149850 Zm00024ab149850_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00024ab149850 Zm00024ab149850_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00024ab149850 Zm00024ab149850_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab149970 Zm00024ab149970_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab149970 Zm00024ab149970_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab149970 Zm00024ab149970_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab149970 Zm00024ab149970_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab150000 Zm00024ab150000_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle SEDOHEPTULOSE-BISPHOSPHATASE-RXN EC-3.1.3.37 Zm00024ab150100 Zm00024ab150100_P001 viridiplantae PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00024ab150140 Zm00024ab150140_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab150200 Zm00024ab150200_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab150200 Zm00024ab150200_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab150200 Zm00024ab150200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150220 Zm00024ab150220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150220 Zm00024ab150220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150220 Zm00024ab150220_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150220 Zm00024ab150220_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150240 Zm00024ab150240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150240 Zm00024ab150240_P001 conditional PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P005 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P006 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P006 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P007 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab150400 Zm00024ab150400_P007 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab150450 Zm00024ab150450_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab150450 Zm00024ab150450_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab150450 Zm00024ab150450_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab150450 Zm00024ab150450_P001 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab150490 Zm00024ab150490_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150560 Zm00024ab150560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150560 Zm00024ab150560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150560 Zm00024ab150560_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150560 Zm00024ab150560_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150600 Zm00024ab150600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150600 Zm00024ab150600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150610 Zm00024ab150610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab150610 Zm00024ab150610_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab150820 Zm00024ab150820_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab150920 Zm00024ab150920_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab151190 Zm00024ab151190_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab151190 Zm00024ab151190_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab151380 Zm00024ab151380_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab151450 Zm00024ab151450_P001 ubiquitous PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab151460 Zm00024ab151460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab151530 Zm00024ab151530_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00024ab151560 Zm00024ab151560_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00024ab151560 Zm00024ab151560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab151970 Zm00024ab151970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab152120 Zm00024ab152120_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab152150 Zm00024ab152150_P002 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab152350 Zm00024ab152350_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab152350 Zm00024ab152350_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab152350 Zm00024ab152350_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab152350 Zm00024ab152350_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab152380 Zm00024ab152380_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab152410 Zm00024ab152410_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab152570 Zm00024ab152570_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab152580 Zm00024ab152580_P001 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P002 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P003 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P003 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P004 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab152800 Zm00024ab152800_P004 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab152900 Zm00024ab152900_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00024ab153030 Zm00024ab153030_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00024ab153030 Zm00024ab153030_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab153110 Zm00024ab153110_P001 conditional PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P001 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P002 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P002 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P003 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P003 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P004 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00024ab153310 Zm00024ab153310_P004 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00024ab153480 Zm00024ab153480_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00024ab153480 Zm00024ab153480_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00024ab153480 Zm00024ab153480_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4392 EC-2.7.8.5 Zm00024ab153480 Zm00024ab153480_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab153560 Zm00024ab153560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab153560 Zm00024ab153560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab153560 Zm00024ab153560_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab153800 Zm00024ab153800_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab153830 Zm00024ab153830_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab153850 Zm00024ab153850_P002 NA PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00024ab154050 Zm00024ab154050_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00024ab154050 Zm00024ab154050_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00024ab154060 Zm00024ab154060_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00024ab154060 Zm00024ab154060_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab154110 Zm00024ab154110_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab154110 Zm00024ab154110_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab154200 Zm00024ab154200_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab154200 Zm00024ab154200_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab154260 Zm00024ab154260_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab154260 Zm00024ab154260_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab154260 Zm00024ab154260_P003 ubiquitous PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00024ab154530 Zm00024ab154530_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00024ab154540 Zm00024ab154540_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab154610 Zm00024ab154610_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab154710 Zm00024ab154710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab154710 Zm00024ab154710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab154710 Zm00024ab154710_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab154790 Zm00024ab154790_P002 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab154960 Zm00024ab154960_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P005 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P005 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P005 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P005 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab154990 Zm00024ab154990_P005 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab155010 Zm00024ab155010_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab155170 Zm00024ab155170_P003 NA PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab155280 Zm00024ab155280_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab155310 Zm00024ab155310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab155410 Zm00024ab155410_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab155440 Zm00024ab155440_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab155440 Zm00024ab155440_P002 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab155560 Zm00024ab155560_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab155560 Zm00024ab155560_P002 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13643 EC-1.13.11.69 Zm00024ab155580 Zm00024ab155580_P001 conditional PWY-6806 carotenoid cleavage RXN-12393 EC-1.13.11.70 Zm00024ab155580 Zm00024ab155580_P001 expected PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00024ab155610 Zm00024ab155610_P001 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00024ab155610 Zm00024ab155610_P002 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00024ab155610 Zm00024ab155610_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab155760 Zm00024ab155760_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab155760 Zm00024ab155760_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab155760 Zm00024ab155760_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab155840 Zm00024ab155840_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab155880 Zm00024ab155880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab155880 Zm00024ab155880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab155880 Zm00024ab155880_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab155880 Zm00024ab155880_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab155890 Zm00024ab155890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab155890 Zm00024ab155890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab155890 Zm00024ab155890_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab155890 Zm00024ab155890_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab155950 Zm00024ab155950_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab155950 Zm00024ab155950_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab156040 Zm00024ab156040_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab156040 Zm00024ab156040_P001 viridiplantae NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00024ab156070 Zm00024ab156070_P001 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab156140 Zm00024ab156140_P001 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab156240 Zm00024ab156240_P002 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab156480 Zm00024ab156480_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab156530 Zm00024ab156530_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab156930 Zm00024ab156930_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab157020 Zm00024ab157020_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab157020 Zm00024ab157020_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab157020 Zm00024ab157020_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab157080 Zm00024ab157080_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab157080 Zm00024ab157080_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab157080 Zm00024ab157080_P001 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab157150 Zm00024ab157150_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab157180 Zm00024ab157180_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab157180 Zm00024ab157180_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab157180 Zm00024ab157180_P001 manual PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab157200 Zm00024ab157200_P002 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab157400 Zm00024ab157400_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab157400 Zm00024ab157400_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab157440 Zm00024ab157440_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab157440 Zm00024ab157440_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab157530 Zm00024ab157530_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00024ab157570 Zm00024ab157570_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab157570 Zm00024ab157570_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab157570 Zm00024ab157570_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab157620 Zm00024ab157620_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab157760 Zm00024ab157760_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab157780 Zm00024ab157780_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab157780 Zm00024ab157780_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab157780 Zm00024ab157780_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab157780 Zm00024ab157780_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00024ab157780 Zm00024ab157780_P001 NA PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00024ab157810 Zm00024ab157810_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab157810 Zm00024ab157810_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab157810 Zm00024ab157810_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab157830 Zm00024ab157830_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab157830 Zm00024ab157830_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab157830 Zm00024ab157830_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab157850 Zm00024ab157850_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab157880 Zm00024ab157880_P005 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab158030 Zm00024ab158030_P001 expected PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab158260 Zm00024ab158260_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab158260 Zm00024ab158260_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab158260 Zm00024ab158260_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab158260 Zm00024ab158260_P001 viridiplantae PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P002 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P003 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00024ab158350 Zm00024ab158350_P003 expected PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab158700 Zm00024ab158700_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab158700 Zm00024ab158700_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab158700 Zm00024ab158700_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab158700 Zm00024ab158700_P001 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab158770 Zm00024ab158770_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab158840 Zm00024ab158840_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab158910 Zm00024ab158910_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab159070 Zm00024ab159070_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00024ab159070 Zm00024ab159070_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab159080 Zm00024ab159080_P001 conditional PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00024ab159260 Zm00024ab159260_P001 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab159330 Zm00024ab159330_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab159330 Zm00024ab159330_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab159350 Zm00024ab159350_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab159350 Zm00024ab159350_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab159350 Zm00024ab159350_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab159380 Zm00024ab159380_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab159400 Zm00024ab159400_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab159400 Zm00024ab159400_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab159400 Zm00024ab159400_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab159400 Zm00024ab159400_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab159400 Zm00024ab159400_P002 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab159400 Zm00024ab159400_P002 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab159510 Zm00024ab159510_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab159580 Zm00024ab159580_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab159580 Zm00024ab159580_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab159580 Zm00024ab159580_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab159650 Zm00024ab159650_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab159650 Zm00024ab159650_P002 expected PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab159690 Zm00024ab159690_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab159890 Zm00024ab159890_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab160040 Zm00024ab160040_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab160070 Zm00024ab160070_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab160070 Zm00024ab160070_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab160070 Zm00024ab160070_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab160160 Zm00024ab160160_P001 viridiplantae PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00024ab160260 Zm00024ab160260_P001 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00024ab160260 Zm00024ab160260_P002 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00024ab160260 Zm00024ab160260_P003 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00024ab160260 Zm00024ab160260_P004 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00024ab160360 Zm00024ab160360_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00024ab160360 Zm00024ab160360_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab160590 Zm00024ab160590_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab160590 Zm00024ab160590_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab160590 Zm00024ab160590_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab160590 Zm00024ab160590_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab160610 Zm00024ab160610_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab160660 Zm00024ab160660_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab160660 Zm00024ab160660_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab160680 Zm00024ab160680_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab160800 Zm00024ab160800_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab160830 Zm00024ab160830_P001 NA PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab160850 Zm00024ab160850_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab160850 Zm00024ab160850_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab160880 Zm00024ab160880_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab160980 Zm00024ab160980_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab160980 Zm00024ab160980_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab160980 Zm00024ab160980_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab160980 Zm00024ab160980_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab161020 Zm00024ab161020_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab161020 Zm00024ab161020_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161030 Zm00024ab161030_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab161050 Zm00024ab161050_P002 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P005 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161060 Zm00024ab161060_P006 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161090 Zm00024ab161090_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161090 Zm00024ab161090_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161110 Zm00024ab161110_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161120 Zm00024ab161120_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab161120 Zm00024ab161120_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab161130 Zm00024ab161130_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab161130 Zm00024ab161130_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab161140 Zm00024ab161140_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab161140 Zm00024ab161140_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab161140 Zm00024ab161140_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab161160 Zm00024ab161160_P001 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab161230 Zm00024ab161230_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab161230 Zm00024ab161230_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab161300 Zm00024ab161300_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab161300 Zm00024ab161300_P001 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab161460 Zm00024ab161460_P001 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab161500 Zm00024ab161500_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab161500 Zm00024ab161500_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab161510 Zm00024ab161510_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab161540 Zm00024ab161540_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab161550 Zm00024ab161550_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab161550 Zm00024ab161550_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab161550 Zm00024ab161550_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab161550 Zm00024ab161550_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab161580 Zm00024ab161580_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab161580 Zm00024ab161580_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab161580 Zm00024ab161580_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab161580 Zm00024ab161580_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab161630 Zm00024ab161630_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab161630 Zm00024ab161630_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab161640 Zm00024ab161640_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab161660 Zm00024ab161660_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab161660 Zm00024ab161660_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab161660 Zm00024ab161660_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00024ab161660 Zm00024ab161660_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00024ab161660 Zm00024ab161660_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00024ab161660 Zm00024ab161660_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab161710 Zm00024ab161710_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab161840 Zm00024ab161840_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab161840 Zm00024ab161840_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab161840 Zm00024ab161840_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab161840 Zm00024ab161840_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab161840 Zm00024ab161840_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab161920 Zm00024ab161920_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab161920 Zm00024ab161920_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab161920 Zm00024ab161920_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab161920 Zm00024ab161920_P001 NA PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab162220 Zm00024ab162220_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab162220 Zm00024ab162220_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab162340 Zm00024ab162340_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab162480 Zm00024ab162480_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab162530 Zm00024ab162530_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab162600 Zm00024ab162600_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab162670 Zm00024ab162670_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab162670 Zm00024ab162670_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab162890 Zm00024ab162890_P002 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab163440 Zm00024ab163440_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab163620 Zm00024ab163620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab163660 Zm00024ab163660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab163660 Zm00024ab163660_P002 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163740 Zm00024ab163740_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163740 Zm00024ab163740_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163740 Zm00024ab163740_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163740 Zm00024ab163740_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163740 Zm00024ab163740_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163800 Zm00024ab163800_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163800 Zm00024ab163800_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163800 Zm00024ab163800_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163800 Zm00024ab163800_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab163800 Zm00024ab163800_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab163830 Zm00024ab163830_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab163920 Zm00024ab163920_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab163920 Zm00024ab163920_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00024ab164150 Zm00024ab164150_P003 conditional PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab164680 Zm00024ab164680_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab164780 Zm00024ab164780_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab164960 Zm00024ab164960_P002 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00024ab165090 Zm00024ab165090_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab165190 Zm00024ab165190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab165190 Zm00024ab165190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab165190 Zm00024ab165190_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab165400 Zm00024ab165400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab165500 Zm00024ab165500_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165590 Zm00024ab165590_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165590 Zm00024ab165590_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165590 Zm00024ab165590_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165590 Zm00024ab165590_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165590 Zm00024ab165590_P005 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab165680 Zm00024ab165680_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab165680 Zm00024ab165680_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab165680 Zm00024ab165680_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab165690 Zm00024ab165690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab165690 Zm00024ab165690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab165690 Zm00024ab165690_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165710 Zm00024ab165710_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165720 Zm00024ab165720_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165730 Zm00024ab165730_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab165740 Zm00024ab165740_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab165910 Zm00024ab165910_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab165910 Zm00024ab165910_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab165910 Zm00024ab165910_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab165910 Zm00024ab165910_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab165970 Zm00024ab165970_P001 viridiplantae PWY-5139 pelargonidin conjugates biosynthesis RXN-7832 EC-2.4.1.116 Zm00024ab166110 Zm00024ab166110_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00024ab166240 Zm00024ab166240_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00024ab166240 Zm00024ab166240_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab166450 Zm00024ab166450_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab166630 Zm00024ab166630_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab166630 Zm00024ab166630_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab166640 Zm00024ab166640_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab166640 Zm00024ab166640_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab166640 Zm00024ab166640_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab166860 Zm00024ab166860_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab166860 Zm00024ab166860_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab166860 Zm00024ab166860_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab166970 Zm00024ab166970_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab167000 Zm00024ab167000_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab167000 Zm00024ab167000_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab167080 Zm00024ab167080_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab167550 Zm00024ab167550_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab167550 Zm00024ab167550_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab167690 Zm00024ab167690_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab167830 Zm00024ab167830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab167830 Zm00024ab167830_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab167910 Zm00024ab167910_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab167910 Zm00024ab167910_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab167920 Zm00024ab167920_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab168220 Zm00024ab168220_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab168230 Zm00024ab168230_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab168230 Zm00024ab168230_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab168270 Zm00024ab168270_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab168380 Zm00024ab168380_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab168400 Zm00024ab168400_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab168400 Zm00024ab168400_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab168440 Zm00024ab168440_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab168460 Zm00024ab168460_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab168460 Zm00024ab168460_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab168590 Zm00024ab168590_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab168590 Zm00024ab168590_P002 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00024ab168800 Zm00024ab168800_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00024ab168800 Zm00024ab168800_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab168810 Zm00024ab168810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab168810 Zm00024ab168810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab168810 Zm00024ab168810_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab168810 Zm00024ab168810_P002 conditional PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab168860 Zm00024ab168860_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab168860 Zm00024ab168860_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab168860 Zm00024ab168860_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab168930 Zm00024ab168930_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab168930 Zm00024ab168930_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab168930 Zm00024ab168930_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab168930 Zm00024ab168930_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab168930 Zm00024ab168930_P001 NA GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab169070 Zm00024ab169070_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab169070 Zm00024ab169070_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab169180 Zm00024ab169180_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab169220 Zm00024ab169220_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab169240 Zm00024ab169240_P006 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab169610 Zm00024ab169610_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab169680 Zm00024ab169680_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab169840 Zm00024ab169840_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab169840 Zm00024ab169840_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab169840 Zm00024ab169840_P001 NA PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169850 Zm00024ab169850_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169850 Zm00024ab169850_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169850 Zm00024ab169850_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169920 Zm00024ab169920_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169920 Zm00024ab169920_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169920 Zm00024ab169920_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169930 Zm00024ab169930_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169930 Zm00024ab169930_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00024ab169930 Zm00024ab169930_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00024ab169950 Zm00024ab169950_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab170080 Zm00024ab170080_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab170080 Zm00024ab170080_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab170080 Zm00024ab170080_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab170080 Zm00024ab170080_P001 NA PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab170250 Zm00024ab170250_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00024ab170250 Zm00024ab170250_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00024ab170250 Zm00024ab170250_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab170250 Zm00024ab170250_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab170360 Zm00024ab170360_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab170360 Zm00024ab170360_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab170360 Zm00024ab170360_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab170400 Zm00024ab170400_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab170400 Zm00024ab170400_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab170400 Zm00024ab170400_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab170480 Zm00024ab170480_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab170590 Zm00024ab170590_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab170590 Zm00024ab170590_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab170590 Zm00024ab170590_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00024ab170610 Zm00024ab170610_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab170770 Zm00024ab170770_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab170810 Zm00024ab170810_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab170810 Zm00024ab170810_P001 conditional PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00024ab170850 Zm00024ab170850_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab171080 Zm00024ab171080_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab171080 Zm00024ab171080_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab171080 Zm00024ab171080_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab171180 Zm00024ab171180_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab171180 Zm00024ab171180_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab171180 Zm00024ab171180_P001 NA PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab171250 Zm00024ab171250_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00024ab171310 Zm00024ab171310_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00024ab171310 Zm00024ab171310_P002 ubiquitous PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab171370 Zm00024ab171370_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab171420 Zm00024ab171420_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab171470 Zm00024ab171470_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab171490 Zm00024ab171490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab171490 Zm00024ab171490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab171490 Zm00024ab171490_P001 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab171510 Zm00024ab171510_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab171530 Zm00024ab171530_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab171530 Zm00024ab171530_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab171530 Zm00024ab171530_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab171530 Zm00024ab171530_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab171540 Zm00024ab171540_P004 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab171630 Zm00024ab171630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab171630 Zm00024ab171630_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00024ab171660 Zm00024ab171660_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00024ab171660 Zm00024ab171660_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab171720 Zm00024ab171720_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab171720 Zm00024ab171720_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab171720 Zm00024ab171720_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab171920 Zm00024ab171920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab171920 Zm00024ab171920_P002 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab172080 Zm00024ab172080_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab172190 Zm00024ab172190_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab172220 Zm00024ab172220_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab172220 Zm00024ab172220_P001 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab172250 Zm00024ab172250_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab172250 Zm00024ab172250_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab172250 Zm00024ab172250_P001 expected PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab172520 Zm00024ab172520_P001 excluded PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00024ab172530 Zm00024ab172530_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00024ab172530 Zm00024ab172530_P002 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00024ab172540 Zm00024ab172540_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab172580 Zm00024ab172580_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab172590 Zm00024ab172590_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab172590 Zm00024ab172590_P002 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00024ab172620 Zm00024ab172620_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab172660 Zm00024ab172660_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab172680 Zm00024ab172680_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab172700 Zm00024ab172700_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab172780 Zm00024ab172780_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab172910 Zm00024ab172910_P001 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab172980 Zm00024ab172980_P002 excluded PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00024ab173010 Zm00024ab173010_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00024ab173010 Zm00024ab173010_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00024ab173010 Zm00024ab173010_P002 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00024ab173010 Zm00024ab173010_P002 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab173190 Zm00024ab173190_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab173210 Zm00024ab173210_P001 viridiplantae PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00024ab173230 Zm00024ab173230_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab173270 Zm00024ab173270_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab173270 Zm00024ab173270_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00024ab173270 Zm00024ab173270_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00024ab173320 Zm00024ab173320_P001 ubiquitous PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab173330 Zm00024ab173330_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab173330 Zm00024ab173330_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab173430 Zm00024ab173430_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab173430 Zm00024ab173430_P001 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab173540 Zm00024ab173540_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab173540 Zm00024ab173540_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab173540 Zm00024ab173540_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab173540 Zm00024ab173540_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab173540 Zm00024ab173540_P001 excluded PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab173660 Zm00024ab173660_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab173730 Zm00024ab173730_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab173780 Zm00024ab173780_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00024ab173910 Zm00024ab173910_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00024ab173910 Zm00024ab173910_P002 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P002 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P003 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab174160 Zm00024ab174160_P003 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P003 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab174160 Zm00024ab174160_P003 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab174330 Zm00024ab174330_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab174680 Zm00024ab174680_P001 NA PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab174800 Zm00024ab174800_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab174840 Zm00024ab174840_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P003 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab175110 Zm00024ab175110_P003 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab175160 Zm00024ab175160_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab175160 Zm00024ab175160_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab175160 Zm00024ab175160_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00024ab175320 Zm00024ab175320_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00024ab175330 Zm00024ab175330_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1104 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 expected PWY-7186 superpathway of scopolin and esculin biosynthesis RXN-1104 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1143 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 conditional PWY-5868 simple coumarins biosynthesis RXN-1104 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 NA PWY-2181 free phenylpropanoid acid biosynthesis RXN-1104 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 conditional PWY-5168 ferulate and sinapate biosynthesis RXN-1143 EC-2.1.1.68 Zm00024ab175350 Zm00024ab175350_P001 conditional PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab175590 Zm00024ab175590_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab175590 Zm00024ab175590_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab175720 Zm00024ab175720_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab175720 Zm00024ab175720_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab175720 Zm00024ab175720_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab175720 Zm00024ab175720_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab175940 Zm00024ab175940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab175940 Zm00024ab175940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab175950 Zm00024ab175950_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab175950 Zm00024ab175950_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00024ab176040 Zm00024ab176040_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab176080 Zm00024ab176080_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab176160 Zm00024ab176160_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab176160 Zm00024ab176160_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab176160 Zm00024ab176160_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab176160 Zm00024ab176160_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab176210 Zm00024ab176210_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab176210 Zm00024ab176210_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab176210 Zm00024ab176210_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab176210 Zm00024ab176210_P001 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P004 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab176420 Zm00024ab176420_P005 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab176470 Zm00024ab176470_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab176540 Zm00024ab176540_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab176540 Zm00024ab176540_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab176540 Zm00024ab176540_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab177000 Zm00024ab177000_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab177000 Zm00024ab177000_P001 conditional PWY-5098 chlorophyll a degradation I 3.1.1.82-RXN EC-3.1.1.82 Zm00024ab177020 Zm00024ab177020_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab177200 Zm00024ab177200_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab177200 Zm00024ab177200_P002 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab177360 Zm00024ab177360_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab177360 Zm00024ab177360_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab177740 Zm00024ab177740_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab177740 Zm00024ab177740_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab177850 Zm00024ab177850_P001 viridiplantae PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00024ab177910 Zm00024ab177910_P001 conditional PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab177990 Zm00024ab177990_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab177990 Zm00024ab177990_P002 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00024ab178220 Zm00024ab178220_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab178470 Zm00024ab178470_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab178470 Zm00024ab178470_P002 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab178490 Zm00024ab178490_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab178500 Zm00024ab178500_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab178630 Zm00024ab178630_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab178640 Zm00024ab178640_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab178800 Zm00024ab178800_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab178800 Zm00024ab178800_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab178800 Zm00024ab178800_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab178800 Zm00024ab178800_P001 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab178820 Zm00024ab178820_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00024ab178820 Zm00024ab178820_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab178940 Zm00024ab178940_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab178940 Zm00024ab178940_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00024ab178940 Zm00024ab178940_P001 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab178960 Zm00024ab178960_P004 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab179020 Zm00024ab179020_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00024ab179040 Zm00024ab179040_P001 viridiplantae PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00024ab179060 Zm00024ab179060_P001 ubiquitous PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00024ab179150 Zm00024ab179150_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00024ab179150 Zm00024ab179150_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00024ab179150 Zm00024ab179150_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00024ab179150 Zm00024ab179150_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab179320 Zm00024ab179320_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab179320 Zm00024ab179320_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab179320 Zm00024ab179320_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00024ab179360 Zm00024ab179360_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00024ab179360 Zm00024ab179360_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab179420 Zm00024ab179420_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab179420 Zm00024ab179420_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab179440 Zm00024ab179440_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab179450 Zm00024ab179450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab179450 Zm00024ab179450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab179450 Zm00024ab179450_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab179590 Zm00024ab179590_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab179590 Zm00024ab179590_P002 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab179590 Zm00024ab179590_P003 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00024ab179590 Zm00024ab179590_P004 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab179620 Zm00024ab179620_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab179820 Zm00024ab179820_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab179960 Zm00024ab179960_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab179970 Zm00024ab179970_P001 expected PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab180150 Zm00024ab180150_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab180260 Zm00024ab180260_P003 conditional HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab180350 Zm00024ab180350_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab180350 Zm00024ab180350_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab180350 Zm00024ab180350_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab180490 Zm00024ab180490_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab180510 Zm00024ab180510_P001 expected PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00024ab180550 Zm00024ab180550_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00024ab180550 Zm00024ab180550_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab180560 Zm00024ab180560_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab180760 Zm00024ab180760_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab180770 Zm00024ab180770_P001 expected PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00024ab180880 Zm00024ab180880_P001 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab181060 Zm00024ab181060_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab181060 Zm00024ab181060_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00024ab181170 Zm00024ab181170_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab181180 Zm00024ab181180_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab181200 Zm00024ab181200_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab181540 Zm00024ab181540_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab181700 Zm00024ab181700_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab181700 Zm00024ab181700_P001 expected PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab181780 Zm00024ab181780_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab181790 Zm00024ab181790_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab181940 Zm00024ab181940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab181940 Zm00024ab181940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab181940 Zm00024ab181940_P001 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P001 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P002 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P002 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P003 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00024ab182020 Zm00024ab182020_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab182050 Zm00024ab182050_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab182050 Zm00024ab182050_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab182050 Zm00024ab182050_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab182050 Zm00024ab182050_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00024ab182050 Zm00024ab182050_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab182060 Zm00024ab182060_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab182060 Zm00024ab182060_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab182060 Zm00024ab182060_P003 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab182060 Zm00024ab182060_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab182120 Zm00024ab182120_P001 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab182220 Zm00024ab182220_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab182400 Zm00024ab182400_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P004 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab182590 Zm00024ab182590_P005 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab182620 Zm00024ab182620_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab182620 Zm00024ab182620_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab182620 Zm00024ab182620_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab182640 Zm00024ab182640_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00024ab182710 Zm00024ab182710_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab182860 Zm00024ab182860_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab182860 Zm00024ab182860_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab182920 Zm00024ab182920_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab182920 Zm00024ab182920_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab182920 Zm00024ab182920_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab182920 Zm00024ab182920_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab182920 Zm00024ab182920_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab182920 Zm00024ab182920_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab182920 Zm00024ab182920_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00024ab182920 Zm00024ab182920_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183050 Zm00024ab183050_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183050 Zm00024ab183050_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183050 Zm00024ab183050_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183060 Zm00024ab183060_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183060 Zm00024ab183060_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab183060 Zm00024ab183060_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab183090 Zm00024ab183090_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab183090 Zm00024ab183090_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab183090 Zm00024ab183090_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab183220 Zm00024ab183220_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab183220 Zm00024ab183220_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab183220 Zm00024ab183220_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab183380 Zm00024ab183380_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab183400 Zm00024ab183400_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab183400 Zm00024ab183400_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab183610 Zm00024ab183610_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab183610 Zm00024ab183610_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab183620 Zm00024ab183620_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab183880 Zm00024ab183880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab183880 Zm00024ab183880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab183880 Zm00024ab183880_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab183890 Zm00024ab183890_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab183890 Zm00024ab183890_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab183970 Zm00024ab183970_P004 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab184410 