Pathway ID Description Reaction ID EC number Gene Model ID Protein ID Evidence PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab000030 Zm00025ab000030_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab000040 Zm00025ab000040_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab000040 Zm00025ab000040_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab000040 Zm00025ab000040_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab000040 Zm00025ab000040_P004 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000170 Zm00025ab000170_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000180 Zm00025ab000180_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000240 Zm00025ab000240_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000250 Zm00025ab000250_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000400 Zm00025ab000400_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab000410 Zm00025ab000410_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab000730 Zm00025ab000730_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab000950 Zm00025ab000950_P001 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00025ab000960 Zm00025ab000960_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00025ab000960 Zm00025ab000960_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab001050 Zm00025ab001050_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab001050 Zm00025ab001050_P002 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab001050 Zm00025ab001050_P003 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab001050 Zm00025ab001050_P004 viridiplantae PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00025ab001350 Zm00025ab001350_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00025ab001350 Zm00025ab001350_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab001390 Zm00025ab001390_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab001390 Zm00025ab001390_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab001390 Zm00025ab001390_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab001390 Zm00025ab001390_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab001400 Zm00025ab001400_P003 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab001530 Zm00025ab001530_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab001530 Zm00025ab001530_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab001530 Zm00025ab001530_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001560 Zm00025ab001560_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001560 Zm00025ab001560_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab001590 Zm00025ab001590_P006 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P003 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P004 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P005 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P006 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab001700 Zm00025ab001700_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab001740 Zm00025ab001740_P002 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab001780 Zm00025ab001780_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab001780 Zm00025ab001780_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab001940 Zm00025ab001940_P003 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab002040 Zm00025ab002040_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab002040 Zm00025ab002040_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab002040 Zm00025ab002040_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab002040 Zm00025ab002040_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab002260 Zm00025ab002260_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab002260 Zm00025ab002260_P002 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab002530 Zm00025ab002530_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab002530 Zm00025ab002530_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab002530 Zm00025ab002530_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab002630 Zm00025ab002630_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab002630 Zm00025ab002630_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab002680 Zm00025ab002680_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab002710 Zm00025ab002710_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab002710 Zm00025ab002710_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab002710 Zm00025ab002710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab002710 Zm00025ab002710_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab002710 Zm00025ab002710_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab002720 Zm00025ab002720_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab002720 Zm00025ab002720_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab002730 Zm00025ab002730_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab002800 Zm00025ab002800_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab002840 Zm00025ab002840_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab002880 Zm00025ab002880_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab002880 Zm00025ab002880_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab003060 Zm00025ab003060_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab003070 Zm00025ab003070_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab003070 Zm00025ab003070_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab003160 Zm00025ab003160_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003190 Zm00025ab003190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003190 Zm00025ab003190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003190 Zm00025ab003190_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003200 Zm00025ab003200_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003200 Zm00025ab003200_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003200 Zm00025ab003200_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003210 Zm00025ab003210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003210 Zm00025ab003210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003210 Zm00025ab003210_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003220 Zm00025ab003220_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003220 Zm00025ab003220_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003220 Zm00025ab003220_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab003290 Zm00025ab003290_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00025ab003300 Zm00025ab003300_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab003370 Zm00025ab003370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab003370 Zm00025ab003370_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab003410 Zm00025ab003410_P003 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab003780 Zm00025ab003780_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab003790 Zm00025ab003790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab003960 Zm00025ab003960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab003970 Zm00025ab003970_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab003980 Zm00025ab003980_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab003980 Zm00025ab003980_P002 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab004050 Zm00025ab004050_P004 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P004 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P005 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab004740 Zm00025ab004740_P006 expected THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab004760 Zm00025ab004760_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab004880 Zm00025ab004880_P002 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab004890 Zm00025ab004890_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab005040 Zm00025ab005040_P001 expected SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00025ab005070 Zm00025ab005070_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab005350 Zm00025ab005350_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab005350 Zm00025ab005350_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab005350 Zm00025ab005350_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab005370 Zm00025ab005370_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab005390 Zm00025ab005390_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab005390 Zm00025ab005390_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab005390 Zm00025ab005390_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab005390 Zm00025ab005390_P002 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab005440 Zm00025ab005440_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab005440 Zm00025ab005440_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab005440 Zm00025ab005440_P001 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab005480 Zm00025ab005480_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab005480 Zm00025ab005480_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab005480 Zm00025ab005480_P003 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab005480 Zm00025ab005480_P004 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab005480 Zm00025ab005480_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab005640 Zm00025ab005640_P003 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab005690 Zm00025ab005690_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab005690 Zm00025ab005690_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab005740 Zm00025ab005740_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab005740 Zm00025ab005740_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab005740 Zm00025ab005740_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab005740 Zm00025ab005740_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab006030 Zm00025ab006030_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P006 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P006 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P006 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P007 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P007 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab006050 Zm00025ab006050_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab006070 Zm00025ab006070_P001 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P001 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P002 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P002 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P003 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P003 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P004 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab006130 Zm00025ab006130_P004 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab006250 Zm00025ab006250_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00025ab006390 Zm00025ab006390_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab006520 Zm00025ab006520_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab006520 Zm00025ab006520_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab006520 Zm00025ab006520_P003 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab006630 Zm00025ab006630_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab006630 Zm00025ab006630_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab006630 Zm00025ab006630_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab006680 Zm00025ab006680_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab006680 Zm00025ab006680_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab006730 Zm00025ab006730_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab006730 Zm00025ab006730_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab006730 Zm00025ab006730_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab007040 Zm00025ab007040_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab007040 Zm00025ab007040_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab007090 Zm00025ab007090_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab007090 Zm00025ab007090_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00025ab007100 Zm00025ab007100_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00025ab007100 Zm00025ab007100_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00025ab007100 Zm00025ab007100_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00025ab007100 Zm00025ab007100_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00025ab007100 Zm00025ab007100_P005 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab007350 Zm00025ab007350_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab007350 Zm00025ab007350_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007450 Zm00025ab007450_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab007460 Zm00025ab007460_P005 conditional PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00025ab007500 Zm00025ab007500_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00025ab007500 Zm00025ab007500_P002 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00025ab007500 Zm00025ab007500_P003 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00025ab007500 Zm00025ab007500_P004 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00025ab007500 Zm00025ab007500_P005 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab007890 Zm00025ab007890_P004 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab008180 Zm00025ab008180_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab008390 Zm00025ab008390_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab008500 Zm00025ab008500_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab008740 Zm00025ab008740_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab008740 Zm00025ab008740_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab008820 Zm00025ab008820_P001 viridiplantae PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00025ab008910 Zm00025ab008910_P001 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00025ab008910 Zm00025ab008910_P002 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab008990 Zm00025ab008990_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab008990 Zm00025ab008990_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab009080 Zm00025ab009080_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab009170 Zm00025ab009170_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab009170 Zm00025ab009170_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab009170 Zm00025ab009170_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab009170 Zm00025ab009170_P004 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab009350 Zm00025ab009350_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab009350 Zm00025ab009350_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab009350 Zm00025ab009350_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab009350 Zm00025ab009350_P004 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00025ab009450 Zm00025ab009450_P001 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00025ab009450 Zm00025ab009450_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P003 expected HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00025ab009450 Zm00025ab009450_P004 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00025ab009450 Zm00025ab009450_P004 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab009450 Zm00025ab009450_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab009600 Zm00025ab009600_P003 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab009610 Zm00025ab009610_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab009650 Zm00025ab009650_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab009650 Zm00025ab009650_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab009650 Zm00025ab009650_P001 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab009710 Zm00025ab009710_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab009740 Zm00025ab009740_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab009740 Zm00025ab009740_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab009740 Zm00025ab009740_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab009740 Zm00025ab009740_P004 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab009790 Zm00025ab009790_P001 NA NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00025ab009860 Zm00025ab009860_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00025ab009860 Zm00025ab009860_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00025ab009860 Zm00025ab009860_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00025ab009860 Zm00025ab009860_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00025ab009860 Zm00025ab009860_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab009890 Zm00025ab009890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab009890 Zm00025ab009890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab009890 Zm00025ab009890_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab009890 Zm00025ab009890_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab009960 Zm00025ab009960_P001 expected PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab010000 Zm00025ab010000_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab010000 Zm00025ab010000_P001 conditional PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00025ab010140 Zm00025ab010140_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00025ab010140 Zm00025ab010140_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P004 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P005 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P005 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab010180 Zm00025ab010180_P005 viridiplantae KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab010380 Zm00025ab010380_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab010380 Zm00025ab010380_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010480 Zm00025ab010480_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010480 Zm00025ab010480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010480 Zm00025ab010480_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010490 Zm00025ab010490_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010510 Zm00025ab010510_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010510 Zm00025ab010510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010510 Zm00025ab010510_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010520 Zm00025ab010520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010520 Zm00025ab010520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010520 Zm00025ab010520_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab010640 Zm00025ab010640_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab010640 Zm00025ab010640_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab010640 Zm00025ab010640_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab010640 Zm00025ab010640_P004 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab010770 Zm00025ab010770_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010770 Zm00025ab010770_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab010770 Zm00025ab010770_P004 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010770 Zm00025ab010770_P004 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010780 Zm00025ab010780_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010780 Zm00025ab010780_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab010780 Zm00025ab010780_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab010780 Zm00025ab010780_P002 viridiplantae PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab010890 Zm00025ab010890_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab010960 Zm00025ab010960_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab011050 Zm00025ab011050_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab011050 Zm00025ab011050_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab011050 Zm00025ab011050_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab011050 Zm00025ab011050_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab011050 Zm00025ab011050_P005 conditional PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00025ab011160 Zm00025ab011160_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00025ab011160 Zm00025ab011160_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab011200 Zm00025ab011200_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab011200 Zm00025ab011200_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab011200 Zm00025ab011200_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab011270 Zm00025ab011270_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab011270 Zm00025ab011270_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab011270 Zm00025ab011270_P001 manual PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab011380 Zm00025ab011380_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab011440 Zm00025ab011440_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab011440 Zm00025ab011440_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab011440 Zm00025ab011440_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab011580 Zm00025ab011580_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab011580 Zm00025ab011580_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab011580 Zm00025ab011580_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab011590 Zm00025ab011590_P001 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00025ab011610 Zm00025ab011610_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00025ab011610 Zm00025ab011610_P002 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab011710 Zm00025ab011710_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab011750 Zm00025ab011750_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab011750 Zm00025ab011750_P002 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab011810 Zm00025ab011810_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab011810 Zm00025ab011810_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab011810 Zm00025ab011810_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P003 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab011810 Zm00025ab011810_P004 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab011810 Zm00025ab011810_P004 manual PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab011980 Zm00025ab011980_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab011990 Zm00025ab011990_P001 viridiplantae PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab012080 Zm00025ab012080_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab012110 Zm00025ab012110_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab012160 Zm00025ab012160_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab012160 Zm00025ab012160_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab012160 Zm00025ab012160_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab012160 Zm00025ab012160_P002 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab012350 Zm00025ab012350_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012540 Zm00025ab012540_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012560 Zm00025ab012560_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab012580 Zm00025ab012580_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab012640 Zm00025ab012640_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab012730 Zm00025ab012730_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab012730 Zm00025ab012730_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab012730 Zm00025ab012730_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab012750 Zm00025ab012750_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab012860 Zm00025ab012860_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab012950 Zm00025ab012950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab012950 Zm00025ab012950_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab012960 Zm00025ab012960_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab012960 Zm00025ab012960_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab013340 Zm00025ab013340_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab013340 Zm00025ab013340_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab013350 Zm00025ab013350_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab013350 Zm00025ab013350_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab013350 Zm00025ab013350_P003 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab013430 Zm00025ab013430_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab013430 Zm00025ab013430_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) GLUTAMATE-N-ACETYLTRANSFERASE-RXN EC-2.3.1.35 Zm00025ab013430 Zm00025ab013430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab013790 Zm00025ab013790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab013790 Zm00025ab013790_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab013790 Zm00025ab013790_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab013800 Zm00025ab013800_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab013800 Zm00025ab013800_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab013800 Zm00025ab013800_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab013800 Zm00025ab013800_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab013910 Zm00025ab013910_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab013910 Zm00025ab013910_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab013910 Zm00025ab013910_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab013930 Zm00025ab013930_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab013930 Zm00025ab013930_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab013930 Zm00025ab013930_P003 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab013930 Zm00025ab013930_P004 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab013930 Zm00025ab013930_P005 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab014000 Zm00025ab014000_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab014000 Zm00025ab014000_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab014000 Zm00025ab014000_P003 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab014040 Zm00025ab014040_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab014070 Zm00025ab014070_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab014170 Zm00025ab014170_P001 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P002 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P003 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P003 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P003 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab014240 Zm00025ab014240_P003 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab014290 Zm00025ab014290_P004 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab014340 Zm00025ab014340_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab014340 Zm00025ab014340_P002 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab014350 Zm00025ab014350_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab014350 Zm00025ab014350_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab014360 Zm00025ab014360_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab014460 Zm00025ab014460_P003 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab014480 Zm00025ab014480_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00025ab014480 Zm00025ab014480_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab014480 Zm00025ab014480_P002 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00025ab014480 Zm00025ab014480_P002 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab014480 Zm00025ab014480_P003 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00025ab014480 Zm00025ab014480_P003 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab014510 Zm00025ab014510_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab014730 Zm00025ab014730_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab014730 Zm00025ab014730_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab014730 Zm00025ab014730_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab014760 Zm00025ab014760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab014760 Zm00025ab014760_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab014870 Zm00025ab014870_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab014930 Zm00025ab014930_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab014930 Zm00025ab014930_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab014940 Zm00025ab014940_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab015060 Zm00025ab015060_P001 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab015070 Zm00025ab015070_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab015070 Zm00025ab015070_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab015070 Zm00025ab015070_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab015070 Zm00025ab015070_P004 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab015070 Zm00025ab015070_P005 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab015320 Zm00025ab015320_P003 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab015380 Zm00025ab015380_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab015480 Zm00025ab015480_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab015480 Zm00025ab015480_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab015490 Zm00025ab015490_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab015490 Zm00025ab015490_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab015510 Zm00025ab015510_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab015510 Zm00025ab015510_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab015510 Zm00025ab015510_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab015510 Zm00025ab015510_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab015510 Zm00025ab015510_P005 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00025ab015900 Zm00025ab015900_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00025ab015900 Zm00025ab015900_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00025ab015900 Zm00025ab015900_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00025ab015900 Zm00025ab015900_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab015970 Zm00025ab015970_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab015970 Zm00025ab015970_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab015970 Zm00025ab015970_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab015970 Zm00025ab015970_P004 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00025ab016010 Zm00025ab016010_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab016040 Zm00025ab016040_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab016210 Zm00025ab016210_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab016210 Zm00025ab016210_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab016210 Zm00025ab016210_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab016210 Zm00025ab016210_P004 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab016210 Zm00025ab016210_P005 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab016450 Zm00025ab016450_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P004 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab016690 Zm00025ab016690_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00025ab016750 Zm00025ab016750_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab016790 Zm00025ab016790_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab016790 Zm00025ab016790_P002 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab016800 Zm00025ab016800_P003 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab016870 Zm00025ab016870_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab016870 Zm00025ab016870_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P004 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P005 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab016900 Zm00025ab016900_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab017240 Zm00025ab017240_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab017240 Zm00025ab017240_P001 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab017290 Zm00025ab017290_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00025ab017300 Zm00025ab017300_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab017300 Zm00025ab017300_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab017300 Zm00025ab017300_P001 NA DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab017310 Zm00025ab017310_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab017310 Zm00025ab017310_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab017330 Zm00025ab017330_P001 expected PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab017820 Zm00025ab017820_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab017820 Zm00025ab017820_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab017830 Zm00025ab017830_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab017830 Zm00025ab017830_P004 conditional PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00025ab017910 Zm00025ab017910_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00025ab017910 Zm00025ab017910_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab017930 Zm00025ab017930_P003 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab017950 Zm00025ab017950_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab017950 Zm00025ab017950_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab017970 Zm00025ab017970_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab017970 Zm00025ab017970_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab017970 Zm00025ab017970_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab017970 Zm00025ab017970_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab018120 Zm00025ab018120_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab018220 Zm00025ab018220_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab018220 Zm00025ab018220_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00025ab018260 Zm00025ab018260_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00025ab018260 Zm00025ab018260_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018380 Zm00025ab018380_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab018390 Zm00025ab018390_P004 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab018540 Zm00025ab018540_P004 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab018550 Zm00025ab018550_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab018550 Zm00025ab018550_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab018550 Zm00025ab018550_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab018580 Zm00025ab018580_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab018580 Zm00025ab018580_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab018580 Zm00025ab018580_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab019040 Zm00025ab019040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019040 Zm00025ab019040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019040 Zm00025ab019040_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab019050 Zm00025ab019050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019050 Zm00025ab019050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019050 Zm00025ab019050_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab019060 Zm00025ab019060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019060 Zm00025ab019060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019060 Zm00025ab019060_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab019070 Zm00025ab019070_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019070 Zm00025ab019070_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab019070 Zm00025ab019070_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab019240 Zm00025ab019240_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P005 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab019330 Zm00025ab019330_P005 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab019400 Zm00025ab019400_P001 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab019400 Zm00025ab019400_P002 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab019400 Zm00025ab019400_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab019400 Zm00025ab019400_P003 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab019400 Zm00025ab019400_P004 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab019400 Zm00025ab019400_P004 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab019500 Zm00025ab019500_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab019590 Zm00025ab019590_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab019590 Zm00025ab019590_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab019590 Zm00025ab019590_P001 conditional PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab019670 Zm00025ab019670_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab019710 Zm00025ab019710_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab019710 Zm00025ab019710_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab019780 Zm00025ab019780_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab019900 Zm00025ab019900_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P009 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P010 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P010 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab019980 Zm00025ab019980_P010 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab020050 Zm00025ab020050_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab020070 Zm00025ab020070_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab020070 Zm00025ab020070_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab020070 Zm00025ab020070_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab020230 Zm00025ab020230_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab020310 Zm00025ab020310_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab020310 Zm00025ab020310_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab020310 Zm00025ab020310_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab020310 Zm00025ab020310_P004 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab020830 Zm00025ab020830_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab020830 Zm00025ab020830_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab020830 Zm00025ab020830_P003 viridiplantae PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00025ab020890 Zm00025ab020890_P001 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab020990 Zm00025ab020990_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab020990 Zm00025ab020990_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab020990 Zm00025ab020990_P003 expected PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab021030 Zm00025ab021030_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab021030 Zm00025ab021030_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab021050 Zm00025ab021050_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab021050 Zm00025ab021050_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab021050 Zm00025ab021050_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab021050 Zm00025ab021050_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab021050 Zm00025ab021050_P005 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00025ab021190 Zm00025ab021190_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab021240 Zm00025ab021240_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab021240 Zm00025ab021240_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab021240 Zm00025ab021240_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab021240 Zm00025ab021240_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab021240 Zm00025ab021240_P005 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab021340 Zm00025ab021340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab021340 Zm00025ab021340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab021340 Zm00025ab021340_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab021340 Zm00025ab021340_P004 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00025ab021640 Zm00025ab021640_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab021740 Zm00025ab021740_P003 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00025ab021920 Zm00025ab021920_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00025ab021920 Zm00025ab021920_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00025ab021920 Zm00025ab021920_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00025ab021920 Zm00025ab021920_P001 ubiquitous PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab022070 Zm00025ab022070_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab022070 Zm00025ab022070_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab022070 Zm00025ab022070_P001 conditional PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00025ab022110 Zm00025ab022110_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00025ab022110 Zm00025ab022110_P001 NA PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00025ab022110 Zm00025ab022110_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00025ab022110 Zm00025ab022110_P002 NA PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00025ab022160 Zm00025ab022160_P001 expected PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00025ab022160 Zm00025ab022160_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022370 Zm00025ab022370_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022370 Zm00025ab022370_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022370 Zm00025ab022370_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab022390 Zm00025ab022390_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022450 Zm00025ab022450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022450 Zm00025ab022450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022450 Zm00025ab022450_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022470 Zm00025ab022470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022470 Zm00025ab022470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022470 Zm00025ab022470_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022480 Zm00025ab022480_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022500 Zm00025ab022500_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022500 Zm00025ab022500_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022500 Zm00025ab022500_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022510 Zm00025ab022510_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022510 Zm00025ab022510_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022510 Zm00025ab022510_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022520 Zm00025ab022520_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022520 Zm00025ab022520_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022520 Zm00025ab022520_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022530 Zm00025ab022530_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022530 Zm00025ab022530_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022530 Zm00025ab022530_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022550 Zm00025ab022550_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022560 Zm00025ab022560_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022560 Zm00025ab022560_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022560 Zm00025ab022560_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab022580 Zm00025ab022580_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab022580 Zm00025ab022580_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab022580 Zm00025ab022580_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab022600 Zm00025ab022600_P001 expected PWY-7861 L-pipecolate biosynthesis RXN-8166 EC-1.5.1.1 Zm00025ab022690 Zm00025ab022690_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab022840 Zm00025ab022840_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab022840 Zm00025ab022840_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab022840 Zm00025ab022840_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab022840 Zm00025ab022840_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab022870 Zm00025ab022870_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab022870 Zm00025ab022870_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab022870 Zm00025ab022870_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab022910 Zm00025ab022910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab022910 Zm00025ab022910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab022910 Zm00025ab022910_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab023140 Zm00025ab023140_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab023320 Zm00025ab023320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab023320 Zm00025ab023320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab023320 Zm00025ab023320_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab023330 Zm00025ab023330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab023330 Zm00025ab023330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab023330 Zm00025ab023330_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab023370 Zm00025ab023370_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab023380 Zm00025ab023380_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab023380 Zm00025ab023380_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab023400 Zm00025ab023400_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab023400 Zm00025ab023400_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab023400 Zm00025ab023400_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab023420 Zm00025ab023420_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab023540 Zm00025ab023540_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab023730 Zm00025ab023730_P004 conditional VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab023780 Zm00025ab023780_P004 viridiplantae PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab023860 Zm00025ab023860_P002 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab023940 Zm00025ab023940_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab023940 Zm00025ab023940_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab023940 Zm00025ab023940_P003 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab023990 Zm00025ab023990_P003 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab024580 Zm00025ab024580_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab024580 Zm00025ab024580_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab024580 Zm00025ab024580_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab024600 Zm00025ab024600_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab024600 Zm00025ab024600_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab024680 Zm00025ab024680_P003 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab024850 Zm00025ab024850_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab024850 Zm00025ab024850_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab024850 Zm00025ab024850_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab024850 Zm00025ab024850_P002 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab024890 Zm00025ab024890_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab024890 Zm00025ab024890_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab025010 Zm00025ab025010_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab025020 Zm00025ab025020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab025020 Zm00025ab025020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab025020 Zm00025ab025020_P001 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P004 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab025170 Zm00025ab025170_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab025600 Zm00025ab025600_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab025600 Zm00025ab025600_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab025600 Zm00025ab025600_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab025650 Zm00025ab025650_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab025650 Zm00025ab025650_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab025820 Zm00025ab025820_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab025840 Zm00025ab025840_P001 expected PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab025960 Zm00025ab025960_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab025960 Zm00025ab025960_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab025960 Zm00025ab025960_P001 ubiquitous DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab026010 Zm00025ab026010_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab026010 Zm00025ab026010_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab026030 Zm00025ab026030_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab026170 Zm00025ab026170_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab026170 Zm00025ab026170_P002 ubiquitous PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab026200 Zm00025ab026200_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab026200 Zm00025ab026200_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab026200 Zm00025ab026200_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab026200 Zm00025ab026200_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab026310 Zm00025ab026310_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab026310 Zm00025ab026310_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab026310 Zm00025ab026310_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab026310 Zm00025ab026310_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab026460 Zm00025ab026460_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab026460 Zm00025ab026460_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab026460 Zm00025ab026460_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab026460 Zm00025ab026460_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab026460 Zm00025ab026460_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab026460 Zm00025ab026460_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026480 Zm00025ab026480_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab026570 Zm00025ab026570_P002 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00025ab026640 Zm00025ab026640_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00025ab026640 Zm00025ab026640_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00025ab026640 Zm00025ab026640_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab026670 Zm00025ab026670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026670 Zm00025ab026670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab026670 Zm00025ab026670_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab026860 Zm00025ab026860_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab026860 Zm00025ab026860_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab027000 Zm00025ab027000_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab027000 Zm00025ab027000_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab027000 Zm00025ab027000_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab027030 Zm00025ab027030_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab027030 Zm00025ab027030_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab027030 Zm00025ab027030_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab027080 Zm00025ab027080_P001 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00025ab027140 Zm00025ab027140_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00025ab027140 Zm00025ab027140_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00025ab027160 Zm00025ab027160_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00025ab027160 Zm00025ab027160_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00025ab027170 Zm00025ab027170_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00025ab027170 Zm00025ab027170_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab027610 Zm00025ab027610_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab027690 Zm00025ab027690_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027750 Zm00025ab027750_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab027760 Zm00025ab027760_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab027960 Zm00025ab027960_P003 conditional PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab028110 Zm00025ab028110_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab028110 Zm00025ab028110_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab028110 Zm00025ab028110_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab028110 Zm00025ab028110_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab028110 Zm00025ab028110_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab028110 Zm00025ab028110_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab028110 Zm00025ab028110_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab028110 Zm00025ab028110_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab028240 Zm00025ab028240_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab028240 Zm00025ab028240_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab028450 Zm00025ab028450_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab028540 Zm00025ab028540_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab028540 Zm00025ab028540_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab028700 Zm00025ab028700_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab028810 Zm00025ab028810_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab028810 Zm00025ab028810_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab028880 Zm00025ab028880_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab028880 Zm00025ab028880_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab028880 Zm00025ab028880_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab028880 Zm00025ab028880_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab028990 Zm00025ab028990_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab028990 Zm00025ab028990_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P001 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00025ab029090 Zm00025ab029090_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P002 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00025ab029090 Zm00025ab029090_P002 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P003 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P003 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00025ab029090 Zm00025ab029090_P003 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P004 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00025ab029090 Zm00025ab029090_P004 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00025ab029090 Zm00025ab029090_P004 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00025ab029130 Zm00025ab029130_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00025ab029130 Zm00025ab029130_P001 conditional PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00025ab029170 Zm00025ab029170_P001 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00025ab029170 Zm00025ab029170_P001 expected PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00025ab029170 Zm00025ab029170_P002 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00025ab029170 Zm00025ab029170_P002 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab029270 Zm00025ab029270_P003 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab029280 Zm00025ab029280_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab029290 Zm00025ab029290_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab029290 Zm00025ab029290_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P002 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab029570 Zm00025ab029570_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab029600 Zm00025ab029600_P001 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab029950 Zm00025ab029950_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab029950 Zm00025ab029950_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab029950 Zm00025ab029950_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab029950 Zm00025ab029950_P004 viridiplantae PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab030190 Zm00025ab030190_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab030190 Zm00025ab030190_P002 ubiquitous PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P006 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab030220 Zm00025ab030220_P007 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab030280 Zm00025ab030280_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab030310 Zm00025ab030310_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab030460 Zm00025ab030460_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab030480 Zm00025ab030480_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab030480 Zm00025ab030480_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab030480 Zm00025ab030480_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab030490 Zm00025ab030490_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab030530 Zm00025ab030530_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab030640 Zm00025ab030640_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab030640 Zm00025ab030640_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab030640 Zm00025ab030640_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab030740 Zm00025ab030740_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab030830 Zm00025ab030830_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab030830 Zm00025ab030830_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab030830 Zm00025ab030830_P003 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab030830 Zm00025ab030830_P004 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab030880 Zm00025ab030880_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab030880 Zm00025ab030880_P002 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab030900 Zm00025ab030900_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab030900 Zm00025ab030900_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab031090 Zm00025ab031090_P001 expected PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab031480 Zm00025ab031480_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab031480 Zm00025ab031480_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab031620 Zm00025ab031620_P003 excluded MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5464 EC-2.4.1.131 Zm00025ab031680 Zm00025ab031680_P001 viridiplantae PWY-7463 