Zm00024ab184410_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab184410 Zm00024ab184410_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab184410 Zm00024ab184410_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab184410 Zm00024ab184410_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab184410 Zm00024ab184410_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab184460 Zm00024ab184460_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab184460 Zm00024ab184460_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab185020 Zm00024ab185020_P001 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185090 Zm00024ab185090_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab185100 Zm00024ab185100_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab185430 Zm00024ab185430_P001 NA PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab185620 Zm00024ab185620_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab185620 Zm00024ab185620_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab185620 Zm00024ab185620_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab185750 Zm00024ab185750_P002 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab185950 Zm00024ab185950_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00024ab185950 Zm00024ab185950_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab185950 Zm00024ab185950_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00024ab185950 Zm00024ab185950_P002 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00024ab186070 Zm00024ab186070_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab186230 Zm00024ab186230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab186230 Zm00024ab186230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab186230 Zm00024ab186230_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab186270 Zm00024ab186270_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab186270 Zm00024ab186270_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab186270 Zm00024ab186270_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab186340 Zm00024ab186340_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab186560 Zm00024ab186560_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab186740 Zm00024ab186740_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab186970 Zm00024ab186970_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab187150 Zm00024ab187150_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab187150 Zm00024ab187150_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab187150 Zm00024ab187150_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab187170 Zm00024ab187170_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab187170 Zm00024ab187170_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab187180 Zm00024ab187180_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab187310 Zm00024ab187310_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab187480 Zm00024ab187480_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P004 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P005 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab187580 Zm00024ab187580_P005 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.71-RXN EC-2.1.1.71 Zm00024ab187620 Zm00024ab187620_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.71-RXN EC-2.1.1.71 Zm00024ab187620 Zm00024ab187620_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV RXN4FS-2 EC-2.1.1.71 Zm00024ab187620 Zm00024ab187620_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab187720 Zm00024ab187720_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab187720 Zm00024ab187720_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab187720 Zm00024ab187720_P003 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab187720 Zm00024ab187720_P004 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab187720 Zm00024ab187720_P005 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab187960 Zm00024ab187960_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab188040 Zm00024ab188040_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab188090 Zm00024ab188090_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab188090 Zm00024ab188090_P001 NA PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00024ab188100 Zm00024ab188100_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab188190 Zm00024ab188190_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab188200 Zm00024ab188200_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00024ab188260 Zm00024ab188260_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00024ab188260 Zm00024ab188260_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab188380 Zm00024ab188380_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab188460 Zm00024ab188460_P001 ubiquitous PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab188610 Zm00024ab188610_P002 NA PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00024ab188750 Zm00024ab188750_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00024ab188750 Zm00024ab188750_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00024ab188750 Zm00024ab188750_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab188810 Zm00024ab188810_P005 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab189140 Zm00024ab189140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab189170 Zm00024ab189170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab189170 Zm00024ab189170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab189170 Zm00024ab189170_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189440 Zm00024ab189440_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189440 Zm00024ab189440_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189440 Zm00024ab189440_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189440 Zm00024ab189440_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189450 Zm00024ab189450_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189450 Zm00024ab189450_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189450 Zm00024ab189450_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab189450 Zm00024ab189450_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab189470 Zm00024ab189470_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab189470 Zm00024ab189470_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab189470 Zm00024ab189470_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab189470 Zm00024ab189470_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab189470 Zm00024ab189470_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab189470 Zm00024ab189470_P001 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab189610 Zm00024ab189610_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab189610 Zm00024ab189610_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab189610 Zm00024ab189610_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab189610 Zm00024ab189610_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00024ab189720 Zm00024ab189720_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab189800 Zm00024ab189800_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab189800 Zm00024ab189800_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab189810 Zm00024ab189810_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00024ab189820 Zm00024ab189820_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00024ab189820 Zm00024ab189820_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab189900 Zm00024ab189900_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab190020 Zm00024ab190020_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab190020 Zm00024ab190020_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab190020 Zm00024ab190020_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab190030 Zm00024ab190030_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00024ab190140 Zm00024ab190140_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab190140 Zm00024ab190140_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab190140 Zm00024ab190140_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00024ab190140 Zm00024ab190140_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab190140 Zm00024ab190140_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab190140 Zm00024ab190140_P002 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab190320 Zm00024ab190320_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab190620 Zm00024ab190620_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab190620 Zm00024ab190620_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab190620 Zm00024ab190620_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab190620 Zm00024ab190620_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00024ab190730 Zm00024ab190730_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00024ab190730 Zm00024ab190730_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab191250 Zm00024ab191250_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab191260 Zm00024ab191260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab191260 Zm00024ab191260_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab191440 Zm00024ab191440_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab191440 Zm00024ab191440_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab191510 Zm00024ab191510_P001 NA CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab191540 Zm00024ab191540_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab191560 Zm00024ab191560_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab191560 Zm00024ab191560_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab191570 Zm00024ab191570_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab191580 Zm00024ab191580_P001 NA PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00024ab191650 Zm00024ab191650_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab191710 Zm00024ab191710_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab191840 Zm00024ab191840_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab191840 Zm00024ab191840_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab191850 Zm00024ab191850_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab191860 Zm00024ab191860_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab191870 Zm00024ab191870_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab191930 Zm00024ab191930_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab191960 Zm00024ab191960_P001 NA PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00024ab192110 Zm00024ab192110_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00024ab192110 Zm00024ab192110_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab192220 Zm00024ab192220_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab192240 Zm00024ab192240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab192250 Zm00024ab192250_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab192300 Zm00024ab192300_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab192330 Zm00024ab192330_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab192420 Zm00024ab192420_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab192420 Zm00024ab192420_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab192420 Zm00024ab192420_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab192420 Zm00024ab192420_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab192500 Zm00024ab192500_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab192610 Zm00024ab192610_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab192610 Zm00024ab192610_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab192650 Zm00024ab192650_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab192650 Zm00024ab192650_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab192650 Zm00024ab192650_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOSAMINEPNACETYLTRANS-RXN EC-2.3.1.4 Zm00024ab192680 Zm00024ab192680_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab193250 Zm00024ab193250_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab193250 Zm00024ab193250_P001 expected PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab193310 Zm00024ab193310_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab193430 Zm00024ab193430_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab193430 Zm00024ab193430_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab193430 Zm00024ab193430_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab193540 Zm00024ab193540_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab193540 Zm00024ab193540_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab193560 Zm00024ab193560_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab193570 Zm00024ab193570_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab193580 Zm00024ab193580_P001 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab193630 Zm00024ab193630_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab193750 Zm00024ab193750_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab193910 Zm00024ab193910_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab193910 Zm00024ab193910_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab193910 Zm00024ab193910_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab193910 Zm00024ab193910_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab193920 Zm00024ab193920_P001 expected PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00024ab194030 Zm00024ab194030_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00024ab194040 Zm00024ab194040_P006 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab194420 Zm00024ab194420_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab194420 Zm00024ab194420_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab194420 Zm00024ab194420_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab194440 Zm00024ab194440_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab194470 Zm00024ab194470_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab194560 Zm00024ab194560_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab194560 Zm00024ab194560_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab194560 Zm00024ab194560_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab194560 Zm00024ab194560_P002 ubiquitous PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00024ab194760 Zm00024ab194760_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00024ab194760 Zm00024ab194760_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00024ab194760 Zm00024ab194760_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00024ab194760 Zm00024ab194760_P001 excluded PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab194800 Zm00024ab194800_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab194860 Zm00024ab194860_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab195060 Zm00024ab195060_P001 viridiplantae PWY-5307 gentiodelphin biosynthesis RXN-8233 EC-2.3.1.153 Zm00024ab195590 Zm00024ab195590_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab195710 Zm00024ab195710_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab195710 Zm00024ab195710_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab195710 Zm00024ab195710_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab195710 Zm00024ab195710_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab195710 Zm00024ab195710_P001 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab195730 Zm00024ab195730_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab195730 Zm00024ab195730_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab195730 Zm00024ab195730_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab195840 Zm00024ab195840_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab195840 Zm00024ab195840_P002 expected LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab196060 Zm00024ab196060_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab196060 Zm00024ab196060_P001 NA PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab196220 Zm00024ab196220_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab196220 Zm00024ab196220_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab196220 Zm00024ab196220_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab196220 Zm00024ab196220_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab196300 Zm00024ab196300_P002 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab196310 Zm00024ab196310_P004 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab196540 Zm00024ab196540_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab196540 Zm00024ab196540_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab196680 Zm00024ab196680_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00024ab196840 Zm00024ab196840_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab197160 Zm00024ab197160_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab197460 Zm00024ab197460_P001 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P002 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00024ab197510 Zm00024ab197510_P002 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab197570 Zm00024ab197570_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab197570 Zm00024ab197570_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab197570 Zm00024ab197570_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab197570 Zm00024ab197570_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab197570 Zm00024ab197570_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab197620 Zm00024ab197620_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab197670 Zm00024ab197670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab197670 Zm00024ab197670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab197670 Zm00024ab197670_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab197670 Zm00024ab197670_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00024ab197700 Zm00024ab197700_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00024ab197700 Zm00024ab197700_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab197840 Zm00024ab197840_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab197860 Zm00024ab197860_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab197900 Zm00024ab197900_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab197900 Zm00024ab197900_P002 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00024ab197940 Zm00024ab197940_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab197960 Zm00024ab197960_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab197960 Zm00024ab197960_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab197960 Zm00024ab197960_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab197980 Zm00024ab197980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab198160 Zm00024ab198160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198160 Zm00024ab198160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198160 Zm00024ab198160_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab198190 Zm00024ab198190_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab198210 Zm00024ab198210_P001 expected PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00024ab198270 Zm00024ab198270_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00024ab198270 Zm00024ab198270_P001 NA PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab198330 Zm00024ab198330_P001 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab198330 Zm00024ab198330_P002 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab198330 Zm00024ab198330_P003 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab198330 Zm00024ab198330_P004 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab198330 Zm00024ab198330_P005 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab198460 Zm00024ab198460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab198460 Zm00024ab198460_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab198510 Zm00024ab198510_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab198560 Zm00024ab198560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198560 Zm00024ab198560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198560 Zm00024ab198560_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab198570 Zm00024ab198570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198570 Zm00024ab198570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab198570 Zm00024ab198570_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab198790 Zm00024ab198790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab198790 Zm00024ab198790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab198790 Zm00024ab198790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab198800 Zm00024ab198800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab198800 Zm00024ab198800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab198800 Zm00024ab198800_P001 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab198820 Zm00024ab198820_P001 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab198820 Zm00024ab198820_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab198930 Zm00024ab198930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab198930 Zm00024ab198930_P002 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00024ab198940 Zm00024ab198940_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00024ab198940 Zm00024ab198940_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab198990 Zm00024ab198990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab198990 Zm00024ab198990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab198990 Zm00024ab198990_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab199010 Zm00024ab199010_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab199010 Zm00024ab199010_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab199010 Zm00024ab199010_P001 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab199080 Zm00024ab199080_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab199080 Zm00024ab199080_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab199140 Zm00024ab199140_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab199160 Zm00024ab199160_P004 NA PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00024ab199400 Zm00024ab199400_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00024ab199510 Zm00024ab199510_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00024ab199510 Zm00024ab199510_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab199560 Zm00024ab199560_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab199560 Zm00024ab199560_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab199560 Zm00024ab199560_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab199560 Zm00024ab199560_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab199560 Zm00024ab199560_P005 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab199620 Zm00024ab199620_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab199640 Zm00024ab199640_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab199820 Zm00024ab199820_P001 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00024ab199880 Zm00024ab199880_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00024ab199880 Zm00024ab199880_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00024ab199880 Zm00024ab199880_P001 conditional PWY-5139 pelargonidin conjugates biosynthesis RXN-7832 EC-2.4.1.116 Zm00024ab199890 Zm00024ab199890_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab199900 Zm00024ab199900_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab199900 Zm00024ab199900_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab199930 Zm00024ab199930_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab199990 Zm00024ab199990_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab199990 Zm00024ab199990_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab199990 Zm00024ab199990_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab199990 Zm00024ab199990_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab200010 Zm00024ab200010_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab200010 Zm00024ab200010_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab200010 Zm00024ab200010_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab200010 Zm00024ab200010_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab200040 Zm00024ab200040_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab200040 Zm00024ab200040_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab200040 Zm00024ab200040_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab200040 Zm00024ab200040_P001 NA PWYQT-4433 CA1P biosynthesis 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN EC-3.1.3.63 Zm00024ab200170 Zm00024ab200170_P001 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab200420 Zm00024ab200420_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab200420 Zm00024ab200420_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab200420 Zm00024ab200420_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab200420 Zm00024ab200420_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab200780 Zm00024ab200780_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab200780 Zm00024ab200780_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab200910 Zm00024ab200910_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab200910 Zm00024ab200910_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab200910 Zm00024ab200910_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab200910 Zm00024ab200910_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab200990 Zm00024ab200990_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab201000 Zm00024ab201000_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab201010 Zm00024ab201010_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab201090 Zm00024ab201090_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab201090 Zm00024ab201090_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab201090 Zm00024ab201090_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201300 Zm00024ab201300_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201340 Zm00024ab201340_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201340 Zm00024ab201340_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab201340 Zm00024ab201340_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab201340 Zm00024ab201340_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab201570 Zm00024ab201570_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab201730 Zm00024ab201730_P001 excluded PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00024ab202260 Zm00024ab202260_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab202360 Zm00024ab202360_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab202370 Zm00024ab202370_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab202370 Zm00024ab202370_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab202390 Zm00024ab202390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab202390 Zm00024ab202390_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab202430 Zm00024ab202430_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab202430 Zm00024ab202430_P002 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab202550 Zm00024ab202550_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202760 Zm00024ab202760_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202760 Zm00024ab202760_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202760 Zm00024ab202760_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202760 Zm00024ab202760_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202760 Zm00024ab202760_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00024ab202760 Zm00024ab202760_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00024ab202770 Zm00024ab202770_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab202770 Zm00024ab202770_P002 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00024ab202770 Zm00024ab202770_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab202900 Zm00024ab202900_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab202990 Zm00024ab202990_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab203150 Zm00024ab203150_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab203150 Zm00024ab203150_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab203240 Zm00024ab203240_P001 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab203440 Zm00024ab203440_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab203440 Zm00024ab203440_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab203440 Zm00024ab203440_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab203440 Zm00024ab203440_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab203510 Zm00024ab203510_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab203880 Zm00024ab203880_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab203880 Zm00024ab203880_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab203890 Zm00024ab203890_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab203890 Zm00024ab203890_P001 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab203930 Zm00024ab203930_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab203930 Zm00024ab203930_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab204110 Zm00024ab204110_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab204110 Zm00024ab204110_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab204110 Zm00024ab204110_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab204110 Zm00024ab204110_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab204200 Zm00024ab204200_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P003 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P004 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab204240 Zm00024ab204240_P005 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab204260 Zm00024ab204260_P001 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab204320 Zm00024ab204320_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab204320 Zm00024ab204320_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab204320 Zm00024ab204320_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab204540 Zm00024ab204540_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab204590 Zm00024ab204590_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab204590 Zm00024ab204590_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab204640 Zm00024ab204640_P001 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab204750 Zm00024ab204750_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab204750 Zm00024ab204750_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab204750 Zm00024ab204750_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab204750 Zm00024ab204750_P001 manual ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab204770 Zm00024ab204770_P001 ubiquitous PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab204790 Zm00024ab204790_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab204980 Zm00024ab204980_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab204980 Zm00024ab204980_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab205030 Zm00024ab205030_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab205030 Zm00024ab205030_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab205040 Zm00024ab205040_P001 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab205070 Zm00024ab205070_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab205110 Zm00024ab205110_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab205120 Zm00024ab205120_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab205200 Zm00024ab205200_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab205290 Zm00024ab205290_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab205380 Zm00024ab205380_P003 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab205430 Zm00024ab205430_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab205430 Zm00024ab205430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab205440 Zm00024ab205440_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab205450 Zm00024ab205450_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab205450 Zm00024ab205450_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab205450 Zm00024ab205450_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab205940 Zm00024ab205940_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab205950 Zm00024ab205950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab205970 Zm00024ab205970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab205970 Zm00024ab205970_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab206130 Zm00024ab206130_P001 viridiplantae PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab206180 Zm00024ab206180_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab206180 Zm00024ab206180_P001 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab206460 Zm00024ab206460_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab206690 Zm00024ab206690_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab206690 Zm00024ab206690_P002 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab206860 Zm00024ab206860_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab206860 Zm00024ab206860_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab206860 Zm00024ab206860_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab206870 Zm00024ab206870_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab206950 Zm00024ab206950_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab206950 Zm00024ab206950_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00024ab207360 Zm00024ab207360_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P004 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P005 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P005 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P006 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P006 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P007 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P007 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P008 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P008 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P008 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab207580 Zm00024ab207580_P009 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P009 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab207580 Zm00024ab207580_P009 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab207680 Zm00024ab207680_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab207680 Zm00024ab207680_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab207680 Zm00024ab207680_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab207800 Zm00024ab207800_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab207910 Zm00024ab207910_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab207910 Zm00024ab207910_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab207910 Zm00024ab207910_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab207910 Zm00024ab207910_P001 conditional PWY-6930 phenolic malonylglucosides biosynthesis RXN-12696 EC-2.4.1.35 Zm00024ab207920 Zm00024ab207920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab208290 Zm00024ab208290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab208290 Zm00024ab208290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab208290 Zm00024ab208290_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab208300 Zm00024ab208300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab208300 Zm00024ab208300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab208300 Zm00024ab208300_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab208600 Zm00024ab208600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab208600 Zm00024ab208600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab208600 Zm00024ab208600_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab208630 Zm00024ab208630_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00024ab208670 Zm00024ab208670_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00024ab208670 Zm00024ab208670_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab209120 Zm00024ab209120_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab209120 Zm00024ab209120_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab209120 Zm00024ab209120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab209120 Zm00024ab209120_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab209120 Zm00024ab209120_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab209130 Zm00024ab209130_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00024ab209410 Zm00024ab209410_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00024ab209410 Zm00024ab209410_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00024ab209410 Zm00024ab209410_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab209530 Zm00024ab209530_P003 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab209570 Zm00024ab209570_P003 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab209830 Zm00024ab209830_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab209830 Zm00024ab209830_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab209830 Zm00024ab209830_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab209830 Zm00024ab209830_P004 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab209850 Zm00024ab209850_P001 expected PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab209870 Zm00024ab209870_P001 NA PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab209990 Zm00024ab209990_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab210200 Zm00024ab210200_P001 NA PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab210380 Zm00024ab210380_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab210380 Zm00024ab210380_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab210380 Zm00024ab210380_P001 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab210620 Zm00024ab210620_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00024ab210650 Zm00024ab210650_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00024ab210650 Zm00024ab210650_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00024ab210650 Zm00024ab210650_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab210670 Zm00024ab210670_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab210700 Zm00024ab210700_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab210700 Zm00024ab210700_P002 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab210750 Zm00024ab210750_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab210750 Zm00024ab210750_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab210750 Zm00024ab210750_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab210750 Zm00024ab210750_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab210920 Zm00024ab210920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab210920 Zm00024ab210920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab210920 Zm00024ab210920_P001 conditional PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00024ab211090 Zm00024ab211090_P001 expected PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab211540 Zm00024ab211540_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8342 EC-2.8.1.12 Zm00024ab211550 Zm00024ab211550_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab211560 Zm00024ab211560_P002 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab211640 Zm00024ab211640_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab211670 Zm00024ab211670_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab211670 Zm00024ab211670_P002 excluded PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab211680 Zm00024ab211680_P001 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab211690 Zm00024ab211690_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab211700 Zm00024ab211700_P001 expected PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab211810 Zm00024ab211810_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab211810 Zm00024ab211810_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab211840 Zm00024ab211840_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab211840 Zm00024ab211840_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab211920 Zm00024ab211920_P001 conditional PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00024ab212000 Zm00024ab212000_P001 expected PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab212170 Zm00024ab212170_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab212170 Zm00024ab212170_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab212170 Zm00024ab212170_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab212320 Zm00024ab212320_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab212320 Zm00024ab212320_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab212320 Zm00024ab212320_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab212320 Zm00024ab212320_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab212340 Zm00024ab212340_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab212340 Zm00024ab212340_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab212390 Zm00024ab212390_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab212390 Zm00024ab212390_P002 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab212390 Zm00024ab212390_P003 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab212390 Zm00024ab212390_P004 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab212390 Zm00024ab212390_P005 conditional PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00024ab212700 Zm00024ab212700_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00024ab212700 Zm00024ab212700_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00024ab212910 Zm00024ab212910_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00024ab212910 Zm00024ab212910_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00024ab212910 Zm00024ab212910_P003 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab213290 Zm00024ab213290_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab213310 Zm00024ab213310_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00024ab213350 Zm00024ab213350_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00024ab213350 Zm00024ab213350_P002 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab213440 Zm00024ab213440_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab213450 Zm00024ab213450_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab213450 Zm00024ab213450_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab213450 Zm00024ab213450_P003 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab213500 Zm00024ab213500_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab213500 Zm00024ab213500_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab213500 Zm00024ab213500_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab213500 Zm00024ab213500_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab213770 Zm00024ab213770_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab213950 Zm00024ab213950_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab213950 Zm00024ab213950_P001 ubiquitous THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab214130 Zm00024ab214130_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation D-XYLULOSE-REDUCTASE-RXN EC-1.1.1.9 Zm00024ab214170 Zm00024ab214170_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab214340 Zm00024ab214340_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab214400 Zm00024ab214400_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab214400 Zm00024ab214400_P002 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab214700 Zm00024ab214700_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab214870 Zm00024ab214870_P001 ubiquitous TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab214890 Zm00024ab214890_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab215000 Zm00024ab215000_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab215000 Zm00024ab215000_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab215110 Zm00024ab215110_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab215260 Zm00024ab215260_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab215260 Zm00024ab215260_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab215260 Zm00024ab215260_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab215330 Zm00024ab215330_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab215330 Zm00024ab215330_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab215340 Zm00024ab215340_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab215350 Zm00024ab215350_P001 conditional PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00024ab215470 Zm00024ab215470_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab215620 Zm00024ab215620_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab215630 Zm00024ab215630_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab215630 Zm00024ab215630_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00024ab215670 Zm00024ab215670_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab215700 Zm00024ab215700_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab215700 Zm00024ab215700_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab215700 Zm00024ab215700_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab215700 Zm00024ab215700_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab215770 Zm00024ab215770_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab215770 Zm00024ab215770_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab215830 Zm00024ab215830_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab215980 Zm00024ab215980_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab215990 Zm00024ab215990_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab216080 Zm00024ab216080_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00024ab216120 Zm00024ab216120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab216600 Zm00024ab216600_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00024ab216650 Zm00024ab216650_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab216760 Zm00024ab216760_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab216770 Zm00024ab216770_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab216770 Zm00024ab216770_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab216770 Zm00024ab216770_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab217040 Zm00024ab217040_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P002 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab217190 Zm00024ab217190_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab217210 Zm00024ab217210_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab217240 Zm00024ab217240_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00024ab217240 Zm00024ab217240_P001 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab217300 Zm00024ab217300_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab217300 Zm00024ab217300_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab217460 Zm00024ab217460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab217460 Zm00024ab217460_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab217460 Zm00024ab217460_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab217460 Zm00024ab217460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab217460 Zm00024ab217460_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab217490 Zm00024ab217490_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab217490 Zm00024ab217490_P002 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab217500 Zm00024ab217500_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab217530 Zm00024ab217530_P001 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab217590 Zm00024ab217590_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab217610 Zm00024ab217610_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab217610 Zm00024ab217610_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab217610 Zm00024ab217610_P003 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00024ab217690 Zm00024ab217690_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00024ab217690 Zm00024ab217690_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab217950 Zm00024ab217950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab217950 Zm00024ab217950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab217950 Zm00024ab217950_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00024ab218030 Zm00024ab218030_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00024ab218030 Zm00024ab218030_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab218180 Zm00024ab218180_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab218190 Zm00024ab218190_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab218190 Zm00024ab218190_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00024ab218190 Zm00024ab218190_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab218430 Zm00024ab218430_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab218430 Zm00024ab218430_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab218430 Zm00024ab218430_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab218430 Zm00024ab218430_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00024ab218430 Zm00024ab218430_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab218460 Zm00024ab218460_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab218500 Zm00024ab218500_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab218500 Zm00024ab218500_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab218500 Zm00024ab218500_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab218500 Zm00024ab218500_P002 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P002 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P003 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P003 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab218680 Zm00024ab218680_P003 expected PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab219240 Zm00024ab219240_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab219280 Zm00024ab219280_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab219280 Zm00024ab219280_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab219280 Zm00024ab219280_P001 NA PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab219370 Zm00024ab219370_P002 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00024ab219470 Zm00024ab219470_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab219520 Zm00024ab219520_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab219860 Zm00024ab219860_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab219970 Zm00024ab219970_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab219970 Zm00024ab219970_P001 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00024ab220110 Zm00024ab220110_P003 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab220140 Zm00024ab220140_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab220140 Zm00024ab220140_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab220140 Zm00024ab220140_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab220140 Zm00024ab220140_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab220150 Zm00024ab220150_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab220150 Zm00024ab220150_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab220200 Zm00024ab220200_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab220230 Zm00024ab220230_P001 NA PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab220300 Zm00024ab220300_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab220350 Zm00024ab220350_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00024ab220380 Zm00024ab220380_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00024ab220380 Zm00024ab220380_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00024ab220380 Zm00024ab220380_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab220410 Zm00024ab220410_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab220410 Zm00024ab220410_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab220410 Zm00024ab220410_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab220650 Zm00024ab220650_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab220650 Zm00024ab220650_P001 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab220670 Zm00024ab220670_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab220670 Zm00024ab220670_P002 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab220750 Zm00024ab220750_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab220950 Zm00024ab220950_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab220950 Zm00024ab220950_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab220950 Zm00024ab220950_P003 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab221270 Zm00024ab221270_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00024ab221620 Zm00024ab221620_P002 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00024ab221670 Zm00024ab221670_P001 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab221720 Zm00024ab221720_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab221720 Zm00024ab221720_P001 ubiquitous PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab221810 Zm00024ab221810_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14026 EC-3.1.3.91 Zm00024ab221810 Zm00024ab221810_P001 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab221880 Zm00024ab221880_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab221880 Zm00024ab221880_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab221980 Zm00024ab221980_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab222020 Zm00024ab222020_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab222020 Zm00024ab222020_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab222020 Zm00024ab222020_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab222030 Zm00024ab222030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab222030 Zm00024ab222030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab222030 Zm00024ab222030_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab222110 Zm00024ab222110_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab222110 Zm00024ab222110_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab222110 Zm00024ab222110_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab222110 Zm00024ab222110_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab222390 Zm00024ab222390_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab222480 Zm00024ab222480_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab222480 Zm00024ab222480_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab222480 Zm00024ab222480_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab222760 Zm00024ab222760_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00024ab222900 Zm00024ab222900_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00024ab222900 Zm00024ab222900_P002 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab223290 Zm00024ab223290_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00024ab223590 Zm00024ab223590_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab223860 Zm00024ab223860_P001 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab224200 Zm00024ab224200_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab224250 Zm00024ab224250_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab224250 Zm00024ab224250_P001 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab224340 Zm00024ab224340_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab224350 Zm00024ab224350_P003 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab224370 Zm00024ab224370_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab224380 Zm00024ab224380_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab224380 Zm00024ab224380_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00024ab224380 Zm00024ab224380_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab224400 Zm00024ab224400_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab224620 Zm00024ab224620_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab224620 Zm00024ab224620_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab224620 Zm00024ab224620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab224620 Zm00024ab224620_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab224620 Zm00024ab224620_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab224810 Zm00024ab224810_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab224810 Zm00024ab224810_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00024ab224810 Zm00024ab224810_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00024ab224810 Zm00024ab224810_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab225130 Zm00024ab225130_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab225210 Zm00024ab225210_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab225220 Zm00024ab225220_P003 ubiquitous PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab225570 Zm00024ab225570_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab225570 Zm00024ab225570_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab225670 Zm00024ab225670_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab225860 Zm00024ab225860_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab225890 Zm00024ab225890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab225890 Zm00024ab225890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab225890 Zm00024ab225890_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab226090 Zm00024ab226090_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab226160 Zm00024ab226160_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab226310 Zm00024ab226310_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab226310 Zm00024ab226310_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab226310 Zm00024ab226310_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab226420 Zm00024ab226420_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab226550 Zm00024ab226550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab226550 Zm00024ab226550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab226550 Zm00024ab226550_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab226780 Zm00024ab226780_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab226810 Zm00024ab226810_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab226870 Zm00024ab226870_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab226960 Zm00024ab226960_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab226960 Zm00024ab226960_P002 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab226980 Zm00024ab226980_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab226980 Zm00024ab226980_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab226980 Zm00024ab226980_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab226980 Zm00024ab226980_P001 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P004 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P005 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P005 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P005 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P006 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P006 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P006 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P006 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P007 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P007 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P007 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P007 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P008 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P008 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P008 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P008 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P009 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P009 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P009 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227050 Zm00024ab227050_P009 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227060 Zm00024ab227060_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab227060 Zm00024ab227060_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227060 Zm00024ab227060_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab227060 Zm00024ab227060_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab227210 Zm00024ab227210_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab227210 Zm00024ab227210_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab227210 Zm00024ab227210_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab227210 Zm00024ab227210_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab227240 Zm00024ab227240_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab227240 Zm00024ab227240_P001 expected PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab227310 Zm00024ab227310_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab227320 Zm00024ab227320_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab227650 Zm00024ab227650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab227650 Zm00024ab227650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab227650 Zm00024ab227650_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227830 Zm00024ab227830_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227830 Zm00024ab227830_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227830 Zm00024ab227830_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227830 Zm00024ab227830_P004 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227850 Zm00024ab227850_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227850 Zm00024ab227850_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00024ab227850 Zm00024ab227850_P003 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00024ab227930 Zm00024ab227930_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab227950 Zm00024ab227950_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab228240 Zm00024ab228240_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab228540 Zm00024ab228540_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab228560 Zm00024ab228560_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab228600 Zm00024ab228600_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab228600 Zm00024ab228600_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab228640 Zm00024ab228640_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab228640 Zm00024ab228640_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab228640 Zm00024ab228640_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab228660 Zm00024ab228660_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab228780 Zm00024ab228780_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab228780 Zm00024ab228780_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab228820 Zm00024ab228820_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab228850 Zm00024ab228850_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab228970 Zm00024ab228970_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab228970 Zm00024ab228970_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab228990 Zm00024ab228990_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab228990 Zm00024ab228990_P002 expected PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab229010 Zm00024ab229010_P001 conditional PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00024ab229100 Zm00024ab229100_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab229220 Zm00024ab229220_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab229340 Zm00024ab229340_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab229350 Zm00024ab229350_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab229350 Zm00024ab229350_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab229350 Zm00024ab229350_P003 ubiquitous PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00024ab229490 Zm00024ab229490_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab229500 Zm00024ab229500_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab229540 Zm00024ab229540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229540 Zm00024ab229540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229540 Zm00024ab229540_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab229560 Zm00024ab229560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229560 Zm00024ab229560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229560 Zm00024ab229560_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab229590 Zm00024ab229590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229590 Zm00024ab229590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229590 Zm00024ab229590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab229610 Zm00024ab229610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229610 Zm00024ab229610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab229610 Zm00024ab229610_P001 conditional PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00024ab230030 Zm00024ab230030_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab230100 Zm00024ab230100_P001 viridiplantae PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab230130 Zm00024ab230130_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab230130 Zm00024ab230130_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab230130 Zm00024ab230130_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab230130 Zm00024ab230130_P004 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00024ab230180 Zm00024ab230180_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P001 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00024ab230180 Zm00024ab230180_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab230180 Zm00024ab230180_P002 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab230340 Zm00024ab230340_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab230390 Zm00024ab230390_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00024ab230450 Zm00024ab230450_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00024ab230450 Zm00024ab230450_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab230460 Zm00024ab230460_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) PORPHOBILSYNTH-RXN EC-4.2.1.24 Zm00024ab230590 Zm00024ab230590_P001 viridiplantae PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00024ab230600 Zm00024ab230600_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00024ab230600 Zm00024ab230600_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00024ab230600 Zm00024ab230600_P002 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00024ab230600 Zm00024ab230600_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab230650 Zm00024ab230650_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00024ab230820 Zm00024ab230820_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab230850 Zm00024ab230850_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00024ab230860 Zm00024ab230860_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab230950 Zm00024ab230950_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab230950 Zm00024ab230950_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab230950 Zm00024ab230950_P001 NA PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00024ab231000 Zm00024ab231000_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab231090 Zm00024ab231090_P001 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab231120 Zm00024ab231120_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab231300 Zm00024ab231300_P001 NA PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab231360 Zm00024ab231360_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab231660 Zm00024ab231660_P001 NA PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab231700 Zm00024ab231700_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab231760 Zm00024ab231760_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab231760 Zm00024ab231760_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab231810 Zm00024ab231810_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab231810 Zm00024ab231810_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab231810 Zm00024ab231810_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab231810 Zm00024ab231810_P004 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab231960 Zm00024ab231960_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab231960 Zm00024ab231960_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab231960 Zm00024ab231960_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab231960 Zm00024ab231960_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab232060 Zm00024ab232060_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab232070 Zm00024ab232070_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab232090 Zm00024ab232090_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab232090 Zm00024ab232090_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab232140 Zm00024ab232140_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab232230 Zm00024ab232230_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab232230 Zm00024ab232230_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab232230 Zm00024ab232230_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab232230 Zm00024ab232230_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab232340 Zm00024ab232340_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab232340 Zm00024ab232340_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab232440 Zm00024ab232440_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab232440 Zm00024ab232440_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab232440 Zm00024ab232440_P001 conditional PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00024ab232460 Zm00024ab232460_P001 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00024ab232460 Zm00024ab232460_P002 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00024ab232460 Zm00024ab232460_P003 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232610 Zm00024ab232610_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232610 Zm00024ab232610_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232610 Zm00024ab232610_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232610 Zm00024ab232610_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232620 Zm00024ab232620_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232620 Zm00024ab232620_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232620 Zm00024ab232620_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab232620 Zm00024ab232620_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab232660 Zm00024ab232660_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab232660 Zm00024ab232660_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab232700 Zm00024ab232700_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab232700 Zm00024ab232700_P003 expected PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab232800 Zm00024ab232800_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab232800 Zm00024ab232800_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab232800 Zm00024ab232800_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab232800 Zm00024ab232800_P004 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab232830 Zm00024ab232830_P001 viridiplantae PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00024ab232950 Zm00024ab232950_P001 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00024ab232950 Zm00024ab232950_P002 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00024ab232960 Zm00024ab232960_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab232980 Zm00024ab232980_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab232980 Zm00024ab232980_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab232980 Zm00024ab232980_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab233070 Zm00024ab233070_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab233070 Zm00024ab233070_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab233260 Zm00024ab233260_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00024ab233330 Zm00024ab233330_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00024ab233330 Zm00024ab233330_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab233660 Zm00024ab233660_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00024ab233660 Zm00024ab233660_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00024ab233660 Zm00024ab233660_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00024ab233660 Zm00024ab233660_P001 expected BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab233720 Zm00024ab233720_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab233720 Zm00024ab233720_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab233720 Zm00024ab233720_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab233720 Zm00024ab233720_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab233720 Zm00024ab233720_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab233720 Zm00024ab233720_P002 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P001 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00024ab233760 Zm00024ab233760_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00024ab233760 Zm00024ab233760_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P003 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P003 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P003 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P003 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab233760 Zm00024ab233760_P003 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab233800 Zm00024ab233800_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab233800 Zm00024ab233800_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab233800 Zm00024ab233800_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab233820 Zm00024ab233820_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab233910 Zm00024ab233910_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab233910 Zm00024ab233910_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab233910 Zm00024ab233910_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab233910 Zm00024ab233910_P002 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab233920 Zm00024ab233920_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab233920 Zm00024ab233920_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00024ab233930 Zm00024ab233930_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00024ab233930 Zm00024ab233930_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab233950 Zm00024ab233950_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab234040 Zm00024ab234040_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab234040 Zm00024ab234040_P002 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab234290 Zm00024ab234290_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab234350 Zm00024ab234350_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab234380 Zm00024ab234380_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab234380 Zm00024ab234380_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab234380 Zm00024ab234380_P001 NA PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab234440 Zm00024ab234440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab234510 Zm00024ab234510_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab234570 Zm00024ab234570_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab234570 Zm00024ab234570_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab234570 Zm00024ab234570_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab234570 Zm00024ab234570_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab234570 Zm00024ab234570_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00024ab234980 Zm00024ab234980_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00024ab234980 Zm00024ab234980_P001 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00024ab235010 Zm00024ab235010_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00024ab235010 Zm00024ab235010_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00024ab235010 Zm00024ab235010_P003 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00024ab235010 Zm00024ab235010_P004 viridiplantae PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235270 Zm00024ab235270_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235280 Zm00024ab235280_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235300 Zm00024ab235300_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235330 Zm00024ab235330_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235340 Zm00024ab235340_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00024ab235370 Zm00024ab235370_P001 expected PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab235440 Zm00024ab235440_P002 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab235590 Zm00024ab235590_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab235600 Zm00024ab235600_P005 ubiquitous PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00024ab235980 Zm00024ab235980_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab236190 Zm00024ab236190_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTINLIG-RXN EC-6.3.4.15 Zm00024ab236350 Zm00024ab236350_P001 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab236360 Zm00024ab236360_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab236370 Zm00024ab236370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab236370 Zm00024ab236370_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab236480 Zm00024ab236480_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab236480 Zm00024ab236480_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab236480 Zm00024ab236480_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab236550 Zm00024ab236550_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab236550 Zm00024ab236550_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab236550 Zm00024ab236550_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00024ab236610 Zm00024ab236610_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab236650 Zm00024ab236650_P003 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab236710 Zm00024ab236710_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab236760 Zm00024ab236760_P003 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab236830 Zm00024ab236830_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab236880 Zm00024ab236880_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab236880 Zm00024ab236880_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab236880 Zm00024ab236880_P001 ubiquitous PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab236930 Zm00024ab236930_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab236930 Zm00024ab236930_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab236930 Zm00024ab236930_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab237040 Zm00024ab237040_P001 expected PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab237410 Zm00024ab237410_P001 NA PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00024ab237660 Zm00024ab237660_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab237840 Zm00024ab237840_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab237840 Zm00024ab237840_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab237840 Zm00024ab237840_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab237850 Zm00024ab237850_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab237850 Zm00024ab237850_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab238220 Zm00024ab238220_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab238220 Zm00024ab238220_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab238220 Zm00024ab238220_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab238220 Zm00024ab238220_P002 conditional PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab238450 Zm00024ab238450_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab238460 Zm00024ab238460_P001 expected PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab238500 Zm00024ab238500_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab238500 Zm00024ab238500_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab238530 Zm00024ab238530_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab238570 Zm00024ab238570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab238570 Zm00024ab238570_P002 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00024ab238780 Zm00024ab238780_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00024ab238780 Zm00024ab238780_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab239140 Zm00024ab239140_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab239750 Zm00024ab239750_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab239760 Zm00024ab239760_P001 expected GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab239840 Zm00024ab239840_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab239840 Zm00024ab239840_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00024ab239840 Zm00024ab239840_P001 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00024ab240310 Zm00024ab240310_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab240320 Zm00024ab240320_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab240320 Zm00024ab240320_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab240320 Zm00024ab240320_P001 ubiquitous TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00024ab240340 Zm00024ab240340_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab240600 Zm00024ab240600_P002 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab240640 Zm00024ab240640_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab240640 Zm00024ab240640_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab240640 Zm00024ab240640_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab240640 Zm00024ab240640_P001 NA PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab241260 Zm00024ab241260_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab241270 Zm00024ab241270_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab241290 Zm00024ab241290_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab241470 Zm00024ab241470_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab241470 Zm00024ab241470_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab241470 Zm00024ab241470_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab241470 Zm00024ab241470_P004 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00024ab241530 Zm00024ab241530_P004 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab241550 Zm00024ab241550_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab241570 Zm00024ab241570_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab241600 Zm00024ab241600_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab241600 Zm00024ab241600_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab241610 Zm00024ab241610_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab241610 Zm00024ab241610_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab241680 Zm00024ab241680_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab241680 Zm00024ab241680_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab241680 Zm00024ab241680_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab241680 Zm00024ab241680_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab241680 Zm00024ab241680_P001 viridiplantae PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00024ab241720 Zm00024ab241720_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00024ab241720 Zm00024ab241720_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab241940 Zm00024ab241940_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab241940 Zm00024ab241940_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab241940 Zm00024ab241940_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab242410 Zm00024ab242410_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab242410 Zm00024ab242410_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab242630 Zm00024ab242630_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab242630 Zm00024ab242630_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab242630 Zm00024ab242630_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab242880 Zm00024ab242880_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab242960 Zm00024ab242960_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab242960 Zm00024ab242960_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab242960 Zm00024ab242960_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab242960 Zm00024ab242960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243020 Zm00024ab243020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243020 Zm00024ab243020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243020 Zm00024ab243020_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243080 Zm00024ab243080_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab243100 Zm00024ab243100_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab243200 Zm00024ab243200_P002 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab243420 Zm00024ab243420_P001 expected PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P005 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P006 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P006 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P006 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab243520 Zm00024ab243520_P006 NA PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab243800 Zm00024ab243800_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab244020 Zm00024ab244020_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab244020 Zm00024ab244020_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab244020 Zm00024ab244020_P001 NA PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00024ab244030 Zm00024ab244030_P001 conditional PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00024ab244030 Zm00024ab244030_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00024ab244090 Zm00024ab244090_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab244090 Zm00024ab244090_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab244090 Zm00024ab244090_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab244200 Zm00024ab244200_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab244330 Zm00024ab244330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab244330 Zm00024ab244330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab244330 Zm00024ab244330_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab244370 Zm00024ab244370_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab244430 Zm00024ab244430_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244740 Zm00024ab244740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244740 Zm00024ab244740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244750 Zm00024ab244750_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244750 Zm00024ab244750_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244760 Zm00024ab244760_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244760 Zm00024ab244760_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244780 Zm00024ab244780_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244780 Zm00024ab244780_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244790 Zm00024ab244790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244790 Zm00024ab244790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244820 Zm00024ab244820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244820 Zm00024ab244820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244830 Zm00024ab244830_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244830 Zm00024ab244830_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244860 Zm00024ab244860_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244860 Zm00024ab244860_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244890 Zm00024ab244890_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244890 Zm00024ab244890_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244920 Zm00024ab244920_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244920 Zm00024ab244920_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab244930 Zm00024ab244930_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab244930 Zm00024ab244930_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab244970 Zm00024ab244970_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab245000 Zm00024ab245000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab245020 Zm00024ab245020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab245020 Zm00024ab245020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab245020 Zm00024ab245020_P001 conditional PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab245040 Zm00024ab245040_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00024ab245040 Zm00024ab245040_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00024ab245040 Zm00024ab245040_P001 expected PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00024ab245170 Zm00024ab245170_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00024ab245170 Zm00024ab245170_P001 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab245200 Zm00024ab245200_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab245220 Zm00024ab245220_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab245220 Zm00024ab245220_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab245220 Zm00024ab245220_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab245250 Zm00024ab245250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab245250 Zm00024ab245250_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00024ab245280 Zm00024ab245280_P001 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab245390 Zm00024ab245390_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab245390 Zm00024ab245390_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab245390 Zm00024ab245390_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab245390 Zm00024ab245390_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab245700 Zm00024ab245700_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab245700 Zm00024ab245700_P002 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab245780 Zm00024ab245780_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab245780 Zm00024ab245780_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab245860 Zm00024ab245860_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab245970 Zm00024ab245970_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab245970 Zm00024ab245970_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab246120 Zm00024ab246120_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab246120 Zm00024ab246120_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab246170 Zm00024ab246170_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00024ab246180 Zm00024ab246180_P001 viridiplantae PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab246450 Zm00024ab246450_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab246450 Zm00024ab246450_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab246570 Zm00024ab246570_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00024ab246570 Zm00024ab246570_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab246570 Zm00024ab246570_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00024ab246570 Zm00024ab246570_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00024ab246570 Zm00024ab246570_P001 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab246650 Zm00024ab246650_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab246650 Zm00024ab246650_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab246680 Zm00024ab246680_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab246680 Zm00024ab246680_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab246860 Zm00024ab246860_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab246880 Zm00024ab246880_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab246890 Zm00024ab246890_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00024ab247010 Zm00024ab247010_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab247060 Zm00024ab247060_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab247260 Zm00024ab247260_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab247550 Zm00024ab247550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab247710 Zm00024ab247710_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab247750 Zm00024ab247750_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab247750 Zm00024ab247750_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab247750 Zm00024ab247750_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab247750 Zm00024ab247750_P004 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab247780 Zm00024ab247780_P001 NA PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00024ab247840 Zm00024ab247840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab247900 Zm00024ab247900_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab248030 Zm00024ab248030_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab248140 Zm00024ab248140_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab248150 Zm00024ab248150_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab248160 Zm00024ab248160_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab248160 Zm00024ab248160_P002 conditional HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00024ab248260 Zm00024ab248260_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00024ab248320 Zm00024ab248320_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00024ab248320 Zm00024ab248320_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab248320 Zm00024ab248320_P004 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00024ab248380 Zm00024ab248380_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00024ab248380 Zm00024ab248380_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab248670 Zm00024ab248670_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00024ab248670 Zm00024ab248670_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab248670 Zm00024ab248670_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00024ab248670 Zm00024ab248670_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab248670 Zm00024ab248670_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00024ab248670 Zm00024ab248670_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab248740 Zm00024ab248740_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab248860 Zm00024ab248860_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab248980 Zm00024ab248980_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab249060 Zm00024ab249060_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab249340 Zm00024ab249340_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00024ab249530 Zm00024ab249530_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab249610 Zm00024ab249610_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab249610 Zm00024ab249610_P001 expected PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab249660 Zm00024ab249660_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab249870 Zm00024ab249870_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P003 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P004 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab250080 Zm00024ab250080_P004 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab250260 Zm00024ab250260_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab250260 Zm00024ab250260_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab250260 Zm00024ab250260_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab250320 Zm00024ab250320_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab250340 Zm00024ab250340_P001 conditional PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00024ab250490 Zm00024ab250490_P001 expected PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00024ab250500 Zm00024ab250500_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00024ab250510 Zm00024ab250510_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab250540 Zm00024ab250540_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab250540 Zm00024ab250540_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab250590 Zm00024ab250590_P001 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab250610 Zm00024ab250610_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab250610 Zm00024ab250610_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab250610 Zm00024ab250610_P003 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00024ab250710 Zm00024ab250710_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00024ab250710 Zm00024ab250710_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab250880 Zm00024ab250880_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab250880 Zm00024ab250880_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab250880 Zm00024ab250880_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab250880 Zm00024ab250880_P001 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab250920 Zm00024ab250920_P004 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab251060 Zm00024ab251060_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab251080 Zm00024ab251080_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab251350 Zm00024ab251350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab251440 Zm00024ab251440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab251440 Zm00024ab251440_P002 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab251510 Zm00024ab251510_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab251510 Zm00024ab251510_P001 NA PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab251580 Zm00024ab251580_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab251580 Zm00024ab251580_P001 conditional PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00024ab251620 Zm00024ab251620_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab251800 Zm00024ab251800_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab251800 Zm00024ab251800_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab251800 Zm00024ab251800_P001 NA PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab251880 Zm00024ab251880_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab252070 Zm00024ab252070_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00024ab252250 Zm00024ab252250_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00024ab252250 Zm00024ab252250_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00024ab252250 Zm00024ab252250_P001 conditional PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab252610 Zm00024ab252610_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab252610 Zm00024ab252610_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab253050 Zm00024ab253050_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab253050 Zm00024ab253050_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab253150 Zm00024ab253150_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab253150 Zm00024ab253150_P001 conditional LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab253160 Zm00024ab253160_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab253170 Zm00024ab253170_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab253170 Zm00024ab253170_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab253170 Zm00024ab253170_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00024ab253170 Zm00024ab253170_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab253580 Zm00024ab253580_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab253580 Zm00024ab253580_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab253580 Zm00024ab253580_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab253730 Zm00024ab253730_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab253730 Zm00024ab253730_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab253750 Zm00024ab253750_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab253980 Zm00024ab253980_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab254300 Zm00024ab254300_P002 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYRHAMREDUCT-RXN EC-1.1.1.133 Zm00024ab254440 Zm00024ab254440_P001 conditional DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYDRHAMEPIM-RXN EC-5.1.3.13 Zm00024ab254440 Zm00024ab254440_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab254510 Zm00024ab254510_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab254510 Zm00024ab254510_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab254510 Zm00024ab254510_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab254510 Zm00024ab254510_P002 expected PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab254740 Zm00024ab254740_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab254740 Zm00024ab254740_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab254740 Zm00024ab254740_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab254740 Zm00024ab254740_P001 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab254880 Zm00024ab254880_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00024ab255020 Zm00024ab255020_P001 viridiplantae PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00024ab255050 Zm00024ab255050_P001 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00024ab255050 Zm00024ab255050_P002 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00024ab255050 Zm00024ab255050_P003 expected GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00024ab255180 Zm00024ab255180_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00024ab255180 Zm00024ab255180_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab255320 Zm00024ab255320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab255320 Zm00024ab255320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab255320 Zm00024ab255320_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab255360 Zm00024ab255360_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab255360 Zm00024ab255360_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab255430 Zm00024ab255430_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab255430 Zm00024ab255430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab255470 Zm00024ab255470_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P003 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00024ab255540 Zm00024ab255540_P003 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab255590 Zm00024ab255590_P001 expected PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab255690 Zm00024ab255690_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00024ab255690 Zm00024ab255690_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab255880 Zm00024ab255880_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab255880 Zm00024ab255880_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00024ab255890 Zm00024ab255890_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab256010 Zm00024ab256010_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab256020 Zm00024ab256020_P001 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab256040 Zm00024ab256040_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P002 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P003 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab256270 Zm00024ab256270_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab256280 Zm00024ab256280_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab256280 Zm00024ab256280_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab256280 Zm00024ab256280_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab256280 Zm00024ab256280_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab256300 Zm00024ab256300_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab256320 Zm00024ab256320_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab256330 Zm00024ab256330_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab256330 Zm00024ab256330_P002 NA HISTSYN-PWY L-histidine biosynthesis HISTAMINOTRANS-RXN EC-2.6.1.9 Zm00024ab256380 Zm00024ab256380_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab256640 Zm00024ab256640_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab256640 Zm00024ab256640_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab256670 Zm00024ab256670_P001 ubiquitous PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab256700 Zm00024ab256700_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab256700 Zm00024ab256700_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab256740 Zm00024ab256740_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab256740 Zm00024ab256740_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab257300 Zm00024ab257300_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab257310 Zm00024ab257310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab257680 Zm00024ab257680_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab257740 Zm00024ab257740_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab257740 Zm00024ab257740_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab257740 Zm00024ab257740_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab257870 Zm00024ab257870_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab257870 Zm00024ab257870_P002 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab257880 Zm00024ab257880_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab257880 Zm00024ab257880_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab257880 Zm00024ab257880_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab257890 Zm00024ab257890_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab257890 Zm00024ab257890_P002 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab257950 Zm00024ab257950_P004 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab258020 Zm00024ab258020_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab258020 Zm00024ab258020_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab258170 Zm00024ab258170_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab258180 Zm00024ab258180_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab258310 Zm00024ab258310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab258310 Zm00024ab258310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab258310 Zm00024ab258310_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab258480 Zm00024ab258480_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab258600 Zm00024ab258600_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab258690 Zm00024ab258690_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab258690 Zm00024ab258690_P002 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab258700 Zm00024ab258700_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00024ab258990 Zm00024ab258990_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab259020 Zm00024ab259020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab259020 Zm00024ab259020_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab259170 Zm00024ab259170_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab259170 Zm00024ab259170_P002 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab259210 Zm00024ab259210_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab259210 Zm00024ab259210_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab259210 Zm00024ab259210_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab259210 Zm00024ab259210_P004 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00024ab259370 Zm00024ab259370_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00024ab259370 Zm00024ab259370_P003 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab259410 Zm00024ab259410_P001 expected PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00024ab259970 Zm00024ab259970_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab259990 Zm00024ab259990_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab260070 Zm00024ab260070_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab260290 Zm00024ab260290_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab260290 Zm00024ab260290_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab260290 Zm00024ab260290_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab260290 Zm00024ab260290_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab260590 Zm00024ab260590_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab260650 Zm00024ab260650_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab260650 Zm00024ab260650_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab260650 Zm00024ab260650_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab261110 Zm00024ab261110_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab261110 Zm00024ab261110_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab261110 Zm00024ab261110_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab261130 Zm00024ab261130_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab261130 Zm00024ab261130_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab261130 Zm00024ab261130_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab261170 Zm00024ab261170_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab261170 Zm00024ab261170_P001 expected PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00024ab261170 Zm00024ab261170_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00024ab261170 Zm00024ab261170_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation RXN-7913 EC-2.7.4.25 Zm00024ab261170 Zm00024ab261170_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab261170 Zm00024ab261170_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab261170 Zm00024ab261170_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab261190 Zm00024ab261190_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab261190 Zm00024ab261190_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab261190 Zm00024ab261190_P001 NA PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab261380 Zm00024ab261380_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab261380 Zm00024ab261380_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab261420 Zm00024ab261420_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab261420 Zm00024ab261420_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab261420 Zm00024ab261420_P002 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab261420 Zm00024ab261420_P002 NA PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab261650 Zm00024ab261650_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab261650 Zm00024ab261650_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab261650 Zm00024ab261650_P003 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab261740 Zm00024ab261740_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab261740 Zm00024ab261740_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00024ab261840 Zm00024ab261840_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab261890 Zm00024ab261890_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab262090 Zm00024ab262090_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab262090 Zm00024ab262090_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab262090 Zm00024ab262090_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab262090 Zm00024ab262090_P001 NA PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00024ab262220 Zm00024ab262220_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab262330 Zm00024ab262330_P002 NA PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00024ab262570 Zm00024ab262570_P001 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab262720 Zm00024ab262720_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab262720 Zm00024ab262720_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab262720 Zm00024ab262720_P001 NA GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab262860 Zm00024ab262860_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab262860 Zm00024ab262860_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab262860 Zm00024ab262860_P001 manual PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab262900 Zm00024ab262900_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab262900 Zm00024ab262900_P003 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00024ab263000 Zm00024ab263000_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00024ab263000 Zm00024ab263000_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00024ab263140 Zm00024ab263140_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00024ab263140 Zm00024ab263140_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab263150 Zm00024ab263150_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab263150 Zm00024ab263150_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab263150 Zm00024ab263150_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab263200 Zm00024ab263200_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab263200 Zm00024ab263200_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00024ab263300 Zm00024ab263300_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) RXN-2962 EC-1.1.1.284 Zm00024ab263300 Zm00024ab263300_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00024ab263310 Zm00024ab263310_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00024ab263310 Zm00024ab263310_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00024ab263470 Zm00024ab263470_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab263500 