N-methylanthraniloyl-β-D-glucopyranose biosynthesis ANTHRANILATE-N-METHYLTRANSFERASE-RXN EC-2.1.1.111 Zm00025ab031740 Zm00025ab031740_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab031750 Zm00025ab031750_P003 ubiquitous PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab032030 Zm00025ab032030_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab032030 Zm00025ab032030_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab032050 Zm00025ab032050_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab032060 Zm00025ab032060_P001 viridiplantae PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00025ab032330 Zm00025ab032330_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00025ab032330 Zm00025ab032330_P002 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00025ab032330 Zm00025ab032330_P003 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00025ab032330 Zm00025ab032330_P004 conditional NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00025ab032400 Zm00025ab032400_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00025ab032400 Zm00025ab032400_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00025ab032400 Zm00025ab032400_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00025ab032440 Zm00025ab032440_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00025ab032440 Zm00025ab032440_P001 expected PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00025ab032540 Zm00025ab032540_P001 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00025ab032540 Zm00025ab032540_P002 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00025ab032540 Zm00025ab032540_P003 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab032600 Zm00025ab032600_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab032600 Zm00025ab032600_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab032610 Zm00025ab032610_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab032610 Zm00025ab032610_P001 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab032620 Zm00025ab032620_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab032620 Zm00025ab032620_P001 expected LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab032890 Zm00025ab032890_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab032890 Zm00025ab032890_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab032980 Zm00025ab032980_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab032980 Zm00025ab032980_P002 ubiquitous PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab033020 Zm00025ab033020_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab033020 Zm00025ab033020_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab033020 Zm00025ab033020_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab033190 Zm00025ab033190_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab033190 Zm00025ab033190_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab033190 Zm00025ab033190_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab033190 Zm00025ab033190_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab033320 Zm00025ab033320_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab033320 Zm00025ab033320_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00025ab033360 Zm00025ab033360_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab033420 Zm00025ab033420_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab033420 Zm00025ab033420_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00025ab033420 Zm00025ab033420_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab033470 Zm00025ab033470_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab033470 Zm00025ab033470_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab033520 Zm00025ab033520_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab033670 Zm00025ab033670_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab033670 Zm00025ab033670_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab033670 Zm00025ab033670_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab033670 Zm00025ab033670_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab033670 Zm00025ab033670_P005 NA PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab034020 Zm00025ab034020_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab034050 Zm00025ab034050_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P004 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P005 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P006 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P006 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P007 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab034100 Zm00025ab034100_P007 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab034140 Zm00025ab034140_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00025ab034210 Zm00025ab034210_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00025ab034210 Zm00025ab034210_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab034520 Zm00025ab034520_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab034600 Zm00025ab034600_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab034600 Zm00025ab034600_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab034760 Zm00025ab034760_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab034760 Zm00025ab034760_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab034760 Zm00025ab034760_P003 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab034760 Zm00025ab034760_P004 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab034760 Zm00025ab034760_P005 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab034790 Zm00025ab034790_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab034960 Zm00025ab034960_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab034960 Zm00025ab034960_P001 NA PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab035250 Zm00025ab035250_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab035320 Zm00025ab035320_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab035320 Zm00025ab035320_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab035320 Zm00025ab035320_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab035320 Zm00025ab035320_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P002 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P003 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab035470 Zm00025ab035470_P003 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab036160 Zm00025ab036160_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P001 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00025ab036160 Zm00025ab036160_P001 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab036160 Zm00025ab036160_P002 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P002 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P002 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00025ab036160 Zm00025ab036160_P002 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab036160 Zm00025ab036160_P003 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P003 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P003 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00025ab036160 Zm00025ab036160_P003 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P004 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab036160 Zm00025ab036160_P004 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P004 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P004 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00025ab036160 Zm00025ab036160_P004 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P005 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab036160 Zm00025ab036160_P005 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab036160 Zm00025ab036160_P005 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P005 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P005 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036160 Zm00025ab036160_P005 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00025ab036160 Zm00025ab036160_P005 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab036210 Zm00025ab036210_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab036210 Zm00025ab036210_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab036210 Zm00025ab036210_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab036210 Zm00025ab036210_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036260 Zm00025ab036260_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036260 Zm00025ab036260_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00025ab036260 Zm00025ab036260_P001 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab036320 Zm00025ab036320_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab036320 Zm00025ab036320_P002 conditional PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab036520 Zm00025ab036520_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab036750 Zm00025ab036750_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab036810 Zm00025ab036810_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab036810 Zm00025ab036810_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab036810 Zm00025ab036810_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab036910 Zm00025ab036910_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab037030 Zm00025ab037030_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab037030 Zm00025ab037030_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab037030 Zm00025ab037030_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab037110 Zm00025ab037110_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab037110 Zm00025ab037110_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab037110 Zm00025ab037110_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab037110 Zm00025ab037110_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab037190 Zm00025ab037190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab037420 Zm00025ab037420_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab037700 Zm00025ab037700_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab037710 Zm00025ab037710_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab037870 Zm00025ab037870_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab038010 Zm00025ab038010_P001 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab038060 Zm00025ab038060_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab038060 Zm00025ab038060_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab038060 Zm00025ab038060_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab038060 Zm00025ab038060_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab038090 Zm00025ab038090_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab038090 Zm00025ab038090_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab038090 Zm00025ab038090_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab038090 Zm00025ab038090_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab038090 Zm00025ab038090_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab038090 Zm00025ab038090_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab038090 Zm00025ab038090_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab038090 Zm00025ab038090_P002 expected PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00025ab038150 Zm00025ab038150_P001 viridiplantae PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00025ab038150 Zm00025ab038150_P002 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab038190 Zm00025ab038190_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab038190 Zm00025ab038190_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab038190 Zm00025ab038190_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab038190 Zm00025ab038190_P004 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab038190 Zm00025ab038190_P005 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab038240 Zm00025ab038240_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P006 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P007 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P008 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab038430 Zm00025ab038430_P009 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab038460 Zm00025ab038460_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab038460 Zm00025ab038460_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab038460 Zm00025ab038460_P003 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab038470 Zm00025ab038470_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab038470 Zm00025ab038470_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab038470 Zm00025ab038470_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab038700 Zm00025ab038700_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab038800 Zm00025ab038800_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab038800 Zm00025ab038800_P001 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab038800 Zm00025ab038800_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab038800 Zm00025ab038800_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab038890 Zm00025ab038890_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab038940 Zm00025ab038940_P001 excluded PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00025ab038950 Zm00025ab038950_P002 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab039090 Zm00025ab039090_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab039090 Zm00025ab039090_P002 expected PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab039190 Zm00025ab039190_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab039210 Zm00025ab039210_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab039270 Zm00025ab039270_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab039270 Zm00025ab039270_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab039290 Zm00025ab039290_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab039290 Zm00025ab039290_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab039290 Zm00025ab039290_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab039290 Zm00025ab039290_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab039300 Zm00025ab039300_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab039300 Zm00025ab039300_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab039300 Zm00025ab039300_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab039300 Zm00025ab039300_P001 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab039600 Zm00025ab039600_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab039600 Zm00025ab039600_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab039600 Zm00025ab039600_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab039600 Zm00025ab039600_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab039610 Zm00025ab039610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab039610 Zm00025ab039610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab039610 Zm00025ab039610_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab039620 Zm00025ab039620_P003 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab039660 Zm00025ab039660_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab039660 Zm00025ab039660_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab039660 Zm00025ab039660_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab039660 Zm00025ab039660_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab039680 Zm00025ab039680_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039680 Zm00025ab039680_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab039680 Zm00025ab039680_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039680 Zm00025ab039680_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab039690 Zm00025ab039690_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039690 Zm00025ab039690_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab039690 Zm00025ab039690_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039690 Zm00025ab039690_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab039700 Zm00025ab039700_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039700 Zm00025ab039700_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab039700 Zm00025ab039700_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039700 Zm00025ab039700_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab039710 Zm00025ab039710_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039710 Zm00025ab039710_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab039710 Zm00025ab039710_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab039710 Zm00025ab039710_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab039830 Zm00025ab039830_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab039940 Zm00025ab039940_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab039940 Zm00025ab039940_P003 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00025ab039980 Zm00025ab039980_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab040010 Zm00025ab040010_P001 NA PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00025ab040020 Zm00025ab040020_P001 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00025ab040020 Zm00025ab040020_P002 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab040240 Zm00025ab040240_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab040270 Zm00025ab040270_P001 NA PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab040300 Zm00025ab040300_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab040300 Zm00025ab040300_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab040320 Zm00025ab040320_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab040320 Zm00025ab040320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab040320 Zm00025ab040320_P001 manual PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00025ab040320 Zm00025ab040320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00025ab040320 Zm00025ab040320_P001 manual PWY-7048 malate-oxaloacetate shuttle II MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00025ab040320 Zm00025ab040320_P001 NA DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab040410 Zm00025ab040410_P004 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab040480 Zm00025ab040480_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab040480 Zm00025ab040480_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab040490 Zm00025ab040490_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab040490 Zm00025ab040490_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab040550 Zm00025ab040550_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab040550 Zm00025ab040550_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab040550 Zm00025ab040550_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab040550 Zm00025ab040550_P001 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab040580 Zm00025ab040580_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab040580 Zm00025ab040580_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab040580 Zm00025ab040580_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab040580 Zm00025ab040580_P002 viridiplantae PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00025ab040630 Zm00025ab040630_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00025ab040630 Zm00025ab040630_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P002 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P002 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00025ab040750 Zm00025ab040750_P002 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab040760 Zm00025ab040760_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab040760 Zm00025ab040760_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab040760 Zm00025ab040760_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab040760 Zm00025ab040760_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab040780 Zm00025ab040780_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab040780 Zm00025ab040780_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab040820 Zm00025ab040820_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab040820 Zm00025ab040820_P001 viridiplantae PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00025ab040870 Zm00025ab040870_P001 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab040930 Zm00025ab040930_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab040930 Zm00025ab040930_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab040930 Zm00025ab040930_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab040930 Zm00025ab040930_P002 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab041030 Zm00025ab041030_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab041030 Zm00025ab041030_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab041030 Zm00025ab041030_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00025ab041030 Zm00025ab041030_P002 NA PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab041120 Zm00025ab041120_P001 ubiquitous PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00025ab041320 Zm00025ab041320_P001 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00025ab041470 Zm00025ab041470_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab041480 Zm00025ab041480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab041480 Zm00025ab041480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab041480 Zm00025ab041480_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab041500 Zm00025ab041500_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab041500 Zm00025ab041500_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab041530 Zm00025ab041530_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab041530 Zm00025ab041530_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab041570 Zm00025ab041570_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab041840 Zm00025ab041840_P001 expected PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00025ab041930 Zm00025ab041930_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab041960 Zm00025ab041960_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab042080 Zm00025ab042080_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab042230 Zm00025ab042230_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab042290 Zm00025ab042290_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab042290 Zm00025ab042290_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab042290 Zm00025ab042290_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab042290 Zm00025ab042290_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab042330 Zm00025ab042330_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab042470 Zm00025ab042470_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab042530 Zm00025ab042530_P001 conditional PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P001 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P001 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P001 NA PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P002 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P002 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00025ab042570 Zm00025ab042570_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab042610 Zm00025ab042610_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab042610 Zm00025ab042610_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab042610 Zm00025ab042610_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab042610 Zm00025ab042610_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab042670 Zm00025ab042670_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab042680 Zm00025ab042680_P001 expected PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab042780 Zm00025ab042780_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P005 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab042830 Zm00025ab042830_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab042830 Zm00025ab042830_P006 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab042830 Zm00025ab042830_P006 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab042830 Zm00025ab042830_P007 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab042830 Zm00025ab042830_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab042840 Zm00025ab042840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab042840 Zm00025ab042840_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab042860 Zm00025ab042860_P003 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab043180 Zm00025ab043180_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab043200 Zm00025ab043200_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab043200 Zm00025ab043200_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab043200 Zm00025ab043200_P003 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab043250 Zm00025ab043250_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab043250 Zm00025ab043250_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab043250 Zm00025ab043250_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab043250 Zm00025ab043250_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab043350 Zm00025ab043350_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab043350 Zm00025ab043350_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab043500 Zm00025ab043500_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab043500 Zm00025ab043500_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab043900 Zm00025ab043900_P001 expected PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00025ab043930 Zm00025ab043930_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab043940 Zm00025ab043940_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab044010 Zm00025ab044010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab044010 Zm00025ab044010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab044010 Zm00025ab044010_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab044010 Zm00025ab044010_P002 expected PWY-5975 furaneol and mesifurane biosynthesis RXN-9563 EC-1.3.1.105 Zm00025ab044200 Zm00025ab044200_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab044350 Zm00025ab044350_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab044350 Zm00025ab044350_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab044350 Zm00025ab044350_P003 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P004 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P005 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P005 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab044370 Zm00025ab044370_P005 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab044690 Zm00025ab044690_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab044690 Zm00025ab044690_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab044690 Zm00025ab044690_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab044690 Zm00025ab044690_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab044740 Zm00025ab044740_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab044750 Zm00025ab044750_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab044750 Zm00025ab044750_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab044760 Zm00025ab044760_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044880 Zm00025ab044880_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab044890 Zm00025ab044890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044890 Zm00025ab044890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab044890 Zm00025ab044890_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P004 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P005 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab045270 Zm00025ab045270_P005 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab045570 Zm00025ab045570_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab045570 Zm00025ab045570_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab045900 Zm00025ab045900_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab045900 Zm00025ab045900_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab045900 Zm00025ab045900_P003 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab046060 Zm00025ab046060_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab046060 Zm00025ab046060_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab046060 Zm00025ab046060_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00025ab046090 Zm00025ab046090_P002 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab046130 Zm00025ab046130_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab046190 Zm00025ab046190_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab046190 Zm00025ab046190_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab046190 Zm00025ab046190_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab046190 Zm00025ab046190_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab046450 Zm00025ab046450_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab046500 Zm00025ab046500_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab046500 Zm00025ab046500_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab046500 Zm00025ab046500_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P003 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P004 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P004 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P004 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P005 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P005 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab046610 Zm00025ab046610_P005 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab046710 Zm00025ab046710_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab046710 Zm00025ab046710_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab046730 Zm00025ab046730_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab046730 Zm00025ab046730_P002 expected PWY-7212 baicalein metabolism RXN-11755 EC-2.4.1.253 Zm00025ab046790 Zm00025ab046790_P001 conditional PWY-7213 wogonin metabolism RXN-14060 EC-2.4.1.253 Zm00025ab046790 Zm00025ab046790_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab047260 Zm00025ab047260_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab047620 Zm00025ab047620_P002 NA PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P005 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P006 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P006 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P006 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P006 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P007 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P007 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P007 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab047670 Zm00025ab047670_P007 ubiquitous PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab047700 Zm00025ab047700_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab047700 Zm00025ab047700_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab047700 Zm00025ab047700_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab047700 Zm00025ab047700_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00025ab047870 Zm00025ab047870_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00025ab047870 Zm00025ab047870_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00025ab047900 Zm00025ab047900_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab047970 Zm00025ab047970_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab047970 Zm00025ab047970_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab047970 Zm00025ab047970_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab048320 Zm00025ab048320_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab048610 Zm00025ab048610_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab048680 Zm00025ab048680_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab048980 Zm00025ab048980_P003 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00025ab049020 Zm00025ab049020_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab049040 Zm00025ab049040_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab049040 Zm00025ab049040_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P003 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab049060 Zm00025ab049060_P004 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab049390 Zm00025ab049390_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab049390 Zm00025ab049390_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab049390 Zm00025ab049390_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab049390 Zm00025ab049390_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab049440 Zm00025ab049440_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab049440 Zm00025ab049440_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab049440 Zm00025ab049440_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab049560 Zm00025ab049560_P001 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab049590 Zm00025ab049590_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab049720 Zm00025ab049720_P001 ubiquitous PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00025ab049730 Zm00025ab049730_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00025ab049730 Zm00025ab049730_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab049900 Zm00025ab049900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab049900 Zm00025ab049900_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab049910 Zm00025ab049910_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab049910 Zm00025ab049910_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab049920 Zm00025ab049920_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab049920 Zm00025ab049920_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab049940 Zm00025ab049940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab049940 Zm00025ab049940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab049940 Zm00025ab049940_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00025ab049960 Zm00025ab049960_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00025ab049960 Zm00025ab049960_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00025ab049960 Zm00025ab049960_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00025ab049960 Zm00025ab049960_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab049990 Zm00025ab049990_P001 viridiplantae PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P002 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P002 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P002 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P003 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P003 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab050010 Zm00025ab050010_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab050080 Zm00025ab050080_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab050130 Zm00025ab050130_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab050130 Zm00025ab050130_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab050130 Zm00025ab050130_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab050130 Zm00025ab050130_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab050230 Zm00025ab050230_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab050230 Zm00025ab050230_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab050230 Zm00025ab050230_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab050230 Zm00025ab050230_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab050250 Zm00025ab050250_P006 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab050330 Zm00025ab050330_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab050330 Zm00025ab050330_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab050330 Zm00025ab050330_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab050370 Zm00025ab050370_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab050370 Zm00025ab050370_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab050500 Zm00025ab050500_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab050500 Zm00025ab050500_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab050540 Zm00025ab050540_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab050540 Zm00025ab050540_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab050550 Zm00025ab050550_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab050550 Zm00025ab050550_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab050670 Zm00025ab050670_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab050780 Zm00025ab050780_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab050780 Zm00025ab050780_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab051230 Zm00025ab051230_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab051230 Zm00025ab051230_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab051230 Zm00025ab051230_P001 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P002 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab051290 Zm00025ab051290_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab051350 Zm00025ab051350_P001 viridiplantae PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab051860 Zm00025ab051860_P001 ubiquitous PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab051970 Zm00025ab051970_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab052020 Zm00025ab052020_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab052030 Zm00025ab052030_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab052030 Zm00025ab052030_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab052030 Zm00025ab052030_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab052030 Zm00025ab052030_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab052030 Zm00025ab052030_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab052060 Zm00025ab052060_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab052060 Zm00025ab052060_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab052350 Zm00025ab052350_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab052380 Zm00025ab052380_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab052380 Zm00025ab052380_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab052380 Zm00025ab052380_P003 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00025ab052420 Zm00025ab052420_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab052430 Zm00025ab052430_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab052430 Zm00025ab052430_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab052430 Zm00025ab052430_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab052440 Zm00025ab052440_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab052440 Zm00025ab052440_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab052440 Zm00025ab052440_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab052660 Zm00025ab052660_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab052660 Zm00025ab052660_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab052660 Zm00025ab052660_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab052660 Zm00025ab052660_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab052670 Zm00025ab052670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab052670 Zm00025ab052670_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab052670 Zm00025ab052670_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab052670 Zm00025ab052670_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab052910 Zm00025ab052910_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab052960 Zm00025ab052960_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab053250 Zm00025ab053250_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab053250 Zm00025ab053250_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab053250 Zm00025ab053250_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab053250 Zm00025ab053250_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00025ab053260 Zm00025ab053260_P004 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab053590 Zm00025ab053590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab053590 Zm00025ab053590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab053590 Zm00025ab053590_P001 conditional PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00025ab053670 Zm00025ab053670_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00025ab053670 Zm00025ab053670_P002 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00025ab053670 Zm00025ab053670_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab053690 Zm00025ab053690_P001 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab053850 Zm00025ab053850_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab053880 Zm00025ab053880_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab053880 Zm00025ab053880_P001 viridiplantae PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DUTP-PYROP-RXN EC-3.6.1.23 Zm00025ab053980 Zm00025ab053980_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DUTP-PYROP-RXN EC-3.6.1.23 Zm00025ab053980 Zm00025ab053980_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DUTP-PYROP-RXN EC-3.6.1.23 Zm00025ab053980 Zm00025ab053980_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DUTP-PYROP-RXN EC-3.6.1.23 Zm00025ab053980 Zm00025ab053980_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab054020 Zm00025ab054020_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab054020 Zm00025ab054020_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab054340 Zm00025ab054340_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P004 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P005 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab054450 Zm00025ab054450_P005 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab054540 Zm00025ab054540_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab054540 Zm00025ab054540_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab054540 Zm00025ab054540_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab054580 Zm00025ab054580_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab054580 Zm00025ab054580_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab054590 Zm00025ab054590_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab054590 Zm00025ab054590_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab054610 Zm00025ab054610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab054610 Zm00025ab054610_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab054610 Zm00025ab054610_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab054610 Zm00025ab054610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab054610 Zm00025ab054610_P001 viridiplantae PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00025ab054730 Zm00025ab054730_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00025ab054730 Zm00025ab054730_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00025ab054730 Zm00025ab054730_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00025ab054730 Zm00025ab054730_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00025ab054740 Zm00025ab054740_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab054920 Zm00025ab054920_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00025ab055000 Zm00025ab055000_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00025ab055000 Zm00025ab055000_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00025ab055000 Zm00025ab055000_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00025ab055000 Zm00025ab055000_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab055060 Zm00025ab055060_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab055060 Zm00025ab055060_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab055060 Zm00025ab055060_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab055060 Zm00025ab055060_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab055060 Zm00025ab055060_P005 expected GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00025ab055130 Zm00025ab055130_P001 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P001 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P001 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P002 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P002 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P003 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00025ab055240 Zm00025ab055240_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab055480 Zm00025ab055480_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab055480 Zm00025ab055480_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab055480 Zm00025ab055480_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab055560 Zm00025ab055560_P001 NA PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab055570 Zm00025ab055570_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab055570 Zm00025ab055570_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab055570 Zm00025ab055570_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab055570 Zm00025ab055570_P002 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00025ab055580 Zm00025ab055580_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055610 Zm00025ab055610_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055630 Zm00025ab055630_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055630 Zm00025ab055630_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055630 Zm00025ab055630_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055660 Zm00025ab055660_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055660 Zm00025ab055660_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055660 Zm00025ab055660_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab055670 Zm00025ab055670_P003 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab055700 Zm00025ab055700_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab055750 Zm00025ab055750_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab055750 Zm00025ab055750_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab055750 Zm00025ab055750_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab055810 Zm00025ab055810_P005 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab055850 Zm00025ab055850_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab055850 Zm00025ab055850_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab055880 Zm00025ab055880_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab055890 Zm00025ab055890_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab055890 Zm00025ab055890_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab056030 Zm00025ab056030_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab056110 Zm00025ab056110_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab056110 Zm00025ab056110_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab056110 Zm00025ab056110_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab056110 Zm00025ab056110_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab056110 Zm00025ab056110_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab056110 Zm00025ab056110_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab056110 Zm00025ab056110_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab056110 Zm00025ab056110_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab056120 Zm00025ab056120_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab056120 Zm00025ab056120_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab056120 Zm00025ab056120_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab056120 Zm00025ab056120_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab056150 Zm00025ab056150_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab056150 Zm00025ab056150_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab056150 Zm00025ab056150_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab056150 Zm00025ab056150_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab056260 Zm00025ab056260_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab056480 Zm00025ab056480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab056480 Zm00025ab056480_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab056480 Zm00025ab056480_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab056560 Zm00025ab056560_P001 conditional PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab056580 Zm00025ab056580_P002 NA PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab056610 Zm00025ab056610_P001 ubiquitous PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab056740 Zm00025ab056740_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab056740 Zm00025ab056740_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab056740 Zm00025ab056740_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab056740 Zm00025ab056740_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab056860 Zm00025ab056860_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab056950 Zm00025ab056950_P001 viridiplantae PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab057000 Zm00025ab057000_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab057010 Zm00025ab057010_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab057040 Zm00025ab057040_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab057040 Zm00025ab057040_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab057040 Zm00025ab057040_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab057370 Zm00025ab057370_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab057370 Zm00025ab057370_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab057370 Zm00025ab057370_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab057370 Zm00025ab057370_P002 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab057380 Zm00025ab057380_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab057380 Zm00025ab057380_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab057380 Zm00025ab057380_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab057380 Zm00025ab057380_P004 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab057380 Zm00025ab057380_P004 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab057470 Zm00025ab057470_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab057470 Zm00025ab057470_P001 NA NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-884 EC-1.17.7.4 Zm00025ab057710 Zm00025ab057710_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-884 EC-1.17.7.4 Zm00025ab057710 Zm00025ab057710_P001 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P005 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab057840 Zm00025ab057840_P006 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab057880 Zm00025ab057880_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab057880 Zm00025ab057880_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab057880 Zm00025ab057880_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab057880 Zm00025ab057880_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab057980 Zm00025ab057980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab057980 Zm00025ab057980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab057980 Zm00025ab057980_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00025ab058020 Zm00025ab058020_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab058030 Zm00025ab058030_P005 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab058070 Zm00025ab058070_P002 excluded PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab058150 Zm00025ab058150_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab058150 Zm00025ab058150_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab058360 Zm00025ab058360_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P002 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P003 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P003 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab058400 Zm00025ab058400_P003 expected PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab058490 Zm00025ab058490_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab058490 Zm00025ab058490_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab058490 Zm00025ab058490_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00025ab058490 Zm00025ab058490_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00025ab058490 Zm00025ab058490_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00025ab058490 Zm00025ab058490_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab058500 Zm00025ab058500_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab058500 Zm00025ab058500_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab058500 Zm00025ab058500_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab058870 Zm00025ab058870_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab058870 Zm00025ab058870_P001 ubiquitous PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab059260 Zm00025ab059260_P001 conditional PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab059290 Zm00025ab059290_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab059300 Zm00025ab059300_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab059330 Zm00025ab059330_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab059330 Zm00025ab059330_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab059330 Zm00025ab059330_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab059330 Zm00025ab059330_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab059330 Zm00025ab059330_P005 expected PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00025ab059370 Zm00025ab059370_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00025ab059370 Zm00025ab059370_P002 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00025ab059370 Zm00025ab059370_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab059570 Zm00025ab059570_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab059570 Zm00025ab059570_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059800 Zm00025ab059800_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab059820 Zm00025ab059820_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab059880 Zm00025ab059880_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab059880 Zm00025ab059880_P001 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab060260 Zm00025ab060260_P001 excluded PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab060330 Zm00025ab060330_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab060330 Zm00025ab060330_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab060360 Zm00025ab060360_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab060360 Zm00025ab060360_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab060570 Zm00025ab060570_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab060570 Zm00025ab060570_P002 conditional PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab060600 Zm00025ab060600_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab060600 Zm00025ab060600_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab060600 Zm00025ab060600_P003 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab060600 Zm00025ab060600_P004 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab060750 Zm00025ab060750_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab060790 Zm00025ab060790_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab060790 Zm00025ab060790_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab060800 Zm00025ab060800_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab060800 Zm00025ab060800_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab060850 Zm00025ab060850_P001 NA PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab060870 Zm00025ab060870_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00025ab060940 Zm00025ab060940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab060950 Zm00025ab060950_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab061000 Zm00025ab061000_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab061090 Zm00025ab061090_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab061140 Zm00025ab061140_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab061140 Zm00025ab061140_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab061140 Zm00025ab061140_P001 manual PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00025ab061320 Zm00025ab061320_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00025ab061320 Zm00025ab061320_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00025ab061320 Zm00025ab061320_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab061350 Zm00025ab061350_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab061350 Zm00025ab061350_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab061350 Zm00025ab061350_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab061350 Zm00025ab061350_P002 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab061440 Zm00025ab061440_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab061440 Zm00025ab061440_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab061440 Zm00025ab061440_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab061440 Zm00025ab061440_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab061490 Zm00025ab061490_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab061490 Zm00025ab061490_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab061550 Zm00025ab061550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab061550 Zm00025ab061550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab061550 Zm00025ab061550_P001 conditional PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00025ab061560 Zm00025ab061560_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab061840 Zm00025ab061840_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab061870 Zm00025ab061870_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab061880 Zm00025ab061880_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab062110 Zm00025ab062110_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab062120 Zm00025ab062120_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab062130 Zm00025ab062130_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P001 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P001 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P001 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P002 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P002 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P002 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P003 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P003 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P003 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P004 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00025ab062140 Zm00025ab062140_P004 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab062140 Zm00025ab062140_P004 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab062310 Zm00025ab062310_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P003 