Zm00024ab263500_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab263570 Zm00024ab263570_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00024ab263710 Zm00024ab263710_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00024ab263710 Zm00024ab263710_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab264050 Zm00024ab264050_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab264200 Zm00024ab264200_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab264210 Zm00024ab264210_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab264320 Zm00024ab264320_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab264320 Zm00024ab264320_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab264320 Zm00024ab264320_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab264320 Zm00024ab264320_P001 NA PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00024ab264550 Zm00024ab264550_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab264670 Zm00024ab264670_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab264780 Zm00024ab264780_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab265070 Zm00024ab265070_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab265070 Zm00024ab265070_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab265070 Zm00024ab265070_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab265150 Zm00024ab265150_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab265150 Zm00024ab265150_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab265220 Zm00024ab265220_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab265290 Zm00024ab265290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab265290 Zm00024ab265290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab265290 Zm00024ab265290_P001 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab265310 Zm00024ab265310_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab265310 Zm00024ab265310_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab265310 Zm00024ab265310_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab265310 Zm00024ab265310_P001 NA PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab265400 Zm00024ab265400_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab265400 Zm00024ab265400_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab265400 Zm00024ab265400_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab265470 Zm00024ab265470_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00024ab265560 Zm00024ab265560_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab265870 Zm00024ab265870_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab265920 Zm00024ab265920_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab266030 Zm00024ab266030_P002 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab266170 Zm00024ab266170_P002 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00024ab266460 Zm00024ab266460_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00024ab266460 Zm00024ab266460_P001 NA PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab266470 Zm00024ab266470_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab266470 Zm00024ab266470_P001 excluded DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00024ab266590 Zm00024ab266590_P001 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00024ab266590 Zm00024ab266590_P001 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00024ab266590 Zm00024ab266590_P002 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00024ab266590 Zm00024ab266590_P002 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab266590 Zm00024ab266590_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab266590 Zm00024ab266590_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab266590 Zm00024ab266590_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab266590 Zm00024ab266590_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab267110 Zm00024ab267110_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab267110 Zm00024ab267110_P001 conditional PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00024ab267550 Zm00024ab267550_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab267630 Zm00024ab267630_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab267630 Zm00024ab267630_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab267630 Zm00024ab267630_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab267630 Zm00024ab267630_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab267630 Zm00024ab267630_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab267640 Zm00024ab267640_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab267640 Zm00024ab267640_P002 expected GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00024ab267660 Zm00024ab267660_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00024ab267660 Zm00024ab267660_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab269390 Zm00024ab269390_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab269390 Zm00024ab269390_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab269390 Zm00024ab269390_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab269390 Zm00024ab269390_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab269440 Zm00024ab269440_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab269440 Zm00024ab269440_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab269520 Zm00024ab269520_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab269520 Zm00024ab269520_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00024ab269550 Zm00024ab269550_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00024ab269550 Zm00024ab269550_P002 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab269610 Zm00024ab269610_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab269610 Zm00024ab269610_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab269770 Zm00024ab269770_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab269770 Zm00024ab269770_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab269770 Zm00024ab269770_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab269810 Zm00024ab269810_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab269830 Zm00024ab269830_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00024ab269840 Zm00024ab269840_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00024ab269840 Zm00024ab269840_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00024ab269840 Zm00024ab269840_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00024ab269890 Zm00024ab269890_P003 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab269910 Zm00024ab269910_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab269910 Zm00024ab269910_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00024ab269910 Zm00024ab269910_P001 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab270170 Zm00024ab270170_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab270170 Zm00024ab270170_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab270170 Zm00024ab270170_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab270170 Zm00024ab270170_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab270170 Zm00024ab270170_P005 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab270320 Zm00024ab270320_P001 expected PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00024ab270380 Zm00024ab270380_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00024ab270380 Zm00024ab270380_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00024ab270380 Zm00024ab270380_P003 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab270500 Zm00024ab270500_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab270500 Zm00024ab270500_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab270500 Zm00024ab270500_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab270500 Zm00024ab270500_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab271140 Zm00024ab271140_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab271140 Zm00024ab271140_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab271140 Zm00024ab271140_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab271140 Zm00024ab271140_P003 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab271170 Zm00024ab271170_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab271170 Zm00024ab271170_P002 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab271480 Zm00024ab271480_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab271480 Zm00024ab271480_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab271480 Zm00024ab271480_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab271590 Zm00024ab271590_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab271730 Zm00024ab271730_P001 viridiplantae PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00024ab272170 Zm00024ab272170_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00024ab272170 Zm00024ab272170_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00024ab272170 Zm00024ab272170_P003 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00024ab272170 Zm00024ab272170_P004 ubiquitous VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00024ab272530 Zm00024ab272530_P001 viridiplantae VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00024ab272530 Zm00024ab272530_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab272800 Zm00024ab272800_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab272810 Zm00024ab272810_P001 conditional PWY-7212 baicalein metabolism RXN-11755 EC-2.4.1.253 Zm00024ab272920 Zm00024ab272920_P001 conditional PWY-7213 wogonin metabolism RXN-14060 EC-2.4.1.253 Zm00024ab272920 Zm00024ab272920_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab273250 Zm00024ab273250_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab273270 Zm00024ab273270_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab273280 Zm00024ab273280_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab273300 Zm00024ab273300_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab273450 Zm00024ab273450_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab273450 Zm00024ab273450_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab273450 Zm00024ab273450_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab273450 Zm00024ab273450_P001 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab273780 Zm00024ab273780_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab273780 Zm00024ab273780_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab273820 Zm00024ab273820_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00024ab273830 Zm00024ab273830_P006 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab274070 Zm00024ab274070_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab274070 Zm00024ab274070_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab274070 Zm00024ab274070_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab274070 Zm00024ab274070_P001 NA PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab274140 Zm00024ab274140_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab274150 Zm00024ab274150_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab274370 Zm00024ab274370_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00024ab274770 Zm00024ab274770_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab274850 Zm00024ab274850_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab275140 Zm00024ab275140_P001 conditional PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00024ab275170 Zm00024ab275170_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab275210 Zm00024ab275210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab275210 Zm00024ab275210_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab275210 Zm00024ab275210_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab275290 Zm00024ab275290_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab275290 Zm00024ab275290_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab275430 Zm00024ab275430_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab275430 Zm00024ab275430_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab275450 Zm00024ab275450_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab275530 Zm00024ab275530_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab275530 Zm00024ab275530_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab275530 Zm00024ab275530_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab275530 Zm00024ab275530_P002 conditional PWY-5284 shisonin biosynthesis RXN-8204 EC-2.3.1.215 Zm00024ab275600 Zm00024ab275600_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8204 EC-2.3.1.215 Zm00024ab275600 Zm00024ab275600_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab275870 Zm00024ab275870_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab275930 Zm00024ab275930_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab275930 Zm00024ab275930_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab275930 Zm00024ab275930_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab276120 Zm00024ab276120_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab276120 Zm00024ab276120_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab276120 Zm00024ab276120_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab276130 Zm00024ab276130_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab276130 Zm00024ab276130_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab276130 Zm00024ab276130_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab276150 Zm00024ab276150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab276150 Zm00024ab276150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab276150 Zm00024ab276150_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab276310 Zm00024ab276310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab276310 Zm00024ab276310_P001 conditional PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab276340 Zm00024ab276340_P001 viridiplantae PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab276520 Zm00024ab276520_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab276530 Zm00024ab276530_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab276710 Zm00024ab276710_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab276710 Zm00024ab276710_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab276710 Zm00024ab276710_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab276710 Zm00024ab276710_P001 ubiquitous PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab276740 Zm00024ab276740_P001 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00024ab276850 Zm00024ab276850_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab276940 Zm00024ab276940_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab276940 Zm00024ab276940_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab276940 Zm00024ab276940_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab276940 Zm00024ab276940_P004 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab277070 Zm00024ab277070_P005 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab277100 Zm00024ab277100_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab277110 Zm00024ab277110_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab277170 Zm00024ab277170_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00024ab277550 Zm00024ab277550_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00024ab277570 Zm00024ab277570_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab277700 Zm00024ab277700_P001 viridiplantae PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00024ab277820 Zm00024ab277820_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab277820 Zm00024ab277820_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab277830 Zm00024ab277830_P001 conditional PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00024ab277890 Zm00024ab277890_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00024ab277890 Zm00024ab277890_P001 NA PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00024ab277970 Zm00024ab277970_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00024ab277970 Zm00024ab277970_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00024ab277970 Zm00024ab277970_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab278170 Zm00024ab278170_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab278180 Zm00024ab278180_P001 expected LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab278310 Zm00024ab278310_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab278460 Zm00024ab278460_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00024ab278980 Zm00024ab278980_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00024ab278980 Zm00024ab278980_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab279060 Zm00024ab279060_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab279060 Zm00024ab279060_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab279060 Zm00024ab279060_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab279230 Zm00024ab279230_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab279230 Zm00024ab279230_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab279230 Zm00024ab279230_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab279230 Zm00024ab279230_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab279280 Zm00024ab279280_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab279300 Zm00024ab279300_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab279310 Zm00024ab279310_P001 excluded PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00024ab279500 Zm00024ab279500_P001 NA PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab279670 Zm00024ab279670_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab279700 Zm00024ab279700_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab279840 Zm00024ab279840_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00024ab279840 Zm00024ab279840_P001 NA PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00024ab280000 Zm00024ab280000_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00024ab280000 Zm00024ab280000_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab280130 Zm00024ab280130_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab280130 Zm00024ab280130_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab280130 Zm00024ab280130_P001 ubiquitous PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab280210 Zm00024ab280210_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab280210 Zm00024ab280210_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab280360 Zm00024ab280360_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab280360 Zm00024ab280360_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab280360 Zm00024ab280360_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab280360 Zm00024ab280360_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-19838 EC-4.99.1.6 Zm00024ab280500 Zm00024ab280500_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab280570 Zm00024ab280570_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab280570 Zm00024ab280570_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab280570 Zm00024ab280570_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab280620 Zm00024ab280620_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab280620 Zm00024ab280620_P002 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab280750 Zm00024ab280750_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab280750 Zm00024ab280750_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab280750 Zm00024ab280750_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab281350 Zm00024ab281350_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab281370 Zm00024ab281370_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab281370 Zm00024ab281370_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab281370 Zm00024ab281370_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab281800 Zm00024ab281800_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab281800 Zm00024ab281800_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab281870 Zm00024ab281870_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab281870 Zm00024ab281870_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab281870 Zm00024ab281870_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab281870 Zm00024ab281870_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab281870 Zm00024ab281870_P001 NA PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab282010 Zm00024ab282010_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab282020 Zm00024ab282020_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab282030 Zm00024ab282030_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab282050 Zm00024ab282050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab282120 Zm00024ab282120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab282150 Zm00024ab282150_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab282230 Zm00024ab282230_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab282240 Zm00024ab282240_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab282240 Zm00024ab282240_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab282240 Zm00024ab282240_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab282450 Zm00024ab282450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab282450 Zm00024ab282450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab282450 Zm00024ab282450_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab282500 Zm00024ab282500_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab282530 Zm00024ab282530_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab282530 Zm00024ab282530_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab282530 Zm00024ab282530_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab282680 Zm00024ab282680_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab282680 Zm00024ab282680_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab282710 Zm00024ab282710_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab282710 Zm00024ab282710_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab282800 Zm00024ab282800_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab282920 Zm00024ab282920_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab283080 Zm00024ab283080_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab283080 Zm00024ab283080_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab283080 Zm00024ab283080_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab283160 Zm00024ab283160_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00024ab283230 Zm00024ab283230_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00024ab283230 Zm00024ab283230_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab283240 Zm00024ab283240_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab283320 Zm00024ab283320_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab283320 Zm00024ab283320_P001 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00024ab283380 Zm00024ab283380_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab283520 Zm00024ab283520_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab283540 Zm00024ab283540_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00024ab283600 Zm00024ab283600_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab283680 Zm00024ab283680_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab283730 Zm00024ab283730_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab283730 Zm00024ab283730_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab283730 Zm00024ab283730_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab283730 Zm00024ab283730_P002 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab283870 Zm00024ab283870_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00024ab283900 Zm00024ab283900_P001 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00024ab284020 Zm00024ab284020_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab284020 Zm00024ab284020_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab284020 Zm00024ab284020_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab284020 Zm00024ab284020_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab284020 Zm00024ab284020_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab284020 Zm00024ab284020_P001 NA PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00024ab284130 Zm00024ab284130_P001 expected LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab284160 Zm00024ab284160_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab284240 Zm00024ab284240_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab284240 Zm00024ab284240_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab284240 Zm00024ab284240_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab284240 Zm00024ab284240_P001 NA PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab284530 Zm00024ab284530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab284680 Zm00024ab284680_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab284800 Zm00024ab284800_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab284800 Zm00024ab284800_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab284910 Zm00024ab284910_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab284910 Zm00024ab284910_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab284910 Zm00024ab284910_P003 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab284960 Zm00024ab284960_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab285050 Zm00024ab285050_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab285050 Zm00024ab285050_P002 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab285100 Zm00024ab285100_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab285100 Zm00024ab285100_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab285100 Zm00024ab285100_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab285100 Zm00024ab285100_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab285280 Zm00024ab285280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab285280 Zm00024ab285280_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab285280 Zm00024ab285280_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab285530 Zm00024ab285530_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab285600 Zm00024ab285600_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab285620 Zm00024ab285620_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab285680 Zm00024ab285680_P001 viridiplantae PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab285710 Zm00024ab285710_P001 conditional PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab285830 Zm00024ab285830_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab286020 Zm00024ab286020_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab286020 Zm00024ab286020_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab286020 Zm00024ab286020_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab286040 Zm00024ab286040_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab286080 Zm00024ab286080_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab286080 Zm00024ab286080_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab286080 Zm00024ab286080_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab286080 Zm00024ab286080_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab286120 Zm00024ab286120_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab286120 Zm00024ab286120_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab286120 Zm00024ab286120_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab286120 Zm00024ab286120_P004 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab286200 Zm00024ab286200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab286200 Zm00024ab286200_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab286200 Zm00024ab286200_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab286250 Zm00024ab286250_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab286250 Zm00024ab286250_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab286260 Zm00024ab286260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab286260 Zm00024ab286260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab286260 Zm00024ab286260_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab286610 Zm00024ab286610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab286610 Zm00024ab286610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab286610 Zm00024ab286610_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab286660 Zm00024ab286660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab286660 Zm00024ab286660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab286660 Zm00024ab286660_P001 conditional PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab286750 Zm00024ab286750_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab286750 Zm00024ab286750_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00024ab286750 Zm00024ab286750_P001 expected THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab286760 Zm00024ab286760_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00024ab286880 Zm00024ab286880_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab286960 Zm00024ab286960_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab287030 Zm00024ab287030_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab287030 Zm00024ab287030_P002 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab287160 Zm00024ab287160_P002 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab287240 Zm00024ab287240_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab287240 Zm00024ab287240_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab287320 Zm00024ab287320_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab287320 Zm00024ab287320_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab287320 Zm00024ab287320_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab287320 Zm00024ab287320_P001 NA PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00024ab287370 Zm00024ab287370_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab287590 Zm00024ab287590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287590 Zm00024ab287590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287590 Zm00024ab287590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab287600 Zm00024ab287600_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab287660 Zm00024ab287660_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab287660 Zm00024ab287660_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab287660 Zm00024ab287660_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab287660 Zm00024ab287660_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab287740 Zm00024ab287740_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab287740 Zm00024ab287740_P002 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab287750 Zm00024ab287750_P001 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00024ab288130 Zm00024ab288130_P001 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00024ab288130 Zm00024ab288130_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00024ab288270 Zm00024ab288270_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00024ab288270 Zm00024ab288270_P002 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab288310 Zm00024ab288310_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab288310 Zm00024ab288310_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab288380 Zm00024ab288380_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab288380 Zm00024ab288380_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab288390 Zm00024ab288390_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab288420 Zm00024ab288420_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab288430 Zm00024ab288430_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab288430 Zm00024ab288430_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab288430 Zm00024ab288430_P001 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab288600 Zm00024ab288600_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab288770 Zm00024ab288770_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab288800 Zm00024ab288800_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab288800 Zm00024ab288800_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab288810 Zm00024ab288810_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab288810 Zm00024ab288810_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab288810 Zm00024ab288810_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab288810 Zm00024ab288810_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab288900 Zm00024ab288900_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab288940 Zm00024ab288940_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab288940 Zm00024ab288940_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab288940 Zm00024ab288940_P001 manual PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab289190 Zm00024ab289190_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab289240 Zm00024ab289240_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab289350 Zm00024ab289350_P001 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab289390 Zm00024ab289390_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab289390 Zm00024ab289390_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab289390 Zm00024ab289390_P001 NA PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab289500 Zm00024ab289500_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab289530 Zm00024ab289530_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00024ab289600 Zm00024ab289600_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00024ab289600 Zm00024ab289600_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00024ab289600 Zm00024ab289600_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00024ab289600 Zm00024ab289600_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289610 Zm00024ab289610_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289610 Zm00024ab289610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289610 Zm00024ab289610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab289620 Zm00024ab289620_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab289710 Zm00024ab289710_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab289710 Zm00024ab289710_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab289720 Zm00024ab289720_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab289720 Zm00024ab289720_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab289720 Zm00024ab289720_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab289730 Zm00024ab289730_P001 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab289730 Zm00024ab289730_P003 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab289730 Zm00024ab289730_P004 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00024ab289740 Zm00024ab289740_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab289830 Zm00024ab289830_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab289830 Zm00024ab289830_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab289830 Zm00024ab289830_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab290150 Zm00024ab290150_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab290170 Zm00024ab290170_P002 conditional PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00024ab290240 Zm00024ab290240_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab290470 Zm00024ab290470_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab290470 Zm00024ab290470_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab290490 Zm00024ab290490_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00024ab290540 Zm00024ab290540_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab290700 Zm00024ab290700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab290700 Zm00024ab290700_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab290780 Zm00024ab290780_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab290810 Zm00024ab290810_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab290920 Zm00024ab290920_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab290920 Zm00024ab290920_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab290920 Zm00024ab290920_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab290940 Zm00024ab290940_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab291080 Zm00024ab291080_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab291170 Zm00024ab291170_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab291220 Zm00024ab291220_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab291220 Zm00024ab291220_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab291220 Zm00024ab291220_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P003 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P004 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P005 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P006 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab291300 Zm00024ab291300_P006 manual PWY-5068 chlorophyll cycle RXN1F-66 EC-2.5.1.62 Zm00024ab291600 Zm00024ab291600_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN1F-66 EC-2.5.1.62 Zm00024ab291600 Zm00024ab291600_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-7663 EC-2.5.1.62 Zm00024ab291600 Zm00024ab291600_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab292270 Zm00024ab292270_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab292750 Zm00024ab292750_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab292750 Zm00024ab292750_P001 conditional HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00024ab292930 Zm00024ab292930_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293090 Zm00024ab293090_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P004 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P005 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P006 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P006 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P007 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P007 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P007 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P008 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P008 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P008 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P009 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P009 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab293100 Zm00024ab293100_P009 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab293140 Zm00024ab293140_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab293140 Zm00024ab293140_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab293140 Zm00024ab293140_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab293170 Zm00024ab293170_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab293170 Zm00024ab293170_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00024ab293200 Zm00024ab293200_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00024ab293200 Zm00024ab293200_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab293260 Zm00024ab293260_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab293270 Zm00024ab293270_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab293270 Zm00024ab293270_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab293270 Zm00024ab293270_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab293280 Zm00024ab293280_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab293280 Zm00024ab293280_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab293280 Zm00024ab293280_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab293400 Zm00024ab293400_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab293400 Zm00024ab293400_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab293400 Zm00024ab293400_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab293430 Zm00024ab293430_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab293470 Zm00024ab293470_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab293580 Zm00024ab293580_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab293610 Zm00024ab293610_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab293840 Zm00024ab293840_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab294430 Zm00024ab294430_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab294430 Zm00024ab294430_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab294430 Zm00024ab294430_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab294680 Zm00024ab294680_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab294680 Zm00024ab294680_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab294680 Zm00024ab294680_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab294680 Zm00024ab294680_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab294680 Zm00024ab294680_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab294680 Zm00024ab294680_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab294740 Zm00024ab294740_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab294740 Zm00024ab294740_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab294940 Zm00024ab294940_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab294940 Zm00024ab294940_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab294940 Zm00024ab294940_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab294940 Zm00024ab294940_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab294940 Zm00024ab294940_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab294940 Zm00024ab294940_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab294940 Zm00024ab294940_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab294940 Zm00024ab294940_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab294940 Zm00024ab294940_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab294940 Zm00024ab294940_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab294940 Zm00024ab294940_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab294940 Zm00024ab294940_P001 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab294990 Zm00024ab294990_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab294990 Zm00024ab294990_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab294990 Zm00024ab294990_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab294990 Zm00024ab294990_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab295040 Zm00024ab295040_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab295040 Zm00024ab295040_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab295040 Zm00024ab295040_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab295040 Zm00024ab295040_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab295080 Zm00024ab295080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab295080 Zm00024ab295080_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab295190 Zm00024ab295190_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab295320 Zm00024ab295320_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab295320 Zm00024ab295320_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab295410 Zm00024ab295410_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab295410 Zm00024ab295410_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab295410 Zm00024ab295410_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00024ab295410 Zm00024ab295410_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab295930 Zm00024ab295930_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab295970 Zm00024ab295970_P001 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00024ab296220 Zm00024ab296220_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab296260 Zm00024ab296260_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab296260 Zm00024ab296260_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab296260 Zm00024ab296260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab296260 Zm00024ab296260_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab296260 Zm00024ab296260_P001 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab296690 Zm00024ab296690_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab296690 Zm00024ab296690_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00024ab296750 Zm00024ab296750_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab296760 Zm00024ab296760_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab296760 Zm00024ab296760_P002 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00024ab296800 Zm00024ab296800_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00024ab296800 Zm00024ab296800_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab297040 Zm00024ab297040_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab297220 Zm00024ab297220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab297220 Zm00024ab297220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab297220 Zm00024ab297220_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab297230 Zm00024ab297230_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab297230 Zm00024ab297230_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab297230 Zm00024ab297230_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00024ab297380 Zm00024ab297380_P002 NA SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00024ab297440 Zm00024ab297440_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00024ab297440 Zm00024ab297440_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab297470 Zm00024ab297470_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab297640 Zm00024ab297640_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab297640 Zm00024ab297640_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab297640 Zm00024ab297640_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab297820 Zm00024ab297820_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab297820 Zm00024ab297820_P001 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab297890 Zm00024ab297890_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00024ab297890 Zm00024ab297890_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab297960 Zm00024ab297960_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab298200 Zm00024ab298200_P001 conditional PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00024ab298260 Zm00024ab298260_P002 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab298490 Zm00024ab298490_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab298530 Zm00024ab298530_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab298580 Zm00024ab298580_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab298580 Zm00024ab298580_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab298590 Zm00024ab298590_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab298590 Zm00024ab298590_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab298590 Zm00024ab298590_P003 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab298770 Zm00024ab298770_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab298770 Zm00024ab298770_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab298770 Zm00024ab298770_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab298950 Zm00024ab298950_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab298960 Zm00024ab298960_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab298960 Zm00024ab298960_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab298960 Zm00024ab298960_P001 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab299050 Zm00024ab299050_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab299050 Zm00024ab299050_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab299090 Zm00024ab299090_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab299210 Zm00024ab299210_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab299430 Zm00024ab299430_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab299430 Zm00024ab299430_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab299440 Zm00024ab299440_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab299470 Zm00024ab299470_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab299470 Zm00024ab299470_P001 excluded PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab299500 Zm00024ab299500_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab299520 Zm00024ab299520_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab299520 Zm00024ab299520_P001 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab299620 Zm00024ab299620_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab299620 Zm00024ab299620_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab299860 Zm00024ab299860_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab299860 Zm00024ab299860_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab299860 Zm00024ab299860_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab299860 Zm00024ab299860_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab299950 Zm00024ab299950_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab299950 Zm00024ab299950_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab299950 Zm00024ab299950_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab300240 Zm00024ab300240_P003 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00024ab300360 Zm00024ab300360_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab300370 Zm00024ab300370_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab300380 Zm00024ab300380_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab300380 Zm00024ab300380_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab300380 Zm00024ab300380_P003 expected PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab300410 Zm00024ab300410_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab300560 Zm00024ab300560_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00024ab300560 Zm00024ab300560_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab300760 Zm00024ab300760_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab300760 Zm00024ab300760_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab300760 Zm00024ab300760_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab300760 Zm00024ab300760_P002 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab300800 Zm00024ab300800_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab300800 Zm00024ab300800_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab300860 Zm00024ab300860_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab300860 Zm00024ab300860_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab300860 Zm00024ab300860_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00024ab301080 Zm00024ab301080_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab301130 Zm00024ab301130_P001 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab301240 Zm00024ab301240_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab301240 Zm00024ab301240_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab301690 Zm00024ab301690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab301690 Zm00024ab301690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab301690 Zm00024ab301690_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab301830 Zm00024ab301830_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab301830 Zm00024ab301830_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab301900 Zm00024ab301900_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab301910 Zm00024ab301910_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab301910 Zm00024ab301910_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab301930 Zm00024ab301930_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab301930 Zm00024ab301930_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab301930 Zm00024ab301930_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab301930 Zm00024ab301930_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab301990 Zm00024ab301990_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab301990 Zm00024ab301990_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab302000 Zm00024ab302000_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab302000 Zm00024ab302000_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab302010 Zm00024ab302010_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab302030 Zm00024ab302030_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab302030 Zm00024ab302030_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab302030 Zm00024ab302030_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab302090 Zm00024ab302090_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab302510 Zm00024ab302510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab302960 Zm00024ab302960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab303100 Zm00024ab303100_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab303120 Zm00024ab303120_P001 viridiplantae PWYQT-4450 aliphatic glucosinolate biosynthesis, side chain elongation cycle RXNQT-4163 EC-2.3.3.17 Zm00024ab303120 Zm00024ab303120_P001 conditional PWY-1186 L-homomethionine biosynthesis RXN-2202 EC-2.3.3.17 Zm00024ab303120 Zm00024ab303120_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab303130 Zm00024ab303130_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab303130 Zm00024ab303130_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab303180 Zm00024ab303180_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab303190 Zm00024ab303190_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab303340 Zm00024ab303340_P001 ubiquitous PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab303350 Zm00024ab303350_P001 excluded PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab303400 Zm00024ab303400_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab303560 Zm00024ab303560_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab303650 Zm00024ab303650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab303650 Zm00024ab303650_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab303790 Zm00024ab303790_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303790 Zm00024ab303790_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303790 Zm00024ab303790_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab303800 Zm00024ab303800_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303800 Zm00024ab303800_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303800 Zm00024ab303800_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303820 Zm00024ab303820_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab303830 Zm00024ab303830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303830 Zm00024ab303830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab303830 Zm00024ab303830_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab303860 Zm00024ab303860_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab303960 Zm00024ab303960_P001 conditional PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab304030 Zm00024ab304030_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P002 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P002 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab304030 Zm00024ab304030_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P003 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P003 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab304030 Zm00024ab304030_P003 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab304030 Zm00024ab304030_P003 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00024ab304030 Zm00024ab304030_P003 expected PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00024ab304030 Zm00024ab304030_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab304050 Zm00024ab304050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab304050 Zm00024ab304050_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab304050 Zm00024ab304050_P003 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab304100 Zm00024ab304100_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab304110 Zm00024ab304110_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00024ab304140 Zm00024ab304140_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab304230 Zm00024ab304230_P001 NA PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab304710 Zm00024ab304710_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00024ab304710 Zm00024ab304710_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00024ab304710 Zm00024ab304710_P001 expected PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab304880 Zm00024ab304880_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab304880 Zm00024ab304880_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab305100 Zm00024ab305100_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab305390 Zm00024ab305390_P001 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab305430 Zm00024ab305430_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab305520 