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062380 Zm00025ab062380_P003 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062390 Zm00025ab062390_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062390 Zm00025ab062390_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062410 Zm00025ab062410_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab062410 Zm00025ab062410_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab062680 Zm00025ab062680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab062710 Zm00025ab062710_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00025ab062920 Zm00025ab062920_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00025ab062920 Zm00025ab062920_P002 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00025ab062920 Zm00025ab062920_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab062940 Zm00025ab062940_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P003 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P004 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab062970 Zm00025ab062970_P004 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab063110 Zm00025ab063110_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab063310 Zm00025ab063310_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab063310 Zm00025ab063310_P002 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab063420 Zm00025ab063420_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab063420 Zm00025ab063420_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab063420 Zm00025ab063420_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab063420 Zm00025ab063420_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab063420 Zm00025ab063420_P005 expected PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab063470 Zm00025ab063470_P001 conditional PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab063470 Zm00025ab063470_P002 conditional PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab063470 Zm00025ab063470_P003 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab063580 Zm00025ab063580_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab063680 Zm00025ab063680_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00025ab063740 Zm00025ab063740_P001 viridiplantae PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00025ab063880 Zm00025ab063880_P001 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00025ab063880 Zm00025ab063880_P001 excluded PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab064090 Zm00025ab064090_P003 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab064160 Zm00025ab064160_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab064170 Zm00025ab064170_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab064230 Zm00025ab064230_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab064250 Zm00025ab064250_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00025ab064320 Zm00025ab064320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00025ab064320 Zm00025ab064320_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab064560 Zm00025ab064560_P001 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab064590 Zm00025ab064590_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00025ab064600 Zm00025ab064600_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab064700 Zm00025ab064700_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab064860 Zm00025ab064860_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab064870 Zm00025ab064870_P001 ubiquitous PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00025ab064880 Zm00025ab064880_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab064890 Zm00025ab064890_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab064990 Zm00025ab064990_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab064990 Zm00025ab064990_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab064990 Zm00025ab064990_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab064990 Zm00025ab064990_P004 expected PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab065000 Zm00025ab065000_P001 viridiplantae PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00025ab065060 Zm00025ab065060_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00025ab065060 Zm00025ab065060_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab065080 Zm00025ab065080_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab065080 Zm00025ab065080_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab065080 Zm00025ab065080_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab065080 Zm00025ab065080_P001 NA PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P001 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P001 expected PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P002 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00025ab065090 Zm00025ab065090_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab065190 Zm00025ab065190_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab065470 Zm00025ab065470_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab065470 Zm00025ab065470_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab065520 Zm00025ab065520_P004 expected PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab065610 Zm00025ab065610_P001 ubiquitous PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab065690 Zm00025ab065690_P003 expected PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab065870 Zm00025ab065870_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab065900 Zm00025ab065900_P006 expected PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P002 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P003 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P003 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab066050 Zm00025ab066050_P003 NA PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab066070 Zm00025ab066070_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab066150 Zm00025ab066150_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab066160 Zm00025ab066160_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab066170 Zm00025ab066170_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab066210 Zm00025ab066210_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab066210 Zm00025ab066210_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab066290 Zm00025ab066290_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab066360 Zm00025ab066360_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00025ab066370 Zm00025ab066370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab066410 Zm00025ab066410_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab066440 Zm00025ab066440_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab066440 Zm00025ab066440_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab066440 Zm00025ab066440_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab066440 Zm00025ab066440_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab066460 Zm00025ab066460_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab066460 Zm00025ab066460_P002 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab066550 Zm00025ab066550_P001 viridiplantae PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00025ab066590 Zm00025ab066590_P001 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00025ab066590 Zm00025ab066590_P002 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab066710 Zm00025ab066710_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab066920 Zm00025ab066920_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab066930 Zm00025ab066930_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab066930 Zm00025ab066930_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab066930 Zm00025ab066930_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab066930 Zm00025ab066930_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab066940 Zm00025ab066940_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab066940 Zm00025ab066940_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab067030 Zm00025ab067030_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab067070 Zm00025ab067070_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab067070 Zm00025ab067070_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab067070 Zm00025ab067070_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab067420 Zm00025ab067420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab067420 Zm00025ab067420_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P005 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P006 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab067570 Zm00025ab067570_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab067790 Zm00025ab067790_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab067790 Zm00025ab067790_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab067790 Zm00025ab067790_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab067790 Zm00025ab067790_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab067900 Zm00025ab067900_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab067900 Zm00025ab067900_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab067900 Zm00025ab067900_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab067900 Zm00025ab067900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab068010 Zm00025ab068010_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab068050 Zm00025ab068050_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab068090 Zm00025ab068090_P001 viridiplantae PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00025ab068170 Zm00025ab068170_P001 conditional PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00025ab068170 Zm00025ab068170_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab068340 Zm00025ab068340_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab068360 Zm00025ab068360_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab068360 Zm00025ab068360_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab068360 Zm00025ab068360_P003 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab068380 Zm00025ab068380_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab068390 Zm00025ab068390_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab068410 Zm00025ab068410_P001 viridiplantae PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P001 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P002 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P003 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P004 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P005 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00025ab068440 Zm00025ab068440_P006 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab068510 Zm00025ab068510_P002 conditional PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab068580 Zm00025ab068580_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab068580 Zm00025ab068580_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab068590 Zm00025ab068590_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab068680 Zm00025ab068680_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab068680 Zm00025ab068680_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab068680 Zm00025ab068680_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab068680 Zm00025ab068680_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab068690 Zm00025ab068690_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab068690 Zm00025ab068690_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab068690 Zm00025ab068690_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab068690 Zm00025ab068690_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab068860 Zm00025ab068860_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab068860 Zm00025ab068860_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab068880 Zm00025ab068880_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab068890 Zm00025ab068890_P001 viridiplantae PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab069000 Zm00025ab069000_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab069000 Zm00025ab069000_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab069000 Zm00025ab069000_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab069000 Zm00025ab069000_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab069020 Zm00025ab069020_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab069020 Zm00025ab069020_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab069020 Zm00025ab069020_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab069020 Zm00025ab069020_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00025ab069140 Zm00025ab069140_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00025ab069140 Zm00025ab069140_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00025ab069140 Zm00025ab069140_P003 viridiplantae PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab069190 Zm00025ab069190_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab069190 Zm00025ab069190_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab069190 Zm00025ab069190_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab069190 Zm00025ab069190_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab069190 Zm00025ab069190_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab069410 Zm00025ab069410_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab069410 Zm00025ab069410_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab069410 Zm00025ab069410_P003 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab069410 Zm00025ab069410_P004 NA PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab069420 Zm00025ab069420_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P004 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P004 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab069420 Zm00025ab069420_P004 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P003 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P004 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00025ab069440 Zm00025ab069440_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab069450 Zm00025ab069450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab069450 Zm00025ab069450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab069450 Zm00025ab069450_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00025ab069790 Zm00025ab069790_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00025ab069790 Zm00025ab069790_P002 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab069810 Zm00025ab069810_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab069860 Zm00025ab069860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab069860 Zm00025ab069860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab069860 Zm00025ab069860_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab069880 Zm00025ab069880_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab070000 Zm00025ab070000_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab070020 Zm00025ab070020_P001 expected PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00025ab070270 Zm00025ab070270_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab070450 Zm00025ab070450_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab070450 Zm00025ab070450_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab070450 Zm00025ab070450_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab070450 Zm00025ab070450_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab070460 Zm00025ab070460_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab070470 Zm00025ab070470_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab070470 Zm00025ab070470_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00025ab070610 Zm00025ab070610_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00025ab070610 Zm00025ab070610_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab070830 Zm00025ab070830_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab070950 Zm00025ab070950_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab070950 Zm00025ab070950_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab070950 Zm00025ab070950_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab070950 Zm00025ab070950_P004 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab071170 Zm00025ab071170_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab071220 Zm00025ab071220_P001 expected PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00025ab071690 Zm00025ab071690_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab071760 Zm00025ab071760_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00025ab071780 Zm00025ab071780_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00025ab071780 Zm00025ab071780_P002 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P003 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P004 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P005 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071800 Zm00025ab071800_P006 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071810 Zm00025ab071810_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab071810 Zm00025ab071810_P002 ubiquitous PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab071840 Zm00025ab071840_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab071840 Zm00025ab071840_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab071840 Zm00025ab071840_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab071840 Zm00025ab071840_P004 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab072080 Zm00025ab072080_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00025ab072100 Zm00025ab072100_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00025ab072100 Zm00025ab072100_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00025ab072100 Zm00025ab072100_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00025ab072100 Zm00025ab072100_P004 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00025ab072100 Zm00025ab072100_P005 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab072310 Zm00025ab072310_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab072310 Zm00025ab072310_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab072400 Zm00025ab072400_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab072400 Zm00025ab072400_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab072460 Zm00025ab072460_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab072460 Zm00025ab072460_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab072460 Zm00025ab072460_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab072460 Zm00025ab072460_P001 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab072480 Zm00025ab072480_P003 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab072510 Zm00025ab072510_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab072510 Zm00025ab072510_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab072530 Zm00025ab072530_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab072630 Zm00025ab072630_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab072630 Zm00025ab072630_P002 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00025ab072660 Zm00025ab072660_P001 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab072670 Zm00025ab072670_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00025ab072670 Zm00025ab072670_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab072680 Zm00025ab072680_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00025ab072680 Zm00025ab072680_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab072700 Zm00025ab072700_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00025ab072740 Zm00025ab072740_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00025ab072740 Zm00025ab072740_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab072810 Zm00025ab072810_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab072820 Zm00025ab072820_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab072840 Zm00025ab072840_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab072880 Zm00025ab072880_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab072880 Zm00025ab072880_P002 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P002 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P003 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P004 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P005 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P006 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P007 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P008 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P009 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00025ab072940 Zm00025ab072940_P010 conditional PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab073230 Zm00025ab073230_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab073230 Zm00025ab073230_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab073320 Zm00025ab073320_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab073360 Zm00025ab073360_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab073440 Zm00025ab073440_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab073440 Zm00025ab073440_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab073450 Zm00025ab073450_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab073450 Zm00025ab073450_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab073460 Zm00025ab073460_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P003 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P003 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P004 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab073630 Zm00025ab073630_P004 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P004 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab073830 Zm00025ab073830_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00025ab074070 Zm00025ab074070_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00025ab074070 Zm00025ab074070_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00025ab074070 Zm00025ab074070_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00025ab074070 Zm00025ab074070_P002 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P005 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab074200 Zm00025ab074200_P006 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab074330 Zm00025ab074330_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab074350 Zm00025ab074350_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab074360 Zm00025ab074360_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab074400 Zm00025ab074400_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab074420 Zm00025ab074420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab074640 Zm00025ab074640_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab074870 Zm00025ab074870_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab074870 Zm00025ab074870_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab074870 Zm00025ab074870_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab074870 Zm00025ab074870_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab075100 Zm00025ab075100_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab075100 Zm00025ab075100_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab075100 Zm00025ab075100_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab075100 Zm00025ab075100_P002 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00025ab075220 Zm00025ab075220_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00025ab075220 Zm00025ab075220_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00025ab075220 Zm00025ab075220_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab075650 Zm00025ab075650_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab075650 Zm00025ab075650_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab075650 Zm00025ab075650_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab075650 Zm00025ab075650_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab075650 Zm00025ab075650_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab076010 Zm00025ab076010_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab076170 Zm00025ab076170_P001 expected PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00025ab076190 Zm00025ab076190_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab076190 Zm00025ab076190_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab076190 Zm00025ab076190_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab076210 Zm00025ab076210_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab076470 Zm00025ab076470_P004 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13642 EC-1.13.11.68 Zm00025ab076480 Zm00025ab076480_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab076530 Zm00025ab076530_P002 NA PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab076650 Zm00025ab076650_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab076650 Zm00025ab076650_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab076690 Zm00025ab076690_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab076690 Zm00025ab076690_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab076690 Zm00025ab076690_P003 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab076890 Zm00025ab076890_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab076960 Zm00025ab076960_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00025ab077000 Zm00025ab077000_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00025ab077000 Zm00025ab077000_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab077370 Zm00025ab077370_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab077370 Zm00025ab077370_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab077580 Zm00025ab077580_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab077580 Zm00025ab077580_P002 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab077600 Zm00025ab077600_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00025ab077660 Zm00025ab077660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab077880 Zm00025ab077880_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078020 Zm00025ab078020_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078030 Zm00025ab078030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078030 Zm00025ab078030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078030 Zm00025ab078030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078040 Zm00025ab078040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078040 Zm00025ab078040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078040 Zm00025ab078040_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078050 Zm00025ab078050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078050 Zm00025ab078050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078050 Zm00025ab078050_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078060 Zm00025ab078060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078060 Zm00025ab078060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078060 Zm00025ab078060_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab078080 Zm00025ab078080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078080 Zm00025ab078080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab078080 Zm00025ab078080_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab078400 Zm00025ab078400_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab078460 Zm00025ab078460_P002 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab078490 Zm00025ab078490_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab078510 Zm00025ab078510_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab078590 Zm00025ab078590_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab078590 Zm00025ab078590_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab078800 Zm00025ab078800_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab078800 Zm00025ab078800_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab078800 Zm00025ab078800_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab078800 Zm00025ab078800_P002 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab078810 Zm00025ab078810_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab078810 Zm00025ab078810_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P005 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P006 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab078830 Zm00025ab078830_P007 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab078840 Zm00025ab078840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab078840 Zm00025ab078840_P002 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab078860 Zm00025ab078860_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab079050 Zm00025ab079050_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab079100 Zm00025ab079100_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab079120 Zm00025ab079120_P001 expected PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab079290 Zm00025ab079290_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab079290 Zm00025ab079290_P002 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab079290 Zm00025ab079290_P003 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab079290 Zm00025ab079290_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab079550 Zm00025ab079550_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab079550 Zm00025ab079550_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab079550 Zm00025ab079550_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab079550 Zm00025ab079550_P002 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab079570 Zm00025ab079570_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab079570 Zm00025ab079570_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab079590 Zm00025ab079590_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab079590 Zm00025ab079590_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab079600 Zm00025ab079600_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079610 Zm00025ab079610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079610 Zm00025ab079610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079610 Zm00025ab079610_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079610 Zm00025ab079610_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079670 Zm00025ab079670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079670 Zm00025ab079670_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079670 Zm00025ab079670_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079670 Zm00025ab079670_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab079670 Zm00025ab079670_P005 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079720 Zm00025ab079720_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079720 Zm00025ab079720_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079750 Zm00025ab079750_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079770 Zm00025ab079770_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079770 Zm00025ab079770_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079770 Zm00025ab079770_P003 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079770 Zm00025ab079770_P004 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab079770 Zm00025ab079770_P005 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab080010 Zm00025ab080010_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab080010 Zm00025ab080010_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab080010 Zm00025ab080010_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab080020 Zm00025ab080020_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab080050 Zm00025ab080050_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab080150 Zm00025ab080150_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab080230 Zm00025ab080230_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab080230 Zm00025ab080230_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00025ab080240 Zm00025ab080240_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00025ab080240 Zm00025ab080240_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00025ab080240 Zm00025ab080240_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00025ab080240 Zm00025ab080240_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00025ab080240 Zm00025ab080240_P005 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab080410 Zm00025ab080410_P002 NA ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab080560 Zm00025ab080560_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab080560 Zm00025ab080560_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab080560 Zm00025ab080560_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab080560 Zm00025ab080560_P002 viridiplantae PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab080620 Zm00025ab080620_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab080620 Zm00025ab080620_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab080620 Zm00025ab080620_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab080620 Zm00025ab080620_P001 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab080850 Zm00025ab080850_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab080860 Zm00025ab080860_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab080870 Zm00025ab080870_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab081140 Zm00025ab081140_P003 viridiplantae GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P001 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P002 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P003 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P004 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00025ab081360 Zm00025ab081360_P004 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab081410 Zm00025ab081410_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab081410 Zm00025ab081410_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab081410 Zm00025ab081410_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab081410 Zm00025ab081410_P004 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab081500 Zm00025ab081500_P002 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab081650 Zm00025ab081650_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab081650 Zm00025ab081650_P002 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00025ab081990 Zm00025ab081990_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab082060 Zm00025ab082060_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab082090 Zm00025ab082090_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab082090 Zm00025ab082090_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab082090 Zm00025ab082090_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab082330 Zm00025ab082330_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab082330 Zm00025ab082330_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab082330 Zm00025ab082330_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab082680 Zm00025ab082680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab082680 Zm00025ab082680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab082680 Zm00025ab082680_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab082710 Zm00025ab082710_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab082710 Zm00025ab082710_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab082770 Zm00025ab082770_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab082770 Zm00025ab082770_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab082770 Zm00025ab082770_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab082790 Zm00025ab082790_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab082790 Zm00025ab082790_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00025ab082970 Zm00025ab082970_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00025ab082970 Zm00025ab082970_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab083090 Zm00025ab083090_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab083090 Zm00025ab083090_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab083090 Zm00025ab083090_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab083090 Zm00025ab083090_P003 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab083130 Zm00025ab083130_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab083140 Zm00025ab083140_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab083140 Zm00025ab083140_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab083160 Zm00025ab083160_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab083180 Zm00025ab083180_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab083180 Zm00025ab083180_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab083180 Zm00025ab083180_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab083180 Zm00025ab083180_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00025ab083180 Zm00025ab083180_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00025ab083180 Zm00025ab083180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00025ab083180 Zm00025ab083180_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab083270 Zm00025ab083270_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab083270 Zm00025ab083270_P002 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab083270 Zm00025ab083270_P003 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00025ab083440 Zm00025ab083440_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab083450 Zm00025ab083450_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab083450 Zm00025ab083450_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab083450 Zm00025ab083450_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab083450 Zm00025ab083450_P001 NA PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab083580 Zm00025ab083580_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab083580 Zm00025ab083580_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab083580 Zm00025ab083580_P001 excluded PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab083730 Zm00025ab083730_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab083730 Zm00025ab083730_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab083730 Zm00025ab083730_P003 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab083740 Zm00025ab083740_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab083740 Zm00025ab083740_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab083750 Zm00025ab083750_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab083750 Zm00025ab083750_P002 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.103-RXN EC-2.3.1.103 Zm00025ab083760 Zm00025ab083760_P001 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00025ab083770 Zm00025ab083770_P001 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab083780 Zm00025ab083780_P001 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab083790 Zm00025ab083790_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab083790 Zm00025ab083790_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab083790 Zm00025ab083790_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00025ab084000 Zm00025ab084000_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00025ab084000 Zm00025ab084000_P002 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00025ab084000 Zm00025ab084000_P003 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab084210 Zm00025ab084210_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab084210 Zm00025ab084210_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab084210 Zm00025ab084210_P003 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab084210 Zm00025ab084210_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab084580 Zm00025ab084580_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab084640 Zm00025ab084640_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab084700 Zm00025ab084700_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab084700 Zm00025ab084700_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab084700 Zm00025ab084700_P003 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GART-RXN EC-2.1.2.2 Zm00025ab084880 Zm00025ab084880_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate GART-RXN EC-2.1.2.2 Zm00025ab084880 Zm00025ab084880_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab085030 Zm00025ab085030_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab085030 Zm00025ab085030_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab085030 Zm00025ab085030_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab085030 Zm00025ab085030_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab085040 Zm00025ab085040_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab085040 Zm00025ab085040_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab085040 Zm00025ab085040_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab085040 Zm00025ab085040_P004 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab085040 Zm00025ab085040_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085070 Zm00025ab085070_P006 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab085260 Zm00025ab085260_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab085280 Zm00025ab085280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab085280 Zm00025ab085280_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab085280 Zm00025ab085280_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab085300 Zm00025ab085300_P001 NA CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab085370 Zm00025ab085370_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab085370 Zm00025ab085370_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab085560 Zm00025ab085560_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab085560 Zm00025ab085560_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab085560 Zm00025ab085560_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab085560 Zm00025ab085560_P001 NA PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab085610 Zm00025ab085610_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab085610 Zm00025ab085610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085750 Zm00025ab085750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085750 Zm00025ab085750_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085750 Zm00025ab085750_P003 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab085760 Zm00025ab085760_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab085760 Zm00025ab085760_P002 viridiplantae PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab085800 Zm00025ab085800_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab085840 Zm00025ab085840_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab085840 Zm00025ab085840_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab085840 Zm00025ab085840_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab085840 Zm00025ab085840_P004 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab085900 Zm00025ab085900_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab085920 Zm00025ab085920_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab085920 Zm00025ab085920_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab085920 Zm00025ab085920_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085950 Zm00025ab085950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085950 Zm00025ab085950_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085980 Zm00025ab085980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085980 Zm00025ab085980_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab085980 Zm00025ab085980_P003 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab086020 Zm00025ab086020_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab086170 Zm00025ab086170_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab086170 Zm00025ab086170_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab086170 Zm00025ab086170_P003 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab086170 Zm00025ab086170_P004 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab086230 Zm00025ab086230_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P001 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P003 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab086260 Zm00025ab086260_P004 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab086410 Zm00025ab086410_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab086480 Zm00025ab086480_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab086480 Zm00025ab086480_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab086490 Zm00025ab086490_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab086490 Zm00025ab086490_P001 expected PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00025ab086650 Zm00025ab086650_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab086840 Zm00025ab086840_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab086890 Zm00025ab086890_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab086890 Zm00025ab086890_P002 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab087290 Zm00025ab087290_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab087290 Zm00025ab087290_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab087300 Zm00025ab087300_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab087300 Zm00025ab087300_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab087300 Zm00025ab087300_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab087330 Zm00025ab087330_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab087390 Zm00025ab087390_P001 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P005 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P006 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P007 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00025ab087410 Zm00025ab087410_P008 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab087510 Zm00025ab087510_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab087510 Zm00025ab087510_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab087510 Zm00025ab087510_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab087510 Zm00025ab087510_P004 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab087570 Zm00025ab087570_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab087570 Zm00025ab087570_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab087570 Zm00025ab087570_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab087570 Zm00025ab087570_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab087830 Zm00025ab087830_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab088030 Zm00025ab088030_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab088030 Zm00025ab088030_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab088050 Zm00025ab088050_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab088050 Zm00025ab088050_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab088050 Zm00025ab088050_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab088090 Zm00025ab088090_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab088090 Zm00025ab088090_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab088090 Zm00025ab088090_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab088090 Zm00025ab088090_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab088300 Zm00025ab088300_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab088410 Zm00025ab088410_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab088410 Zm00025ab088410_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab088510 Zm00025ab088510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab088510 Zm00025ab088510_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab088540 Zm00025ab088540_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab088570 Zm00025ab088570_P001 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab088990 Zm00025ab088990_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab088990 Zm00025ab088990_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab088990 Zm00025ab088990_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab088990 Zm00025ab088990_P004 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab089000 Zm00025ab089000_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab089000 Zm00025ab089000_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab089000 Zm00025ab089000_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab089000 Zm00025ab089000_P002 expected PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab089190 Zm00025ab089190_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab089260 Zm00025ab089260_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab089330 Zm00025ab089330_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab089330 Zm00025ab089330_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00025ab089400 Zm00025ab089400_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab089400 Zm00025ab089400_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab089400 Zm00025ab089400_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab089510 Zm00025ab089510_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab089510 Zm00025ab089510_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab089920 Zm00025ab089920_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab089920 Zm00025ab089920_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab090070 Zm00025ab090070_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab090070 Zm00025ab090070_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab090090 Zm00025ab090090_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab090230 Zm00025ab090230_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab090230 Zm00025ab090230_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab090230 Zm00025ab090230_P003 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab090430 Zm00025ab090430_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab090430 Zm00025ab090430_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab090430 Zm00025ab090430_P001 expected PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00025ab090450 Zm00025ab090450_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00025ab090450 Zm00025ab090450_P001 conditional PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00025ab090630 Zm00025ab090630_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00025ab090630 Zm00025ab090630_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab090790 Zm00025ab090790_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab090790 Zm00025ab090790_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab090810 Zm00025ab090810_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab090890 Zm00025ab090890_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab090890 Zm00025ab090890_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab091000 Zm00025ab091000_P004 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab091020 Zm00025ab091020_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab091020 Zm00025ab091020_P001 ubiquitous PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab091030 Zm00025ab091030_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab091090 Zm00025ab091090_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab091210 Zm00025ab091210_P001 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab091240 Zm00025ab091240_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab091240 Zm00025ab091240_P001 NA ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P001 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P001 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab091390 Zm00025ab091390_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab091390 Zm00025ab091390_P002 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P002 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P002 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P003 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00025ab091390 Zm00025ab091390_P003 ubiquitous PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P005 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab091650 Zm00025ab091650_P005 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab091710 Zm00025ab091710_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab092500 Zm00025ab092500_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab092500 Zm00025ab092500_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab092530 Zm00025ab092530_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab092860 Zm00025ab092860_P002 NA ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab092970 Zm00025ab092970_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab092970 Zm00025ab092970_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab093120 Zm00025ab093120_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab093270 Zm00025ab093270_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab093270 Zm00025ab093270_P001 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab093430 Zm00025ab093430_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab093430 Zm00025ab093430_P002 expected GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab093650 Zm00025ab093650_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P006 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P006 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab093820 Zm00025ab093820_P006 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab093890 Zm00025ab093890_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab093910 Zm00025ab093910_P001 ubiquitous PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab093950 Zm00025ab093950_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab093950 Zm00025ab093950_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab093950 Zm00025ab093950_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab093980 Zm00025ab093980_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab093990 Zm00025ab093990_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab093990 Zm00025ab093990_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab094350 Zm00025ab094350_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab094350 Zm00025ab094350_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab094600 Zm00025ab094600_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab094600 Zm00025ab094600_P002 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab094750 Zm00025ab094750_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab094890 Zm00025ab094890_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab094890 Zm00025ab094890_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab094890 Zm00025ab094890_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab095600 Zm00025ab095600_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab095600 Zm00025ab095600_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab095600 Zm00025ab095600_P002 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab095600 Zm00025ab095600_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab095770 Zm00025ab095770_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab095770 Zm00025ab095770_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab095770 Zm00025ab095770_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab095770 Zm00025ab095770_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab096060 Zm00025ab096060_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab096060 Zm00025ab096060_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab096100 Zm00025ab096100_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab096100 Zm00025ab096100_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab096250 Zm00025ab096250_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab096290 Zm00025ab096290_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab096290 Zm00025ab096290_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00025ab096300 Zm00025ab096300_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab096350 Zm00025ab096350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab096370 Zm00025ab096370_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab096810 Zm00025ab096810_P002 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab096860 Zm00025ab096860_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab096860 Zm00025ab096860_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab096860 Zm00025ab096860_P003 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00025ab096930 Zm00025ab096930_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab097080 Zm00025ab097080_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab097400 Zm00025ab097400_P001 viridiplantae PWY-5530 sorbitol biosynthesis II 1.1.99.28-RXN EC-1.1.99.28 Zm00025ab097810 Zm00025ab097810_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab097910 Zm00025ab097910_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab097920 Zm00025ab097920_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P005 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab097930 Zm00025ab097930_P005 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab097960 Zm00025ab097960_P001 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P001 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P002 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00025ab097970 Zm00025ab097970_P002 excluded BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab098010 Zm00025ab098010_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab098010 Zm00025ab098010_P002 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab098010 Zm00025ab098010_P003 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab098130 Zm00025ab098130_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab098160 Zm00025ab098160_P001 conditional PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098300 Zm00025ab098300_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098300 Zm00025ab098300_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098300 Zm00025ab098300_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098300 Zm00025ab098300_P004 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098300 Zm00025ab098300_P005 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098320 Zm00025ab098320_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab098320 Zm00025ab098320_P002 NA PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab098540 Zm00025ab098540_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab098600 Zm00025ab098600_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab098610 Zm00025ab098610_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab098610 Zm00025ab098610_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab098810 Zm00025ab098810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab098810 Zm00025ab098810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab098810 Zm00025ab098810_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab098970 Zm00025ab098970_P002 NA PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab099090 Zm00025ab099090_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab099220 Zm00025ab099220_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab099220 Zm00025ab099220_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab099220 Zm00025ab099220_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab099260 Zm00025ab099260_P001 viridiplantae PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P001 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P001 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P002 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P002 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P003 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P003 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P004 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P004 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P005 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P005 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P006 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P006 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P006 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00025ab099300 Zm00025ab099300_P006 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab099330 Zm00025ab099330_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab099360 Zm00025ab099360_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab099380 Zm00025ab099380_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab099590 Zm00025ab099590_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099590 Zm00025ab099590_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab099590 Zm00025ab099590_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099590 Zm00025ab099590_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab099630 Zm00025ab099630_P004 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab099690 Zm00025ab099690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00025ab099690 Zm00025ab099690_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab099890 Zm00025ab099890_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab099890 Zm00025ab099890_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab099890 Zm00025ab099890_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab099970 Zm00025ab099970_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab099970 Zm00025ab099970_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab099990 Zm00025ab099990_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab099990 Zm00025ab099990_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab099990 Zm00025ab099990_P003 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab100050 Zm00025ab100050_P001 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab100060 Zm00025ab100060_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab100060 Zm00025ab100060_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab100060 Zm00025ab100060_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab100060 Zm00025ab100060_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab100060 Zm00025ab100060_P005 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab100090 Zm00025ab100090_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab100100 Zm00025ab100100_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab100130 Zm00025ab100130_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab100270 Zm00025ab100270_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab100270 Zm00025ab100270_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab100270 Zm00025ab100270_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab100300 Zm00025ab100300_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab100320 Zm00025ab100320_P004 ubiquitous SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P006 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab100360 Zm00025ab100360_P007 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab100360 Zm00025ab100360_P008 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab100530 Zm00025ab100530_P001 expected HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab100610 Zm00025ab100610_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab100610 Zm00025ab100610_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab100610 Zm00025ab100610_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab100610 Zm00025ab100610_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab100670 Zm00025ab100670_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab100670 Zm00025ab100670_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab100670 Zm00025ab100670_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab100670 Zm00025ab100670_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab100720 Zm00025ab100720_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab100830 Zm00025ab100830_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab100830 Zm00025ab100830_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab100830 Zm00025ab100830_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab100830 Zm00025ab100830_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab100830 Zm00025ab100830_P005 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P006 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab100920 Zm00025ab100920_P007 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab101130 Zm00025ab101130_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab101130 Zm00025ab101130_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab101130 Zm00025ab101130_P001 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab101190 Zm00025ab101190_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab101250 Zm00025ab101250_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab101250 Zm00025ab101250_P001 ubiquitous PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab101270 Zm00025ab101270_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab101270 Zm00025ab101270_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab101270 Zm00025ab101270_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab101270 Zm00025ab101270_P001 NA PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab101320 Zm00025ab101320_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab101320 Zm00025ab101320_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab101320 Zm00025ab101320_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab101320 Zm00025ab101320_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab101320 Zm00025ab101320_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab101320 Zm00025ab101320_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab101320 Zm00025ab101320_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab101320 Zm00025ab101320_P001 excluded PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab101380 Zm00025ab101380_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab101430 Zm00025ab101430_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab101430 Zm00025ab101430_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab101430 Zm00025ab101430_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab101500 Zm00025ab101500_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab101500 Zm00025ab101500_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab101500 Zm00025ab101500_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab101500 Zm00025ab101500_P004 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab101680 Zm00025ab101680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab101680 Zm00025ab101680_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab101680 Zm00025ab101680_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab101680 Zm00025ab101680_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab101680 Zm00025ab101680_P005 NA TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab101750 Zm00025ab101750_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab101820 Zm00025ab101820_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab101820 Zm00025ab101820_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab101820 Zm00025ab101820_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab101820 Zm00025ab101820_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab101820 Zm00025ab101820_P001 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab101880 Zm00025ab101880_P004 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab102000 Zm00025ab102000_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab102000 Zm00025ab102000_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab102000 Zm00025ab102000_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab102000 Zm00025ab102000_P002 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab102030 Zm00025ab102030_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab102040 Zm00025ab102040_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab102230 Zm00025ab102230_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab102230 Zm00025ab102230_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab102230 Zm00025ab102230_P001 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab102250 Zm00025ab102250_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab102250 Zm00025ab102250_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00025ab102250 Zm00025ab102250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab102730 Zm00025ab102730_P005 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab102850 Zm00025ab102850_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab102850 Zm00025ab102850_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab102850 Zm00025ab102850_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab102890 Zm00025ab102890_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab102910 Zm00025ab102910_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab102910 Zm00025ab102910_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab103180 Zm00025ab103180_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab103180 Zm00025ab103180_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab103390 Zm00025ab103390_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab103420 Zm00025ab103420_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab103420 Zm00025ab103420_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab103420 Zm00025ab103420_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab103420 Zm00025ab103420_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab103490 Zm00025ab103490_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab103540 Zm00025ab103540_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab103540 Zm00025ab103540_P001 expected PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab103800 Zm00025ab103800_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab104070 Zm00025ab104070_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab104070 Zm00025ab104070_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab104070 Zm00025ab104070_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab104100 Zm00025ab104100_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab104100 Zm00025ab104100_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab104100 Zm00025ab104100_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab104110 Zm00025ab104110_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab104110 Zm00025ab104110_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab104110 Zm00025ab104110_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab104110 Zm00025ab104110_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab104240 Zm00025ab104240_P004 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab104270 Zm00025ab104270_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab104330 Zm00025ab104330_P001 conditional ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab104600 Zm00025ab104600_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab104600 Zm00025ab104600_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab104640 Zm00025ab104640_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab104640 Zm00025ab104640_P001 expected LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab104780 Zm00025ab104780_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab104780 Zm00025ab104780_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab104820 Zm00025ab104820_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab104820 Zm00025ab104820_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab104820 Zm00025ab104820_P003 expected PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab104920 Zm00025ab104920_P004 NA PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab105140 Zm00025ab105140_P001 ubiquitous PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab105290 Zm00025ab105290_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab105290 Zm00025ab105290_P002 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab105340 Zm00025ab105340_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab105340 Zm00025ab105340_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab105360 Zm00025ab105360_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab105390 Zm00025ab105390_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab105390 Zm00025ab105390_P002 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab105550 Zm00025ab105550_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab105550 Zm00025ab105550_P001 excluded PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab105720 Zm00025ab105720_P003 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab105780 Zm00025ab105780_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab105780 Zm00025ab105780_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab105780 Zm00025ab105780_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab105780 Zm00025ab105780_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab105780 Zm00025ab105780_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab105780 Zm00025ab105780_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab105780 Zm00025ab105780_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab105780 Zm00025ab105780_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab105870 Zm00025ab105870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab105870 Zm00025ab105870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab105870 Zm00025ab105870_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab105980 Zm00025ab105980_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab105980 Zm00025ab105980_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab106170 Zm00025ab106170_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab106270 Zm00025ab106270_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab106270 Zm00025ab106270_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab106270 Zm00025ab106270_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab106270 Zm00025ab106270_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab106270 Zm00025ab106270_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab106270 Zm00025ab106270_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab106390 Zm00025ab106390_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab106400 Zm00025ab106400_P001 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab106520 Zm00025ab106520_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab106520 Zm00025ab106520_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab106520 Zm00025ab106520_P003 ubiquitous OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab106790 Zm00025ab106790_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab107040 Zm00025ab107040_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab107040 Zm00025ab107040_P002 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab107180 Zm00025ab107180_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00025ab107290 Zm00025ab107290_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00025ab107290 Zm00025ab107290_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00025ab107290 Zm00025ab107290_P003 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab107410 Zm00025ab107410_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107490 Zm00025ab107490_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107490 Zm00025ab107490_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107490 Zm00025ab107490_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107520 Zm00025ab107520_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107520 Zm00025ab107520_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab107520 Zm00025ab107520_P001 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P002 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab107600 Zm00025ab107600_P003 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab107980 Zm00025ab107980_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab107980 Zm00025ab107980_P001 excluded PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab107980 Zm00025ab107980_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab107980 Zm00025ab107980_P002 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab108090 Zm00025ab108090_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab108090 Zm00025ab108090_P002 NA PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108260 Zm00025ab108260_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108260 Zm00025ab108260_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108260 Zm00025ab108260_P003 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108260 Zm00025ab108260_P004 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108260 Zm00025ab108260_P005 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108270 Zm00025ab108270_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab108270 Zm00025ab108270_P002 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab108590 Zm00025ab108590_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab108590 Zm00025ab108590_P002 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab108650 Zm00025ab108650_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab108650 Zm00025ab108650_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab108650 Zm00025ab108650_P004 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab108650 Zm00025ab108650_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab108660 Zm00025ab108660_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab108660 Zm00025ab108660_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab108660 Zm00025ab108660_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab108660 Zm00025ab108660_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab108660 Zm00025ab108660_P005 expected PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab108740 Zm00025ab108740_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab109150 Zm00025ab109150_P001 conditional SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P002 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P003 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab109390 Zm00025ab109390_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RXN-9276 EC-1.3.1.107 Zm00025ab109660 Zm00025ab109660_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab109730 Zm00025ab109730_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab109730 Zm00025ab109730_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab109840 Zm00025ab109840_P001 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab110050 Zm00025ab110050_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab110320 Zm00025ab110320_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab110440 Zm00025ab110440_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab110590 Zm00025ab110590_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P004 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P005 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab110610 Zm00025ab110610_P005 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab110960 Zm00025ab110960_P002 NA PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab111090 Zm00025ab111090_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab111090 Zm00025ab111090_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab111090 Zm00025ab111090_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab111090 Zm00025ab111090_P004 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab111190 Zm00025ab111190_P001 expected PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab111200 Zm00025ab111200_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab111200 Zm00025ab111200_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab111200 Zm00025ab111200_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab111200 Zm00025ab111200_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab111200 Zm00025ab111200_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab111200 Zm00025ab111200_P003 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab111270 Zm00025ab111270_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab111270 Zm00025ab111270_P001 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab111330 Zm00025ab111330_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab111330 Zm00025ab111330_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab111330 Zm00025ab111330_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab111350 Zm00025ab111350_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab111350 Zm00025ab111350_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab111350 Zm00025ab111350_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab111350 Zm00025ab111350_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab111350 Zm00025ab111350_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab111350 Zm00025ab111350_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab111350 Zm00025ab111350_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab111350 Zm00025ab111350_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P002 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P002 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P002 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P002 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P003 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P003 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P003 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P003 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P004 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P004 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P004 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab111400 Zm00025ab111400_P004 NA PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab111410 Zm00025ab111410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00025ab112130 Zm00025ab112130_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00025ab112130 Zm00025ab112130_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab112230 Zm00025ab112230_P001 conditional PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00025ab112240 Zm00025ab112240_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00025ab112240 Zm00025ab112240_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00025ab112240 Zm00025ab112240_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab112250 Zm00025ab112250_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab112710 Zm00025ab112710_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab112710 Zm00025ab112710_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab112710 Zm00025ab112710_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab112710 Zm00025ab112710_P002 ubiquitous LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab112760 Zm00025ab112760_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab112810 Zm00025ab112810_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab112810 Zm00025ab112810_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab112810 Zm00025ab112810_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab112840 Zm00025ab112840_P001 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab112950 Zm00025ab112950_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab112950 Zm00025ab112950_P003 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab112970 Zm00025ab112970_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab112970 Zm00025ab112970_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab112970 Zm00025ab112970_P003 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab113070 Zm00025ab113070_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab113110 Zm00025ab113110_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab113110 Zm00025ab113110_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P004 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P005 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P005 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P006 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P006 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P007 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab113180 Zm00025ab113180_P007 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P005 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab113190 Zm00025ab113190_P006 ubiquitous PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab113210 Zm00025ab113210_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab113270 Zm00025ab113270_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab113360 Zm00025ab113360_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab113360 Zm00025ab113360_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab113360 Zm00025ab113360_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab113360 Zm00025ab113360_P004 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab113430 Zm00025ab113430_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab113480 Zm00025ab113480_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab113500 Zm00025ab113500_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab113510 Zm00025ab113510_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab113510 Zm00025ab113510_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab113550 Zm00025ab113550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113550 Zm00025ab113550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113550 Zm00025ab113550_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab113570 Zm00025ab113570_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab113590 Zm00025ab113590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113590 Zm00025ab113590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113590 Zm00025ab113590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab113600 Zm00025ab113600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113600 Zm00025ab113600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab113600 Zm00025ab113600_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab113660 Zm00025ab113660_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab114240 Zm00025ab114240_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab114270 Zm00025ab114270_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00025ab114370 Zm00025ab114370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab114410 Zm00025ab114410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab114410 Zm00025ab114410_P002 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab114550 Zm00025ab114550_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab114550 Zm00025ab114550_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab114870 Zm00025ab114870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab114870 Zm00025ab114870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab114870 Zm00025ab114870_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab114890 Zm00025ab114890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab114890 Zm00025ab114890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab114890 Zm00025ab114890_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab115080 Zm00025ab115080_P006 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab115100 Zm00025ab115100_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab115190 Zm00025ab115190_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab115190 Zm00025ab115190_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab115190 Zm00025ab115190_P001 excluded PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab115400 Zm00025ab115400_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab115400 Zm00025ab115400_P002 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab115400 Zm00025ab115400_P003 conditional PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab115460 Zm00025ab115460_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab115460 Zm00025ab115460_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab115460 Zm00025ab115460_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab115460 Zm00025ab115460_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P005 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P005 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P005 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab115470 Zm00025ab115470_P005 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab115510 Zm00025ab115510_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab115510 Zm00025ab115510_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab115510 Zm00025ab115510_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab115510 Zm00025ab115510_P004 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab115690 Zm00025ab115690_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab115690 Zm00025ab115690_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab115690 Zm00025ab115690_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab115710 Zm00025ab115710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab115710 Zm00025ab115710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab115710 Zm00025ab115710_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab115990 Zm00025ab115990_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab115990 Zm00025ab115990_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab116050 Zm00025ab116050_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab116050 Zm00025ab116050_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab116120 Zm00025ab116120_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab116120 Zm00025ab116120_P002 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab116210 Zm00025ab116210_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P003 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P004 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab116260 Zm00025ab116260_P004 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P004 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab116260 Zm00025ab116260_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab116420 Zm00025ab116420_P001 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab116460 Zm00025ab116460_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab116460 Zm00025ab116460_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab116460 Zm00025ab116460_P001 NA PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00025ab116470 Zm00025ab116470_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00025ab116470 Zm00025ab116470_P002 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00025ab116470 Zm00025ab116470_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab116490 Zm00025ab116490_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00025ab116560 Zm00025ab116560_P001 expected PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00025ab116560 Zm00025ab116560_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab116620 Zm00025ab116620_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab116620 Zm00025ab116620_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab116790 Zm00025ab116790_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab116790 Zm00025ab116790_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab116790 Zm00025ab116790_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab116790 Zm00025ab116790_P001 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab117240 Zm00025ab117240_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab117240 Zm00025ab117240_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab117240 Zm00025ab117240_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab117240 Zm00025ab117240_P004 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab117440 Zm00025ab117440_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab117440 Zm00025ab117440_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab117640 Zm00025ab117640_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab117640 Zm00025ab117640_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab117640 Zm00025ab117640_P001 manual CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab117660 Zm00025ab117660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab117660 Zm00025ab117660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab117660 Zm00025ab117660_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab117690 Zm00025ab117690_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab117690 Zm00025ab117690_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab117690 Zm00025ab117690_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab117690 Zm00025ab117690_P004 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab117690 Zm00025ab117690_P005 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117750 Zm00025ab117750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117750 Zm00025ab117750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117750 Zm00025ab117750_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117750 Zm00025ab117750_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117760 Zm00025ab117760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab117760 Zm00025ab117760_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab117810 Zm00025ab117810_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab117890 Zm00025ab117890_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab117890 Zm00025ab117890_P002 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab117890 Zm00025ab117890_P003 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab118000 Zm00025ab118000_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab118030 Zm00025ab118030_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab118030 Zm00025ab118030_P002 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118360 Zm00025ab118360_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab118410 Zm00025ab118410_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118410 Zm00025ab118410_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab118410 Zm00025ab118410_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab118410 Zm00025ab118410_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab118530 Zm00025ab118530_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab118530 Zm00025ab118530_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab118530 Zm00025ab118530_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab118530 Zm00025ab118530_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab118530 Zm00025ab118530_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab118610 Zm00025ab118610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab118610 Zm00025ab118610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab118610 Zm00025ab118610_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab118610 Zm00025ab118610_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P003 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P004 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab118650 Zm00025ab118650_P004 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118680 Zm00025ab118680_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118680 Zm00025ab118680_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118680 Zm00025ab118680_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118700 Zm00025ab118700_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118740 Zm00025ab118740_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118740 Zm00025ab118740_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118740 Zm00025ab118740_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118790 Zm00025ab118790_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118790 Zm00025ab118790_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118790 Zm00025ab118790_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118800 Zm00025ab118800_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118800 Zm00025ab118800_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118800 Zm00025ab118800_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118820 Zm00025ab118820_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118820 Zm00025ab118820_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118820 Zm00025ab118820_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118830 Zm00025ab118830_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab118830 Zm00025ab118830_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab118830 Zm00025ab118830_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00025ab119100 Zm00025ab119100_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00025ab119100 Zm00025ab119100_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab119240 Zm00025ab119240_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab119240 Zm00025ab119240_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab119240 Zm00025ab119240_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab119240 Zm00025ab119240_P001 NA PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab119260 Zm00025ab119260_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab119260 Zm00025ab119260_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab119260 Zm00025ab119260_P003 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab119350 Zm00025ab119350_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab119350 Zm00025ab119350_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab119350 Zm00025ab119350_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119420 Zm00025ab119420_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119420 Zm00025ab119420_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab119420 Zm00025ab119420_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab119420 Zm00025ab119420_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab119420 Zm00025ab119420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab119780 Zm00025ab119780_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab120050 Zm00025ab120050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120360 Zm00025ab120360_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab120400 Zm00025ab120400_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab120400 Zm00025ab120400_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab120430 Zm00025ab120430_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab120430 Zm00025ab120430_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab120430 Zm00025ab120430_P003 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab120450 Zm00025ab120450_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab120600 Zm00025ab120600_P001 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00025ab120600 Zm00025ab120600_P001 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00025ab120600 Zm00025ab120600_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab120600 Zm00025ab120600_P002 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00025ab120600 Zm00025ab120600_P002 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00025ab120600 Zm00025ab120600_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab120610 Zm00025ab120610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab120610 Zm00025ab120610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab120610 Zm00025ab120610_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab120620 Zm00025ab120620_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab120620 Zm00025ab120620_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab120620 Zm00025ab120620_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab120790 Zm00025ab120790_P001 ubiquitous PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab120800 Zm00025ab120800_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab120800 Zm00025ab120800_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120900 Zm00025ab120900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120900 Zm00025ab120900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120900 Zm00025ab120900_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120900 Zm00025ab120900_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab120900 Zm00025ab120900_P005 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab120920 Zm00025ab120920_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab120920 Zm00025ab120920_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00025ab120960 Zm00025ab120960_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab120960 Zm00025ab120960_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab120960 Zm00025ab120960_P001 NA PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00025ab121240 Zm00025ab121240_P001 ubiquitous PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab121260 Zm00025ab121260_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab121260 Zm00025ab121260_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab121260 Zm00025ab121260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab121260 Zm00025ab121260_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab121260 Zm00025ab121260_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab121380 Zm00025ab121380_P002 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00025ab121450 Zm00025ab121450_P001 ubiquitous PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab121510 Zm00025ab121510_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P002 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P002 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab121510 Zm00025ab121510_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P003 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P003 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P003 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P003 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab121510 Zm00025ab121510_P003 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P004 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P004 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab121510 Zm00025ab121510_P004 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab121510 Zm00025ab121510_P004 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab121510 Zm00025ab121510_P004 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab121510 Zm00025ab121510_P004 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab121520 Zm00025ab121520_P001 conditional PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab122140 Zm00025ab122140_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab122140 Zm00025ab122140_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab122150 Zm00025ab122150_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab122150 Zm00025ab122150_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab122270 Zm00025ab122270_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab122300 Zm00025ab122300_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab122390 Zm00025ab122390_P001 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab122580 Zm00025ab122580_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab122600 Zm00025ab122600_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab122720 Zm00025ab122720_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab122840 Zm00025ab122840_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab122840 Zm00025ab122840_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab122870 Zm00025ab122870_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab122870 Zm00025ab122870_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab122870 Zm00025ab122870_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab123140 Zm00025ab123140_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab123150 Zm00025ab123150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab123150 Zm00025ab123150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab123150 Zm00025ab123150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab123160 Zm00025ab123160_P003 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00025ab123170 Zm00025ab123170_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab123260 Zm00025ab123260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab123260 Zm00025ab123260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab123260 Zm00025ab123260_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4243 EC-1.14.19.41 Zm00025ab123420 Zm00025ab123420_P001 ubiquitous PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab123460 Zm00025ab123460_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab123460 Zm00025ab123460_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab123490 Zm00025ab123490_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00025ab123540 Zm00025ab123540_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00025ab123540 Zm00025ab123540_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00025ab123540 Zm00025ab123540_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00025ab123540 Zm00025ab123540_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00025ab123540 Zm00025ab123540_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00025ab123540 Zm00025ab123540_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab123610 Zm00025ab123610_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab123610 Zm00025ab123610_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab123610 Zm00025ab123610_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab123660 Zm00025ab123660_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab123660 Zm00025ab123660_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab123660 Zm00025ab123660_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab123660 Zm00025ab123660_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab123670 Zm00025ab123670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab123670 Zm00025ab123670_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab123670 Zm00025ab123670_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab123670 Zm00025ab123670_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab123680 Zm00025ab123680_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab123680 Zm00025ab123680_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab123680 Zm00025ab123680_P003 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab123680 Zm00025ab123680_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00025ab123700 Zm00025ab123700_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00025ab123700 Zm00025ab123700_P002 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab123910 Zm00025ab123910_P001 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab123920 Zm00025ab123920_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab124010 Zm00025ab124010_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab124020 Zm00025ab124020_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab124020 Zm00025ab124020_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab124060 Zm00025ab124060_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab124180 Zm00025ab124180_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab124360 Zm00025ab124360_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab124360 Zm00025ab124360_P001 NA PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab124450 Zm00025ab124450_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab124500 Zm00025ab124500_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab124550 Zm00025ab124550_P005 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab124600 Zm00025ab124600_P002 manual PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab124630 Zm00025ab124630_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab124630 Zm00025ab124630_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab124630 Zm00025ab124630_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab124740 Zm00025ab124740_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab124740 Zm00025ab124740_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab124740 Zm00025ab124740_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab124740 Zm00025ab124740_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab124930 Zm00025ab124930_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab124930 Zm00025ab124930_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab125040 Zm00025ab125040_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab125090 Zm00025ab125090_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab125090 Zm00025ab125090_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab125420 Zm00025ab125420_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab125520 Zm00025ab125520_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab125520 Zm00025ab125520_P003 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab125720 Zm00025ab125720_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab125720 Zm00025ab125720_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab125720 Zm00025ab125720_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab125720 Zm00025ab125720_P003 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00025ab125740 Zm00025ab125740_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab125810 Zm00025ab125810_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab125810 Zm00025ab125810_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab125820 Zm00025ab125820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab125820 Zm00025ab125820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab125820 Zm00025ab125820_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab125820 Zm00025ab125820_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab125830 Zm00025ab125830_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab125830 Zm00025ab125830_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab126090 Zm00025ab126090_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab126090 Zm00025ab126090_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab126100 Zm00025ab126100_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab126100 Zm00025ab126100_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab126100 Zm00025ab126100_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00025ab126180 Zm00025ab126180_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00025ab126180 Zm00025ab126180_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P009 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P010 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P010 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab126210 Zm00025ab126210_P010 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5466 EC-2.4.1.258 Zm00025ab126250 Zm00025ab126250_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab126330 Zm00025ab126330_P001 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P002 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab126360 Zm00025ab126360_P003 conditional PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P002 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P003 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00025ab126410 Zm00025ab126410_P003 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00025ab126470 Zm00025ab126470_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab126630 Zm00025ab126630_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab126810 Zm00025ab126810_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab126810 Zm00025ab126810_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab126810 Zm00025ab126810_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab126960 Zm00025ab126960_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab127080 Zm00025ab127080_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab127080 Zm00025ab127080_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab127080 Zm00025ab127080_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab127080 Zm00025ab127080_P001 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab127110 Zm00025ab127110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab127110 Zm00025ab127110_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab127110 Zm00025ab127110_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab127110 Zm00025ab127110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab127110 Zm00025ab127110_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab127130 Zm00025ab127130_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab127260 Zm00025ab127260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab127260 Zm00025ab127260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab127260 Zm00025ab127260_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab127280 Zm00025ab127280_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab127280 Zm00025ab127280_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab127280 Zm00025ab127280_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab127290 Zm00025ab127290_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab127290 Zm00025ab127290_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab127290 Zm00025ab127290_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab127580 Zm00025ab127580_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127640 Zm00025ab127640_P005 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab127650 Zm00025ab127650_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P005 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P005 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P005 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P006 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P006 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P006 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P007 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P007 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab127700 Zm00025ab127700_P007 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab127730 Zm00025ab127730_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00025ab127790 Zm00025ab127790_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00025ab127790 Zm00025ab127790_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00025ab127790 Zm00025ab127790_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P005 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P005 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab127810 Zm00025ab127810_P005 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab127880 Zm00025ab127880_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab127930 Zm00025ab127930_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab127980 Zm00025ab127980_P002 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab128590 Zm00025ab128590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00025ab128590 Zm00025ab128590_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128680 Zm00025ab128680_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128680 Zm00025ab128680_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128680 Zm00025ab128680_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128680 Zm00025ab128680_P004 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128690 Zm00025ab128690_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128700 Zm00025ab128700_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128710 Zm00025ab128710_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128710 Zm00025ab128710_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab128710 Zm00025ab128710_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab128710 Zm00025ab128710_P001 NA PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128730 Zm00025ab128730_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab128730 Zm00025ab128730_P002 conditional PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00025ab128770 Zm00025ab128770_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00025ab128770 Zm00025ab128770_P001 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab128830 Zm00025ab128830_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab128830 Zm00025ab128830_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab129040 Zm00025ab129040_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab129040 Zm00025ab129040_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab129040 Zm00025ab129040_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab129040 Zm00025ab129040_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab129040 Zm00025ab129040_P005 conditional PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab129190 Zm00025ab129190_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab129190 Zm00025ab129190_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab129190 Zm00025ab129190_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab129190 Zm00025ab129190_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P004 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P005 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab129540 Zm00025ab129540_P005 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab129590 Zm00025ab129590_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab129590 Zm00025ab129590_P001 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab129650 Zm00025ab129650_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P002 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab129760 Zm00025ab129760_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab129980 Zm00025ab129980_P002 conditional PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab130050 Zm00025ab130050_P001 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00025ab130240 Zm00025ab130240_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00025ab130240 Zm00025ab130240_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab130280 Zm00025ab130280_P003 