Zm00024ab305520_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab305590 Zm00024ab305590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab305590 Zm00024ab305590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab305590 Zm00024ab305590_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab305600 Zm00024ab305600_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00024ab305600 Zm00024ab305600_P002 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab305710 Zm00024ab305710_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab306090 Zm00024ab306090_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab306090 Zm00024ab306090_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab306090 Zm00024ab306090_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab306100 Zm00024ab306100_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab306100 Zm00024ab306100_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab306100 Zm00024ab306100_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab306120 Zm00024ab306120_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab306120 Zm00024ab306120_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab306120 Zm00024ab306120_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab306140 Zm00024ab306140_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab306140 Zm00024ab306140_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab306140 Zm00024ab306140_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab306150 Zm00024ab306150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab306150 Zm00024ab306150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab306150 Zm00024ab306150_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab306180 Zm00024ab306180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab306180 Zm00024ab306180_P002 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab306250 Zm00024ab306250_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab306840 Zm00024ab306840_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab306840 Zm00024ab306840_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00024ab306840 Zm00024ab306840_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00024ab306990 Zm00024ab306990_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00024ab306990 Zm00024ab306990_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab307070 Zm00024ab307070_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab307070 Zm00024ab307070_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab307070 Zm00024ab307070_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab307070 Zm00024ab307070_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab307150 Zm00024ab307150_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab307150 Zm00024ab307150_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab307250 Zm00024ab307250_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab307500 Zm00024ab307500_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab307750 Zm00024ab307750_P001 expected VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00024ab307760 Zm00024ab307760_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab307810 Zm00024ab307810_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab307810 Zm00024ab307810_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00024ab307810 Zm00024ab307810_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00024ab307810 Zm00024ab307810_P001 expected PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab307950 Zm00024ab307950_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab307960 Zm00024ab307960_P001 ubiquitous GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00024ab308090 Zm00024ab308090_P001 conditional GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00024ab308090 Zm00024ab308090_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00024ab308270 Zm00024ab308270_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab308390 Zm00024ab308390_P001 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab308530 Zm00024ab308530_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab308620 Zm00024ab308620_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab308700 Zm00024ab308700_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab308700 Zm00024ab308700_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab308700 Zm00024ab308700_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab308700 Zm00024ab308700_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00024ab308700 Zm00024ab308700_P005 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab308710 Zm00024ab308710_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab308770 Zm00024ab308770_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab309000 Zm00024ab309000_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab309000 Zm00024ab309000_P002 NA PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab309210 Zm00024ab309210_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab309210 Zm00024ab309210_P002 expected PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab309320 Zm00024ab309320_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00024ab309320 Zm00024ab309320_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab309480 Zm00024ab309480_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309580 Zm00024ab309580_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309590 Zm00024ab309590_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309600 Zm00024ab309600_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309620 Zm00024ab309620_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309650 Zm00024ab309650_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309650 Zm00024ab309650_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00024ab309690 Zm00024ab309690_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab309700 Zm00024ab309700_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab309730 Zm00024ab309730_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab309730 Zm00024ab309730_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309860 Zm00024ab309860_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309860 Zm00024ab309860_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309860 Zm00024ab309860_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309880 Zm00024ab309880_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309880 Zm00024ab309880_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab309880 Zm00024ab309880_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab310190 Zm00024ab310190_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab310210 Zm00024ab310210_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab310210 Zm00024ab310210_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab310620 Zm00024ab310620_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab310620 Zm00024ab310620_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00024ab310620 Zm00024ab310620_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab310700 Zm00024ab310700_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00024ab310700 Zm00024ab310700_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab310770 Zm00024ab310770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab310770 Zm00024ab310770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab310770 Zm00024ab310770_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab310780 Zm00024ab310780_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab310880 Zm00024ab310880_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab310970 Zm00024ab310970_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab310980 Zm00024ab310980_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab311080 Zm00024ab311080_P001 viridiplantae PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab311260 Zm00024ab311260_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab311260 Zm00024ab311260_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab311260 Zm00024ab311260_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab311380 Zm00024ab311380_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab311540 Zm00024ab311540_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab311540 Zm00024ab311540_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab311540 Zm00024ab311540_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab311540 Zm00024ab311540_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab311550 Zm00024ab311550_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab311550 Zm00024ab311550_P002 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab311550 Zm00024ab311550_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab311630 Zm00024ab311630_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab311670 Zm00024ab311670_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab311670 Zm00024ab311670_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab311730 Zm00024ab311730_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab311730 Zm00024ab311730_P002 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00024ab311840 Zm00024ab311840_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab311940 Zm00024ab311940_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab312060 Zm00024ab312060_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab312090 Zm00024ab312090_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab312100 Zm00024ab312100_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab312100 Zm00024ab312100_P001 ubiquitous PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00024ab312150 Zm00024ab312150_P001 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00024ab312150 Zm00024ab312150_P002 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab312310 Zm00024ab312310_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab312310 Zm00024ab312310_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab312310 Zm00024ab312310_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab312310 Zm00024ab312310_P004 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab312490 Zm00024ab312490_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab312490 Zm00024ab312490_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab312490 Zm00024ab312490_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab312500 Zm00024ab312500_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab312500 Zm00024ab312500_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab312500 Zm00024ab312500_P002 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab312500 Zm00024ab312500_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab312500 Zm00024ab312500_P002 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab312640 Zm00024ab312640_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab312780 Zm00024ab312780_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab312780 Zm00024ab312780_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab312780 Zm00024ab312780_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab312780 Zm00024ab312780_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab312860 Zm00024ab312860_P001 viridiplantae PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00024ab312930 Zm00024ab312930_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00024ab313000 Zm00024ab313000_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00024ab313000 Zm00024ab313000_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00024ab313000 Zm00024ab313000_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00024ab313000 Zm00024ab313000_P004 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab313140 Zm00024ab313140_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab313140 Zm00024ab313140_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab313140 Zm00024ab313140_P003 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab313180 Zm00024ab313180_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab313180 Zm00024ab313180_P001 excluded PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab313370 Zm00024ab313370_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab313370 Zm00024ab313370_P002 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab313370 Zm00024ab313370_P003 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab313370 Zm00024ab313370_P004 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00024ab313370 Zm00024ab313370_P005 NA PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00024ab313620 Zm00024ab313620_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab313710 Zm00024ab313710_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab313810 Zm00024ab313810_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P005 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P006 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab313820 Zm00024ab313820_P006 conditional PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00024ab313830 Zm00024ab313830_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00024ab313830 Zm00024ab313830_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab313940 Zm00024ab313940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab313940 Zm00024ab313940_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab314190 Zm00024ab314190_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P004 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P005 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab314420 Zm00024ab314420_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab314470 Zm00024ab314470_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab314680 Zm00024ab314680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab314680 Zm00024ab314680_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab314680 Zm00024ab314680_P003 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00024ab314820 Zm00024ab314820_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00024ab314820 Zm00024ab314820_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00024ab314820 Zm00024ab314820_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00024ab314820 Zm00024ab314820_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P002 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab314840 Zm00024ab314840_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab315230 Zm00024ab315230_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00024ab315250 Zm00024ab315250_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab315250 Zm00024ab315250_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00024ab315250 Zm00024ab315250_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab315340 Zm00024ab315340_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab315340 Zm00024ab315340_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab315340 Zm00024ab315340_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab315340 Zm00024ab315340_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab315340 Zm00024ab315340_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab315340 Zm00024ab315340_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00024ab315400 Zm00024ab315400_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab315460 Zm00024ab315460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab315500 Zm00024ab315500_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab315510 Zm00024ab315510_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab315720 Zm00024ab315720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab315720 Zm00024ab315720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab315720 Zm00024ab315720_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab315730 Zm00024ab315730_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab315760 Zm00024ab315760_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab315760 Zm00024ab315760_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab315760 Zm00024ab315760_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab315760 Zm00024ab315760_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab315760 Zm00024ab315760_P005 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab315770 Zm00024ab315770_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab315970 Zm00024ab315970_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab315970 Zm00024ab315970_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab315970 Zm00024ab315970_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab315970 Zm00024ab315970_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab315990 Zm00024ab315990_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab316080 Zm00024ab316080_P001 ubiquitous PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab316120 Zm00024ab316120_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab316120 Zm00024ab316120_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00024ab316120 Zm00024ab316120_P001 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab316180 Zm00024ab316180_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab316180 Zm00024ab316180_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab316180 Zm00024ab316180_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab316180 Zm00024ab316180_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab316280 Zm00024ab316280_P001 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab316320 Zm00024ab316320_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab316580 Zm00024ab316580_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab316580 Zm00024ab316580_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00024ab316640 Zm00024ab316640_P001 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab316760 Zm00024ab316760_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00024ab316760 Zm00024ab316760_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab317140 Zm00024ab317140_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab317140 Zm00024ab317140_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab317140 Zm00024ab317140_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P001 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P002 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00024ab317200 Zm00024ab317200_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab317460 Zm00024ab317460_P001 conditional FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADPH-RXN EC-1.3.1.39 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab317460 Zm00024ab317460_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00024ab317460 Zm00024ab317460_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00024ab317500 Zm00024ab317500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab317520 Zm00024ab317520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab317520 Zm00024ab317520_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab317650 Zm00024ab317650_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab317890 Zm00024ab317890_P001 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab318130 Zm00024ab318130_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab318130 Zm00024ab318130_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00024ab318130 Zm00024ab318130_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab318160 Zm00024ab318160_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab318160 Zm00024ab318160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab318280 Zm00024ab318280_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab318280 Zm00024ab318280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab318300 Zm00024ab318300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab318300 Zm00024ab318300_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab318380 Zm00024ab318380_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00024ab318380 Zm00024ab318380_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00024ab318380 Zm00024ab318380_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab318520 Zm00024ab318520_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab318630 Zm00024ab318630_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab318630 Zm00024ab318630_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab318630 Zm00024ab318630_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab318630 Zm00024ab318630_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab318630 Zm00024ab318630_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab318630 Zm00024ab318630_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab318630 Zm00024ab318630_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab318630 Zm00024ab318630_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab318630 Zm00024ab318630_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab318630 Zm00024ab318630_P005 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab318650 Zm00024ab318650_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab318660 Zm00024ab318660_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab318670 Zm00024ab318670_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab318670 Zm00024ab318670_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab318830 Zm00024ab318830_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab318850 Zm00024ab318850_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab318850 Zm00024ab318850_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab318860 Zm00024ab318860_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab318860 Zm00024ab318860_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab318950 Zm00024ab318950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab318950 Zm00024ab318950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab318950 Zm00024ab318950_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab318980 Zm00024ab318980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab319100 Zm00024ab319100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab319210 Zm00024ab319210_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab319550 Zm00024ab319550_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab319550 Zm00024ab319550_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab319550 Zm00024ab319550_P001 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab319950 Zm00024ab319950_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab319950 Zm00024ab319950_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab319950 Zm00024ab319950_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab319950 Zm00024ab319950_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab319980 Zm00024ab319980_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00024ab320030 Zm00024ab320030_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320110 Zm00024ab320110_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320110 Zm00024ab320110_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320110 Zm00024ab320110_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320110 Zm00024ab320110_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320130 Zm00024ab320130_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320130 Zm00024ab320130_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320150 Zm00024ab320150_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab320150 Zm00024ab320150_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab320190 Zm00024ab320190_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab320310 Zm00024ab320310_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab320310 Zm00024ab320310_P002 conditional PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab320480 Zm00024ab320480_P001 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab320540 Zm00024ab320540_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab320620 Zm00024ab320620_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab320620 Zm00024ab320620_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00024ab320620 Zm00024ab320620_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab320620 Zm00024ab320620_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00024ab320620 Zm00024ab320620_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00024ab320620 Zm00024ab320620_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P002 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P003 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P004 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P004 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P005 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab320710 Zm00024ab320710_P005 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab321090 Zm00024ab321090_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab321160 Zm00024ab321160_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab321160 Zm00024ab321160_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab321160 Zm00024ab321160_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab321160 Zm00024ab321160_P002 conditional PWY-3841 folate transformations II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00024ab321310 Zm00024ab321310_P001 viridiplantae PWY-2161 folate polyglutamylation FORMATETHFLIG-RXN EC-6.3.4.3 Zm00024ab321310 Zm00024ab321310_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00024ab321310 Zm00024ab321310_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate FORMATETHFLIG-RXN EC-6.3.4.3 Zm00024ab321310 Zm00024ab321310_P001 excluded PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab321340 Zm00024ab321340_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab321450 Zm00024ab321450_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab321550 Zm00024ab321550_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab321550 Zm00024ab321550_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321660 Zm00024ab321660_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321660 Zm00024ab321660_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321660 Zm00024ab321660_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321890 Zm00024ab321890_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321890 Zm00024ab321890_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321890 Zm00024ab321890_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321920 Zm00024ab321920_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321920 Zm00024ab321920_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321920 Zm00024ab321920_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321930 Zm00024ab321930_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321950 Zm00024ab321950_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321950 Zm00024ab321950_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321950 Zm00024ab321950_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321970 Zm00024ab321970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321970 Zm00024ab321970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321970 Zm00024ab321970_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab321980 Zm00024ab321980_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab321980 Zm00024ab321980_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab321980 Zm00024ab321980_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab322000 Zm00024ab322000_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab322000 Zm00024ab322000_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab322000 Zm00024ab322000_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab322170 Zm00024ab322170_P003 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P002 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00024ab322240 Zm00024ab322240_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab322310 Zm00024ab322310_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab322310 Zm00024ab322310_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab322310 Zm00024ab322310_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab322490 Zm00024ab322490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab322490 Zm00024ab322490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab322490 Zm00024ab322490_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00024ab322500 Zm00024ab322500_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00024ab322510 Zm00024ab322510_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00024ab322510 Zm00024ab322510_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab322570 Zm00024ab322570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab322570 Zm00024ab322570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab322570 Zm00024ab322570_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab322690 Zm00024ab322690_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab322690 Zm00024ab322690_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab322730 Zm00024ab322730_P004 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab322900 Zm00024ab322900_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab322900 Zm00024ab322900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab323040 Zm00024ab323040_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab323090 Zm00024ab323090_P001 conditional HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00024ab323290 Zm00024ab323290_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00024ab323290 Zm00024ab323290_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323720 Zm00024ab323720_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323720 Zm00024ab323720_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323750 Zm00024ab323750_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323770 Zm00024ab323770_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323770 Zm00024ab323770_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab323770 Zm00024ab323770_P003 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab323780 Zm00024ab323780_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab323810 Zm00024ab323810_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab323880 Zm00024ab323880_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00024ab324190 Zm00024ab324190_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00024ab324190 Zm00024ab324190_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab324300 Zm00024ab324300_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab324420 Zm00024ab324420_P005 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab324450 Zm00024ab324450_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab324560 Zm00024ab324560_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab324560 Zm00024ab324560_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab324690 Zm00024ab324690_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab324720 Zm00024ab324720_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab324910 Zm00024ab324910_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab324910 Zm00024ab324910_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab325000 Zm00024ab325000_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab325000 Zm00024ab325000_P001 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab325020 Zm00024ab325020_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab325020 Zm00024ab325020_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab325020 Zm00024ab325020_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab325020 Zm00024ab325020_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab325020 Zm00024ab325020_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab325020 Zm00024ab325020_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab325020 Zm00024ab325020_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab325040 Zm00024ab325040_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab325040 Zm00024ab325040_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab325040 Zm00024ab325040_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab325040 Zm00024ab325040_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab325040 Zm00024ab325040_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab325120 Zm00024ab325120_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab325200 Zm00024ab325200_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab325270 Zm00024ab325270_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab325270 Zm00024ab325270_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab325270 Zm00024ab325270_P001 NA PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab325390 Zm00024ab325390_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab325390 Zm00024ab325390_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00024ab325390 Zm00024ab325390_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab325500 Zm00024ab325500_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab325500 Zm00024ab325500_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab325500 Zm00024ab325500_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab325510 Zm00024ab325510_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab325710 Zm00024ab325710_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab325710 Zm00024ab325710_P001 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00024ab325840 Zm00024ab325840_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab326060 Zm00024ab326060_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab326120 Zm00024ab326120_P001 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab326250 Zm00024ab326250_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab326250 Zm00024ab326250_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab326250 Zm00024ab326250_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab326250 Zm00024ab326250_P004 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab326250 Zm00024ab326250_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab326400 Zm00024ab326400_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab326490 Zm00024ab326490_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab326490 Zm00024ab326490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00024ab326630 Zm00024ab326630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00024ab326630 Zm00024ab326630_P001 conditional PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00024ab326640 Zm00024ab326640_P001 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00024ab326640 Zm00024ab326640_P001 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00024ab326640 Zm00024ab326640_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00024ab326640 Zm00024ab326640_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab326710 Zm00024ab326710_P001 NA PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00024ab326800 Zm00024ab326800_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab326910 Zm00024ab326910_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab326910 Zm00024ab326910_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab326920 Zm00024ab326920_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab326920 Zm00024ab326920_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab327240 Zm00024ab327240_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab327240 Zm00024ab327240_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab327260 Zm00024ab327260_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00024ab327290 Zm00024ab327290_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00024ab327350 Zm00024ab327350_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00024ab327350 Zm00024ab327350_P001 excluded PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab327830 Zm00024ab327830_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab327830 Zm00024ab327830_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab327860 Zm00024ab327860_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab327860 Zm00024ab327860_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab327860 Zm00024ab327860_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab327890 Zm00024ab327890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab327890 Zm00024ab327890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab327890 Zm00024ab327890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab327900 Zm00024ab327900_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab327900 Zm00024ab327900_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab327900 Zm00024ab327900_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab328260 Zm00024ab328260_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab328260 Zm00024ab328260_P002 viridiplantae PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00024ab328280 Zm00024ab328280_P001 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00024ab328280 Zm00024ab328280_P001 expected PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00024ab328280 Zm00024ab328280_P002 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00024ab328280 Zm00024ab328280_P002 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab328550 Zm00024ab328550_P002 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab328600 Zm00024ab328600_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab328630 Zm00024ab328630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab328630 Zm00024ab328630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab328630 Zm00024ab328630_P001 conditional GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P001 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P002 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00024ab328750 Zm00024ab328750_P003 NA PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00024ab328810 Zm00024ab328810_P001 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00024ab328810 Zm00024ab328810_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab329000 Zm00024ab329000_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab329000 Zm00024ab329000_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab329000 Zm00024ab329000_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab329000 Zm00024ab329000_P001 NA SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00024ab329210 Zm00024ab329210_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00024ab329210 Zm00024ab329210_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00024ab329210 Zm00024ab329210_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00024ab329210 Zm00024ab329210_P002 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab329380 Zm00024ab329380_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab329380 Zm00024ab329380_P001 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab329380 Zm00024ab329380_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab329380 Zm00024ab329380_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab329380 Zm00024ab329380_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab329380 Zm00024ab329380_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P001 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00024ab329550 Zm00024ab329550_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab329780 Zm00024ab329780_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab329780 Zm00024ab329780_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00024ab329970 Zm00024ab329970_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00024ab329970 Zm00024ab329970_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00024ab329970 Zm00024ab329970_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00024ab329970 Zm00024ab329970_P004 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab330070 Zm00024ab330070_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab330070 Zm00024ab330070_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab330070 Zm00024ab330070_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab330070 Zm00024ab330070_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab330370 Zm00024ab330370_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab330370 Zm00024ab330370_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab330480 Zm00024ab330480_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab330480 Zm00024ab330480_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab330480 Zm00024ab330480_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab330480 Zm00024ab330480_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab330480 Zm00024ab330480_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab330670 Zm00024ab330670_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab330680 Zm00024ab330680_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab330690 Zm00024ab330690_P001 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab331040 Zm00024ab331040_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab331190 Zm00024ab331190_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab331190 Zm00024ab331190_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab331440 Zm00024ab331440_P001 expected PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab331930 Zm00024ab331930_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab332070 Zm00024ab332070_P001 expected PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab332200 Zm00024ab332200_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab332200 Zm00024ab332200_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab332200 Zm00024ab332200_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00024ab332200 Zm00024ab332200_P002 NA PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab332310 Zm00024ab332310_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab332310 Zm00024ab332310_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab332310 Zm00024ab332310_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00024ab332310 Zm00024ab332310_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab332310 Zm00024ab332310_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab332310 Zm00024ab332310_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab332310 Zm00024ab332310_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab332310 Zm00024ab332310_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab332620 Zm00024ab332620_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab332620 Zm00024ab332620_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab332710 Zm00024ab332710_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab332710 Zm00024ab332710_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab332710 Zm00024ab332710_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab332900 Zm00024ab332900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab332900 Zm00024ab332900_P002 viridiplantae PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00024ab333190 Zm00024ab333190_P001 NA PWY-641 proanthocyanidins biosynthesis from flavanols RXN-10693 EC-1.3.1.77 Zm00024ab333480 Zm00024ab333480_P001 conditional PWY-6035 2,3-cis-flavanols biosynthesis RXN-9725 EC-1.3.1.77 Zm00024ab333480 Zm00024ab333480_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab333530 Zm00024ab333530_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab333610 Zm00024ab333610_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab333610 Zm00024ab333610_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00024ab333610 Zm00024ab333610_P003 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00024ab333740 Zm00024ab333740_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab333760 Zm00024ab333760_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab333840 Zm00024ab333840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab333840 Zm00024ab333840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab333840 Zm00024ab333840_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab334020 Zm00024ab334020_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab334020 Zm00024ab334020_P003 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab334200 Zm00024ab334200_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab334200 Zm00024ab334200_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab334200 Zm00024ab334200_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab334200 Zm00024ab334200_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab334270 Zm00024ab334270_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab334270 Zm00024ab334270_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab334270 Zm00024ab334270_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab334270 Zm00024ab334270_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab334290 Zm00024ab334290_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab334290 Zm00024ab334290_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab334340 Zm00024ab334340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab334350 Zm00024ab334350_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab334570 Zm00024ab334570_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab334580 Zm00024ab334580_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab334690 Zm00024ab334690_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab334700 Zm00024ab334700_P001 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00024ab334860 Zm00024ab334860_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00024ab334860 Zm00024ab334860_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00024ab334910 Zm00024ab334910_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab334960 Zm00024ab334960_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab335020 Zm00024ab335020_P001 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab335030 Zm00024ab335030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab335030 Zm00024ab335030_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab335030 Zm00024ab335030_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab335030 Zm00024ab335030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab335030 Zm00024ab335030_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab335300 Zm00024ab335300_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab335300 Zm00024ab335300_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab335300 Zm00024ab335300_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335600 Zm00024ab335600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335600 Zm00024ab335600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335600 Zm00024ab335600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335610 Zm00024ab335610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335610 Zm00024ab335610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335610 Zm00024ab335610_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335620 Zm00024ab335620_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335620 Zm00024ab335620_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335620 Zm00024ab335620_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335630 Zm00024ab335630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335630 Zm00024ab335630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335630 Zm00024ab335630_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335650 Zm00024ab335650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335650 Zm00024ab335650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335650 Zm00024ab335650_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335680 Zm00024ab335680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335680 Zm00024ab335680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335680 Zm00024ab335680_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab335690 Zm00024ab335690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335690 Zm00024ab335690_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab335690 Zm00024ab335690_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab335700 Zm00024ab335700_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab335700 Zm00024ab335700_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab335700 Zm00024ab335700_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab335700 Zm00024ab335700_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab335880 Zm00024ab335880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab335880 Zm00024ab335880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab335880 Zm00024ab335880_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab335930 Zm00024ab335930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab335930 Zm00024ab335930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab335930 Zm00024ab335930_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab335950 Zm00024ab335950_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab335950 Zm00024ab335950_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab335950 Zm00024ab335950_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab335990 Zm00024ab335990_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab335990 Zm00024ab335990_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab335990 Zm00024ab335990_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab336010 Zm00024ab336010_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab336010 Zm00024ab336010_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab336010 Zm00024ab336010_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab336020 Zm00024ab336020_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab336020 Zm00024ab336020_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab336020 Zm00024ab336020_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab336200 Zm00024ab336200_P001 expected PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab336310 Zm00024ab336310_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab336360 Zm00024ab336360_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab336410 Zm00024ab336410_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab336410 Zm00024ab336410_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab336410 Zm00024ab336410_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab336520 Zm00024ab336520_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab336520 Zm00024ab336520_P002 viridiplantae PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P001 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P001 NA PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P002 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00024ab336640 Zm00024ab336640_P002 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab336670 Zm00024ab336670_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab336670 Zm00024ab336670_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab336690 Zm00024ab336690_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00024ab336800 Zm00024ab336800_P001 viridiplantae PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00024ab336900 Zm00024ab336900_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00024ab336900 Zm00024ab336900_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab336930 Zm00024ab336930_P006 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab336960 Zm00024ab336960_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab336960 Zm00024ab336960_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab337060 Zm00024ab337060_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab337060 Zm00024ab337060_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab337060 Zm00024ab337060_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab337060 Zm00024ab337060_P003 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab337090 Zm00024ab337090_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab337090 Zm00024ab337090_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab337090 Zm00024ab337090_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab337090 Zm00024ab337090_P004 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab337090 Zm00024ab337090_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab337180 Zm00024ab337180_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab337340 Zm00024ab337340_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab337400 Zm00024ab337400_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab337410 Zm00024ab337410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337410 Zm00024ab337410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337410 Zm00024ab337410_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab337430 Zm00024ab337430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337430 Zm00024ab337430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337430 Zm00024ab337430_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab337440 Zm00024ab337440_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337440 Zm00024ab337440_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337440 Zm00024ab337440_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab337450 Zm00024ab337450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337450 Zm00024ab337450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab337450 Zm00024ab337450_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab337460 Zm00024ab337460_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00024ab337530 Zm00024ab337530_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab337690 Zm00024ab337690_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab337690 Zm00024ab337690_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab337700 Zm00024ab337700_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab337700 Zm00024ab337700_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab337740 Zm00024ab337740_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab337740 Zm00024ab337740_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab337830 Zm00024ab337830_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00024ab338080 Zm00024ab338080_P001 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P001 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00024ab338150 Zm00024ab338150_P002 excluded PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab338230 Zm00024ab338230_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab338260 Zm00024ab338260_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab338260 Zm00024ab338260_P001 ubiquitous PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00024ab338420 Zm00024ab338420_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab338460 Zm00024ab338460_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab338460 Zm00024ab338460_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab338580 Zm00024ab338580_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab338580 Zm00024ab338580_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab338630 Zm00024ab338630_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00024ab338630 Zm00024ab338630_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab338640 Zm00024ab338640_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab338640 Zm00024ab338640_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab338640 Zm00024ab338640_P001 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00024ab338930 Zm00024ab338930_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab338940 Zm00024ab338940_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab339190 Zm00024ab339190_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab339190 Zm00024ab339190_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab339190 Zm00024ab339190_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab339210 Zm00024ab339210_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab339210 Zm00024ab339210_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab339210 Zm00024ab339210_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab339210 Zm00024ab339210_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab339210 Zm00024ab339210_P001 ubiquitous PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00024ab339300 Zm00024ab339300_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab339400 Zm00024ab339400_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab339420 Zm00024ab339420_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00024ab339420 Zm00024ab339420_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab339510 Zm00024ab339510_P001 ubiquitous PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab339520 Zm00024ab339520_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab339520 Zm00024ab339520_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab339520 Zm00024ab339520_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab339520 Zm00024ab339520_P001 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab339770 Zm00024ab339770_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab339770 Zm00024ab339770_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab339770 Zm00024ab339770_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTCYCLOHYD-RXN EC-3.5.4.19 Zm00024ab339800 Zm00024ab339800_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTPRATPHYD-RXN EC-3.6.1.31 Zm00024ab339800 Zm00024ab339800_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab339830 Zm00024ab339830_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab339870 Zm00024ab339870_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab339870 Zm00024ab339870_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab339900 Zm00024ab339900_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab339900 Zm00024ab339900_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab339900 Zm00024ab339900_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab339900 Zm00024ab339900_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab339990 Zm00024ab339990_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab339990 Zm00024ab339990_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab340000 Zm00024ab340000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340000 Zm00024ab340000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340000 Zm00024ab340000_P001 conditional LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00024ab340030 Zm00024ab340030_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab340160 Zm00024ab340160_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab340300 Zm00024ab340300_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab340320 Zm00024ab340320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340320 Zm00024ab340320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340320 Zm00024ab340320_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab340330 Zm00024ab340330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340330 Zm00024ab340330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab340330 Zm00024ab340330_P001 conditional HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00024ab340400 Zm00024ab340400_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00024ab340400 Zm00024ab340400_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00024ab340400 Zm00024ab340400_P002 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P002 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00024ab340400 Zm00024ab340400_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00024ab340400 Zm00024ab340400_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab340430 Zm00024ab340430_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab340480 Zm00024ab340480_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00024ab340480 Zm00024ab340480_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab340620 Zm00024ab340620_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab340630 Zm00024ab340630_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab340860 Zm00024ab340860_P001 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab340930 Zm00024ab340930_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab340960 Zm00024ab340960_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab340960 Zm00024ab340960_P002 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab340980 Zm00024ab340980_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab340980 Zm00024ab340980_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab341280 Zm00024ab341280_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab341280 Zm00024ab341280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab341280 Zm00024ab341280_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab341300 Zm00024ab341300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab341300 Zm00024ab341300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab341300 Zm00024ab341300_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab341490 Zm00024ab341490_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab341490 Zm00024ab341490_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab341500 Zm00024ab341500_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00024ab341500 Zm00024ab341500_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab341590 Zm00024ab341590_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab341770 Zm00024ab341770_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab341780 Zm00024ab341780_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab341780 Zm00024ab341780_P001 conditional PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00024ab342460 Zm00024ab342460_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00024ab342460 Zm00024ab342460_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab342570 Zm00024ab342570_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab342670 Zm00024ab342670_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab342670 Zm00024ab342670_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab342820 Zm00024ab342820_P001 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab342930 Zm00024ab342930_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00024ab342970 Zm00024ab342970_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00024ab342970 Zm00024ab342970_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00024ab342970 Zm00024ab342970_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00024ab342980 Zm00024ab342980_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00024ab342980 Zm00024ab342980_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00024ab342980 Zm00024ab342980_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00024ab342990 Zm00024ab342990_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00024ab342990 Zm00024ab342990_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00024ab342990 Zm00024ab342990_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab343020 Zm00024ab343020_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab343020 Zm00024ab343020_P002 viridiplantae PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00024ab343030 Zm00024ab343030_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00024ab343030 Zm00024ab343030_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab343030 Zm00024ab343030_P002 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P002 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00024ab343030 Zm00024ab343030_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab343080 Zm00024ab343080_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab343080 Zm00024ab343080_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab343080 Zm00024ab343080_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab343090 Zm00024ab343090_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab343090 Zm00024ab343090_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab343090 Zm00024ab343090_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab343300 Zm00024ab343300_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab343300 Zm00024ab343300_P001 expected PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00024ab343440 Zm00024ab343440_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab343480 Zm00024ab343480_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab343480 Zm00024ab343480_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab343480 Zm00024ab343480_P001 NA PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab343550 Zm00024ab343550_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343670 Zm00024ab343670_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab343850 Zm00024ab343850_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab343950 Zm00024ab343950_P001 viridiplantae PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00024ab343960 Zm00024ab343960_P001 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00024ab343990 Zm00024ab343990_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00024ab343990 Zm00024ab343990_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00024ab343990 Zm00024ab343990_P003 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P004 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P004 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P004 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P004 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00024ab343990 Zm00024ab343990_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00024ab343990 Zm00024ab343990_P004 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab344160 Zm00024ab344160_P001 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab344520 Zm00024ab344520_P002 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00024ab344600 Zm00024ab344600_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00024ab344600 Zm00024ab344600_P002 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00024ab344600 Zm00024ab344600_P003 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00024ab344600 Zm00024ab344600_P003 ubiquitous PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00024ab344730 Zm00024ab344730_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00024ab344730 Zm00024ab344730_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00024ab344730 Zm00024ab344730_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00024ab344730 Zm00024ab344730_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00024ab344730 Zm00024ab344730_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00024ab344730 Zm00024ab344730_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab344790 Zm00024ab344790_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab344910 Zm00024ab344910_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab344910 Zm00024ab344910_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab344910 Zm00024ab344910_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab344910 Zm00024ab344910_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab344910 Zm00024ab344910_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab345280 Zm00024ab345280_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab345390 Zm00024ab345390_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab345390 Zm00024ab345390_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab345390 Zm00024ab345390_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab345430 Zm00024ab345430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab345430 Zm00024ab345430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab345430 Zm00024ab345430_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00024ab345480 Zm00024ab345480_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00024ab345480 Zm00024ab345480_P002 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab345600 Zm00024ab345600_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345770 Zm00024ab345770_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345780 Zm00024ab345780_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345780 Zm00024ab345780_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345780 Zm00024ab345780_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345800 Zm00024ab345800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345800 Zm00024ab345800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345800 Zm00024ab345800_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345830 Zm00024ab345830_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345830 Zm00024ab345830_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345830 Zm00024ab345830_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345840 Zm00024ab345840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345840 Zm00024ab345840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345840 Zm00024ab345840_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab345850 Zm00024ab345850_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab345900 Zm00024ab345900_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab345900 Zm00024ab345900_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab345900 Zm00024ab345900_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab345930 Zm00024ab345930_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab346090 Zm00024ab346090_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab346090 Zm00024ab346090_P001 conditional PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00024ab346240 Zm00024ab346240_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00024ab346240 Zm00024ab346240_P002 viridiplantae PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P002 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00024ab346460 Zm00024ab346460_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab346480 Zm00024ab346480_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab346480 Zm00024ab346480_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab346480 Zm00024ab346480_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab346520 Zm00024ab346520_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab346520 Zm00024ab346520_P002 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab346650 Zm00024ab346650_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab346650 Zm00024ab346650_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab346680 Zm00024ab346680_P001 viridiplantae PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00024ab346690 Zm00024ab346690_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab346880 Zm00024ab346880_P001 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab346930 Zm00024ab346930_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab346930 Zm00024ab346930_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab347150 Zm00024ab347150_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab347150 Zm00024ab347150_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab347180 Zm00024ab347180_P001 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab347250 Zm00024ab347250_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab347250 Zm00024ab347250_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab347250 Zm00024ab347250_P003 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347420 Zm00024ab347420_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab347430 Zm00024ab347430_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab347490 Zm00024ab347490_P001 expected PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab347540 Zm00024ab347540_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab347540 Zm00024ab347540_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab347600 Zm00024ab347600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab347600 Zm00024ab347600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab347600 Zm00024ab347600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab347610 Zm00024ab347610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab347610 Zm00024ab347610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab347610 Zm00024ab347610_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab347620 Zm00024ab347620_P004 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab347760 Zm00024ab347760_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab347760 Zm00024ab347760_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab347760 Zm00024ab347760_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab347760 Zm00024ab347760_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab347870 Zm00024ab347870_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab347870 Zm00024ab347870_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab347910 Zm00024ab347910_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab347910 Zm00024ab347910_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab348000 Zm00024ab348000_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab348100 Zm00024ab348100_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab348100 Zm00024ab348100_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab348100 Zm00024ab348100_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab348100 Zm00024ab348100_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00024ab348490 Zm00024ab348490_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00024ab348490 Zm00024ab348490_P001 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab348500 Zm00024ab348500_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab348500 Zm00024ab348500_P001 conditional PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00024ab348520 Zm00024ab348520_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00024ab348520 Zm00024ab348520_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab348670 Zm00024ab348670_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab348670 Zm00024ab348670_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab348670 Zm00024ab348670_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab348670 Zm00024ab348670_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab348760 Zm00024ab348760_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab348770 Zm00024ab348770_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab349170 Zm00024ab349170_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab349170 Zm00024ab349170_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab349170 Zm00024ab349170_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab349280 Zm00024ab349280_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00024ab349350 Zm00024ab349350_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00024ab349350 Zm00024ab349350_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab349350 Zm00024ab349350_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab349370 Zm00024ab349370_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab349370 Zm00024ab349370_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab349370 Zm00024ab349370_P003 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab349580 Zm00024ab349580_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00024ab349580 Zm00024ab349580_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab349630 Zm00024ab349630_P005 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab349730 Zm00024ab349730_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab349730 Zm00024ab349730_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab349730 Zm00024ab349730_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00024ab349920 Zm00024ab349920_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab349960 Zm00024ab349960_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab349970 Zm00024ab349970_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab350200 Zm00024ab350200_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab350200 Zm00024ab350200_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab350200 Zm00024ab350200_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab350200 Zm00024ab350200_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00024ab350460 Zm00024ab350460_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab350560 Zm00024ab350560_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab350560 Zm00024ab350560_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab350560 Zm00024ab350560_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab350560 Zm00024ab350560_P004 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00024ab350680 Zm00024ab350680_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00024ab350680 Zm00024ab350680_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00024ab350680 Zm00024ab350680_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00024ab350680 Zm00024ab350680_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab351060 Zm00024ab351060_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab351060 Zm00024ab351060_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab351060 Zm00024ab351060_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab351270 Zm00024ab351270_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab351310 Zm00024ab351310_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab351310 Zm00024ab351310_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab351310 Zm00024ab351310_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00024ab351310 Zm00024ab351310_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab351320 Zm00024ab351320_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab351320 Zm00024ab351320_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab351330 Zm00024ab351330_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab351350 Zm00024ab351350_P001 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab351570 Zm00024ab351570_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab351570 Zm00024ab351570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab351570 Zm00024ab351570_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab351650 Zm00024ab351650_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab351700 Zm00024ab351700_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab352010 Zm00024ab352010_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab352010 Zm00024ab352010_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab352120 Zm00024ab352120_P001 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab352240 Zm00024ab352240_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab352240 Zm00024ab352240_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab352240 Zm00024ab352240_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab352240 Zm00024ab352240_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab352240 Zm00024ab352240_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab352280 Zm00024ab352280_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab352280 Zm00024ab352280_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab352280 Zm00024ab352280_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab352280 Zm00024ab352280_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab352290 Zm00024ab352290_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab352570 Zm00024ab352570_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab352570 Zm00024ab352570_P002 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab352580 Zm00024ab352580_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00024ab352630 Zm00024ab352630_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab352770 Zm00024ab352770_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab352770 Zm00024ab352770_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab352780 Zm00024ab352780_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab352780 Zm00024ab352780_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab352780 Zm00024ab352780_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab352780 Zm00024ab352780_P002 conditional PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00024ab353060 Zm00024ab353060_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab353130 Zm00024ab353130_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab353300 Zm00024ab353300_P003 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab353380 Zm00024ab353380_P001 expected PWY-6019 pseudouridine degradation PSEUDOURIDINE-KINASE-RXN EC-2.7.1.83 Zm00024ab353610 Zm00024ab353610_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab353640 Zm00024ab353640_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab353850 Zm00024ab353850_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab353870 Zm00024ab353870_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab353870 Zm00024ab353870_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab353910 Zm00024ab353910_P001 expected PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00024ab354170 Zm00024ab354170_P001 viridiplantae PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00024ab354170 Zm00024ab354170_P002 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab354340 Zm00024ab354340_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab354340 Zm00024ab354340_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab354340 Zm00024ab354340_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab354340 Zm00024ab354340_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab354810 Zm00024ab354810_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P003 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P003 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P003 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P003 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P003 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P004 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P004 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P004 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P004 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P004 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P005 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P005 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P005 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P005 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P005 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P006 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P006 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P006 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P006 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P006 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P006 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P007 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab354930 Zm00024ab354930_P007 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P007 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab354930 Zm00024ab354930_P007 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P007 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab354930 Zm00024ab354930_P007 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab355040 Zm00024ab355040_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab355040 Zm00024ab355040_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab355040 Zm00024ab355040_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab355040 Zm00024ab355040_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355190 Zm00024ab355190_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355190 Zm00024ab355190_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355190 Zm00024ab355190_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355190 Zm00024ab355190_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355230 Zm00024ab355230_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355230 Zm00024ab355230_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355230 Zm00024ab355230_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355230 Zm00024ab355230_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355230 Zm00024ab355230_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355230 Zm00024ab355230_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355230 Zm00024ab355230_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355230 Zm00024ab355230_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355240 Zm00024ab355240_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355240 Zm00024ab355240_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355240 Zm00024ab355240_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355240 Zm00024ab355240_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355250 Zm00024ab355250_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355250 Zm00024ab355250_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355250 Zm00024ab355250_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355250 Zm00024ab355250_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355270 Zm00024ab355270_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355270 Zm00024ab355270_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355270 Zm00024ab355270_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355270 Zm00024ab355270_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab355420 Zm00024ab355420_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab355420 Zm00024ab355420_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab355420 Zm00024ab355420_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab355420 Zm00024ab355420_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab355520 Zm00024ab355520_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab355530 Zm00024ab355530_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab355580 Zm00024ab355580_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab355580 Zm00024ab355580_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00024ab355750 Zm00024ab355750_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab355920 Zm00024ab355920_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00024ab356010 Zm00024ab356010_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00024ab356080 Zm00024ab356080_P002 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab356130 Zm00024ab356130_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab356130 Zm00024ab356130_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00024ab356180 Zm00024ab356180_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00024ab356180 Zm00024ab356180_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab356400 Zm00024ab356400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab356400 Zm00024ab356400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab356400 Zm00024ab356400_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab356460 Zm00024ab356460_P001 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab356540 Zm00024ab356540_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab356540 Zm00024ab356540_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab356540 Zm00024ab356540_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab356540 Zm00024ab356540_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab356540 Zm00024ab356540_P001 excluded NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00024ab356950 Zm00024ab356950_P003 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab357090 Zm00024ab357090_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab357090 Zm00024ab357090_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab357090 Zm00024ab357090_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab357350 Zm00024ab357350_P002 conditional PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00024ab357380 Zm00024ab357380_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab357380 Zm00024ab357380_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00024ab357380 Zm00024ab357380_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab357380 Zm00024ab357380_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00024ab357440 Zm00024ab357440_P004 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab357510 Zm00024ab357510_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab357620 Zm00024ab357620_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab357620 Zm00024ab357620_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab357620 Zm00024ab357620_P001 manual LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00024ab357640 Zm00024ab357640_P001 ubiquitous PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab357720 Zm00024ab357720_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab357720 Zm00024ab357720_P001 viridiplantae PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00024ab357730 Zm00024ab357730_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00024ab357730 Zm00024ab357730_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab357740 Zm00024ab357740_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab357740 Zm00024ab357740_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab357740 Zm00024ab357740_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00024ab357750 Zm00024ab357750_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00024ab357750 Zm00024ab357750_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00024ab357750 Zm00024ab357750_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00024ab357750 Zm00024ab357750_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab357920 Zm00024ab357920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab357920 Zm00024ab357920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab357920 Zm00024ab357920_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab358210 Zm00024ab358210_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab358300 Zm00024ab358300_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab358300 Zm00024ab358300_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab358300 Zm00024ab358300_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab358310 Zm00024ab358310_P004 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab358330 Zm00024ab358330_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab358330 Zm00024ab358330_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab358330 Zm00024ab358330_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab358450 Zm00024ab358450_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab358450 Zm00024ab358450_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab358860 Zm00024ab358860_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab358860 Zm00024ab358860_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab358880 Zm00024ab358880_P002 NA SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P006 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab358910 Zm00024ab358910_P006 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00024ab359020 Zm00024ab359020_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab359300 Zm00024ab359300_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab359300 Zm00024ab359300_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab359300 Zm00024ab359300_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab359310 Zm00024ab359310_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab359310 Zm00024ab359310_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab359310 Zm00024ab359310_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab359440 Zm00024ab359440_P003 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab359650 Zm00024ab359650_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab359650 Zm00024ab359650_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab360060 Zm00024ab360060_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab360060 Zm00024ab360060_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab360060 Zm00024ab360060_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab360140 Zm00024ab360140_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab360260 Zm00024ab360260_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00024ab360280 Zm00024ab360280_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab360430 Zm00024ab360430_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab360430 Zm00024ab360430_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab360430 Zm00024ab360430_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00024ab360430 Zm00024ab360430_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00024ab360430 Zm00024ab360430_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00024ab360430 Zm00024ab360430_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab360440 Zm00024ab360440_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab360490 Zm00024ab360490_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab360490 Zm00024ab360490_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab360490 Zm00024ab360490_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab360640 Zm00024ab360640_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab360640 Zm00024ab360640_P002 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00024ab360680 Zm00024ab360680_P001 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab360690 Zm00024ab360690_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00024ab360890 Zm00024ab360890_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00024ab360890 Zm00024ab360890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab360980 Zm00024ab360980_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab360980 Zm00024ab360980_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab361050 Zm00024ab361050_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab361070 Zm00024ab361070_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab361100 Zm00024ab361100_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab361330 Zm00024ab361330_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab361430 Zm00024ab361430_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00024ab361550 Zm00024ab361550_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab361580 Zm00024ab361580_P001 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00024ab361960 Zm00024ab361960_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00024ab361960 Zm00024ab361960_P002 excluded PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab362100 Zm00024ab362100_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab362180 Zm00024ab362180_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab362280 Zm00024ab362280_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab362280 Zm00024ab362280_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab362340 Zm00024ab362340_P001 expected SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab362400 Zm00024ab362400_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab362400 Zm00024ab362400_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab362400 Zm00024ab362400_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab362400 Zm00024ab362400_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab362400 Zm00024ab362400_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab362410 Zm00024ab362410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab362410 Zm00024ab362410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab362410 Zm00024ab362410_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab362430 Zm00024ab362430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab362430 Zm00024ab362430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab362430 Zm00024ab362430_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab362630 Zm00024ab362630_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00024ab362630 Zm00024ab362630_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00024ab362630 Zm00024ab362630_P001 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab362770 Zm00024ab362770_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00024ab362770 Zm00024ab362770_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab362860 Zm00024ab362860_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab363210 Zm00024ab363210_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab363220 Zm00024ab363220_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab363220 Zm00024ab363220_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab363220 Zm00024ab363220_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab363220 Zm00024ab363220_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00024ab363370 Zm00024ab363370_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab363370 Zm00024ab363370_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab363370 Zm00024ab363370_P001 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab363740 Zm00024ab363740_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P001 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P001 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P001 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P002 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P002 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00024ab363750 Zm00024ab363750_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab364260 Zm00024ab364260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab364260 Zm00024ab364260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab364260 Zm00024ab364260_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00024ab364400 Zm00024ab364400_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab364660 Zm00024ab364660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab364660 Zm00024ab364660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab364660 Zm00024ab364660_P001 conditional PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00024ab364680 Zm00024ab364680_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab364800 Zm00024ab364800_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab364800 Zm00024ab364800_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab364800 Zm00024ab364800_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab364800 Zm00024ab364800_P004 ubiquitous PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00024ab364810 Zm00024ab364810_P001 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00024ab364810 Zm00024ab364810_P001 conditional PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00024ab364810 Zm00024ab364810_P002 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00024ab364810 Zm00024ab364810_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00024ab365380 Zm00024ab365380_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00024ab365380 Zm00024ab365380_P001 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab365480 Zm00024ab365480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab365540 Zm00024ab365540_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab365620 Zm00024ab365620_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab365620 Zm00024ab365620_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab365620 Zm00024ab365620_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab365630 Zm00024ab365630_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab365630 Zm00024ab365630_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab365630 Zm00024ab365630_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab365630 Zm00024ab365630_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab365630 Zm00024ab365630_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab365650 Zm00024ab365650_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab365660 Zm00024ab365660_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab365790 Zm00024ab365790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab365790 Zm00024ab365790_P002 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab365820 Zm00024ab365820_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab366030 Zm00024ab366030_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab366030 Zm00024ab366030_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab366030 Zm00024ab366030_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab366030 Zm00024ab366030_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab366090 Zm00024ab366090_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab366090 Zm00024ab366090_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab366180 Zm00024ab366180_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab366180 Zm00024ab366180_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P006 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366240 Zm00024ab366240_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366250 Zm00024ab366250_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366250 Zm00024ab366250_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366270 Zm00024ab366270_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366270 Zm00024ab366270_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366280 Zm00024ab366280_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366280 Zm00024ab366280_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366300 Zm00024ab366300_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366310 Zm00024ab366310_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab366310 Zm00024ab366310_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab366330 Zm00024ab366330_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab366740 Zm00024ab366740_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab366740 Zm00024ab366740_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab366740 Zm00024ab366740_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab366740 Zm00024ab366740_P001 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab366820 Zm00024ab366820_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab366820 Zm00024ab366820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab366910 Zm00024ab366910_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab366910 Zm00024ab366910_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab366910 Zm00024ab366910_P003 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab366940 Zm00024ab366940_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00024ab367200 Zm00024ab367200_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab367210 Zm00024ab367210_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab367220 Zm00024ab367220_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab367220 Zm00024ab367220_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00024ab367300 Zm00024ab367300_P005 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00024ab367310 Zm00024ab367310_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab367320 Zm00024ab367320_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab367450 Zm00024ab367450_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab368300 Zm00024ab368300_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00024ab368300 Zm00024ab368300_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab368410 Zm00024ab368410_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00024ab368410 Zm00024ab368410_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab368560 Zm00024ab368560_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab368570 Zm00024ab368570_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00024ab368680 Zm00024ab368680_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab368720 Zm00024ab368720_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab368720 Zm00024ab368720_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab368720 Zm00024ab368720_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab368720 Zm00024ab368720_P001 ubiquitous PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab369030 Zm00024ab369030_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab369030 Zm00024ab369030_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00024ab369030 Zm00024ab369030_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00024ab369030 Zm00024ab369030_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab369120 Zm00024ab369120_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00024ab369120 Zm00024ab369120_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00024ab369200 Zm00024ab369200_P001 expected PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00024ab369310 Zm00024ab369310_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab369310 Zm00024ab369310_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00024ab369310 Zm00024ab369310_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab369530 Zm00024ab369530_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab369530 Zm00024ab369530_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab369540 Zm00024ab369540_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab369540 Zm00024ab369540_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00024ab369580 Zm00024ab369580_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab369830 Zm00024ab369830_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab369890 Zm00024ab369890_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab369890 Zm00024ab369890_P001 ubiquitous PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab369960 Zm00024ab369960_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab369960 Zm00024ab369960_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab370080 Zm00024ab370080_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab370080 Zm00024ab370080_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab370160 Zm00024ab370160_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab370200 Zm00024ab370200_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab370230 Zm00024ab370230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab370230 Zm00024ab370230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab370230 Zm00024ab370230_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab370290 Zm00024ab370290_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab370290 Zm00024ab370290_P002 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00024ab370300 Zm00024ab370300_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00024ab370300 Zm00024ab370300_P001 NA PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERDECARB-RXN EC-4.1.1.65 Zm00024ab370440 Zm00024ab370440_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab370510 Zm00024ab370510_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab370510 Zm00024ab370510_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00024ab370530 Zm00024ab370530_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00024ab370800 Zm00024ab370800_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00024ab370800 Zm00024ab370800_P001 viridiplantae PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00024ab371120 Zm00024ab371120_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00024ab371120 Zm00024ab371120_P002 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab371230 Zm00024ab371230_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00024ab371270 Zm00024ab371270_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00024ab371270 Zm00024ab371270_P002 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00024ab371270 Zm00024ab371270_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab371650 Zm00024ab371650_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab371650 Zm00024ab371650_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab371650 Zm00024ab371650_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab371650 Zm00024ab371650_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab371770 Zm00024ab371770_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab371860 Zm00024ab371860_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab371880 Zm00024ab371880_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab371900 Zm00024ab371900_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab371900 Zm00024ab371900_P002 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab371910 Zm00024ab371910_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00024ab371910 Zm00024ab371910_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab372030 Zm00024ab372030_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab372090 Zm00024ab372090_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab372090 Zm00024ab372090_P002 ubiquitous PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab372510 Zm00024ab372510_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab372510 Zm00024ab372510_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab372550 Zm00024ab372550_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab372550 Zm00024ab372550_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab372850 Zm00024ab372850_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab372860 Zm00024ab372860_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab372860 Zm00024ab372860_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab372920 Zm00024ab372920_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab372950 Zm00024ab372950_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00024ab373200 Zm00024ab373200_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab373220 Zm00024ab373220_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab373280 Zm00024ab373280_P001 viridiplantae PWY-7985 oxalate degradation VI OXALATE--COA-LIGASE-RXN EC-6.2.1.8 Zm00024ab373330 Zm00024ab373330_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab373370 Zm00024ab373370_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab373380 Zm00024ab373380_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab373410 Zm00024ab373410_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab373430 Zm00024ab373430_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab373430 Zm00024ab373430_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab373430 Zm00024ab373430_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373500 Zm00024ab373500_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373500 Zm00024ab373500_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373510 Zm00024ab373510_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373510 Zm00024ab373510_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373520 Zm00024ab373520_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab373520 Zm00024ab373520_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab373630 Zm00024ab373630_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab373760 Zm00024ab373760_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab373760 Zm00024ab373760_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab373770 Zm00024ab373770_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab373770 Zm00024ab373770_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab373770 Zm00024ab373770_P001 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00024ab373800 Zm00024ab373800_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00024ab373950 Zm00024ab373950_P003 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab374050 Zm00024ab374050_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00024ab374050 Zm00024ab374050_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab374220 Zm00024ab374220_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab374220 Zm00024ab374220_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab374480 Zm00024ab374480_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab374480 Zm00024ab374480_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab374480 Zm00024ab374480_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab374480 Zm00024ab374480_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab374480 Zm00024ab374480_P001 excluded PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab374730 Zm00024ab374730_P001 conditional PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00024ab375020 Zm00024ab375020_P001 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00024ab375060 Zm00024ab375060_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab375210 Zm00024ab375210_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab375650 Zm00024ab375650_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab375650 Zm00024ab375650_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab375650 Zm00024ab375650_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab375650 Zm00024ab375650_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00024ab375650 Zm00024ab375650_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00024ab375650 Zm00024ab375650_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00024ab375650 Zm00024ab375650_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab375650 Zm00024ab375650_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00024ab375650 Zm00024ab375650_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00024ab375650 Zm00024ab375650_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00024ab375650 Zm00024ab375650_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00024ab375650 Zm00024ab375650_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab375690 Zm00024ab375690_P005 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab375730 Zm00024ab375730_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab375730 Zm00024ab375730_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab375730 Zm00024ab375730_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00024ab375730 Zm00024ab375730_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00024ab375790 Zm00024ab375790_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab375820 Zm00024ab375820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab375820 Zm00024ab375820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab375820 Zm00024ab375820_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab375820 Zm00024ab375820_P002 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab376050 Zm00024ab376050_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab376050 Zm00024ab376050_P002 viridiplantae PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00024ab376350 Zm00024ab376350_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab376540 Zm00024ab376540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab376540 