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab130320 Zm00025ab130320_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab130320 Zm00025ab130320_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab130320 Zm00025ab130320_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab130400 Zm00025ab130400_P001 ubiquitous PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab130420 Zm00025ab130420_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab130630 Zm00025ab130630_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P004 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P005 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P006 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P007 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab130770 Zm00025ab130770_P008 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab130780 Zm00025ab130780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab130780 Zm00025ab130780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab130780 Zm00025ab130780_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab130780 Zm00025ab130780_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab130780 Zm00025ab130780_P005 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab130900 Zm00025ab130900_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab130900 Zm00025ab130900_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab130900 Zm00025ab130900_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab130900 Zm00025ab130900_P002 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab130910 Zm00025ab130910_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab130910 Zm00025ab130910_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab130910 Zm00025ab130910_P003 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab130910 Zm00025ab130910_P004 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab130990 Zm00025ab130990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab130990 Zm00025ab130990_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab131070 Zm00025ab131070_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab131080 Zm00025ab131080_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab131180 Zm00025ab131180_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab131420 Zm00025ab131420_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab131610 Zm00025ab131610_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab131610 Zm00025ab131610_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab131670 Zm00025ab131670_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab132150 Zm00025ab132150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab132150 Zm00025ab132150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab132150 Zm00025ab132150_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00025ab132210 Zm00025ab132210_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00025ab132210 Zm00025ab132210_P002 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab132270 Zm00025ab132270_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab132300 Zm00025ab132300_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab132390 Zm00025ab132390_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab132450 Zm00025ab132450_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab132450 Zm00025ab132450_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab132450 Zm00025ab132450_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab132450 Zm00025ab132450_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab132460 Zm00025ab132460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab132460 Zm00025ab132460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab132460 Zm00025ab132460_P001 conditional PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00025ab132470 Zm00025ab132470_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab132740 Zm00025ab132740_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab132790 Zm00025ab132790_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab132790 Zm00025ab132790_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab132790 Zm00025ab132790_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab132790 Zm00025ab132790_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab133300 Zm00025ab133300_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab133300 Zm00025ab133300_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab133400 Zm00025ab133400_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab133400 Zm00025ab133400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab133420 Zm00025ab133420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab133420 Zm00025ab133420_P002 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab133490 Zm00025ab133490_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab133490 Zm00025ab133490_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab133500 Zm00025ab133500_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab133500 Zm00025ab133500_P001 NA PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00025ab133600 Zm00025ab133600_P001 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00025ab133600 Zm00025ab133600_P002 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab133700 Zm00025ab133700_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab133800 Zm00025ab133800_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133800 Zm00025ab133800_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133800 Zm00025ab133800_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab133810 Zm00025ab133810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133810 Zm00025ab133810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133810 Zm00025ab133810_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab133830 Zm00025ab133830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133830 Zm00025ab133830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab133830 Zm00025ab133830_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab133880 Zm00025ab133880_P001 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab133890 Zm00025ab133890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab133900 Zm00025ab133900_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab133900 Zm00025ab133900_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab133910 Zm00025ab133910_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab133940 Zm00025ab133940_P003 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00025ab134010 Zm00025ab134010_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00025ab134010 Zm00025ab134010_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00025ab134010 Zm00025ab134010_P003 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab134030 Zm00025ab134030_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab134030 Zm00025ab134030_P002 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab134230 Zm00025ab134230_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab134550 Zm00025ab134550_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00025ab134550 Zm00025ab134550_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab134580 Zm00025ab134580_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00025ab134600 Zm00025ab134600_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00025ab134600 Zm00025ab134600_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00025ab134600 Zm00025ab134600_P003 viridiplantae PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab134610 Zm00025ab134610_P001 expected SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab134860 Zm00025ab134860_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab134920 Zm00025ab134920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab134920 Zm00025ab134920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab134920 Zm00025ab134920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab134940 Zm00025ab134940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab134940 Zm00025ab134940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab134940 Zm00025ab134940_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab135020 Zm00025ab135020_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab135020 Zm00025ab135020_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab135020 Zm00025ab135020_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab135240 Zm00025ab135240_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab135260 Zm00025ab135260_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab135270 Zm00025ab135270_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab135410 Zm00025ab135410_P001 expected PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P002 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P003 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P004 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P004 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P005 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P005 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P005 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P006 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P006 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab135930 Zm00025ab135930_P006 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab136010 Zm00025ab136010_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab136020 Zm00025ab136020_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab136020 Zm00025ab136020_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab136040 Zm00025ab136040_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab136160 Zm00025ab136160_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab136180 Zm00025ab136180_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab136250 Zm00025ab136250_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab136250 Zm00025ab136250_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab136270 Zm00025ab136270_P003 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab136330 Zm00025ab136330_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab136330 Zm00025ab136330_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab136330 Zm00025ab136330_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab136330 Zm00025ab136330_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab136330 Zm00025ab136330_P005 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab136880 Zm00025ab136880_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab137060 Zm00025ab137060_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab137060 Zm00025ab137060_P002 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab137080 Zm00025ab137080_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab137270 Zm00025ab137270_P001 NA DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab137590 Zm00025ab137590_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab137590 Zm00025ab137590_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab137610 Zm00025ab137610_P001 NA PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00025ab137780 Zm00025ab137780_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab137990 Zm00025ab137990_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab137990 Zm00025ab137990_P002 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab138060 Zm00025ab138060_P001 NA PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab138400 Zm00025ab138400_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab138400 Zm00025ab138400_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab138400 Zm00025ab138400_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab138400 Zm00025ab138400_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab138440 Zm00025ab138440_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab138440 Zm00025ab138440_P001 conditional GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00025ab138640 Zm00025ab138640_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab138660 Zm00025ab138660_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab138660 Zm00025ab138660_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab138660 Zm00025ab138660_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab138730 Zm00025ab138730_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab138760 Zm00025ab138760_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab138760 Zm00025ab138760_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab138760 Zm00025ab138760_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab138780 Zm00025ab138780_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab138950 Zm00025ab138950_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab139130 Zm00025ab139130_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab139160 Zm00025ab139160_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab139250 Zm00025ab139250_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab139250 Zm00025ab139250_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab139250 Zm00025ab139250_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab139260 Zm00025ab139260_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab139260 Zm00025ab139260_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab139410 Zm00025ab139410_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab139450 Zm00025ab139450_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab139480 Zm00025ab139480_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab139490 Zm00025ab139490_P001 conditional PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab139690 Zm00025ab139690_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab139720 Zm00025ab139720_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab140110 Zm00025ab140110_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab140110 Zm00025ab140110_P001 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P003 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P004 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P005 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P005 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P006 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P006 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P007 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00025ab140180 Zm00025ab140180_P007 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab140270 Zm00025ab140270_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab140320 Zm00025ab140320_P001 expected PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab140500 Zm00025ab140500_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab140500 Zm00025ab140500_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab140530 Zm00025ab140530_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab140640 Zm00025ab140640_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab140830 Zm00025ab140830_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab140830 Zm00025ab140830_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab140830 Zm00025ab140830_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab140830 Zm00025ab140830_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab141070 Zm00025ab141070_P001 expected PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab141460 Zm00025ab141460_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab141460 Zm00025ab141460_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab141460 Zm00025ab141460_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab141460 Zm00025ab141460_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P006 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P007 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab141520 Zm00025ab141520_P008 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab141620 Zm00025ab141620_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab141720 Zm00025ab141720_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab141750 Zm00025ab141750_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab141750 Zm00025ab141750_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab141750 Zm00025ab141750_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab141750 Zm00025ab141750_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab141810 Zm00025ab141810_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab141810 Zm00025ab141810_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab141810 Zm00025ab141810_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab141980 Zm00025ab141980_P005 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P001 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P002 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P003 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P004 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab142020 Zm00025ab142020_P004 excluded PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00025ab142120 Zm00025ab142120_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00025ab142120 Zm00025ab142120_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab142220 Zm00025ab142220_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab142220 Zm00025ab142220_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab142220 Zm00025ab142220_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab142220 Zm00025ab142220_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab142220 Zm00025ab142220_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab142390 Zm00025ab142390_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab142390 Zm00025ab142390_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P002 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P003 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab142450 Zm00025ab142450_P003 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab142500 Zm00025ab142500_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab142520 Zm00025ab142520_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab142520 Zm00025ab142520_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab142560 Zm00025ab142560_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab142620 Zm00025ab142620_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab142620 Zm00025ab142620_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00025ab142640 Zm00025ab142640_P004 NA PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab142800 Zm00025ab142800_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab142800 Zm00025ab142800_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab142800 Zm00025ab142800_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab142800 Zm00025ab142800_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab142800 Zm00025ab142800_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab142800 Zm00025ab142800_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab142800 Zm00025ab142800_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab142800 Zm00025ab142800_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab142800 Zm00025ab142800_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab142800 Zm00025ab142800_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab142800 Zm00025ab142800_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab142800 Zm00025ab142800_P001 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab142850 Zm00025ab142850_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab142850 Zm00025ab142850_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab142850 Zm00025ab142850_P003 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab142940 Zm00025ab142940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00025ab142940 Zm00025ab142940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab142940 Zm00025ab142940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00025ab142940 Zm00025ab142940_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab142970 Zm00025ab142970_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab142990 Zm00025ab142990_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab143120 Zm00025ab143120_P001 viridiplantae PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab143130 Zm00025ab143130_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P006 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P007 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P007 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P007 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P008 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P008 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab143180 Zm00025ab143180_P008 conditional PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P003 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P004 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00025ab143210 Zm00025ab143210_P004 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab143230 Zm00025ab143230_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab143240 Zm00025ab143240_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab143310 Zm00025ab143310_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab143310 Zm00025ab143310_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab143480 Zm00025ab143480_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab143570 Zm00025ab143570_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab143570 Zm00025ab143570_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab143570 Zm00025ab143570_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab143590 Zm00025ab143590_P003 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab143600 Zm00025ab143600_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab143610 Zm00025ab143610_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P003 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P003 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab143620 Zm00025ab143620_P003 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab143690 Zm00025ab143690_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab143690 Zm00025ab143690_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P005 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P006 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab143740 Zm00025ab143740_P006 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab143890 Zm00025ab143890_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab144140 Zm00025ab144140_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab144140 Zm00025ab144140_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab144140 Zm00025ab144140_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab144140 Zm00025ab144140_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab144710 Zm00025ab144710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab144710 Zm00025ab144710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab144710 Zm00025ab144710_P001 conditional PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab144790 Zm00025ab144790_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab144790 Zm00025ab144790_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab144860 Zm00025ab144860_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab144860 Zm00025ab144860_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab144860 Zm00025ab144860_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab144860 Zm00025ab144860_P004 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00025ab144900 Zm00025ab144900_P001 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00025ab144900 Zm00025ab144900_P002 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab145020 Zm00025ab145020_P006 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab145090 Zm00025ab145090_P001 ubiquitous PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab145140 Zm00025ab145140_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab145140 Zm00025ab145140_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab145290 Zm00025ab145290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab145290 Zm00025ab145290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab145290 Zm00025ab145290_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab145300 Zm00025ab145300_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab145300 Zm00025ab145300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab145300 Zm00025ab145300_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab145460 Zm00025ab145460_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab145460 Zm00025ab145460_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab145460 Zm00025ab145460_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab145460 Zm00025ab145460_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab145540 Zm00025ab145540_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab145540 Zm00025ab145540_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab145540 Zm00025ab145540_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab145540 Zm00025ab145540_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab145630 Zm00025ab145630_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab145630 Zm00025ab145630_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab145630 Zm00025ab145630_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab145640 Zm00025ab145640_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab145640 Zm00025ab145640_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab145640 Zm00025ab145640_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab145640 Zm00025ab145640_P004 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab145640 Zm00025ab145640_P005 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab145700 Zm00025ab145700_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab145770 Zm00025ab145770_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab145910 Zm00025ab145910_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00025ab145960 Zm00025ab145960_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00025ab145960 Zm00025ab145960_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab145980 Zm00025ab145980_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab145980 Zm00025ab145980_P002 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab145980 Zm00025ab145980_P003 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab145980 Zm00025ab145980_P004 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab146050 Zm00025ab146050_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab146050 Zm00025ab146050_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab146050 Zm00025ab146050_P003 expected PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00025ab146060 Zm00025ab146060_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00025ab146060 Zm00025ab146060_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00025ab146060 Zm00025ab146060_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00025ab146060 Zm00025ab146060_P002 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00025ab146070 Zm00025ab146070_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00025ab146070 Zm00025ab146070_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146150 Zm00025ab146150_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146150 Zm00025ab146150_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146150 Zm00025ab146150_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146190 Zm00025ab146190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146190 Zm00025ab146190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146190 Zm00025ab146190_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146200 Zm00025ab146200_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146200 Zm00025ab146200_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146200 Zm00025ab146200_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146210 Zm00025ab146210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146210 Zm00025ab146210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146210 Zm00025ab146210_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146220 Zm00025ab146220_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab146240 Zm00025ab146240_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab146240 Zm00025ab146240_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab146240 Zm00025ab146240_P001 conditional PROSYN-PWY L-proline biosynthesis I PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00025ab146430 Zm00025ab146430_P001 conditional PWY-3341 L-proline biosynthesis III PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00025ab146430 Zm00025ab146430_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00025ab146430 Zm00025ab146430_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146500 Zm00025ab146500_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146500 Zm00025ab146500_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146510 Zm00025ab146510_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146510 Zm00025ab146510_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146510 Zm00025ab146510_P003 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146510 Zm00025ab146510_P004 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab146540 Zm00025ab146540_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab146860 Zm00025ab146860_P002 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab146900 Zm00025ab146900_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab146900 Zm00025ab146900_P002 conditional PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab146910 Zm00025ab146910_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab146910 Zm00025ab146910_P002 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab146910 Zm00025ab146910_P003 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab146910 Zm00025ab146910_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab146940 Zm00025ab146940_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab146940 Zm00025ab146940_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P006 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab147150 Zm00025ab147150_P006 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab147160 Zm00025ab147160_P001 viridiplantae PWY-6585 2-methylketone biosynthesis RXN-11669 EC-4.1.1.56 Zm00025ab147310 Zm00025ab147310_P001 expected PWY-6585 2-methylketone biosynthesis RXN-11669 EC-4.1.1.56 Zm00025ab147310 Zm00025ab147310_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab147470 Zm00025ab147470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab147470 Zm00025ab147470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab147470 Zm00025ab147470_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab147670 Zm00025ab147670_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab147670 Zm00025ab147670_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab147670 Zm00025ab147670_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab147800 Zm00025ab147800_P003 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab147880 Zm00025ab147880_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147920 Zm00025ab147920_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147920 Zm00025ab147920_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147940 Zm00025ab147940_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147940 Zm00025ab147940_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147950 Zm00025ab147950_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147950 Zm00025ab147950_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147950 Zm00025ab147950_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab147950 Zm00025ab147950_P004 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab147960 Zm00025ab147960_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab147960 Zm00025ab147960_P001 viridiplantae PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00025ab148040 Zm00025ab148040_P001 conditional PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00025ab148040 Zm00025ab148040_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab148470 Zm00025ab148470_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab148490 Zm00025ab148490_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab148490 Zm00025ab148490_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab148490 Zm00025ab148490_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab148490 Zm00025ab148490_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab148490 Zm00025ab148490_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab148650 Zm00025ab148650_P004 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab148670 Zm00025ab148670_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab148710 Zm00025ab148710_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab148710 Zm00025ab148710_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab148950 Zm00025ab148950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab148950 Zm00025ab148950_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab149060 Zm00025ab149060_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab149140 Zm00025ab149140_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab149140 Zm00025ab149140_P002 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab149470 Zm00025ab149470_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab149670 Zm00025ab149670_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab149670 Zm00025ab149670_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab149670 Zm00025ab149670_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P002 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P003 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P004 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P004 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P004 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P005 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P005 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab149710 Zm00025ab149710_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab149770 Zm00025ab149770_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab149770 Zm00025ab149770_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab149930 Zm00025ab149930_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab149960 Zm00025ab149960_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab150270 Zm00025ab150270_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab150290 Zm00025ab150290_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150290 Zm00025ab150290_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150290 Zm00025ab150290_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab150330 Zm00025ab150330_P003 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab150720 Zm00025ab150720_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab150720 Zm00025ab150720_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab150720 Zm00025ab150720_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab150720 Zm00025ab150720_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab150810 Zm00025ab150810_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab150810 Zm00025ab150810_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab150810 Zm00025ab150810_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab150810 Zm00025ab150810_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab150810 Zm00025ab150810_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab150810 Zm00025ab150810_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00025ab150810 Zm00025ab150810_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00025ab150810 Zm00025ab150810_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab150870 Zm00025ab150870_P001 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab150950 Zm00025ab150950_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab150950 Zm00025ab150950_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab151150 Zm00025ab151150_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab151220 Zm00025ab151220_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab151220 Zm00025ab151220_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab151410 Zm00025ab151410_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab151410 Zm00025ab151410_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab151410 Zm00025ab151410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab151410 Zm00025ab151410_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab151410 Zm00025ab151410_P001 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab151540 Zm00025ab151540_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab151550 Zm00025ab151550_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab151550 Zm00025ab151550_P002 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00025ab151620 Zm00025ab151620_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00025ab151620 Zm00025ab151620_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00025ab151620 Zm00025ab151620_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00025ab151620 Zm00025ab151620_P002 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab151660 Zm00025ab151660_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab151660 Zm00025ab151660_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab151780 Zm00025ab151780_P004 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab151800 Zm00025ab151800_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab151800 Zm00025ab151800_P003 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab152040 Zm00025ab152040_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab152040 Zm00025ab152040_P002 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab152080 Zm00025ab152080_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152150 Zm00025ab152150_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152160 Zm00025ab152160_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152170 Zm00025ab152170_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152170 Zm00025ab152170_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152170 Zm00025ab152170_P003 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00025ab152170 Zm00025ab152170_P004 conditional PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00025ab152190 Zm00025ab152190_P001 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00025ab152190 Zm00025ab152190_P002 expected PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab152350 Zm00025ab152350_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab152470 Zm00025ab152470_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab152480 Zm00025ab152480_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab152490 Zm00025ab152490_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab152500 Zm00025ab152500_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab152510 Zm00025ab152510_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab152620 Zm00025ab152620_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab152620 Zm00025ab152620_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab152620 Zm00025ab152620_P002 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab152740 Zm00025ab152740_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab152740 Zm00025ab152740_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab152740 Zm00025ab152740_P001 expected KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P005 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P005 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P006 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P006 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00025ab152780 Zm00025ab152780_P007 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00025ab152780 Zm00025ab152780_P007 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab152910 Zm00025ab152910_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab152950 Zm00025ab152950_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab152950 Zm00025ab152950_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab152950 Zm00025ab152950_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab152950 Zm00025ab152950_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle SEDOHEPTULOSE-BISPHOSPHATASE-RXN EC-3.1.3.37 Zm00025ab153070 Zm00025ab153070_P001 viridiplantae PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00025ab153100 Zm00025ab153100_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab153160 Zm00025ab153160_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab153160 Zm00025ab153160_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab153160 Zm00025ab153160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P004 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153170 Zm00025ab153170_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153180 Zm00025ab153180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153180 Zm00025ab153180_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab153390 Zm00025ab153390_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab153390 Zm00025ab153390_P001 conditional PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab153410 Zm00025ab153410_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab153450 Zm00025ab153450_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab153450 Zm00025ab153450_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab153450 Zm00025ab153450_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab153450 Zm00025ab153450_P002 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab153460 Zm00025ab153460_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab153460 Zm00025ab153460_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab153460 Zm00025ab153460_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab153460 Zm00025ab153460_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153580 Zm00025ab153580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153580 Zm00025ab153580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153620 Zm00025ab153620_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153620 Zm00025ab153620_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153630 Zm00025ab153630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab153630 Zm00025ab153630_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab153870 Zm00025ab153870_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab153990 Zm00025ab153990_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab154400 Zm00025ab154400_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab154400 Zm00025ab154400_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab154480 Zm00025ab154480_P002 ubiquitous PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab154490 Zm00025ab154490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab154550 Zm00025ab154550_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00025ab154610 Zm00025ab154610_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00025ab154610 Zm00025ab154610_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab154880 Zm00025ab154880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab154880 Zm00025ab154880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab154880 Zm00025ab154880_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab154970 Zm00025ab154970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab155080 Zm00025ab155080_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab155110 Zm00025ab155110_P004 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab155350 Zm00025ab155350_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab155350 Zm00025ab155350_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab155350 Zm00025ab155350_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab155350 Zm00025ab155350_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab155380 Zm00025ab155380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab155380 Zm00025ab155380_P002 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab155430 Zm00025ab155430_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab155430 Zm00025ab155430_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab155580 Zm00025ab155580_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab155580 Zm00025ab155580_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab155590 Zm00025ab155590_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab155590 Zm00025ab155590_P002 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P002 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P003 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P003 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P004 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab155740 Zm00025ab155740_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab155830 Zm00025ab155830_P001 viridiplantae PWY-5272 abscisic acid degradation by glucosylation RXN-8155 EC-2.4.1.263 Zm00025ab155880 Zm00025ab155880_P001 expected PWY-5272 abscisic acid degradation by glucosylation RXN-8155 EC-2.4.1.263 Zm00025ab155880 Zm00025ab155880_P002 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab155900 Zm00025ab155900_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00025ab156010 Zm00025ab156010_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00025ab156010 Zm00025ab156010_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00025ab156010 Zm00025ab156010_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00025ab156010 Zm00025ab156010_P002 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab156110 Zm00025ab156110_P001 conditional PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P001 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P002 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P002 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P003 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P003 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P004 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P004 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P005 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P005 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P005 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P006 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P006 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00025ab156320 Zm00025ab156320_P006 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00025ab156500 Zm00025ab156500_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00025ab156500 Zm00025ab156500_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00025ab156500 Zm00025ab156500_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4392 EC-2.7.8.5 Zm00025ab156500 Zm00025ab156500_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab156590 Zm00025ab156590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab156590 Zm00025ab156590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab156590 Zm00025ab156590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P005 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P005 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab156600 Zm00025ab156600_P005 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab156720 Zm00025ab156720_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab156730 Zm00025ab156730_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab156730 Zm00025ab156730_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab156860 Zm00025ab156860_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab156860 Zm00025ab156860_P002 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab156890 Zm00025ab156890_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab156910 Zm00025ab156910_P002 NA PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00025ab157100 Zm00025ab157100_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00025ab157100 Zm00025ab157100_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00025ab157120 Zm00025ab157120_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00025ab157120 Zm00025ab157120_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab157160 Zm00025ab157160_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab157160 Zm00025ab157160_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab157160 Zm00025ab157160_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab157160 Zm00025ab157160_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab157320 Zm00025ab157320_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab157320 Zm00025ab157320_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab157320 Zm00025ab157320_P003 ubiquitous PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab157570 Zm00025ab157570_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab157620 Zm00025ab157620_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab157620 Zm00025ab157620_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab157620 Zm00025ab157620_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab157730 Zm00025ab157730_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab157730 Zm00025ab157730_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab157730 Zm00025ab157730_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab157790 Zm00025ab157790_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab157790 Zm00025ab157790_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab157790 Zm00025ab157790_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab157990 Zm00025ab157990_P006 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P005 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P005 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P005 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P005 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab158040 Zm00025ab158040_P005 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab158060 Zm00025ab158060_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab158070 Zm00025ab158070_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab158070 Zm00025ab158070_P002 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab158330 Zm00025ab158330_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab158350 Zm00025ab158350_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab158350 Zm00025ab158350_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab158350 Zm00025ab158350_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab158510 Zm00025ab158510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab158510 Zm00025ab158510_P005 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab158540 Zm00025ab158540_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab158610 Zm00025ab158610_P006 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13643 EC-1.13.11.69 Zm00025ab158650 Zm00025ab158650_P001 conditional PWY-6806 carotenoid cleavage RXN-12393 EC-1.13.11.70 Zm00025ab158650 Zm00025ab158650_P001 expected PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00025ab158690 Zm00025ab158690_P001 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00025ab158690 Zm00025ab158690_P002 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00025ab158690 Zm00025ab158690_P003 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab158870 Zm00025ab158870_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab158870 Zm00025ab158870_P002 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab158880 Zm00025ab158880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab158880 Zm00025ab158880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab158880 Zm00025ab158880_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab158880 Zm00025ab158880_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab158890 Zm00025ab158890_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab158890 Zm00025ab158890_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab158980 Zm00025ab158980_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab159110 Zm00025ab159110_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab159110 Zm00025ab159110_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab159110 Zm00025ab159110_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab159110 Zm00025ab159110_P002 viridiplantae NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00025ab159140 Zm00025ab159140_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00025ab159140 Zm00025ab159140_P002 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab159230 Zm00025ab159230_P001 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab159340 Zm00025ab159340_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab159400 Zm00025ab159400_P001 expected PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab159450 Zm00025ab159450_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab159540 Zm00025ab159540_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab159590 Zm00025ab159590_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00025ab160020 Zm00025ab160020_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab160120 Zm00025ab160120_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab160120 Zm00025ab160120_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab160120 Zm00025ab160120_P003 expected PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab160270 Zm00025ab160270_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab160310 Zm00025ab160310_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab160310 Zm00025ab160310_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab160310 Zm00025ab160310_P001 manual PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab160340 Zm00025ab160340_P003 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab160510 Zm00025ab160510_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab160510 Zm00025ab160510_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab160550 Zm00025ab160550_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab160550 Zm00025ab160550_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab160550 Zm00025ab160550_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab160550 Zm00025ab160550_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab160610 Zm00025ab160610_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00025ab160660 Zm00025ab160660_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab160660 Zm00025ab160660_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab160660 Zm00025ab160660_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00025ab160660 Zm00025ab160660_P002 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab160660 Zm00025ab160660_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab160660 Zm00025ab160660_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab160700 Zm00025ab160700_P001 viridiplantae PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00025ab160930 Zm00025ab160930_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00025ab160930 Zm00025ab160930_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00025ab160930 Zm00025ab160930_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab160950 Zm00025ab160950_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab160950 Zm00025ab160950_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab160950 Zm00025ab160950_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab160960 Zm00025ab160960_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab160990 Zm00025ab160990_P004 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab161160 Zm00025ab161160_P001 expected PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab161410 Zm00025ab161410_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab161410 Zm00025ab161410_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P003 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab161410 Zm00025ab161410_P003 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab161410 Zm00025ab161410_P003 viridiplantae PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00025ab161470 Zm00025ab161470_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00025ab161470 Zm00025ab161470_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00025ab161470 Zm00025ab161470_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00025ab161470 Zm00025ab161470_P002 expected PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P005 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P006 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P006 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P006 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab161690 Zm00025ab161690_P006 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab161810 Zm00025ab161810_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab161890 Zm00025ab161890_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab161930 Zm00025ab161930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab161930 Zm00025ab161930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab161930 Zm00025ab161930_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab161960 Zm00025ab161960_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab161960 Zm00025ab161960_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab161960 Zm00025ab161960_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab161970 Zm00025ab161970_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab161970 Zm00025ab161970_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab161970 Zm00025ab161970_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab161980 Zm00025ab161980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab161980 Zm00025ab161980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab161980 Zm00025ab161980_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab162010 Zm00025ab162010_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab162030 Zm00025ab162030_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab162180 Zm00025ab162180_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00025ab162180 Zm00025ab162180_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab162300 Zm00025ab162300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab162300 Zm00025ab162300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab162300 Zm00025ab162300_P001 conditional PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab162390 Zm00025ab162390_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab162390 Zm00025ab162390_P002 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab162420 Zm00025ab162420_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab162420 Zm00025ab162420_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab162420 Zm00025ab162420_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab162420 Zm00025ab162420_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab162470 Zm00025ab162470_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab162480 Zm00025ab162480_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab162480 Zm00025ab162480_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab162480 Zm00025ab162480_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab162480 Zm00025ab162480_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab162480 Zm00025ab162480_P002 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab162480 Zm00025ab162480_P002 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab162610 Zm00025ab162610_P001 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab162730 Zm00025ab162730_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab162730 Zm00025ab162730_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab162930 Zm00025ab162930_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab162930 Zm00025ab162930_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab162930 Zm00025ab162930_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab163150 Zm00025ab163150_P002 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab163200 Zm00025ab163200_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab163250 Zm00025ab163250_P001 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab163300 Zm00025ab163300_P001 expected PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00025ab163370 Zm00025ab163370_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P004 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00025ab163430 Zm00025ab163430_P005 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab163590 Zm00025ab163590_P003 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab163600 Zm00025ab163600_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab163650 Zm00025ab163650_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab163650 Zm00025ab163650_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab163650 Zm00025ab163650_P003 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab163650 Zm00025ab163650_P004 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab163670 Zm00025ab163670_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab163830 Zm00025ab163830_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab163830 Zm00025ab163830_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab163840 Zm00025ab163840_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab163880 Zm00025ab163880_P001 NA PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab163890 Zm00025ab163890_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab163890 Zm00025ab163890_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab163930 Zm00025ab163930_P004 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab164030 Zm00025ab164030_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab164030 Zm00025ab164030_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab164030 Zm00025ab164030_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab164030 Zm00025ab164030_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab164080 Zm00025ab164080_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab164080 Zm00025ab164080_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164090 Zm00025ab164090_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164090 Zm00025ab164090_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164090 Zm00025ab164090_P003 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab164110 Zm00025ab164110_P002 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164130 Zm00025ab164130_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164140 Zm00025ab164140_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164140 Zm00025ab164140_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164140 Zm00025ab164140_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164140 Zm00025ab164140_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164140 Zm00025ab164140_P005 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00025ab164150 Zm00025ab164150_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164160 Zm00025ab164160_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164160 Zm00025ab164160_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164160 Zm00025ab164160_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164170 Zm00025ab164170_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164180 Zm00025ab164180_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab164180 Zm00025ab164180_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164190 Zm00025ab164190_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164190 Zm00025ab164190_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164190 Zm00025ab164190_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164190 Zm00025ab164190_P002 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab164200 Zm00025ab164200_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164200 Zm00025ab164200_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab164200 Zm00025ab164200_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab164260 Zm00025ab164260_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab164260 Zm00025ab164260_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab164260 Zm00025ab164260_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab164320 Zm00025ab164320_P003 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab164520 Zm00025ab164520_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab164520 Zm00025ab164520_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab164520 Zm00025ab164520_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab164520 Zm00025ab164520_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab164540 Zm00025ab164540_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab164570 Zm00025ab164570_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab164570 Zm00025ab164570_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab164580 Zm00025ab164580_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab164600 Zm00025ab164600_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab164650 Zm00025ab164650_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab164650 Zm00025ab164650_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab164660 Zm00025ab164660_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab164680 Zm00025ab164680_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab164680 Zm00025ab164680_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab164680 Zm00025ab164680_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00025ab164680 Zm00025ab164680_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00025ab164680 Zm00025ab164680_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00025ab164680 Zm00025ab164680_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab164720 Zm00025ab164720_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab164830 Zm00025ab164830_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab164830 Zm00025ab164830_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab164870 Zm00025ab164870_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab164870 Zm00025ab164870_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab164870 Zm00025ab164870_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab164870 Zm00025ab164870_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab164870 Zm00025ab164870_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab164960 Zm00025ab164960_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab164960 Zm00025ab164960_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab164960 Zm00025ab164960_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab164960 Zm00025ab164960_P001 NA PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab165010 Zm00025ab165010_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab165010 Zm00025ab165010_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab165010 Zm00025ab165010_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab165340 Zm00025ab165340_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab165340 Zm00025ab165340_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab165340 Zm00025ab165340_P003 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab165450 Zm00025ab165450_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab165600 Zm00025ab165600_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P004 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P005 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab165660 Zm00025ab165660_P006 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab165710 Zm00025ab165710_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab165710 Zm00025ab165710_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab165710 Zm00025ab165710_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab165710 Zm00025ab165710_P004 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab165710 Zm00025ab165710_P005 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab165770 Zm00025ab165770_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab165770 Zm00025ab165770_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab165770 Zm00025ab165770_P003 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab166010 Zm00025ab166010_P001 conditional PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab166020 Zm00025ab166020_P002 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab166200 Zm00025ab166200_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166420 Zm00025ab166420_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166420 Zm00025ab166420_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166420 Zm00025ab166420_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166420 Zm00025ab166420_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166420 Zm00025ab166420_P001 excluded PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab166520 Zm00025ab166520_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab166530 Zm00025ab166530_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166740 Zm00025ab166740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166780 Zm00025ab166780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166780 Zm00025ab166780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166780 Zm00025ab166780_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166780 Zm00025ab166780_P004 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166880 Zm00025ab166880_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166880 Zm00025ab166880_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166880 Zm00025ab166880_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166880 Zm00025ab166880_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166880 Zm00025ab166880_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166890 Zm00025ab166890_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166890 Zm00025ab166890_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166890 Zm00025ab166890_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166890 Zm00025ab166890_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166890 Zm00025ab166890_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166940 Zm00025ab166940_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166940 Zm00025ab166940_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166940 Zm00025ab166940_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166940 Zm00025ab166940_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab166940 Zm00025ab166940_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166980 Zm00025ab166980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab166980 Zm00025ab166980_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab167090 Zm00025ab167090_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab167090 Zm00025ab167090_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P003 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00025ab167310 Zm00025ab167310_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab167870 Zm00025ab167870_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab167870 Zm00025ab167870_P002 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab167920 Zm00025ab167920_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab167930 Zm00025ab167930_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab168110 Zm00025ab168110_P005 expected PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00025ab168230 Zm00025ab168230_P001 ubiquitous GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00025ab168290 Zm00025ab168290_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab168400 Zm00025ab168400_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab168400 Zm00025ab168400_P001 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab168410 Zm00025ab168410_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab168440 Zm00025ab168440_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab168440 Zm00025ab168440_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab168440 Zm00025ab168440_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab168640 Zm00025ab168640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab168720 Zm00025ab168720_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P005 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab168880 Zm00025ab168880_P006 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab168980 Zm00025ab168980_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab168980 Zm00025ab168980_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab168980 Zm00025ab168980_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab169000 Zm00025ab169000_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab169000 Zm00025ab169000_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab169000 Zm00025ab169000_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab169020 Zm00025ab169020_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab169030 Zm00025ab169030_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab169320 Zm00025ab169320_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab169340 Zm00025ab169340_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab169350 Zm00025ab169350_P001 viridiplantae PWY-5139 pelargonidin conjugates biosynthesis RXN-7832 EC-2.4.1.116 Zm00025ab169510 Zm00025ab169510_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00025ab169650 Zm00025ab169650_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00025ab169650 Zm00025ab169650_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00025ab169650 Zm00025ab169650_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab169860 Zm00025ab169860_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab170050 Zm00025ab170050_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab170050 Zm00025ab170050_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab170060 Zm00025ab170060_P002 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab170250 Zm00025ab170250_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab170250 Zm00025ab170250_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab170250 Zm00025ab170250_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab170360 Zm00025ab170360_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00025ab170380 Zm00025ab170380_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00025ab170380 Zm00025ab170380_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab170470 Zm00025ab170470_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab171000 Zm00025ab171000_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab171000 Zm00025ab171000_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab171000 Zm00025ab171000_P003 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab171230 Zm00025ab171230_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab171230 Zm00025ab171230_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab171310 Zm00025ab171310_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab171320 Zm00025ab171320_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab171320 Zm00025ab171320_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab171320 Zm00025ab171320_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab171320 Zm00025ab171320_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab171330 Zm00025ab171330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab171330 Zm00025ab171330_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab171350 Zm00025ab171350_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab171740 Zm00025ab171740_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab171740 Zm00025ab171740_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab171750 Zm00025ab171750_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab171750 Zm00025ab171750_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab171840 Zm00025ab171840_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab171850 Zm00025ab171850_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab171850 Zm00025ab171850_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab171850 Zm00025ab171850_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab171850 Zm00025ab171850_P002 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab171870 Zm00025ab171870_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab171900 Zm00025ab171900_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab171900 Zm00025ab171900_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab172000 Zm00025ab172000_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab172000 Zm00025ab172000_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab172110 Zm00025ab172110_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab172110 Zm00025ab172110_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00025ab172120 Zm00025ab172120_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab172120 Zm00025ab172120_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab172120 Zm00025ab172120_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab172200 Zm00025ab172200_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00025ab172230 Zm00025ab172230_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab172240 Zm00025ab172240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab172240 Zm00025ab172240_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab172310 Zm00025ab172310_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab172310 Zm00025ab172310_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab172310 Zm00025ab172310_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab172310 Zm00025ab172310_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab172310 Zm00025ab172310_P001 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab172410 Zm00025ab172410_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab172550 Zm00025ab172550_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab172550 Zm00025ab172550_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab172600 Zm00025ab172600_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab172600 Zm00025ab172600_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab172600 Zm00025ab172600_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab172600 Zm00025ab172600_P004 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab172980 Zm00025ab172980_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab172990 Zm00025ab172990_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab172990 Zm00025ab172990_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab172990 Zm00025ab172990_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab172990 Zm00025ab172990_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab173020 Zm00025ab173020_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab173020 Zm00025ab173020_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab173020 Zm00025ab173020_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab173020 Zm00025ab173020_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab173180 Zm00025ab173180_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab173180 Zm00025ab173180_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab173180 Zm00025ab173180_P001 NA PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173240 Zm00025ab173240_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173240 Zm00025ab173240_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173240 Zm00025ab173240_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173260 Zm00025ab173260_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173260 Zm00025ab173260_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173260 Zm00025ab173260_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173280 Zm00025ab173280_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173280 Zm00025ab173280_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab173280 Zm00025ab173280_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab173390 Zm00025ab173390_P002 NA PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab173570 Zm00025ab173570_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab173660 Zm00025ab173660_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab173710 Zm00025ab173710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab173710 Zm00025ab173710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab173710 Zm00025ab173710_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab173780 Zm00025ab173780_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab173840 Zm00025ab173840_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab173940 Zm00025ab173940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab173940 Zm00025ab173940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab173940 Zm00025ab173940_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00025ab173950 Zm00025ab173950_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00025ab173950 Zm00025ab173950_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00025ab173950 Zm00025ab173950_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00025ab173950 Zm00025ab173950_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab174040 Zm00025ab174040_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab174040 Zm00025ab174040_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab174040 Zm00025ab174040_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab174040 Zm00025ab174040_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab174090 Zm00025ab174090_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab174090 Zm00025ab174090_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab174310 Zm00025ab174310_P003 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab174470 Zm00025ab174470_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab174480 Zm00025ab174480_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab174490 Zm00025ab174490_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab174650 Zm00025ab174650_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab174650 Zm00025ab174650_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab174730 Zm00025ab174730_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab174730 Zm00025ab174730_P002 ubiquitous PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab174790 Zm00025ab174790_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab174790 Zm00025ab174790_P002 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00025ab174860 Zm00025ab174860_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00025ab174860 Zm00025ab174860_P002 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00025ab174860 Zm00025ab174860_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab174880 Zm00025ab174880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab174880 Zm00025ab174880_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab174990 Zm00025ab174990_P004 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab175000 Zm00025ab175000_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab175000 Zm00025ab175000_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab175000 Zm00025ab175000_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab175000 Zm00025ab175000_P002 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00025ab175010 Zm00025ab175010_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab175030 Zm00025ab175030_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab175060 Zm00025ab175060_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab175070 Zm00025ab175070_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab175130 Zm00025ab175130_P004 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab175200 Zm00025ab175200_P002 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00025ab175270 Zm00025ab175270_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00025ab175270 Zm00025ab175270_P002 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab175430 Zm00025ab175430_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab175430 Zm00025ab175430_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab175430 Zm00025ab175430_P003 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab175500 Zm00025ab175500_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab175500 Zm00025ab175500_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00025ab175500 Zm00025ab175500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab175510 Zm00025ab175510_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab175530 Zm00025ab175530_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab175530 Zm00025ab175530_P001 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab175780 Zm00025ab175780_P001 excluded PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00025ab175790 Zm00025ab175790_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00025ab175790 Zm00025ab175790_P002 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00025ab175800 Zm00025ab175800_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab175840 Zm00025ab175840_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P003 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P004 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P004 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P004 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P004 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P005 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P005 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P005 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P005 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P005 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P005 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P005 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P006 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P006 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P006 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P006 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P006 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P006 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P006 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P006 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P007 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P007 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P007 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P007 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P007 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P007 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P007 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P007 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P008 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P008 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P008 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P008 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P008 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P008 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P008 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P008 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P009 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P009 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab175850 Zm00025ab175850_P009 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P009 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P009 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P009 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P009 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00025ab175850 Zm00025ab175850_P009 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00025ab175880 Zm00025ab175880_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab175920 Zm00025ab175920_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab175960 Zm00025ab175960_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab175980 Zm00025ab175980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab175980 Zm00025ab175980_P002 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab175990 Zm00025ab175990_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab176020 Zm00025ab176020_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab176020 Zm00025ab176020_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab176020 Zm00025ab176020_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab176020 Zm00025ab176020_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab176060 Zm00025ab176060_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab176060 Zm00025ab176060_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab176060 Zm00025ab176060_P003 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab176190 Zm00025ab176190_P001 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176250 Zm00025ab176250_P002 excluded PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab176270 Zm00025ab176270_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab176270 Zm00025ab176270_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab176270 Zm00025ab176270_P002 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00025ab176270 Zm00025ab176270_P002 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab176500 Zm00025ab176500_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab176500 Zm00025ab176500_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab176510 Zm00025ab176510_P001 viridiplantae PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00025ab176530 Zm00025ab176530_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00025ab176530 Zm00025ab176530_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab176590 Zm00025ab176590_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab176590 Zm00025ab176590_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab176590 Zm00025ab176590_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab176640 Zm00025ab176640_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab176670 Zm00025ab176670_P001 ubiquitous PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab176690 Zm00025ab176690_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab176690 Zm00025ab176690_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab176750 Zm00025ab176750_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab176750 Zm00025ab176750_P001 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176870 Zm00025ab176870_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176870 Zm00025ab176870_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176870 Zm00025ab176870_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176870 Zm00025ab176870_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab176870 Zm00025ab176870_P001 excluded PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab176990 Zm00025ab176990_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab176990 Zm00025ab176990_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab177040 Zm00025ab177040_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab177040 Zm00025ab177040_P002 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab177080 Zm00025ab177080_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00025ab177230 Zm00025ab177230_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P002 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P003 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab177420 Zm00025ab177420_P003 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P003 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab177420 Zm00025ab177420_P003 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab177560 Zm00025ab177560_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab177840 Zm00025ab177840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab177840 Zm00025ab177840_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab177840 Zm00025ab177840_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab177840 Zm00025ab177840_P004 NA PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab177940 Zm00025ab177940_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab177990 Zm00025ab177990_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab178270 Zm00025ab178270_P002 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab178310 Zm00025ab178310_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab178310 Zm00025ab178310_P002 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab178440 Zm00025ab178440_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab178480 Zm00025ab178480_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 expected PWY-7186 superpathway of scopolin and esculin biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1143 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 conditional PWY-5868 simple coumarins biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 NA PWY-2181 free phenylpropanoid acid biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 conditional PWY-5168 ferulate and sinapate biosynthesis RXN-1143 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 expected PWY-7186 superpathway of scopolin and esculin biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1143 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 conditional PWY-5868 simple coumarins biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 NA PWY-2181 free phenylpropanoid acid biosynthesis RXN-1104 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 conditional PWY-5168 ferulate and sinapate biosynthesis RXN-1143 EC-2.1.1.68 Zm00025ab178510 Zm00025ab178510_P002 conditional PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab178790 Zm00025ab178790_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab178790 Zm00025ab178790_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab178900 Zm00025ab178900_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab178900 Zm00025ab178900_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab178900 Zm00025ab178900_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab178900 Zm00025ab178900_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab179010 Zm00025ab179010_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab179010 Zm00025ab179010_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab179010 Zm00025ab179010_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab179070 Zm00025ab179070_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab179070 Zm00025ab179070_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab179080 Zm00025ab179080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00025ab179080 Zm00025ab179080_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00025ab179160 Zm00025ab179160_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab179190 Zm00025ab179190_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab179280 Zm00025ab179280_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab179280 Zm00025ab179280_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab179280 Zm00025ab179280_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab179280 Zm00025ab179280_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab179350 Zm00025ab179350_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab179350 Zm00025ab179350_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab179350 Zm00025ab179350_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab179350 Zm00025ab179350_P001 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P004 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab179580 Zm00025ab179580_P005 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab179650 Zm00025ab179650_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab179710 Zm00025ab179710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab179710 Zm00025ab179710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab179710 Zm00025ab179710_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab179960 Zm00025ab179960_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab180210 Zm00025ab180210_P005 conditional PWY-5098 chlorophyll a degradation I 3.1.1.82-RXN EC-3.1.1.82 Zm00025ab180230 Zm00025ab180230_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab180410 Zm00025ab180410_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab180480 Zm00025ab180480_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab180480 Zm00025ab180480_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab180480 Zm00025ab180480_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab180480 Zm00025ab180480_P004 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab180630 Zm00025ab180630_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab180630 Zm00025ab180630_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab180880 Zm00025ab180880_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab181120 Zm00025ab181120_P001 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab181250 Zm00025ab181250_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab181250 Zm00025ab181250_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab181250 Zm00025ab181250_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab181250 Zm00025ab181250_P004 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00025ab181480 Zm00025ab181480_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00025ab181480 Zm00025ab181480_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab181710 Zm00025ab181710_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab181710 Zm00025ab181710_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab181710 Zm00025ab181710_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab181710 Zm00025ab181710_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab181710 Zm00025ab181710_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab181740 Zm00025ab181740_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab181740 Zm00025ab181740_P002 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab181760 Zm00025ab181760_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab181760 Zm00025ab181760_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab181760 Zm00025ab181760_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab181760 Zm00025ab181760_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00025ab181790 Zm00025ab181790_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab181990 Zm00025ab181990_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab182110 Zm00025ab182110_P002 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P002 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P003 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P004 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P005 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00025ab182130 Zm00025ab182130_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab182290 Zm00025ab182290_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab182290 Zm00025ab182290_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00025ab182290 Zm00025ab182290_P001 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab182310 Zm00025ab182310_P004 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab182360 Zm00025ab182360_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab182360 Zm00025ab182360_P002 viridiplantae PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00025ab182390 Zm00025ab182390_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-4882 EC-4.2.3.33 Zm00025ab182400 Zm00025ab182400_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-4884 EC-4.2.3.29 Zm00025ab182400 Zm00025ab182400_P002 conditional PWY-6257 curcumene biosynthesis RXN-10599 EC-4.2.3.94 Zm00025ab182400 Zm00025ab182400_P002 conditional PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P002 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab182500 Zm00025ab182500_P002 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab182610 Zm00025ab182610_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab182610 Zm00025ab182610_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab182610 Zm00025ab182610_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab182710 Zm00025ab182710_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab182710 Zm00025ab182710_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab182780 Zm00025ab182780_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab182780 Zm00025ab182780_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab182790 Zm00025ab182790_P005 expected PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P002 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P003 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P004 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P005 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00025ab182940 Zm00025ab182940_P006 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab182990 Zm00025ab182990_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab182990 Zm00025ab182990_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab183040 Zm00025ab183040_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab183040 Zm00025ab183040_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab183250 Zm00025ab183250_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab183370 Zm00025ab183370_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab183400 Zm00025ab183400_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab183400 Zm00025ab183400_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab183400 Zm00025ab183400_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab183400 Zm00025ab183400_P004 expected PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00025ab183550 Zm00025ab183550_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab183610 Zm00025ab183610_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab183610 Zm00025ab183610_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab183610 Zm00025ab183610_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab183740 Zm00025ab183740_P004 conditional HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab183820 Zm00025ab183820_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab183820 Zm00025ab183820_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab183820 Zm00025ab183820_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab183830 Zm00025ab183830_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab183830 Zm00025ab183830_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab183830 Zm00025ab183830_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab183940 Zm00025ab183940_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab183940 Zm00025ab183940_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab183940 Zm00025ab183940_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab183940 Zm00025ab183940_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab183950 Zm00025ab183950_P001 expected PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00025ab184020 Zm00025ab184020_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00025ab184020 Zm00025ab184020_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab184030 Zm00025ab184030_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab184200 Zm00025ab184200_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab184210 Zm00025ab184210_P001 expected PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab184320 Zm00025ab184320_P001 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab184570 Zm00025ab184570_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab184570 Zm00025ab184570_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab184720 Zm00025ab184720_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab184730 Zm00025ab184730_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab184770 Zm00025ab184770_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab185100 Zm00025ab185100_P001 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab185200 Zm00025ab185200_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab185200 Zm00025ab185200_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab185310 Zm00025ab185310_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab185310 Zm00025ab185310_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab185310 Zm00025ab185310_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab185310 Zm00025ab185310_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab185310 Zm00025ab185310_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab185310 Zm00025ab185310_P003 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab185510 Zm00025ab185510_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab185510 Zm00025ab185510_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab185510 Zm00025ab185510_P001 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P001 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P002 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P002 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P003 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P003 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P004 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P004 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P005 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab185600 Zm00025ab185600_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab185620 Zm00025ab185620_P006 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab185630 Zm00025ab185630_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab185630 Zm00025ab185630_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab185630 Zm00025ab185630_P003 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab185630 Zm00025ab185630_P004 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab185840 Zm00025ab185840_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab186020 Zm00025ab186020_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab186020 Zm00025ab186020_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P004 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab186190 Zm00025ab186190_P005 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab186220 Zm00025ab186220_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab186220 Zm00025ab186220_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab186220 Zm00025ab186220_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab186240 Zm00025ab186240_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00025ab186270 Zm00025ab186270_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00025ab186270 Zm00025ab186270_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00025ab186270 Zm00025ab186270_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab186380 Zm00025ab186380_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab186380 Zm00025ab186380_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab186420 Zm00025ab186420_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab186470 Zm00025ab186470_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186670 Zm00025ab186670_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186680 Zm00025ab186680_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186680 Zm00025ab186680_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab186680 Zm00025ab186680_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab186740 Zm00025ab186740_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab186740 Zm00025ab186740_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab186740 Zm00025ab186740_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab186850 Zm00025ab186850_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab186890 Zm00025ab186890_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab187300 Zm00025ab187300_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab187300 Zm00025ab187300_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab187320 Zm00025ab187320_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab187680 Zm00025ab187680_P002 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab187700 Zm00025ab187700_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab187700 Zm00025ab187700_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab187780 Zm00025ab187780_P004 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P006 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188200 Zm00025ab188200_P007 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab188260 Zm00025ab188260_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab188260 Zm00025ab188260_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab188930 Zm00025ab188930_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab188940 Zm00025ab188940_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab188940 Zm00025ab188940_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab188940 Zm00025ab188940_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab189430 Zm00025ab189430_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab189430 Zm00025ab189430_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab189430 Zm00025ab189430_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab189430 Zm00025ab189430_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab189430 Zm00025ab189430_P001 viridiplantae PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P002 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P003 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P003 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab189600 Zm00025ab189600_P003 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P003 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P004 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab189710 Zm00025ab189710_P005 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab189930 Zm00025ab189930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab189930 Zm00025ab189930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab189930 Zm00025ab189930_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab190020 Zm00025ab190020_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab190020 Zm00025ab190020_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab190020 Zm00025ab190020_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab190020 Zm00025ab190020_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab190020 Zm00025ab190020_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab190020 Zm00025ab190020_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab190020 Zm00025ab190020_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab190020 Zm00025ab190020_P004 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00025ab190160 Zm00025ab190160_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab190240 Zm00025ab190240_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab190240 Zm00025ab190240_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab190240 Zm00025ab190240_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab190270 Zm00025ab190270_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab190270 Zm00025ab190270_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab190270 Zm00025ab190270_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab190390 Zm00025ab190390_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab190630 Zm00025ab190630_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab190800 Zm00025ab190800_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab191080 Zm00025ab191080_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab191260 Zm00025ab191260_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab191260 Zm00025ab191260_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab191260 Zm00025ab191260_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab191280 Zm00025ab191280_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab191280 Zm00025ab191280_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab191280 Zm00025ab191280_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab191280 Zm00025ab191280_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab191280 Zm00025ab191280_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab191280 Zm00025ab191280_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab191280 Zm00025ab191280_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab191280 Zm00025ab191280_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab191280 Zm00025ab191280_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab191280 Zm00025ab191280_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab191280 Zm00025ab191280_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab191280 Zm00025ab191280_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab191290 Zm00025ab191290_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab191300 Zm00025ab191300_P004 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab191390 Zm00025ab191390_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab191390 Zm00025ab191390_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab191390 Zm00025ab191390_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab191390 Zm00025ab191390_P002 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab191570 Zm00025ab191570_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P004 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P005 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab191680 Zm00025ab191680_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab191690 Zm00025ab191690_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab191690 Zm00025ab191690_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab191690 Zm00025ab191690_P003 NA PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.71-RXN EC-2.1.1.71 Zm00025ab191730 Zm00025ab191730_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.71-RXN EC-2.1.1.71 Zm00025ab191730 Zm00025ab191730_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV RXN4FS-2 EC-2.1.1.71 Zm00025ab191730 Zm00025ab191730_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P003 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P004 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P005 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P006 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab191800 Zm00025ab191800_P007 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab192070 Zm00025ab192070_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab192130 Zm00025ab192130_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab192130 Zm00025ab192130_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab192130 Zm00025ab192130_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab192150 Zm00025ab192150_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab192150 Zm00025ab192150_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab192150 Zm00025ab192150_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab192150 Zm00025ab192150_P004 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab192180 Zm00025ab192180_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab192180 Zm00025ab192180_P001 NA PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00025ab192190 Zm00025ab192190_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00025ab192190 Zm00025ab192190_P002 conditional PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab192320 Zm00025ab192320_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab192320 Zm00025ab192320_P002 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P002 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P003 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P003 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab192520 Zm00025ab192520_P003 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab192540 Zm00025ab192540_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab192540 Zm00025ab192540_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab192540 Zm00025ab192540_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00025ab192640 Zm00025ab192640_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00025ab192640 Zm00025ab192640_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00025ab192640 Zm00025ab192640_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P005 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab192710 Zm00025ab192710_P006 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab192870 Zm00025ab192870_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab193310 Zm00025ab193310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab193310 Zm00025ab193310_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab193310 Zm00025ab193310_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab193310 Zm00025ab193310_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab193310 Zm00025ab193310_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab193350 Zm00025ab193350_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab193360 Zm00025ab193360_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab193360 Zm00025ab193360_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab193440 Zm00025ab193440_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab193440 Zm00025ab193440_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab193440 Zm00025ab193440_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab193440 Zm00025ab193440_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00025ab193540 Zm00025ab193540_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00025ab193540 Zm00025ab193540_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00025ab193540 Zm00025ab193540_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00025ab193540 Zm00025ab193540_P004 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00025ab193540 Zm00025ab193540_P005 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab193620 Zm00025ab193620_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab193630 Zm00025ab193630_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab193650 Zm00025ab193650_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00025ab193650 