Zm00024ab376540_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab376960 Zm00024ab376960_P004 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab377090 Zm00024ab377090_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00024ab377440 Zm00024ab377440_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00024ab377660 Zm00024ab377660_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00024ab377660 Zm00024ab377660_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab377860 Zm00024ab377860_P001 expected PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00024ab378230 Zm00024ab378230_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab378320 Zm00024ab378320_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab378320 Zm00024ab378320_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab378360 Zm00024ab378360_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P003 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P003 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P004 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P004 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00024ab378400 Zm00024ab378400_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab378410 Zm00024ab378410_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab378430 Zm00024ab378430_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab378430 Zm00024ab378430_P002 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00024ab378660 Zm00024ab378660_P003 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P004 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab378670 Zm00024ab378670_P004 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00024ab378690 Zm00024ab378690_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab378790 Zm00024ab378790_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab379020 Zm00024ab379020_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab379020 Zm00024ab379020_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab379020 Zm00024ab379020_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab379070 Zm00024ab379070_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00024ab379210 Zm00024ab379210_P002 manual PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab379640 Zm00024ab379640_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab379680 Zm00024ab379680_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab379680 Zm00024ab379680_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab379680 Zm00024ab379680_P003 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00024ab379740 Zm00024ab379740_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab379780 Zm00024ab379780_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab379780 Zm00024ab379780_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab379820 Zm00024ab379820_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab379820 Zm00024ab379820_P002 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab379850 Zm00024ab379850_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab380190 Zm00024ab380190_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00024ab380190 Zm00024ab380190_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab380270 Zm00024ab380270_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab380270 Zm00024ab380270_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab380270 Zm00024ab380270_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab380430 Zm00024ab380430_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab380460 Zm00024ab380460_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00024ab380500 Zm00024ab380500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab380590 Zm00024ab380590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab380590 Zm00024ab380590_P002 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab380720 Zm00024ab380720_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab381030 Zm00024ab381030_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab381050 Zm00024ab381050_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00024ab381060 Zm00024ab381060_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00024ab381090 Zm00024ab381090_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00024ab381090 Zm00024ab381090_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00024ab381090 Zm00024ab381090_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00024ab381090 Zm00024ab381090_P001 NA PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00024ab381130 Zm00024ab381130_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00024ab381130 Zm00024ab381130_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab381160 Zm00024ab381160_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab381160 Zm00024ab381160_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab381160 Zm00024ab381160_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab381310 Zm00024ab381310_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab381310 Zm00024ab381310_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00024ab381310 Zm00024ab381310_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00024ab381310 Zm00024ab381310_P002 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab381340 Zm00024ab381340_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab381340 Zm00024ab381340_P001 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00024ab381590 Zm00024ab381590_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00024ab381710 Zm00024ab381710_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00024ab381710 Zm00024ab381710_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00024ab381710 Zm00024ab381710_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P004 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00024ab381930 Zm00024ab381930_P004 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00024ab382000 Zm00024ab382000_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00024ab382000 Zm00024ab382000_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00024ab382020 Zm00024ab382020_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P006 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P007 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P008 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab382090 Zm00024ab382090_P009 expected PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P001 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P002 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P003 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P004 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P005 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00024ab382100 Zm00024ab382100_P006 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00024ab382240 Zm00024ab382240_P001 conditional PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00024ab382250 Zm00024ab382250_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00024ab382250 Zm00024ab382250_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00024ab382250 Zm00024ab382250_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00024ab382250 Zm00024ab382250_P001 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab382440 Zm00024ab382440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab382560 Zm00024ab382560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab382570 Zm00024ab382570_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab382590 Zm00024ab382590_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab382590 Zm00024ab382590_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00024ab382590 Zm00024ab382590_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00024ab382590 Zm00024ab382590_P001 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab382880 Zm00024ab382880_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab382880 Zm00024ab382880_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab382880 Zm00024ab382880_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab382880 Zm00024ab382880_P001 conditional PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab383100 Zm00024ab383100_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab383100 Zm00024ab383100_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00024ab383280 Zm00024ab383280_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00024ab383280 Zm00024ab383280_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab383280 Zm00024ab383280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab383280 Zm00024ab383280_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00024ab383280 Zm00024ab383280_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab383290 Zm00024ab383290_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab383410 Zm00024ab383410_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00024ab383600 Zm00024ab383600_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00024ab383600 Zm00024ab383600_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00024ab383600 Zm00024ab383600_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00024ab383600 Zm00024ab383600_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00024ab383600 Zm00024ab383600_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00024ab383600 Zm00024ab383600_P003 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00024ab383650 Zm00024ab383650_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab383720 Zm00024ab383720_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab383720 Zm00024ab383720_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab383720 Zm00024ab383720_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab383720 Zm00024ab383720_P001 ubiquitous PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P004 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P005 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P005 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P005 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P005 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab383850 Zm00024ab383850_P005 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00024ab384130 Zm00024ab384130_P001 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P003 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P004 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P004 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P005 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P005 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P005 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab384220 Zm00024ab384220_P005 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab384280 Zm00024ab384280_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab384670 Zm00024ab384670_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab384760 Zm00024ab384760_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab384790 Zm00024ab384790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab384790 Zm00024ab384790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab384790 Zm00024ab384790_P001 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00024ab384900 Zm00024ab384900_P001 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00024ab384900 Zm00024ab384900_P002 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00024ab384900 Zm00024ab384900_P003 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00024ab384970 Zm00024ab384970_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00024ab384970 Zm00024ab384970_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00024ab384970 Zm00024ab384970_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00024ab384970 Zm00024ab384970_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00024ab385020 Zm00024ab385020_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00024ab385020 Zm00024ab385020_P001 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab385030 Zm00024ab385030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab385030 Zm00024ab385030_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab385030 Zm00024ab385030_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab385030 Zm00024ab385030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab385030 Zm00024ab385030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab385040 Zm00024ab385040_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab385040 Zm00024ab385040_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab385040 Zm00024ab385040_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385050 Zm00024ab385050_P004 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab385120 Zm00024ab385120_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385150 Zm00024ab385150_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385160 Zm00024ab385160_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385160 Zm00024ab385160_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385180 Zm00024ab385180_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385180 Zm00024ab385180_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385200 Zm00024ab385200_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385200 Zm00024ab385200_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00024ab385200 Zm00024ab385200_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00024ab385200 Zm00024ab385200_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab385350 Zm00024ab385350_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab385350 Zm00024ab385350_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00024ab385410 Zm00024ab385410_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00024ab385410 Zm00024ab385410_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00024ab385410 Zm00024ab385410_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00024ab385550 Zm00024ab385550_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00024ab385550 Zm00024ab385550_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab385560 Zm00024ab385560_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab385560 Zm00024ab385560_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab385570 Zm00024ab385570_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab385600 Zm00024ab385600_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab385670 Zm00024ab385670_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab385750 Zm00024ab385750_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab385750 Zm00024ab385750_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab385750 Zm00024ab385750_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab385780 Zm00024ab385780_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab385780 Zm00024ab385780_P001 viridiplantae PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00024ab386030 Zm00024ab386030_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab386130 Zm00024ab386130_P003 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00024ab386260 Zm00024ab386260_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00024ab386260 Zm00024ab386260_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P002 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00024ab386270 Zm00024ab386270_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab386350 Zm00024ab386350_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab386350 Zm00024ab386350_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab386350 Zm00024ab386350_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00024ab386350 Zm00024ab386350_P004 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab386410 Zm00024ab386410_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab386410 Zm00024ab386410_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00024ab386410 Zm00024ab386410_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab386510 Zm00024ab386510_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab386510 Zm00024ab386510_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab386510 Zm00024ab386510_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab386510 Zm00024ab386510_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab386680 Zm00024ab386680_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab386680 Zm00024ab386680_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab386680 Zm00024ab386680_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab386910 Zm00024ab386910_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00024ab386990 Zm00024ab386990_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab387040 Zm00024ab387040_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab387120 Zm00024ab387120_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab387120 Zm00024ab387120_P001 expected LYSINE-DEG2-PWY lysine degradation II ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00024ab387260 Zm00024ab387260_P002 NA PWYQT-1 lysine degradation III ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00024ab387260 Zm00024ab387260_P002 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab387330 Zm00024ab387330_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab387330 Zm00024ab387330_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab387350 Zm00024ab387350_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab387350 Zm00024ab387350_P002 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00024ab387360 Zm00024ab387360_P001 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab387480 Zm00024ab387480_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab387530 Zm00024ab387530_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab387530 Zm00024ab387530_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00024ab387530 Zm00024ab387530_P003 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab387620 Zm00024ab387620_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab387620 Zm00024ab387620_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab387620 Zm00024ab387620_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00024ab387800 Zm00024ab387800_P003 NA TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00024ab387830 Zm00024ab387830_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00024ab387830 Zm00024ab387830_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00024ab387830 Zm00024ab387830_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00024ab387830 Zm00024ab387830_P004 conditional PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab388140 Zm00024ab388140_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab388140 Zm00024ab388140_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab388140 Zm00024ab388140_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab388140 Zm00024ab388140_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab388190 Zm00024ab388190_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab388210 Zm00024ab388210_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab388210 Zm00024ab388210_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab388210 Zm00024ab388210_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab388360 Zm00024ab388360_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00024ab388550 Zm00024ab388550_P002 conditional PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab388700 Zm00024ab388700_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab388920 Zm00024ab388920_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab388920 Zm00024ab388920_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab388990 Zm00024ab388990_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab389400 Zm00024ab389400_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab389400 Zm00024ab389400_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab389400 Zm00024ab389400_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab389560 Zm00024ab389560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab389560 Zm00024ab389560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab389560 Zm00024ab389560_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab389570 Zm00024ab389570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab389570 Zm00024ab389570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab389570 Zm00024ab389570_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab390130 Zm00024ab390130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab390130 Zm00024ab390130_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00024ab390130 Zm00024ab390130_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab390140 Zm00024ab390140_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab390140 Zm00024ab390140_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00024ab390150 Zm00024ab390150_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab390190 Zm00024ab390190_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab390190 Zm00024ab390190_P002 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab390380 Zm00024ab390380_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab390380 Zm00024ab390380_P001 expected PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab390510 Zm00024ab390510_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab390510 Zm00024ab390510_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab390510 Zm00024ab390510_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab390510 Zm00024ab390510_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab390710 Zm00024ab390710_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab390710 Zm00024ab390710_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab390800 Zm00024ab390800_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab390800 Zm00024ab390800_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab390810 Zm00024ab390810_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab390810 Zm00024ab390810_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab390940 Zm00024ab390940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab390940 Zm00024ab390940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab390940 Zm00024ab390940_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab391150 Zm00024ab391150_P001 expected ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P001 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P002 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P003 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P004 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P005 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P006 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00024ab391460 Zm00024ab391460_P007 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab391600 Zm00024ab391600_P002 conditional PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00024ab391840 Zm00024ab391840_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00024ab391860 Zm00024ab391860_P002 conditional LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab391930 Zm00024ab391930_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab391990 Zm00024ab391990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab391990 Zm00024ab391990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab391990 Zm00024ab391990_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab392000 Zm00024ab392000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab392000 Zm00024ab392000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab392000 Zm00024ab392000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab392010 Zm00024ab392010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab392010 Zm00024ab392010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab392010 Zm00024ab392010_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab392190 Zm00024ab392190_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab392190 Zm00024ab392190_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab392190 Zm00024ab392190_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab392190 Zm00024ab392190_P004 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab392220 Zm00024ab392220_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00024ab392330 Zm00024ab392330_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00024ab392330 Zm00024ab392330_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab392370 Zm00024ab392370_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab392370 Zm00024ab392370_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab392580 Zm00024ab392580_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab393250 Zm00024ab393250_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab393420 Zm00024ab393420_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00024ab393490 Zm00024ab393490_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab393640 Zm00024ab393640_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab393640 Zm00024ab393640_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab393640 Zm00024ab393640_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab393640 Zm00024ab393640_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00024ab393640 Zm00024ab393640_P001 excluded PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab393830 Zm00024ab393830_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab393830 Zm00024ab393830_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab393830 Zm00024ab393830_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab393830 Zm00024ab393830_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab394020 Zm00024ab394020_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab394020 Zm00024ab394020_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab394020 Zm00024ab394020_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab394060 Zm00024ab394060_P003 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab394100 Zm00024ab394100_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab394100 Zm00024ab394100_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394240 Zm00024ab394240_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394250 Zm00024ab394250_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab394290 Zm00024ab394290_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab394320 Zm00024ab394320_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00024ab394320 Zm00024ab394320_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab394350 Zm00024ab394350_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab394350 Zm00024ab394350_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab394520 Zm00024ab394520_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab394790 Zm00024ab394790_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00024ab394810 Zm00024ab394810_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00024ab394810 Zm00024ab394810_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00024ab394810 Zm00024ab394810_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00024ab394810 Zm00024ab394810_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00024ab394810 Zm00024ab394810_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab394960 Zm00024ab394960_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00024ab395000 Zm00024ab395000_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab395260 Zm00024ab395260_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab395260 Zm00024ab395260_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab395260 Zm00024ab395260_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab395260 Zm00024ab395260_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab395260 Zm00024ab395260_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab395260 Zm00024ab395260_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab395260 Zm00024ab395260_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab395270 Zm00024ab395270_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab395270 Zm00024ab395270_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab395390 Zm00024ab395390_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab395390 Zm00024ab395390_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab395390 Zm00024ab395390_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00024ab395400 Zm00024ab395400_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00024ab395400 Zm00024ab395400_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00024ab395400 Zm00024ab395400_P001 NA PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab395520 Zm00024ab395520_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab395520 Zm00024ab395520_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab395520 Zm00024ab395520_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab395520 Zm00024ab395520_P004 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab395520 Zm00024ab395520_P005 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P003 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P003 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00024ab395530 Zm00024ab395530_P003 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab395750 Zm00024ab395750_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00024ab395750 Zm00024ab395750_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab395950 Zm00024ab395950_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab396040 Zm00024ab396040_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396080 Zm00024ab396080_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396080 Zm00024ab396080_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396080 Zm00024ab396080_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396080 Zm00024ab396080_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396080 Zm00024ab396080_P006 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396100 Zm00024ab396100_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396100 Zm00024ab396100_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396120 Zm00024ab396120_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab396130 Zm00024ab396130_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab396130 Zm00024ab396130_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396150 Zm00024ab396150_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab396150 Zm00024ab396150_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab396280 Zm00024ab396280_P001 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00024ab396290 Zm00024ab396290_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab396500 Zm00024ab396500_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab396560 Zm00024ab396560_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00024ab396660 Zm00024ab396660_P005 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab396800 Zm00024ab396800_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab396800 Zm00024ab396800_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab397020 Zm00024ab397020_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00024ab397020 Zm00024ab397020_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00024ab397180 Zm00024ab397180_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00024ab397180 Zm00024ab397180_P001 expected PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab397340 Zm00024ab397340_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab397340 Zm00024ab397340_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00024ab397340 Zm00024ab397340_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab397380 Zm00024ab397380_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab397380 Zm00024ab397380_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab397380 Zm00024ab397380_P003 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00024ab397460 Zm00024ab397460_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab397520 Zm00024ab397520_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab397620 Zm00024ab397620_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00024ab397830 Zm00024ab397830_P001 conditional PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00024ab397930 Zm00024ab397930_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab398090 Zm00024ab398090_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab398090 Zm00024ab398090_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab398090 Zm00024ab398090_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00024ab398090 Zm00024ab398090_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00024ab398130 Zm00024ab398130_P001 excluded PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00024ab398240 Zm00024ab398240_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab398400 Zm00024ab398400_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab398660 Zm00024ab398660_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab398660 Zm00024ab398660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab398660 Zm00024ab398660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab398660 Zm00024ab398660_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab398750 Zm00024ab398750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab398750 Zm00024ab398750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab398750 Zm00024ab398750_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab398770 Zm00024ab398770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab398770 Zm00024ab398770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab398770 Zm00024ab398770_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00024ab398860 Zm00024ab398860_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab398870 Zm00024ab398870_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab398910 Zm00024ab398910_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab398910 Zm00024ab398910_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab398930 Zm00024ab398930_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab398930 Zm00024ab398930_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab399110 Zm00024ab399110_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00024ab399110 Zm00024ab399110_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab399210 Zm00024ab399210_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00024ab399400 Zm00024ab399400_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00024ab399400 Zm00024ab399400_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00024ab399660 Zm00024ab399660_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00024ab399850 Zm00024ab399850_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab399850 Zm00024ab399850_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00024ab399850 Zm00024ab399850_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab400010 Zm00024ab400010_P002 conditional PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00024ab400070 Zm00024ab400070_P001 viridiplantae PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00024ab400180 Zm00024ab400180_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00024ab400180 Zm00024ab400180_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00024ab400180 Zm00024ab400180_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00024ab400180 Zm00024ab400180_P002 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00024ab400300 Zm00024ab400300_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00024ab400300 Zm00024ab400300_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab400360 Zm00024ab400360_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab400360 Zm00024ab400360_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00024ab400360 Zm00024ab400360_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00024ab400360 Zm00024ab400360_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab400430 Zm00024ab400430_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab400430 Zm00024ab400430_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab400430 Zm00024ab400430_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab400670 Zm00024ab400670_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab400670 Zm00024ab400670_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00024ab400670 Zm00024ab400670_P001 ubiquitous PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00024ab400680 Zm00024ab400680_P001 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00024ab400680 Zm00024ab400680_P001 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00024ab400680 Zm00024ab400680_P001 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00024ab400680 Zm00024ab400680_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab400970 Zm00024ab400970_P001 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00024ab400980 Zm00024ab400980_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab401170 Zm00024ab401170_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab401340 Zm00024ab401340_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab401340 Zm00024ab401340_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab401470 Zm00024ab401470_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00024ab401580 Zm00024ab401580_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab401720 Zm00024ab401720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab401720 Zm00024ab401720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab401720 Zm00024ab401720_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab401880 Zm00024ab401880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab401880 Zm00024ab401880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab401880 Zm00024ab401880_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00024ab402000 Zm00024ab402000_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00024ab402000 Zm00024ab402000_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab402020 Zm00024ab402020_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab402190 Zm00024ab402190_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab402490 Zm00024ab402490_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab402490 Zm00024ab402490_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab402490 Zm00024ab402490_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00024ab402490 Zm00024ab402490_P001 conditional DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab402500 Zm00024ab402500_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab402500 Zm00024ab402500_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab402500 Zm00024ab402500_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab402500 Zm00024ab402500_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab402630 Zm00024ab402630_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00024ab402630 Zm00024ab402630_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P006 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P007 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab402850 Zm00024ab402850_P007 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00024ab402860 Zm00024ab402860_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00024ab402860 Zm00024ab402860_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab402930 Zm00024ab402930_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab403030 Zm00024ab403030_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab403200 Zm00024ab403200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab403200 Zm00024ab403200_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab403200 Zm00024ab403200_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab403460 Zm00024ab403460_P001 expected GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab403550 Zm00024ab403550_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab403690 Zm00024ab403690_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00024ab403870 Zm00024ab403870_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab403900 Zm00024ab403900_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab403900 Zm00024ab403900_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab403970 Zm00024ab403970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab404030 Zm00024ab404030_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00024ab404060 Zm00024ab404060_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00024ab404060 Zm00024ab404060_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00024ab404060 Zm00024ab404060_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00024ab404060 Zm00024ab404060_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab404310 Zm00024ab404310_P001 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404340 Zm00024ab404340_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404340 Zm00024ab404340_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404360 Zm00024ab404360_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404360 Zm00024ab404360_P001 ubiquitous PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00024ab404380 Zm00024ab404380_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab404430 Zm00024ab404430_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab404440 Zm00024ab404440_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab404450 Zm00024ab404450_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404470 Zm00024ab404470_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404470 Zm00024ab404470_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab404490 Zm00024ab404490_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404500 Zm00024ab404500_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00024ab404500 Zm00024ab404500_P001 ubiquitous PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab404560 Zm00024ab404560_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00024ab404560 Zm00024ab404560_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00024ab404600 Zm00024ab404600_P003 NA PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00024ab404620 Zm00024ab404620_P001 conditional PWY-4984 urea cycle ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00024ab404620 Zm00024ab404620_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00024ab404620 Zm00024ab404620_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00024ab404620 Zm00024ab404620_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab404650 Zm00024ab404650_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab404650 Zm00024ab404650_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab404770 Zm00024ab404770_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab404790 Zm00024ab404790_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab404790 Zm00024ab404790_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab404810 Zm00024ab404810_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab404880 Zm00024ab404880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab404880 Zm00024ab404880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab404880 Zm00024ab404880_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab404910 Zm00024ab404910_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00024ab404920 Zm00024ab404920_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00024ab404950 Zm00024ab404950_P001 ubiquitous ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab405330 Zm00024ab405330_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab405330 Zm00024ab405330_P002 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00024ab405390 Zm00024ab405390_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00024ab405390 Zm00024ab405390_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00024ab405390 Zm00024ab405390_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00024ab405390 Zm00024ab405390_P001 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab405440 Zm00024ab405440_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab405440 Zm00024ab405440_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab405450 Zm00024ab405450_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab405450 Zm00024ab405450_P002 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00024ab405500 Zm00024ab405500_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab405530 Zm00024ab405530_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00024ab405630 Zm00024ab405630_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab405740 Zm00024ab405740_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab405740 Zm00024ab405740_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab405960 Zm00024ab405960_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00024ab405960 Zm00024ab405960_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab405970 Zm00024ab405970_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab405970 Zm00024ab405970_P002 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab405970 Zm00024ab405970_P003 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00024ab406120 Zm00024ab406120_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab406360 Zm00024ab406360_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab406500 Zm00024ab406500_P001 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00024ab406620 Zm00024ab406620_P004 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab406730 Zm00024ab406730_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab406730 Zm00024ab406730_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab406730 Zm00024ab406730_P001 conditional PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab406820 Zm00024ab406820_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab406820 Zm00024ab406820_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab406820 Zm00024ab406820_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab406820 Zm00024ab406820_P001 manual PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00024ab406860 Zm00024ab406860_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00024ab406860 Zm00024ab406860_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00024ab406860 Zm00024ab406860_P003 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00024ab406970 Zm00024ab406970_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00024ab406970 Zm00024ab406970_P002 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00024ab406970 Zm00024ab406970_P003 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab406990 Zm00024ab406990_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab406990 Zm00024ab406990_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab406990 Zm00024ab406990_P003 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00024ab407060 Zm00024ab407060_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab407200 Zm00024ab407200_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab407200 Zm00024ab407200_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab407200 Zm00024ab407200_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00024ab407240 Zm00024ab407240_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab407370 Zm00024ab407370_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00024ab407380 Zm00024ab407380_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab407660 Zm00024ab407660_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00024ab407660 Zm00024ab407660_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab407670 Zm00024ab407670_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab407690 Zm00024ab407690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab407690 Zm00024ab407690_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab407690 Zm00024ab407690_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab407780 Zm00024ab407780_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab407780 Zm00024ab407780_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab407780 Zm00024ab407780_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab407780 Zm00024ab407780_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab407780 Zm00024ab407780_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab407780 Zm00024ab407780_P002 NA PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00024ab407800 Zm00024ab407800_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00024ab408010 Zm00024ab408010_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00024ab408010 Zm00024ab408010_P001 conditional PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00024ab408100 Zm00024ab408100_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab408110 Zm00024ab408110_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab408380 Zm00024ab408380_P002 NA PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00024ab408450 Zm00024ab408450_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab408460 Zm00024ab408460_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab408460 Zm00024ab408460_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab408460 Zm00024ab408460_P001 conditional PWY-5116 sakuranetin biosynthesis RXN-7773 EC-2.1.1.232 Zm00024ab408710 Zm00024ab408710_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab408800 Zm00024ab408800_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00024ab408860 Zm00024ab408860_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab408860 Zm00024ab408860_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00024ab408860 Zm00024ab408860_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00024ab408860 Zm00024ab408860_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00024ab408860 Zm00024ab408860_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00024ab408860 Zm00024ab408860_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab408870 Zm00024ab408870_P001 expected PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab409010 Zm00024ab409010_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00024ab409010 Zm00024ab409010_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab409260 Zm00024ab409260_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab409260 Zm00024ab409260_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00024ab409260 Zm00024ab409260_P003 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab409270 Zm00024ab409270_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab409280 Zm00024ab409280_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab409280 Zm00024ab409280_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab409280 Zm00024ab409280_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab409280 Zm00024ab409280_P004 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab409420 Zm00024ab409420_P001 viridiplantae PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab409570 Zm00024ab409570_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab409570 Zm00024ab409570_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P004 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00024ab409730 Zm00024ab409730_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab410180 Zm00024ab410180_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab410300 Zm00024ab410300_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab410330 Zm00024ab410330_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab410410 Zm00024ab410410_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab410410 Zm00024ab410410_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab410410 Zm00024ab410410_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab410420 Zm00024ab410420_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab410450 Zm00024ab410450_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab410450 Zm00024ab410450_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab410450 Zm00024ab410450_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab410840 Zm00024ab410840_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00024ab410840 Zm00024ab410840_P003 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00024ab411070 Zm00024ab411070_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00024ab411070 Zm00024ab411070_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00024ab411140 Zm00024ab411140_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab411170 Zm00024ab411170_P001 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab411220 Zm00024ab411220_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab411220 Zm00024ab411220_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00024ab411220 Zm00024ab411220_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00024ab411220 Zm00024ab411220_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab411350 Zm00024ab411350_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab411350 Zm00024ab411350_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab411350 Zm00024ab411350_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab411360 Zm00024ab411360_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab411360 Zm00024ab411360_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab411360 Zm00024ab411360_P001 conditional PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00024ab411390 Zm00024ab411390_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00024ab411530 Zm00024ab411530_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab411890 Zm00024ab411890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab411890 Zm00024ab411890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab411890 Zm00024ab411890_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab411940 Zm00024ab411940_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab411940 Zm00024ab411940_P003 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00024ab411950 Zm00024ab411950_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00024ab412140 Zm00024ab412140_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab412210 Zm00024ab412210_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab412210 Zm00024ab412210_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00024ab412210 Zm00024ab412210_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00024ab412300 Zm00024ab412300_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab412360 Zm00024ab412360_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00024ab412450 Zm00024ab412450_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab412580 Zm00024ab412580_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab412580 Zm00024ab412580_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab412790 Zm00024ab412790_P001 ubiquitous PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00024ab413010 Zm00024ab413010_P002 NA PWY-7985 oxalate degradation VI OXALATE--COA-LIGASE-RXN EC-6.2.1.8 Zm00024ab413050 Zm00024ab413050_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab413180 Zm00024ab413180_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00024ab413270 Zm00024ab413270_P003 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00024ab413390 Zm00024ab413390_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab413460 Zm00024ab413460_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab413460 Zm00024ab413460_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab413460 Zm00024ab413460_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab413470 Zm00024ab413470_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab413480 Zm00024ab413480_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab413610 Zm00024ab413610_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00024ab413610 Zm00024ab413610_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab413710 Zm00024ab413710_P001 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab413740 Zm00024ab413740_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab413750 Zm00024ab413750_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab413910 Zm00024ab413910_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab413990 Zm00024ab413990_P001 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00024ab414050 Zm00024ab414050_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00024ab414320 Zm00024ab414320_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00024ab414320 Zm00024ab414320_P002 expected HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab414410 Zm00024ab414410_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00024ab414410 Zm00024ab414410_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab414530 Zm00024ab414530_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00024ab414580 Zm00024ab414580_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00024ab414580 Zm00024ab414580_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00024ab414580 Zm00024ab414580_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab414610 Zm00024ab414610_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab414980 Zm00024ab414980_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab415000 Zm00024ab415000_P001 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00024ab415520 Zm00024ab415520_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab415550 