Zm00025ab193650_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab193880 Zm00025ab193880_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00025ab194020 Zm00025ab194020_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00025ab194020 Zm00025ab194020_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P003 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab194020 Zm00025ab194020_P003 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab194120 Zm00025ab194120_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab194130 Zm00025ab194130_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab194210 Zm00025ab194210_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab194210 Zm00025ab194210_P002 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00025ab194580 Zm00025ab194580_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00025ab194580 Zm00025ab194580_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00025ab194720 Zm00025ab194720_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00025ab194720 Zm00025ab194720_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P002 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P003 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab195240 Zm00025ab195240_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab195250 Zm00025ab195250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab195250 Zm00025ab195250_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab195250 Zm00025ab195250_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab195370 Zm00025ab195370_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab195370 Zm00025ab195370_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab195370 Zm00025ab195370_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab195370 Zm00025ab195370_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195430 Zm00025ab195430_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195440 Zm00025ab195440_P001 NA CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab195470 Zm00025ab195470_P002 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab195490 Zm00025ab195490_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab195490 Zm00025ab195490_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab195490 Zm00025ab195490_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab195490 Zm00025ab195490_P004 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab195500 Zm00025ab195500_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab195520 Zm00025ab195520_P001 NA PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00025ab195590 Zm00025ab195590_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195640 Zm00025ab195640_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195650 Zm00025ab195650_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab195660 Zm00025ab195660_P001 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab195660 Zm00025ab195660_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab195790 Zm00025ab195790_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P002 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P003 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab195870 Zm00025ab195870_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195900 Zm00025ab195900_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195900 Zm00025ab195900_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab195900 Zm00025ab195900_P003 NA PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab196030 Zm00025ab196030_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab196030 Zm00025ab196030_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab196030 Zm00025ab196030_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab196030 Zm00025ab196030_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab196030 Zm00025ab196030_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab196030 Zm00025ab196030_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab196030 Zm00025ab196030_P004 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab196030 Zm00025ab196030_P004 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab196030 Zm00025ab196030_P005 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab196030 Zm00025ab196030_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab196170 Zm00025ab196170_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab196190 Zm00025ab196190_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab196210 Zm00025ab196210_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab196220 Zm00025ab196220_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab196220 Zm00025ab196220_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab196220 Zm00025ab196220_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab196280 Zm00025ab196280_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00025ab196370 Zm00025ab196370_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab196470 Zm00025ab196470_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab196580 Zm00025ab196580_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab196580 Zm00025ab196580_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOSAMINEPNACETYLTRANS-RXN EC-2.3.1.4 Zm00025ab196600 Zm00025ab196600_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab197280 Zm00025ab197280_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab197290 Zm00025ab197290_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab197290 Zm00025ab197290_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab197290 Zm00025ab197290_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab197450 Zm00025ab197450_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab197450 Zm00025ab197450_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab197450 Zm00025ab197450_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab197580 Zm00025ab197580_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab197580 Zm00025ab197580_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab197580 Zm00025ab197580_P003 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab197610 Zm00025ab197610_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab197620 Zm00025ab197620_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab197630 Zm00025ab197630_P001 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab197670 Zm00025ab197670_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab197770 Zm00025ab197770_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab197930 Zm00025ab197930_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab197940 Zm00025ab197940_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab197940 Zm00025ab197940_P002 expected PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00025ab198040 Zm00025ab198040_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P006 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P007 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P007 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P008 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P008 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P009 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00025ab198050 Zm00025ab198050_P009 expected PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00025ab198090 Zm00025ab198090_P001 ubiquitous PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab198520 Zm00025ab198520_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab198550 Zm00025ab198550_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P003 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P005 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P007 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab198680 Zm00025ab198680_P007 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab198790 Zm00025ab198790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab198790 Zm00025ab198790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab198790 Zm00025ab198790_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00025ab198890 Zm00025ab198890_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00025ab198890 Zm00025ab198890_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00025ab198890 Zm00025ab198890_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00025ab198890 Zm00025ab198890_P001 excluded PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab198960 Zm00025ab198960_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab198980 Zm00025ab198980_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab199160 Zm00025ab199160_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab199270 Zm00025ab199270_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab199270 Zm00025ab199270_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab199270 Zm00025ab199270_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab199520 Zm00025ab199520_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab199520 Zm00025ab199520_P001 expected PWY-5307 gentiodelphin biosynthesis RXN-8233 EC-2.3.1.153 Zm00025ab199770 Zm00025ab199770_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab199840 Zm00025ab199840_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab199870 Zm00025ab199870_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab199870 Zm00025ab199870_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab199870 Zm00025ab199870_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab199870 Zm00025ab199870_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab199870 Zm00025ab199870_P001 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab199890 Zm00025ab199890_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab199890 Zm00025ab199890_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab199890 Zm00025ab199890_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab199990 Zm00025ab199990_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab199990 Zm00025ab199990_P002 expected LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab200260 Zm00025ab200260_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab200260 Zm00025ab200260_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab200260 Zm00025ab200260_P002 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab200260 Zm00025ab200260_P002 NA PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab200360 Zm00025ab200360_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab200360 Zm00025ab200360_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab200360 Zm00025ab200360_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab200360 Zm00025ab200360_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P003 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P004 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P004 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab200480 Zm00025ab200480_P004 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab200500 Zm00025ab200500_P004 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200740 Zm00025ab200740_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab200750 Zm00025ab200750_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab200820 Zm00025ab200820_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab200830 Zm00025ab200830_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab200840 Zm00025ab200840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab200960 Zm00025ab200960_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab201030 Zm00025ab201030_P001 conditional PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00025ab201090 Zm00025ab201090_P002 viridiplantae PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab201240 Zm00025ab201240_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab201480 Zm00025ab201480_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab201480 Zm00025ab201480_P002 ubiquitous PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab201580 Zm00025ab201580_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab201790 Zm00025ab201790_P001 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P002 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00025ab201840 Zm00025ab201840_P002 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab201910 Zm00025ab201910_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab201910 Zm00025ab201910_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab201910 Zm00025ab201910_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab201910 Zm00025ab201910_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab201950 Zm00025ab201950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab201950 Zm00025ab201950_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00025ab201980 Zm00025ab201980_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab202090 Zm00025ab202090_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab202090 Zm00025ab202090_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab202090 Zm00025ab202090_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab202120 Zm00025ab202120_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab202140 Zm00025ab202140_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab202140 Zm00025ab202140_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab202140 Zm00025ab202140_P003 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab202170 Zm00025ab202170_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab202290 Zm00025ab202290_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202330 Zm00025ab202330_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab202360 Zm00025ab202360_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab202360 Zm00025ab202360_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab202360 Zm00025ab202360_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab202380 Zm00025ab202380_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab202470 Zm00025ab202470_P001 expected PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab202480 Zm00025ab202480_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab202480 Zm00025ab202480_P001 NA PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P001 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P002 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P003 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P004 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P005 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P006 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P007 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab202530 Zm00025ab202530_P008 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab202660 Zm00025ab202660_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab202660 Zm00025ab202660_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab202710 Zm00025ab202710_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab202760 Zm00025ab202760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202760 Zm00025ab202760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202760 Zm00025ab202760_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab202770 Zm00025ab202770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202770 Zm00025ab202770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab202770 Zm00025ab202770_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab203000 Zm00025ab203000_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab203000 Zm00025ab203000_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab203000 Zm00025ab203000_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab203010 Zm00025ab203010_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab203010 Zm00025ab203010_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab203010 Zm00025ab203010_P001 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00025ab203030 Zm00025ab203030_P001 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00025ab203030 Zm00025ab203030_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab203150 Zm00025ab203150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab203150 Zm00025ab203150_P002 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00025ab203160 Zm00025ab203160_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00025ab203160 Zm00025ab203160_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab203230 Zm00025ab203230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab203230 Zm00025ab203230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab203230 Zm00025ab203230_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab203250 Zm00025ab203250_P002 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab203310 Zm00025ab203310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab203400 Zm00025ab203400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab203400 Zm00025ab203400_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab203400 Zm00025ab203400_P003 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab203420 Zm00025ab203420_P006 NA PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab203670 Zm00025ab203670_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab203670 Zm00025ab203670_P002 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab203800 Zm00025ab203800_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab203800 Zm00025ab203800_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P006 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab203840 Zm00025ab203840_P007 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab203870 Zm00025ab203870_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab203880 Zm00025ab203880_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab204090 Zm00025ab204090_P001 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00025ab204140 Zm00025ab204140_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00025ab204140 Zm00025ab204140_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00025ab204140 Zm00025ab204140_P001 conditional PWY-5139 pelargonidin conjugates biosynthesis RXN-7832 EC-2.4.1.116 Zm00025ab204150 Zm00025ab204150_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab204160 Zm00025ab204160_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab204160 Zm00025ab204160_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab204190 Zm00025ab204190_P003 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab204220 Zm00025ab204220_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab204220 Zm00025ab204220_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab204220 Zm00025ab204220_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab204220 Zm00025ab204220_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab204240 Zm00025ab204240_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab204240 Zm00025ab204240_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab204240 Zm00025ab204240_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab204240 Zm00025ab204240_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab204280 Zm00025ab204280_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab204280 Zm00025ab204280_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab204280 Zm00025ab204280_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab204280 Zm00025ab204280_P001 NA PWY-6887 kauralexin biosynthesis RXN-12593 EC-4.2.3.103 Zm00025ab204310 Zm00025ab204310_P001 conditional PWY-7481 oryzalide A biosynthesis RXN-12593 EC-4.2.3.103 Zm00025ab204310 Zm00025ab204310_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab204330 Zm00025ab204330_P001 conditional PWYQT-4433 CA1P biosynthesis 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN EC-3.1.3.63 Zm00025ab204430 Zm00025ab204430_P001 NA PWYQT-4433 CA1P biosynthesis 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN EC-3.1.3.63 Zm00025ab204430 Zm00025ab204430_P002 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab204640 Zm00025ab204640_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab204960 Zm00025ab204960_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab204960 Zm00025ab204960_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab205100 Zm00025ab205100_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab205100 Zm00025ab205100_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab205100 Zm00025ab205100_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab205100 Zm00025ab205100_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab205190 Zm00025ab205190_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab205210 Zm00025ab205210_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab205220 Zm00025ab205220_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab205510 Zm00025ab205510_P002 NA PWY-84 resveratrol biosynthesis RXN-87 EC-2.3.1.95 Zm00025ab205540 Zm00025ab205540_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab205740 Zm00025ab205740_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab205740 Zm00025ab205740_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab205740 Zm00025ab205740_P003 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab205970 Zm00025ab205970_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab205970 Zm00025ab205970_P002 excluded PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00025ab206470 Zm00025ab206470_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab206520 Zm00025ab206520_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab206520 Zm00025ab206520_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab206530 Zm00025ab206530_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab206530 Zm00025ab206530_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab206540 Zm00025ab206540_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab206540 Zm00025ab206540_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab206590 Zm00025ab206590_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab206590 Zm00025ab206590_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab206590 Zm00025ab206590_P003 viridiplantae PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab206690 Zm00025ab206690_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab206690 Zm00025ab206690_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab206730 Zm00025ab206730_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206950 Zm00025ab206950_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206950 Zm00025ab206950_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206950 Zm00025ab206950_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206950 Zm00025ab206950_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206950 Zm00025ab206950_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00025ab206950 Zm00025ab206950_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00025ab206960 Zm00025ab206960_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab206960 Zm00025ab206960_P002 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00025ab206960 Zm00025ab206960_P002 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab207080 Zm00025ab207080_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab207130 Zm00025ab207130_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab207160 Zm00025ab207160_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab207280 Zm00025ab207280_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab207280 Zm00025ab207280_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab207280 Zm00025ab207280_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab207280 Zm00025ab207280_P004 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab207490 Zm00025ab207490_P001 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab207690 Zm00025ab207690_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab207690 Zm00025ab207690_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab207690 Zm00025ab207690_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab207690 Zm00025ab207690_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab207760 Zm00025ab207760_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab207760 Zm00025ab207760_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab207760 Zm00025ab207760_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab207760 Zm00025ab207760_P001 NA PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab207770 Zm00025ab207770_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab207770 Zm00025ab207770_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab207770 Zm00025ab207770_P003 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab208480 Zm00025ab208480_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab208480 Zm00025ab208480_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab208480 Zm00025ab208480_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab208480 Zm00025ab208480_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab208600 Zm00025ab208600_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P003 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P004 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P005 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab208690 Zm00025ab208690_P006 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab208720 Zm00025ab208720_P001 viridiplantae PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab208950 Zm00025ab208950_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab208950 Zm00025ab208950_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab209090 Zm00025ab209090_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab209120 Zm00025ab209120_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab209120 Zm00025ab209120_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab209270 Zm00025ab209270_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab209280 Zm00025ab209280_P001 ubiquitous PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab209300 Zm00025ab209300_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab209460 Zm00025ab209460_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab209490 Zm00025ab209490_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab209490 Zm00025ab209490_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab209510 Zm00025ab209510_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab209510 Zm00025ab209510_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab209510 Zm00025ab209510_P003 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab209520 Zm00025ab209520_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab209520 Zm00025ab209520_P001 excluded PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P003 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P004 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P005 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P005 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab209560 Zm00025ab209560_P005 NA PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab209600 Zm00025ab209600_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab209630 Zm00025ab209630_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab209640 Zm00025ab209640_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab209720 Zm00025ab209720_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab209780 Zm00025ab209780_P003 NA PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab209980 Zm00025ab209980_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab210050 Zm00025ab210050_P004 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab210100 Zm00025ab210100_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab210100 Zm00025ab210100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab210110 Zm00025ab210110_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab210120 Zm00025ab210120_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab210120 Zm00025ab210120_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab210120 Zm00025ab210120_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab210120 Zm00025ab210120_P004 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00025ab210190 Zm00025ab210190_P002 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab210340 Zm00025ab210340_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab210510 Zm00025ab210510_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab210600 Zm00025ab210600_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab210730 Zm00025ab210730_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab210730 Zm00025ab210730_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab210730 Zm00025ab210730_P003 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab210750 Zm00025ab210750_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab210830 Zm00025ab210830_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab211180 Zm00025ab211180_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab211180 Zm00025ab211180_P002 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab211340 Zm00025ab211340_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab211340 Zm00025ab211340_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab211340 Zm00025ab211340_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab211350 Zm00025ab211350_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab211350 Zm00025ab211350_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab211400 Zm00025ab211400_P003 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab211670 Zm00025ab211670_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00025ab211930 Zm00025ab211930_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00025ab211930 Zm00025ab211930_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00025ab211930 Zm00025ab211930_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab212030 Zm00025ab212030_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P004 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P005 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P005 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P006 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P006 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P007 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P007 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab212170 Zm00025ab212170_P008 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P008 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab212170 Zm00025ab212170_P008 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab212260 Zm00025ab212260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab212260 Zm00025ab212260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab212260 Zm00025ab212260_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab212310 Zm00025ab212310_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab212310 Zm00025ab212310_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab212310 Zm00025ab212310_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab212380 Zm00025ab212380_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab212470 Zm00025ab212470_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab212820 Zm00025ab212820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab212820 Zm00025ab212820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab212820 Zm00025ab212820_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab213090 Zm00025ab213090_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab213120 Zm00025ab213120_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab213160 Zm00025ab213160_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab213160 Zm00025ab213160_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab213670 Zm00025ab213670_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab213670 Zm00025ab213670_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab213670 Zm00025ab213670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab213670 Zm00025ab213670_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab213670 Zm00025ab213670_P001 NA PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab213680 Zm00025ab213680_P001 expected TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab213950 Zm00025ab213950_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab213950 Zm00025ab213950_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab213950 Zm00025ab213950_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P004 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P004 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P005 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P005 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab214070 Zm00025ab214070_P005 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214110 Zm00025ab214110_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214110 Zm00025ab214110_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214110 Zm00025ab214110_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214110 Zm00025ab214110_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab214130 Zm00025ab214130_P005 NA PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab214480 Zm00025ab214480_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab214500 Zm00025ab214500_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab214500 Zm00025ab214500_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab214500 Zm00025ab214500_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab214500 Zm00025ab214500_P004 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab214520 Zm00025ab214520_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab214520 Zm00025ab214520_P002 expected PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab214530 Zm00025ab214530_P001 NA PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab214660 Zm00025ab214660_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab214740 Zm00025ab214740_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab214930 Zm00025ab214930_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab214930 Zm00025ab214930_P002 NA PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab215110 Zm00025ab215110_P002 expected LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab215220 Zm00025ab215220_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab215380 Zm00025ab215380_P002 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab215420 Zm00025ab215420_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab215420 Zm00025ab215420_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab215420 Zm00025ab215420_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab215430 Zm00025ab215430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab215430 Zm00025ab215430_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab215430 Zm00025ab215430_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab215430 Zm00025ab215430_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab215430 Zm00025ab215430_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00025ab215470 Zm00025ab215470_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00025ab215470 Zm00025ab215470_P002 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P004 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P005 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P006 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P007 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab215530 Zm00025ab215530_P008 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab215800 Zm00025ab215800_P002 conditional PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00025ab215940 Zm00025ab215940_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab216010 Zm00025ab216010_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab216240 Zm00025ab216240_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab216240 Zm00025ab216240_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab216240 Zm00025ab216240_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab216320 Zm00025ab216320_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab216320 Zm00025ab216320_P002 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8342 EC-2.8.1.12 Zm00025ab216330 Zm00025ab216330_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8342 EC-2.8.1.12 Zm00025ab216330 Zm00025ab216330_P002 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P002 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P003 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P003 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P003 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P004 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P004 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab216360 Zm00025ab216360_P004 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab216410 Zm00025ab216410_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab216440 Zm00025ab216440_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab216440 Zm00025ab216440_P002 excluded PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab216450 Zm00025ab216450_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab216450 Zm00025ab216450_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab216450 Zm00025ab216450_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab216450 Zm00025ab216450_P004 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab216550 Zm00025ab216550_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab216550 Zm00025ab216550_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab216580 Zm00025ab216580_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab216580 Zm00025ab216580_P001 conditional PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00025ab216700 Zm00025ab216700_P001 expected PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00025ab216700 Zm00025ab216700_P002 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab216900 Zm00025ab216900_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab216960 Zm00025ab216960_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab216960 Zm00025ab216960_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab216960 Zm00025ab216960_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P005 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P006 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P006 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P007 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab217120 Zm00025ab217120_P007 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab217190 Zm00025ab217190_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab217190 Zm00025ab217190_P002 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab217190 Zm00025ab217190_P003 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab217190 Zm00025ab217190_P004 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab217190 Zm00025ab217190_P005 conditional TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00025ab217220 Zm00025ab217220_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00025ab217220 Zm00025ab217220_P003 viridiplantae PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab217490 Zm00025ab217490_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab217490 Zm00025ab217490_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab217720 Zm00025ab217720_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab217720 Zm00025ab217720_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab217720 Zm00025ab217720_P003 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab218010 Zm00025ab218010_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P002 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P003 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P004 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P005 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab218040 Zm00025ab218040_P006 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab218130 Zm00025ab218130_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab218140 Zm00025ab218140_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab218140 Zm00025ab218140_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab218180 Zm00025ab218180_P001 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab218250 Zm00025ab218250_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab218250 Zm00025ab218250_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab218250 Zm00025ab218250_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab218250 Zm00025ab218250_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab218430 Zm00025ab218430_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab218710 Zm00025ab218710_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab218740 Zm00025ab218740_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab218740 Zm00025ab218740_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation D-XYLULOSE-REDUCTASE-RXN EC-1.1.1.9 Zm00025ab218760 Zm00025ab218760_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab219010 Zm00025ab219010_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab219010 Zm00025ab219010_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab219010 Zm00025ab219010_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab219010 Zm00025ab219010_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab219280 Zm00025ab219280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab219280 Zm00025ab219280_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab219280 Zm00025ab219280_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab219280 Zm00025ab219280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab219280 Zm00025ab219280_P001 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab219340 Zm00025ab219340_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab219340 Zm00025ab219340_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab219360 Zm00025ab219360_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab219360 Zm00025ab219360_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab219520 Zm00025ab219520_P001 ubiquitous TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab219540 Zm00025ab219540_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab219540 Zm00025ab219540_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab219640 Zm00025ab219640_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab219640 Zm00025ab219640_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab219640 Zm00025ab219640_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab219640 Zm00025ab219640_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab219740 Zm00025ab219740_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab219800 Zm00025ab219800_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab219810 Zm00025ab219810_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab219930 Zm00025ab219930_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab220000 Zm00025ab220000_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab220000 Zm00025ab220000_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab220010 Zm00025ab220010_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab220040 Zm00025ab220040_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00025ab220150 Zm00025ab220150_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab220290 Zm00025ab220290_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab220330 Zm00025ab220330_P001 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab220330 Zm00025ab220330_P002 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab220330 Zm00025ab220330_P003 ubiquitous PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab220410 Zm00025ab220410_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab220430 Zm00025ab220430_P001 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab220550 Zm00025ab220550_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab220560 Zm00025ab220560_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab220690 Zm00025ab220690_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00025ab220720 Zm00025ab220720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab221130 Zm00025ab221130_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab221130 Zm00025ab221130_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab221190 Zm00025ab221190_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab221300 Zm00025ab221300_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab221310 Zm00025ab221310_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab221310 Zm00025ab221310_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab221310 Zm00025ab221310_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab221500 Zm00025ab221500_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P002 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P003 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P004 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab221670 Zm00025ab221670_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab221690 Zm00025ab221690_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab221720 Zm00025ab221720_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00025ab221720 Zm00025ab221720_P001 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab221780 Zm00025ab221780_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab221780 Zm00025ab221780_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab222040 Zm00025ab222040_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab222040 Zm00025ab222040_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P004 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P005 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab222100 Zm00025ab222100_P006 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab222210 Zm00025ab222210_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab222210 Zm00025ab222210_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab222420 Zm00025ab222420_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab222470 Zm00025ab222470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab222470 Zm00025ab222470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab222470 Zm00025ab222470_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00025ab222550 Zm00025ab222550_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00025ab222550 Zm00025ab222550_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab222580 Zm00025ab222580_P001 viridiplantae PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00025ab222730 Zm00025ab222730_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab222740 Zm00025ab222740_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab222740 Zm00025ab222740_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab222740 Zm00025ab222740_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00025ab222740 Zm00025ab222740_P004 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P002 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P003 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P003 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P003 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P004 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P004 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab223230 Zm00025ab223230_P004 expected PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab223510 Zm00025ab223510_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab223830 Zm00025ab223830_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab223870 Zm00025ab223870_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab223870 Zm00025ab223870_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab223870 Zm00025ab223870_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab223870 Zm00025ab223870_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab223870 Zm00025ab223870_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab223870 Zm00025ab223870_P002 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab223890 Zm00025ab223890_P001 viridiplantae PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00025ab224060 Zm00025ab224060_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab224110 Zm00025ab224110_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab224410 Zm00025ab224410_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab224540 Zm00025ab224540_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab224540 Zm00025ab224540_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab224540 Zm00025ab224540_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab224540 Zm00025ab224540_P002 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab224700 Zm00025ab224700_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00025ab224700 Zm00025ab224700_P004 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab224730 Zm00025ab224730_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab224740 Zm00025ab224740_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab224740 Zm00025ab224740_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab224820 Zm00025ab224820_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab224860 Zm00025ab224860_P001 NA CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab224900 Zm00025ab224900_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab224930 Zm00025ab224930_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab225020 Zm00025ab225020_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00025ab225070 Zm00025ab225070_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab225100 Zm00025ab225100_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab225100 Zm00025ab225100_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab225100 Zm00025ab225100_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab225360 Zm00025ab225360_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab225360 Zm00025ab225360_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab225360 Zm00025ab225360_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab225360 Zm00025ab225360_P002 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab225380 Zm00025ab225380_P001 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00025ab225460 Zm00025ab225460_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab225780 Zm00025ab225780_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab225900 Zm00025ab225900_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab226210 Zm00025ab226210_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab226210 Zm00025ab226210_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab226280 Zm00025ab226280_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00025ab226610 Zm00025ab226610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab226630 Zm00025ab226630_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab226660 Zm00025ab226660_P001 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab226660 Zm00025ab226660_P002 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab226660 Zm00025ab226660_P003 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab226660 Zm00025ab226660_P004 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab226660 Zm00025ab226660_P005 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab226720 Zm00025ab226720_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab226720 Zm00025ab226720_P001 ubiquitous PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab226810 Zm00025ab226810_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14026 EC-3.1.3.91 Zm00025ab226810 Zm00025ab226810_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab226970 Zm00025ab226970_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab227010 Zm00025ab227010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab227010 Zm00025ab227010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab227010 Zm00025ab227010_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab227050 Zm00025ab227050_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab227090 Zm00025ab227090_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab227090 Zm00025ab227090_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab227090 Zm00025ab227090_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab227090 Zm00025ab227090_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab227370 Zm00025ab227370_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab227370 Zm00025ab227370_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab227410 Zm00025ab227410_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab227410 Zm00025ab227410_P003 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P004 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P004 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab227410 Zm00025ab227410_P004 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab227550 Zm00025ab227550_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab227550 Zm00025ab227550_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab227550 Zm00025ab227550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab227550 Zm00025ab227550_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab227550 Zm00025ab227550_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab227880 Zm00025ab227880_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab228030 Zm00025ab228030_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab228030 Zm00025ab228030_P002 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab228330 Zm00025ab228330_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab228550 Zm00025ab228550_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab228550 Zm00025ab228550_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab228550 Zm00025ab228550_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00025ab228550 Zm00025ab228550_P004 expected GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab229120 Zm00025ab229120_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab229120 Zm00025ab229120_P005 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab229150 Zm00025ab229150_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab229200 Zm00025ab229200_P004 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab229320 Zm00025ab229320_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab229330 Zm00025ab229330_P003 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab229360 Zm00025ab229360_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab229360 Zm00025ab229360_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00025ab229360 Zm00025ab229360_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab229380 Zm00025ab229380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab229380 Zm00025ab229380_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab229380 Zm00025ab229380_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab229610 Zm00025ab229610_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab229840 Zm00025ab229840_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab229840 Zm00025ab229840_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00025ab229840 Zm00025ab229840_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00025ab229840 Zm00025ab229840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab230120 Zm00025ab230120_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab230120 Zm00025ab230120_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab230120 Zm00025ab230120_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab230250 Zm00025ab230250_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab230300 Zm00025ab230300_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab230300 Zm00025ab230300_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab230310 Zm00025ab230310_P004 ubiquitous SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab230650 Zm00025ab230650_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab230650 Zm00025ab230650_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab230750 Zm00025ab230750_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab230750 Zm00025ab230750_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab230820 Zm00025ab230820_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab231020 Zm00025ab231020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab231020 Zm00025ab231020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab231020 Zm00025ab231020_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab231290 Zm00025ab231290_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab231290 Zm00025ab231290_P002 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab231390 Zm00025ab231390_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab231390 Zm00025ab231390_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab231460 Zm00025ab231460_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab231460 Zm00025ab231460_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab231460 Zm00025ab231460_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00025ab231510 Zm00025ab231510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab232030 Zm00025ab232030_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab232130 Zm00025ab232130_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab232200 Zm00025ab232200_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab232200 Zm00025ab232200_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab232200 Zm00025ab232200_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab232200 Zm00025ab232200_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab232200 Zm00025ab232200_P005 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab232230 Zm00025ab232230_P002 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P004 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P005 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P005 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P005 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P006 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P006 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P006 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P006 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P007 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P007 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P007 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P007 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P008 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P008 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P008 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P008 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P009 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P009 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P009 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P009 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P010 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P010 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P010 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232300 Zm00025ab232300_P010 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232310 Zm00025ab232310_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab232310 