Zm00024ab415550_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab415550 Zm00024ab415550_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab415550 Zm00024ab415550_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab415550 Zm00024ab415550_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab415560 Zm00024ab415560_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab415560 Zm00024ab415560_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab415560 Zm00024ab415560_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415720 Zm00024ab415720_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415740 Zm00024ab415740_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab415770 Zm00024ab415770_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab415770 Zm00024ab415770_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab415800 Zm00024ab415800_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab415800 Zm00024ab415800_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415850 Zm00024ab415850_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415860 Zm00024ab415860_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415870 Zm00024ab415870_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab415890 Zm00024ab415890_P001 conditional PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab416010 Zm00024ab416010_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00024ab416010 Zm00024ab416010_P002 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00024ab416070 Zm00024ab416070_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00024ab416070 Zm00024ab416070_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab416100 Zm00024ab416100_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab416100 Zm00024ab416100_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab416140 Zm00024ab416140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab416140 Zm00024ab416140_P002 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab416170 Zm00024ab416170_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00024ab416170 Zm00024ab416170_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab416510 Zm00024ab416510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab416780 Zm00024ab416780_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab417010 Zm00024ab417010_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab417010 Zm00024ab417010_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab417010 Zm00024ab417010_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab417050 Zm00024ab417050_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab417050 Zm00024ab417050_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab417050 Zm00024ab417050_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab417050 Zm00024ab417050_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab417050 Zm00024ab417050_P005 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab417070 Zm00024ab417070_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab417260 Zm00024ab417260_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab417550 Zm00024ab417550_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab417630 Zm00024ab417630_P001 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00024ab417700 Zm00024ab417700_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00024ab417830 Zm00024ab417830_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab417900 Zm00024ab417900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab417900 Zm00024ab417900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab417900 Zm00024ab417900_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab417900 Zm00024ab417900_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00024ab418120 Zm00024ab418120_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1884 EC-1.1.1.316 Zm00024ab418130 Zm00024ab418130_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00024ab418170 Zm00024ab418170_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab418490 Zm00024ab418490_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab418490 Zm00024ab418490_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00024ab418490 Zm00024ab418490_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab418610 Zm00024ab418610_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab418610 Zm00024ab418610_P001 ubiquitous PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00024ab418690 Zm00024ab418690_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00024ab418740 Zm00024ab418740_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00024ab418740 Zm00024ab418740_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00024ab418740 Zm00024ab418740_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00024ab418740 Zm00024ab418740_P002 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00024ab419000 Zm00024ab419000_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00024ab419000 Zm00024ab419000_P001 viridiplantae PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00024ab419120 Zm00024ab419120_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00024ab419120 Zm00024ab419120_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab419330 Zm00024ab419330_P001 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00024ab419380 Zm00024ab419380_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00024ab419380 Zm00024ab419380_P001 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419490 Zm00024ab419490_P003 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00024ab419500 Zm00024ab419500_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00024ab419500 Zm00024ab419500_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00024ab419580 Zm00024ab419580_P001 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00024ab419640 Zm00024ab419640_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00024ab419680 Zm00024ab419680_P001 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00024ab419720 Zm00024ab419720_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab419790 Zm00024ab419790_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00024ab419830 Zm00024ab419830_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00024ab419870 Zm00024ab419870_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab419950 Zm00024ab419950_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab419950 Zm00024ab419950_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab419950 Zm00024ab419950_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00024ab419950 Zm00024ab419950_P004 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab420000 Zm00024ab420000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab420000 Zm00024ab420000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab420000 Zm00024ab420000_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab420130 Zm00024ab420130_P001 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab420150 Zm00024ab420150_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab420150 Zm00024ab420150_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00024ab420170 Zm00024ab420170_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00024ab420170 Zm00024ab420170_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00024ab420170 Zm00024ab420170_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00024ab420170 Zm00024ab420170_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab420320 Zm00024ab420320_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab420460 Zm00024ab420460_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P006 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P007 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P007 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P007 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P008 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P008 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P008 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P009 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P009 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab420470 Zm00024ab420470_P009 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab420560 Zm00024ab420560_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab420660 Zm00024ab420660_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab420660 Zm00024ab420660_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab420680 Zm00024ab420680_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab420680 Zm00024ab420680_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab420680 Zm00024ab420680_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab420680 Zm00024ab420680_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab420710 Zm00024ab420710_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab420710 Zm00024ab420710_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab420740 Zm00024ab420740_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab420740 Zm00024ab420740_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab420920 Zm00024ab420920_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab421000 Zm00024ab421000_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab421000 Zm00024ab421000_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00024ab421060 Zm00024ab421060_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab421060 Zm00024ab421060_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00024ab421060 Zm00024ab421060_P001 NA PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P001 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P002 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P002 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P003 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P003 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P003 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P004 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P004 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P004 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P005 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P005 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00024ab421110 Zm00024ab421110_P005 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab421130 Zm00024ab421130_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab421430 Zm00024ab421430_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab421430 Zm00024ab421430_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab421500 Zm00024ab421500_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00024ab421500 Zm00024ab421500_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab421550 Zm00024ab421550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab421550 Zm00024ab421550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab421550 Zm00024ab421550_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab421790 Zm00024ab421790_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00024ab421800 Zm00024ab421800_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00024ab421800 Zm00024ab421800_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00024ab421800 Zm00024ab421800_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00024ab421800 Zm00024ab421800_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00024ab421800 Zm00024ab421800_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00024ab421800 Zm00024ab421800_P003 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00024ab421900 Zm00024ab421900_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00024ab422030 Zm00024ab422030_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab422070 Zm00024ab422070_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab422160 Zm00024ab422160_P001 conditional PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00024ab422240 Zm00024ab422240_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00024ab422300 Zm00024ab422300_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00024ab422320 Zm00024ab422320_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00024ab422330 Zm00024ab422330_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00024ab422340 Zm00024ab422340_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00024ab422350 Zm00024ab422350_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab422360 Zm00024ab422360_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00024ab422360 Zm00024ab422360_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab422460 Zm00024ab422460_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab422460 Zm00024ab422460_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab422500 Zm00024ab422500_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab422520 Zm00024ab422520_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab422520 Zm00024ab422520_P002 conditional PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00024ab422590 Zm00024ab422590_P001 ubiquitous PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00024ab422630 Zm00024ab422630_P001 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab422670 Zm00024ab422670_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab422730 Zm00024ab422730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab422800 Zm00024ab422800_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00024ab422810 Zm00024ab422810_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab423050 Zm00024ab423050_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab423050 Zm00024ab423050_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab423050 Zm00024ab423050_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab423050 Zm00024ab423050_P002 conditional PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00024ab423120 Zm00024ab423120_P001 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00024ab423120 Zm00024ab423120_P002 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00024ab423120 Zm00024ab423120_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab423210 Zm00024ab423210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab423210 Zm00024ab423210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab423210 Zm00024ab423210_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab423220 Zm00024ab423220_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab423220 Zm00024ab423220_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab423240 Zm00024ab423240_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab423250 Zm00024ab423250_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00024ab423270 Zm00024ab423270_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00024ab423270 Zm00024ab423270_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00024ab423270 Zm00024ab423270_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00024ab423270 Zm00024ab423270_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab423330 Zm00024ab423330_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab423330 Zm00024ab423330_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00024ab423370 Zm00024ab423370_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00024ab423380 Zm00024ab423380_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00024ab423380 Zm00024ab423380_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00024ab423380 Zm00024ab423380_P001 conditional PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab423530 Zm00024ab423530_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab423530 Zm00024ab423530_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00024ab423530 Zm00024ab423530_P001 NA PWY-112 lupeol biosynthesis RXN-111 EC-5.4.99.41 Zm00024ab423540 Zm00024ab423540_P001 conditional PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00024ab423580 Zm00024ab423580_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab423580 Zm00024ab423580_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00024ab423580 Zm00024ab423580_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00024ab423580 Zm00024ab423580_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00024ab423600 Zm00024ab423600_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00024ab423600 Zm00024ab423600_P002 ubiquitous PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab423730 Zm00024ab423730_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab423880 Zm00024ab423880_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab423880 Zm00024ab423880_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab423880 Zm00024ab423880_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00024ab423890 Zm00024ab423890_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab423890 Zm00024ab423890_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00024ab423890 Zm00024ab423890_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab423990 Zm00024ab423990_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00024ab423990 Zm00024ab423990_P002 NA RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab424050 Zm00024ab424050_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab424120 Zm00024ab424120_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00024ab424130 Zm00024ab424130_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00024ab424130 Zm00024ab424130_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00024ab424220 Zm00024ab424220_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab424250 Zm00024ab424250_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab424260 Zm00024ab424260_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00024ab424510 Zm00024ab424510_P003 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00024ab424710 Zm00024ab424710_P001 conditional PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00024ab424710 Zm00024ab424710_P001 conditional PWY-6243 bergamotene biosynthesis I RXN-8621 EC-4.2.3.81 Zm00024ab424710 Zm00024ab424710_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00024ab424960 Zm00024ab424960_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00024ab424960 Zm00024ab424960_P002 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00024ab424970 Zm00024ab424970_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00024ab424980 Zm00024ab424980_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab425120 Zm00024ab425120_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab425120 Zm00024ab425120_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00024ab425120 Zm00024ab425120_P001 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab425140 Zm00024ab425140_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab425160 Zm00024ab425160_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab425160 Zm00024ab425160_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab425160 Zm00024ab425160_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00024ab425290 Zm00024ab425290_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab425370 Zm00024ab425370_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab425370 Zm00024ab425370_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab425740 Zm00024ab425740_P004 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab425740 Zm00024ab425740_P004 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab425750 Zm00024ab425750_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab425750 Zm00024ab425750_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab425750 Zm00024ab425750_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab425750 Zm00024ab425750_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00024ab425750 Zm00024ab425750_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00024ab425850 Zm00024ab425850_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab426190 Zm00024ab426190_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab426220 Zm00024ab426220_P001 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00024ab426360 Zm00024ab426360_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00024ab426370 Zm00024ab426370_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00024ab426380 Zm00024ab426380_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab426380 Zm00024ab426380_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab426390 Zm00024ab426390_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00024ab426400 Zm00024ab426400_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab426760 Zm00024ab426760_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab426760 Zm00024ab426760_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab426780 Zm00024ab426780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab426780 Zm00024ab426780_P002 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00024ab426830 Zm00024ab426830_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab426870 Zm00024ab426870_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426960 Zm00024ab426960_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab426970 Zm00024ab426970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426970 Zm00024ab426970_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426970 Zm00024ab426970_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab426990 Zm00024ab426990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426990 Zm00024ab426990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab426990 Zm00024ab426990_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab427000 Zm00024ab427000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427000 Zm00024ab427000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427000 Zm00024ab427000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab427050 Zm00024ab427050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427050 Zm00024ab427050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427050 Zm00024ab427050_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab427080 Zm00024ab427080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427080 Zm00024ab427080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427080 Zm00024ab427080_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab427090 Zm00024ab427090_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427090 Zm00024ab427090_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427090 Zm00024ab427090_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab427100 Zm00024ab427100_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427100 Zm00024ab427100_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab427100 Zm00024ab427100_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab427110 Zm00024ab427110_P001 viridiplantae SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab427120 Zm00024ab427120_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab427120 Zm00024ab427120_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab427120 Zm00024ab427120_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab427120 Zm00024ab427120_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00024ab427120 Zm00024ab427120_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab427230 Zm00024ab427230_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00024ab427230 Zm00024ab427230_P002 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab427260 Zm00024ab427260_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab427260 Zm00024ab427260_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00024ab427270 Zm00024ab427270_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00024ab427270 Zm00024ab427270_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCONOLACT-RXN EC-3.1.1.17 Zm00024ab427370 Zm00024ab427370_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOLACT-RXN EC-3.1.1.17 Zm00024ab427370 Zm00024ab427370_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00024ab427570 Zm00024ab427570_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00024ab427850 Zm00024ab427850_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab427930 Zm00024ab427930_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab427990 Zm00024ab427990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab427990 Zm00024ab427990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab427990 Zm00024ab427990_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428040 Zm00024ab428040_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428060 Zm00024ab428060_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428070 Zm00024ab428070_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428080 Zm00024ab428080_P001 ubiquitous PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00024ab428140 Zm00024ab428140_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428150 Zm00024ab428150_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00024ab428150 Zm00024ab428150_P004 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab428470 Zm00024ab428470_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab428470 Zm00024ab428470_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab428470 Zm00024ab428470_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00024ab428470 Zm00024ab428470_P002 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab428600 Zm00024ab428600_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00024ab428620 Zm00024ab428620_P001 NA ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00024ab428630 Zm00024ab428630_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab428680 Zm00024ab428680_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab428680 Zm00024ab428680_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00024ab428680 Zm00024ab428680_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00024ab428680 Zm00024ab428680_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab428830 Zm00024ab428830_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab428830 Zm00024ab428830_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab429120 Zm00024ab429120_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab429120 Zm00024ab429120_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab429120 Zm00024ab429120_P001 conditional PWY-4261 glycerol degradation I RXN-15745 EC-1.1.5.3 Zm00024ab429140 Zm00024ab429140_P001 viridiplantae PWY-6952 glycerophosphodiester degradation RXN-15745 EC-1.1.5.3 Zm00024ab429140 Zm00024ab429140_P001 conditional PWY-6118 glycerol-3-phosphate shuttle RXN-15745 EC-1.1.5.3 Zm00024ab429140 Zm00024ab429140_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00024ab429320 Zm00024ab429320_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab429320 Zm00024ab429320_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00024ab429380 Zm00024ab429380_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00024ab429380 Zm00024ab429380_P001 ubiquitous OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00024ab429480 Zm00024ab429480_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab429610 Zm00024ab429610_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00024ab429850 Zm00024ab429850_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab429930 Zm00024ab429930_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab430110 Zm00024ab430110_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab430110 Zm00024ab430110_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab430110 Zm00024ab430110_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00024ab430110 Zm00024ab430110_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00024ab430120 Zm00024ab430120_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab430230 Zm00024ab430230_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab430230 Zm00024ab430230_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab430230 Zm00024ab430230_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00024ab430230 Zm00024ab430230_P002 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00024ab430280 Zm00024ab430280_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab430340 Zm00024ab430340_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab430340 Zm00024ab430340_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00024ab430390 Zm00024ab430390_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00024ab430390 Zm00024ab430390_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00024ab430420 Zm00024ab430420_P003 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab430490 Zm00024ab430490_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab430510 Zm00024ab430510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab430610 Zm00024ab430610_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00024ab430740 Zm00024ab430740_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00024ab430740 Zm00024ab430740_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab430940 Zm00024ab430940_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00024ab430980 Zm00024ab430980_P001 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab431310 Zm00024ab431310_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00024ab431310 Zm00024ab431310_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00024ab431440 Zm00024ab431440_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00024ab431450 Zm00024ab431450_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00024ab431450 Zm00024ab431450_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00024ab431450 Zm00024ab431450_P003 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00024ab431920 Zm00024ab431920_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00024ab432010 Zm00024ab432010_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00024ab432010 Zm00024ab432010_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab432090 Zm00024ab432090_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab432100 Zm00024ab432100_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00024ab432110 Zm00024ab432110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab432320 Zm00024ab432320_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab432320 Zm00024ab432320_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00024ab432510 Zm00024ab432510_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab432520 Zm00024ab432520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab432520 Zm00024ab432520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab432520 Zm00024ab432520_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00024ab432590 Zm00024ab432590_P001 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab432630 Zm00024ab432630_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00024ab432630 Zm00024ab432630_P001 expected PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab432970 Zm00024ab432970_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab432970 Zm00024ab432970_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab432970 Zm00024ab432970_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab432990 Zm00024ab432990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab432990 Zm00024ab432990_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00024ab433120 Zm00024ab433120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab433210 Zm00024ab433210_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab433230 Zm00024ab433230_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab433240 Zm00024ab433240_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00024ab433610 Zm00024ab433610_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab433640 Zm00024ab433640_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab433650 Zm00024ab433650_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00024ab433650 Zm00024ab433650_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab433690 Zm00024ab433690_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00024ab433690 Zm00024ab433690_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00024ab433710 Zm00024ab433710_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00024ab433760 Zm00024ab433760_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00024ab433760 Zm00024ab433760_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00024ab433760 Zm00024ab433760_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00024ab434070 Zm00024ab434070_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab434190 Zm00024ab434190_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00024ab434190 Zm00024ab434190_P002 expected CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab434270 Zm00024ab434270_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434280 Zm00024ab434280_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab434330 Zm00024ab434330_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab434350 Zm00024ab434350_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab434380 Zm00024ab434380_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab434470 Zm00024ab434470_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab434570 Zm00024ab434570_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00024ab434570 Zm00024ab434570_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab434590 Zm00024ab434590_P001 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00024ab434600 Zm00024ab434600_P001 expected PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00024ab434680 Zm00024ab434680_P001 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00024ab434680 Zm00024ab434680_P002 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00024ab434680 Zm00024ab434680_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab434760 Zm00024ab434760_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab434760 Zm00024ab434760_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab434760 Zm00024ab434760_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab434760 Zm00024ab434760_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00024ab434760 Zm00024ab434760_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab434800 Zm00024ab434800_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab434810 Zm00024ab434810_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00024ab434810 Zm00024ab434810_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab434830 Zm00024ab434830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab434830 Zm00024ab434830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00024ab434830 Zm00024ab434830_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00024ab434960 Zm00024ab434960_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00024ab435040 Zm00024ab435040_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00024ab435160 Zm00024ab435160_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab435200 Zm00024ab435200_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00024ab435250 Zm00024ab435250_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00024ab435250 Zm00024ab435250_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00024ab435340 Zm00024ab435340_P001 viridiplantae PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00024ab435620 Zm00024ab435620_P001 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00024ab435690 Zm00024ab435690_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab435840 Zm00024ab435840_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab435880 Zm00024ab435880_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00024ab435930 Zm00024ab435930_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00024ab435930 Zm00024ab435930_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab435950 Zm00024ab435950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab435950 Zm00024ab435950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab435950 Zm00024ab435950_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-7569 EC-2.1.1.329 Zm00024ab436400 Zm00024ab436400_P001 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00024ab436410 Zm00024ab436410_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00024ab436570 Zm00024ab436570_P001 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab436600 Zm00024ab436600_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00024ab436600 Zm00024ab436600_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab436690 Zm00024ab436690_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab436700 Zm00024ab436700_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00024ab436700 Zm00024ab436700_P002 conditional GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab436860 Zm00024ab436860_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00024ab436860 Zm00024ab436860_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab436950 Zm00024ab436950_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab437080 Zm00024ab437080_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab437080 Zm00024ab437080_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00024ab437150 Zm00024ab437150_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab437360 Zm00024ab437360_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab437360 Zm00024ab437360_P002 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00024ab437540 Zm00024ab437540_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab437620 Zm00024ab437620_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab437630 Zm00024ab437630_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00024ab437810 Zm00024ab437810_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00024ab437810 Zm00024ab437810_P001 conditional GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab437980 Zm00024ab437980_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00024ab437980 Zm00024ab437980_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab438040 Zm00024ab438040_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab438040 Zm00024ab438040_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00024ab438040 Zm00024ab438040_P003 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00024ab438050 Zm00024ab438050_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab438220 Zm00024ab438220_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00024ab438440 Zm00024ab438440_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00024ab438610 Zm00024ab438610_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab438820 Zm00024ab438820_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab438820 Zm00024ab438820_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab438820 Zm00024ab438820_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00024ab438820 Zm00024ab438820_P002 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00024ab439110 Zm00024ab439110_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab439210 Zm00024ab439210_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab439210 Zm00024ab439210_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab439370 Zm00024ab439370_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00024ab439370 Zm00024ab439370_P001 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00024ab439380 Zm00024ab439380_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab439530 Zm00024ab439530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab439530 Zm00024ab439530_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00024ab439710 Zm00024ab439710_P001 expected PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab439720 Zm00024ab439720_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00024ab439720 Zm00024ab439720_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab439720 Zm00024ab439720_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab439740 Zm00024ab439740_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab439740 Zm00024ab439740_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab439740 Zm00024ab439740_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00024ab439740 Zm00024ab439740_P004 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00024ab439780 Zm00024ab439780_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab439780 Zm00024ab439780_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00024ab439780 Zm00024ab439780_P001 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00024ab440200 Zm00024ab440200_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab440200 Zm00024ab440200_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab440200 Zm00024ab440200_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00024ab440200 Zm00024ab440200_P001 manual PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00024ab440540 Zm00024ab440540_P001 ubiquitous PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00024ab440930 Zm00024ab440930_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00024ab440980 Zm00024ab440980_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00024ab440980 Zm00024ab440980_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab441010 Zm00024ab441010_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00024ab441010 Zm00024ab441010_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00024ab441080 Zm00024ab441080_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00024ab441110 Zm00024ab441110_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00024ab441110 Zm00024ab441110_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab441160 Zm00024ab441160_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab441160 Zm00024ab441160_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab441160 Zm00024ab441160_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab441160 Zm00024ab441160_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab441160 Zm00024ab441160_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00024ab441160 Zm00024ab441160_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab441160 Zm00024ab441160_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00024ab441160 Zm00024ab441160_P002 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00024ab441400 Zm00024ab441400_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00024ab441540 Zm00024ab441540_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00024ab441540 Zm00024ab441540_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00024ab441540 Zm00024ab441540_P001 NA PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab441550 Zm00024ab441550_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00024ab441550 Zm00024ab441550_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab441580 Zm00024ab441580_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00024ab441620 Zm00024ab441620_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab441690 Zm00024ab441690_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab441750 Zm00024ab441750_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab441800 Zm00024ab441800_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab441800 Zm00024ab441800_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab441800 Zm00024ab441800_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab441950 Zm00024ab441950_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab441950 Zm00024ab441950_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00024ab441960 Zm00024ab441960_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00024ab441960 Zm00024ab441960_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab441960 Zm00024ab441960_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab441960 Zm00024ab441960_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00024ab441970 Zm00024ab441970_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00024ab441970 Zm00024ab441970_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab442030 Zm00024ab442030_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab442030 Zm00024ab442030_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab442130 Zm00024ab442130_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00024ab442130 Zm00024ab442130_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab442170 Zm00024ab442170_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00024ab442240 Zm00024ab442240_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab442280 Zm00024ab442280_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab442280 Zm00024ab442280_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab442280 Zm00024ab442280_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab442280 Zm00024ab442280_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00024ab442280 Zm00024ab442280_P005 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab442320 Zm00024ab442320_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab442320 Zm00024ab442320_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab442320 Zm00024ab442320_P003 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab442420 Zm00024ab442420_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00024ab442420 Zm00024ab442420_P002 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab442430 Zm00024ab442430_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab442430 Zm00024ab442430_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab442430 Zm00024ab442430_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab442430 Zm00024ab442430_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab442710 Zm00024ab442710_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00024ab442830 Zm00024ab442830_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab442860 Zm00024ab442860_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00024ab442860 Zm00024ab442860_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00024ab442910 Zm00024ab442910_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00024ab442980 Zm00024ab442980_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00024ab443170 Zm00024ab443170_P004 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00024ab443250 Zm00024ab443250_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00024ab443250 Zm00024ab443250_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P002 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P003 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P003 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00024ab443270 Zm00024ab443270_P003 expected PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00024ab443280 Zm00024ab443280_P001 viridiplantae PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab443430 Zm00024ab443430_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00024ab443430 Zm00024ab443430_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00024ab443450 Zm00024ab443450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00024ab443450 Zm00024ab443450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00024ab443450 Zm00024ab443450_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00024ab443590 Zm00024ab443590_P003 NA PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00024ab443600 Zm00024ab443600_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00024ab443600 Zm00024ab443600_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00024ab443700 Zm00024ab443700_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00024ab443740 Zm00024ab443740_P003 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab443800 Zm00024ab443800_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00024ab443820 Zm00024ab443820_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab443830 Zm00024ab443830_P001 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00024ab443850 Zm00024ab443850_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00024ab443850 Zm00024ab443850_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00024ab443850 Zm00024ab443850_P003 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00024ab443860 Zm00024ab443860_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00024ab443940 Zm00024ab443940_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00024ab443970 Zm00024ab443970_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab444000 Zm00024ab444000_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00024ab444000 Zm00024ab444000_P002 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00024ab444050 Zm00024ab444050_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab444080 Zm00024ab444080_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00024ab444180 Zm00024ab444180_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00024ab444220 Zm00024ab444220_P001 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROTATE-DEHYDROGENASE-RXN EC-1.3.5.2 Zm00024ab444250 Zm00024ab444250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab444340 Zm00024ab444340_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab444340 Zm00024ab444340_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab444340 Zm00024ab444340_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00024ab444340 Zm00024ab444340_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab444380 Zm00024ab444380_P001 viridiplantae PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab444550 Zm00024ab444550_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00024ab444550 Zm00024ab444550_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00024ab444680 Zm00024ab444680_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00024ab444680 Zm00024ab444680_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00024ab444690 Zm00024ab444690_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab444720 Zm00024ab444720_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00024ab444720 Zm00024ab444720_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00024ab444720 Zm00024ab444720_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00024ab444720 Zm00024ab444720_P001 conditional PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00024ab444860 Zm00024ab444860_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00024ab444880 Zm00024ab444880_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab444930 Zm00024ab444930_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00024ab445050 Zm00024ab445050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab445050 Zm00024ab445050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00024ab445050 Zm00024ab445050_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis GMP-SYN-GLUT-RXN EC-6.3.5.2 Zm00024ab445080 Zm00024ab445080_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00024ab445230 Zm00024ab445230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445580 Zm00024ab445580_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445580 Zm00024ab445580_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445600 Zm00024ab445600_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445600 Zm00024ab445600_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab445750 Zm00024ab445750_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445780 Zm00024ab445780_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445780 Zm00024ab445780_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445800 Zm00024ab445800_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab445800 Zm00024ab445800_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab445930 Zm00024ab445930_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab445960 Zm00024ab445960_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab446030 Zm00024ab446030_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab446060 Zm00024ab446060_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab446060 Zm00024ab446060_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab446110 Zm00024ab446110_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab446110 Zm00024ab446110_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab446170 Zm00024ab446170_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab446360 Zm00024ab446360_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab446420 Zm00024ab446420_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab446420 Zm00024ab446420_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00024ab446740 Zm00024ab446740_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab446750 Zm00024ab446750_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab447250 Zm00024ab447250_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab447280 Zm00024ab447280_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab447340 Zm00024ab447340_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab447370 Zm00024ab447370_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab447370 Zm00024ab447370_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447420 Zm00024ab447420_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447420 Zm00024ab447420_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab447480 Zm00024ab447480_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447770 Zm00024ab447770_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447770 Zm00024ab447770_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447780 Zm00024ab447780_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab447780 Zm00024ab447780_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab447800 Zm00024ab447800_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab447870 Zm00024ab447870_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab447900 Zm00024ab447900_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab447990 Zm00024ab447990_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab448050 Zm00024ab448050_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab448080 Zm00024ab448080_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab448180 Zm00024ab448180_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab448180 Zm00024ab448180_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab448240 Zm00024ab448240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab448540 Zm00024ab448540_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab448540 Zm00024ab448540_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab448590 Zm00024ab448590_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00024ab448590 Zm00024ab448590_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00024ab448620 Zm00024ab448620_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab448660 Zm00024ab448660_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab448680 Zm00024ab448680_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00024ab449100 Zm00024ab449100_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00024ab449110 Zm00024ab449110_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab449190 Zm00024ab449190_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab449200 Zm00024ab449200_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab449220 Zm00024ab449220_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00024ab449220 Zm00024ab449220_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab449230 Zm00024ab449230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab449460 Zm00024ab449460_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00024ab449460 Zm00024ab449460_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab449620 Zm00024ab449620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab449870 Zm00024ab449870_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00024ab450090 Zm00024ab450090_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab450210 Zm00024ab450210_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00024ab450220 Zm00024ab450220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab450310 Zm00024ab450310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab450400 Zm00024ab450400_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00024ab450520 Zm00024ab450520_P001 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab450640 Zm00024ab450640_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab450640 Zm00024ab450640_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab450640 Zm00024ab450640_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab450650 Zm00024ab450650_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00024ab450650 Zm00024ab450650_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00024ab450650 Zm00024ab450650_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab450760 Zm00024ab450760_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00024ab450830 Zm00024ab450830_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab450910 Zm00024ab450910_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00024ab450930 Zm00024ab450930_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab451470 Zm00024ab451470_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00024ab451470 Zm00024ab451470_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab451470 Zm00024ab451470_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00024ab451470 Zm00024ab451470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00024ab452240 Zm00024ab452240_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00024ab452350 Zm00024ab452350_P001 conditional