Zm00025ab232310_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232310 Zm00025ab232310_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab232310 Zm00025ab232310_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab232320 Zm00025ab232320_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00025ab232320 Zm00025ab232320_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00025ab232320 Zm00025ab232320_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab232550 Zm00025ab232550_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab232550 Zm00025ab232550_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab232550 Zm00025ab232550_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab232550 Zm00025ab232550_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab232570 Zm00025ab232570_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab232570 Zm00025ab232570_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab232990 Zm00025ab232990_P002 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab233110 Zm00025ab233110_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab233110 Zm00025ab233110_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab233110 Zm00025ab233110_P001 ubiquitous PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab233200 Zm00025ab233200_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab233200 Zm00025ab233200_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab233200 Zm00025ab233200_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab233230 Zm00025ab233230_P001 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab233290 Zm00025ab233290_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab233290 Zm00025ab233290_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab233290 Zm00025ab233290_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab233290 Zm00025ab233290_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab233290 Zm00025ab233290_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab233320 Zm00025ab233320_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P004 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P005 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P005 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P005 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab233590 Zm00025ab233590_P005 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab233910 Zm00025ab233910_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab233930 Zm00025ab233930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab233930 Zm00025ab233930_P002 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab233990 Zm00025ab233990_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab233990 Zm00025ab233990_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab234030 Zm00025ab234030_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab234060 Zm00025ab234060_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab234060 Zm00025ab234060_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab234060 Zm00025ab234060_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab234060 Zm00025ab234060_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab234160 Zm00025ab234160_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab234160 Zm00025ab234160_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab234380 Zm00025ab234380_P001 expected PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab234420 Zm00025ab234420_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab234420 Zm00025ab234420_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab234460 Zm00025ab234460_P001 conditional PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00025ab234560 Zm00025ab234560_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab234700 Zm00025ab234700_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab234790 Zm00025ab234790_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab234800 Zm00025ab234800_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab234800 Zm00025ab234800_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab234800 Zm00025ab234800_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab234800 Zm00025ab234800_P004 ubiquitous PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00025ab234940 Zm00025ab234940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab234950 Zm00025ab234950_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab234990 Zm00025ab234990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab234990 Zm00025ab234990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab234990 Zm00025ab234990_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab235030 Zm00025ab235030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235030 Zm00025ab235030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235030 Zm00025ab235030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab235040 Zm00025ab235040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235040 Zm00025ab235040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235040 Zm00025ab235040_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab235060 Zm00025ab235060_P002 conditional PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00025ab235480 Zm00025ab235480_P001 conditional PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00025ab235480 Zm00025ab235480_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab235550 Zm00025ab235550_P001 viridiplantae PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab235580 Zm00025ab235580_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab235580 Zm00025ab235580_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab235580 Zm00025ab235580_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab235580 Zm00025ab235580_P004 NA PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P001 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00025ab235620 Zm00025ab235620_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P002 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00025ab235620 Zm00025ab235620_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab235620 Zm00025ab235620_P003 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab235750 Zm00025ab235750_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab235750 Zm00025ab235750_P002 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab235750 Zm00025ab235750_P003 conditional PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00025ab235800 Zm00025ab235800_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00025ab235800 Zm00025ab235800_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00025ab235800 Zm00025ab235800_P002 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00025ab235800 Zm00025ab235800_P002 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab235810 Zm00025ab235810_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) PORPHOBILSYNTH-RXN EC-4.2.1.24 Zm00025ab235970 Zm00025ab235970_P001 viridiplantae PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00025ab235990 Zm00025ab235990_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00025ab235990 Zm00025ab235990_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00025ab235990 Zm00025ab235990_P002 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00025ab235990 Zm00025ab235990_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab236040 Zm00025ab236040_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00025ab236180 Zm00025ab236180_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab236200 Zm00025ab236200_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00025ab236220 Zm00025ab236220_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab236290 Zm00025ab236290_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab236290 Zm00025ab236290_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab236290 Zm00025ab236290_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab236600 Zm00025ab236600_P001 NA PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab236970 Zm00025ab236970_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab236970 Zm00025ab236970_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab236970 Zm00025ab236970_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab236970 Zm00025ab236970_P004 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab236970 Zm00025ab236970_P005 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab237030 Zm00025ab237030_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab237030 Zm00025ab237030_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab237030 Zm00025ab237030_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab237030 Zm00025ab237030_P004 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab237200 Zm00025ab237200_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab237210 Zm00025ab237210_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab237230 Zm00025ab237230_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab237230 Zm00025ab237230_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab237290 Zm00025ab237290_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab237290 Zm00025ab237290_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab237450 Zm00025ab237450_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab237450 Zm00025ab237450_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab237450 Zm00025ab237450_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab237450 Zm00025ab237450_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab237550 Zm00025ab237550_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab237550 Zm00025ab237550_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab237710 Zm00025ab237710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab237710 Zm00025ab237710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab237710 Zm00025ab237710_P001 conditional PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00025ab237730 Zm00025ab237730_P001 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00025ab237730 Zm00025ab237730_P002 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00025ab237730 Zm00025ab237730_P003 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00025ab237730 Zm00025ab237730_P004 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237900 Zm00025ab237900_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237900 Zm00025ab237900_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237900 Zm00025ab237900_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237900 Zm00025ab237900_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab237950 Zm00025ab237950_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab237990 Zm00025ab237990_P005 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab238000 Zm00025ab238000_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab238000 Zm00025ab238000_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab238000 Zm00025ab238000_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab238000 Zm00025ab238000_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P003 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P004 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P004 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P005 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P005 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P005 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P005 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P006 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab238020 Zm00025ab238020_P006 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P006 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab238020 Zm00025ab238020_P006 expected PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab238100 Zm00025ab238100_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab238100 Zm00025ab238100_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab238100 Zm00025ab238100_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab238100 Zm00025ab238100_P004 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab238210 Zm00025ab238210_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab238210 Zm00025ab238210_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab238210 Zm00025ab238210_P001 viridiplantae PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00025ab238280 Zm00025ab238280_P001 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00025ab238280 Zm00025ab238280_P002 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00025ab238280 Zm00025ab238280_P003 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00025ab238290 Zm00025ab238290_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab238310 Zm00025ab238310_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab238310 Zm00025ab238310_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab238310 Zm00025ab238310_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab238310 Zm00025ab238310_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab238390 Zm00025ab238390_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00025ab238560 Zm00025ab238560_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00025ab238610 Zm00025ab238610_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00025ab238610 Zm00025ab238610_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00025ab238610 Zm00025ab238610_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00025ab238610 Zm00025ab238610_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab238990 Zm00025ab238990_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab238990 Zm00025ab238990_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab238990 Zm00025ab238990_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab238990 Zm00025ab238990_P001 expected BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P004 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P005 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P005 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab239090 Zm00025ab239090_P006 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab239090 Zm00025ab239090_P006 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00025ab239130 Zm00025ab239130_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab239130 Zm00025ab239130_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab239130 Zm00025ab239130_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab239130 Zm00025ab239130_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab239130 Zm00025ab239130_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab239130 Zm00025ab239130_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab239170 Zm00025ab239170_P002 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab239200 Zm00025ab239200_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab239200 Zm00025ab239200_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab239200 Zm00025ab239200_P003 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab239250 Zm00025ab239250_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab239250 Zm00025ab239250_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab239250 Zm00025ab239250_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab239250 Zm00025ab239250_P002 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab239250 Zm00025ab239250_P003 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab239250 Zm00025ab239250_P003 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab239250 Zm00025ab239250_P004 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab239250 Zm00025ab239250_P004 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab239260 Zm00025ab239260_P003 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00025ab239280 Zm00025ab239280_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00025ab239280 Zm00025ab239280_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab239290 Zm00025ab239290_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab239400 Zm00025ab239400_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab239400 Zm00025ab239400_P002 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab239640 Zm00025ab239640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab239700 Zm00025ab239700_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P003 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab239730 Zm00025ab239730_P004 NA PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab239810 Zm00025ab239810_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab239810 Zm00025ab239810_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab239810 Zm00025ab239810_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab239810 Zm00025ab239810_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab239910 Zm00025ab239910_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab240270 Zm00025ab240270_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab240270 Zm00025ab240270_P001 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00025ab240310 Zm00025ab240310_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00025ab240310 Zm00025ab240310_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00025ab240310 Zm00025ab240310_P003 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00025ab240310 Zm00025ab240310_P004 viridiplantae PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00025ab240570 Zm00025ab240570_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00025ab240600 Zm00025ab240600_P001 expected PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P002 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P003 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P003 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab240690 Zm00025ab240690_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab240860 Zm00025ab240860_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab240870 Zm00025ab240870_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab241280 Zm00025ab241280_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00025ab241310 Zm00025ab241310_P001 expected PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00025ab241310 Zm00025ab241310_P002 expected PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00025ab241310 Zm00025ab241310_P003 expected PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00025ab241430 Zm00025ab241430_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab241510 Zm00025ab241510_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTINLIG-RXN EC-6.3.4.15 Zm00025ab241700 Zm00025ab241700_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTINLIG-RXN EC-6.3.4.15 Zm00025ab241700 Zm00025ab241700_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab241710 Zm00025ab241710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab241710 Zm00025ab241710_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab241820 Zm00025ab241820_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab241820 Zm00025ab241820_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab241820 Zm00025ab241820_P001 conditional PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab241900 Zm00025ab241900_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab241900 Zm00025ab241900_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab241900 Zm00025ab241900_P003 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab241900 Zm00025ab241900_P004 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab241900 Zm00025ab241900_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00025ab241920 Zm00025ab241920_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00025ab241920 Zm00025ab241920_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00025ab241920 Zm00025ab241920_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab241970 Zm00025ab241970_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab242070 Zm00025ab242070_P003 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab242130 Zm00025ab242130_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P003 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab242200 Zm00025ab242200_P003 ubiquitous PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P002 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P003 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P003 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00025ab242230 Zm00025ab242230_P003 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab242300 Zm00025ab242300_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab242720 Zm00025ab242720_P001 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab242930 Zm00025ab242930_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab242930 Zm00025ab242930_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab242930 Zm00025ab242930_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab242930 Zm00025ab242930_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab242930 Zm00025ab242930_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab242930 Zm00025ab242930_P001 ubiquitous PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab243110 Zm00025ab243110_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab243110 Zm00025ab243110_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab243110 Zm00025ab243110_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab243120 Zm00025ab243120_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab243120 Zm00025ab243120_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab243120 Zm00025ab243120_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab243520 Zm00025ab243520_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab243520 Zm00025ab243520_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab243520 Zm00025ab243520_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab243520 Zm00025ab243520_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab243660 Zm00025ab243660_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab243660 Zm00025ab243660_P002 expected PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab243670 Zm00025ab243670_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab243670 Zm00025ab243670_P002 NA SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab243710 Zm00025ab243710_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab243800 Zm00025ab243800_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab243800 Zm00025ab243800_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab243800 Zm00025ab243800_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab243800 Zm00025ab243800_P004 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab243820 Zm00025ab243820_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab243820 Zm00025ab243820_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab243820 Zm00025ab243820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab243870 Zm00025ab243870_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab243870 Zm00025ab243870_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab243870 Zm00025ab243870_P003 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00025ab244100 Zm00025ab244100_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00025ab244100 Zm00025ab244100_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab244310 Zm00025ab244310_P001 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab244660 Zm00025ab244660_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab244820 Zm00025ab244820_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab244830 Zm00025ab244830_P001 expected GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab244900 Zm00025ab244900_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab244900 Zm00025ab244900_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab244900 Zm00025ab244900_P001 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab245300 Zm00025ab245300_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab245300 Zm00025ab245300_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab245300 Zm00025ab245300_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab245300 Zm00025ab245300_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab245300 Zm00025ab245300_P005 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab245310 Zm00025ab245310_P005 ubiquitous TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab245320 Zm00025ab245320_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab245320 Zm00025ab245320_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00025ab245320 Zm00025ab245320_P003 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab245490 Zm00025ab245490_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab245490 Zm00025ab245490_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab245590 Zm00025ab245590_P002 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab245610 Zm00025ab245610_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab245660 Zm00025ab245660_P001 ubiquitous PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab245980 Zm00025ab245980_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab245980 Zm00025ab245980_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab245980 Zm00025ab245980_P001 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab246260 Zm00025ab246260_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab246450 Zm00025ab246450_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab246450 Zm00025ab246450_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P005 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P006 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P006 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P007 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00025ab246580 Zm00025ab246580_P007 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab246600 Zm00025ab246600_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab246610 Zm00025ab246610_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab246640 Zm00025ab246640_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab246640 Zm00025ab246640_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab246650 Zm00025ab246650_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab246650 Zm00025ab246650_P001 conditional PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P001 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P002 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P003 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P004 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00025ab246750 Zm00025ab246750_P005 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab246930 Zm00025ab246930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab246930 Zm00025ab246930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab246930 Zm00025ab246930_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab247500 Zm00025ab247500_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab247500 Zm00025ab247500_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab247720 Zm00025ab247720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab247720 Zm00025ab247720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab247720 Zm00025ab247720_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab247850 Zm00025ab247850_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab247850 Zm00025ab247850_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab247850 Zm00025ab247850_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab247990 Zm00025ab247990_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab248070 Zm00025ab248070_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248160 Zm00025ab248160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248160 Zm00025ab248160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248160 Zm00025ab248160_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248170 Zm00025ab248170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248170 Zm00025ab248170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248170 Zm00025ab248170_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248190 Zm00025ab248190_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P005 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P005 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab248210 Zm00025ab248210_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab248350 Zm00025ab248350_P003 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab248620 Zm00025ab248620_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab248620 Zm00025ab248620_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab248660 Zm00025ab248660_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab248660 Zm00025ab248660_P001 expected PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00025ab248800 Zm00025ab248800_P005 NA PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab248860 Zm00025ab248860_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab248860 Zm00025ab248860_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab249210 Zm00025ab249210_P004 expected PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00025ab249310 Zm00025ab249310_P001 conditional PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00025ab249310 Zm00025ab249310_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab249650 Zm00025ab249650_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab249650 Zm00025ab249650_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab249650 Zm00025ab249650_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab249700 Zm00025ab249700_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab249700 Zm00025ab249700_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab249700 Zm00025ab249700_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab249700 Zm00025ab249700_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab249800 Zm00025ab249800_P001 expected HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab249810 Zm00025ab249810_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250150 Zm00025ab250150_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250150 Zm00025ab250150_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250160 Zm00025ab250160_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250160 Zm00025ab250160_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250180 Zm00025ab250180_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250180 Zm00025ab250180_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250190 Zm00025ab250190_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250190 Zm00025ab250190_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab250210 Zm00025ab250210_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250220 Zm00025ab250220_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250220 Zm00025ab250220_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250250 Zm00025ab250250_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250250 Zm00025ab250250_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250260 Zm00025ab250260_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250260 Zm00025ab250260_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250270 Zm00025ab250270_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250270 Zm00025ab250270_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250300 Zm00025ab250300_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250300 Zm00025ab250300_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250350 Zm00025ab250350_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250350 Zm00025ab250350_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab250360 Zm00025ab250360_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab250360 Zm00025ab250360_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P005 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P005 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab250400 Zm00025ab250400_P005 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00025ab250430 Zm00025ab250430_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab250450 Zm00025ab250450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab250450 Zm00025ab250450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab250450 Zm00025ab250450_P001 conditional PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab250470 Zm00025ab250470_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00025ab250470 Zm00025ab250470_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00025ab250470 Zm00025ab250470_P001 expected PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00025ab250640 Zm00025ab250640_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00025ab250640 Zm00025ab250640_P001 ubiquitous PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00025ab250640 Zm00025ab250640_P002 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00025ab250640 Zm00025ab250640_P002 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab250680 Zm00025ab250680_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab250690 Zm00025ab250690_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab250690 Zm00025ab250690_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab250690 Zm00025ab250690_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab250720 Zm00025ab250720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab250720 Zm00025ab250720_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00025ab250750 Zm00025ab250750_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00025ab250750 Zm00025ab250750_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00025ab250750 Zm00025ab250750_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab250850 Zm00025ab250850_P002 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab250910 Zm00025ab250910_P003 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab250910 Zm00025ab250910_P003 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab250910 Zm00025ab250910_P004 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab250910 Zm00025ab250910_P004 excluded PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab251240 Zm00025ab251240_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P004 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P005 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P006 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab251320 Zm00025ab251320_P007 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab251400 Zm00025ab251400_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab251400 Zm00025ab251400_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab251400 Zm00025ab251400_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab251400 Zm00025ab251400_P004 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab251520 Zm00025ab251520_P003 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab251710 Zm00025ab251710_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab251710 Zm00025ab251710_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab251780 Zm00025ab251780_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab251790 Zm00025ab251790_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab251790 Zm00025ab251790_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab251790 Zm00025ab251790_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab251790 Zm00025ab251790_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00025ab251790 Zm00025ab251790_P005 viridiplantae PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab252230 Zm00025ab252230_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab252230 Zm00025ab252230_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab252230 Zm00025ab252230_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab252230 Zm00025ab252230_P002 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00025ab252230 Zm00025ab252230_P002 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab252310 Zm00025ab252310_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab252320 Zm00025ab252320_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab252320 Zm00025ab252320_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab252500 Zm00025ab252500_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab252530 Zm00025ab252530_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab252550 Zm00025ab252550_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00025ab252700 Zm00025ab252700_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00025ab252700 Zm00025ab252700_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab252750 Zm00025ab252750_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab253060 Zm00025ab253060_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab253060 Zm00025ab253060_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab253310 Zm00025ab253310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253500 Zm00025ab253500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253500 Zm00025ab253500_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253500 Zm00025ab253500_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab253550 Zm00025ab253550_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab253550 Zm00025ab253550_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab253550 Zm00025ab253550_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab253550 Zm00025ab253550_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab253550 Zm00025ab253550_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab253570 Zm00025ab253570_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253700 Zm00025ab253700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253830 Zm00025ab253830_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253830 Zm00025ab253830_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253830 Zm00025ab253830_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab253830 Zm00025ab253830_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab253870 Zm00025ab253870_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab253980 Zm00025ab253980_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab253980 Zm00025ab253980_P002 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab253980 Zm00025ab253980_P003 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab254000 Zm00025ab254000_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab254010 Zm00025ab254010_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab254010 Zm00025ab254010_P003 conditional HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00025ab254140 Zm00025ab254140_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00025ab254200 Zm00025ab254200_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00025ab254200 Zm00025ab254200_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P005 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00025ab254200 Zm00025ab254200_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab254200 Zm00025ab254200_P006 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00025ab254260 Zm00025ab254260_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00025ab254260 Zm00025ab254260_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00025ab254260 Zm00025ab254260_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab254510 Zm00025ab254510_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab254510 Zm00025ab254510_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab254590 Zm00025ab254590_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab254590 Zm00025ab254590_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab254590 Zm00025ab254590_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab254700 Zm00025ab254700_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab254700 Zm00025ab254700_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab254700 Zm00025ab254700_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab254700 Zm00025ab254700_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab254700 Zm00025ab254700_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00025ab254700 Zm00025ab254700_P003 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab254750 Zm00025ab254750_P001 NA PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab254900 Zm00025ab254900_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab254970 Zm00025ab254970_P002 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab255300 Zm00025ab255300_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab255300 Zm00025ab255300_P001 NA LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255650 Zm00025ab255650_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255650 Zm00025ab255650_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255650 Zm00025ab255650_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255650 Zm00025ab255650_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255650 Zm00025ab255650_P005 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255660 Zm00025ab255660_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255660 Zm00025ab255660_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255660 Zm00025ab255660_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00025ab255660 Zm00025ab255660_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab255670 Zm00025ab255670_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab255670 Zm00025ab255670_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab255750 Zm00025ab255750_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab255750 Zm00025ab255750_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab255750 Zm00025ab255750_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab255750 Zm00025ab255750_P001 NA PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab255780 Zm00025ab255780_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab256380 Zm00025ab256380_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab256390 Zm00025ab256390_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00025ab256510 Zm00025ab256510_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00025ab256510 Zm00025ab256510_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00025ab256510 Zm00025ab256510_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab256690 Zm00025ab256690_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab256690 Zm00025ab256690_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab256690 Zm00025ab256690_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab256690 Zm00025ab256690_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00025ab256700 Zm00025ab256700_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab256770 Zm00025ab256770_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab257020 Zm00025ab257020_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab257190 Zm00025ab257190_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab257190 Zm00025ab257190_P002 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00025ab257310 Zm00025ab257310_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab257480 Zm00025ab257480_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab257480 Zm00025ab257480_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab257560 Zm00025ab257560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab257560 Zm00025ab257560_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab257670 Zm00025ab257670_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab257920 Zm00025ab257920_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab257920 Zm00025ab257920_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab257920 Zm00025ab257920_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab257940 Zm00025ab257940_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab258100 Zm00025ab258100_P005 NA VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00025ab258260 Zm00025ab258260_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00025ab258260 Zm00025ab258260_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P004 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P005 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab258340 Zm00025ab258340_P006 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab258360 Zm00025ab258360_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab258420 Zm00025ab258420_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab258420 Zm00025ab258420_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab258420 Zm00025ab258420_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab258420 Zm00025ab258420_P002 expected PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00025ab258450 Zm00025ab258450_P001 conditional PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00025ab258470 Zm00025ab258470_P001 expected PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00025ab258470 Zm00025ab258470_P002 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab258690 Zm00025ab258690_P003 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab258720 Zm00025ab258720_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab258720 Zm00025ab258720_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab258820 Zm00025ab258820_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab258820 Zm00025ab258820_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab258820 Zm00025ab258820_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P003 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P004 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P004 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P005 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P005 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab259020 Zm00025ab259020_P005 NA PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab259300 Zm00025ab259300_P002 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab259480 Zm00025ab259480_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab259500 Zm00025ab259500_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab259500 Zm00025ab259500_P002 conditional PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab259600 Zm00025ab259600_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab259850 Zm00025ab259850_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab259850 Zm00025ab259850_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab259850 Zm00025ab259850_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab259890 Zm00025ab259890_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab259890 Zm00025ab259890_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab259900 Zm00025ab259900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab259900 Zm00025ab259900_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab260050 Zm00025ab260050_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab260290 Zm00025ab260290_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab260680 Zm00025ab260680_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab260710 Zm00025ab260710_P002 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYRHAMREDUCT-RXN EC-1.1.1.133 Zm00025ab260840 Zm00025ab260840_P001 conditional DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYDRHAMEPIM-RXN EC-5.1.3.13 Zm00025ab260840 Zm00025ab260840_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab260900 Zm00025ab260900_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00025ab260910 Zm00025ab260910_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00025ab260910 Zm00025ab260910_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab261030 Zm00025ab261030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab261030 Zm00025ab261030_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab261220 Zm00025ab261220_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab261330 Zm00025ab261330_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00025ab261370 Zm00025ab261370_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00025ab261370 Zm00025ab261370_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00025ab261370 Zm00025ab261370_P003 viridiplantae PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P001 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P002 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P003 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P004 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P005 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00025ab261400 Zm00025ab261400_P006 expected GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00025ab261620 Zm00025ab261620_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00025ab261620 Zm00025ab261620_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00025ab261620 Zm00025ab261620_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab261750 Zm00025ab261750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab261750 Zm00025ab261750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab261750 Zm00025ab261750_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab261900 Zm00025ab261900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab261900 Zm00025ab261900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab261900 Zm00025ab261900_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab261940 Zm00025ab261940_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab261940 Zm00025ab261940_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab261940 Zm00025ab261940_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00025ab261940 Zm00025ab261940_P002 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab261980 Zm00025ab261980_P001 expected PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00025ab262110 Zm00025ab262110_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab262320 Zm00025ab262320_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab262320 Zm00025ab262320_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab262460 Zm00025ab262460_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab262460 Zm00025ab262460_P002 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab262470 Zm00025ab262470_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab262470 Zm00025ab262470_P002 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab262490 Zm00025ab262490_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P002 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P003 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab262720 Zm00025ab262720_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P003 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab262730 Zm00025ab262730_P004 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab262750 Zm00025ab262750_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab262770 Zm00025ab262770_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab262770 Zm00025ab262770_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab262770 Zm00025ab262770_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab262770 Zm00025ab262770_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab262770 Zm00025ab262770_P005 NA HISTSYN-PWY L-histidine biosynthesis HISTAMINOTRANS-RXN EC-2.6.1.9 Zm00025ab262800 Zm00025ab262800_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab263060 Zm00025ab263060_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab263060 Zm00025ab263060_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab263060 Zm00025ab263060_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab263060 Zm00025ab263060_P004 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab263060 Zm00025ab263060_P005 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab263090 Zm00025ab263090_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab263090 Zm00025ab263090_P002 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab263090 Zm00025ab263090_P003 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab263100 Zm00025ab263100_P001 ubiquitous PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab263130 Zm00025ab263130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab263130 Zm00025ab263130_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab263170 Zm00025ab263170_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab263700 Zm00025ab263700_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab263710 Zm00025ab263710_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab263840 Zm00025ab263840_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab263840 Zm00025ab263840_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab263850 Zm00025ab263850_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab263850 Zm00025ab263850_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264140 Zm00025ab264140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264140 Zm00025ab264140_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab264190 Zm00025ab264190_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab264190 Zm00025ab264190_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab264190 Zm00025ab264190_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab264320 Zm00025ab264320_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264330 Zm00025ab264330_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264330 Zm00025ab264330_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264330 Zm00025ab264330_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264340 Zm00025ab264340_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264340 Zm00025ab264340_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab264340 Zm00025ab264340_P003 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab264410 Zm00025ab264410_P004 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab264470 Zm00025ab264470_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab264470 Zm00025ab264470_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab264470 Zm00025ab264470_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab264470 Zm00025ab264470_P002 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab264480 Zm00025ab264480_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab264480 Zm00025ab264480_P001 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab264660 Zm00025ab264660_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab264670 Zm00025ab264670_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab264670 Zm00025ab264670_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab264670 Zm00025ab264670_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab264780 Zm00025ab264780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab264780 Zm00025ab264780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab264780 Zm00025ab264780_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264980 Zm00025ab264980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264980 Zm00025ab264980_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264980 Zm00025ab264980_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264980 Zm00025ab264980_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab264980 Zm00025ab264980_P005 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab265100 Zm00025ab265100_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab265100 Zm00025ab265100_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab265160 Zm00025ab265160_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab265160 Zm00025ab265160_P002 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab265170 Zm00025ab265170_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab265170 Zm00025ab265170_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab265170 Zm00025ab265170_P003 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00025ab265450 Zm00025ab265450_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00025ab265450 Zm00025ab265450_P002 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab265480 Zm00025ab265480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab265480 Zm00025ab265480_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab265630 Zm00025ab265630_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab265630 Zm00025ab265630_P002 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab265690 Zm00025ab265690_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00025ab265810 Zm00025ab265810_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00025ab265810 Zm00025ab265810_P003 conditional PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00025ab266400 Zm00025ab266400_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab266460 Zm00025ab266460_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab266460 Zm00025ab266460_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab266460 Zm00025ab266460_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab266460 Zm00025ab266460_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab266750 Zm00025ab266750_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab266800 Zm00025ab266800_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab266800 Zm00025ab266800_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab266800 Zm00025ab266800_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab267380 Zm00025ab267380_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab267380 Zm00025ab267380_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab267380 Zm00025ab267380_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab267390 Zm00025ab267390_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab267390 Zm00025ab267390_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab267390 Zm00025ab267390_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P002 expected PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab267420 Zm00025ab267420_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab267420 Zm00025ab267420_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation RXN-7913 EC-2.7.4.25 Zm00025ab267420 Zm00025ab267420_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab267420 Zm00025ab267420_P004 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab267430 Zm00025ab267430_P002 NA PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab267660 Zm00025ab267660_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab267660 Zm00025ab267660_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab267670 Zm00025ab267670_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab267670 Zm00025ab267670_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab267710 Zm00025ab267710_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab267710 Zm00025ab267710_P001 NA PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab267940 Zm00025ab267940_P001 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab267950 Zm00025ab267950_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab267980 Zm00025ab267980_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab267980 Zm00025ab267980_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab267980 Zm00025ab267980_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab267980 Zm00025ab267980_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab267980 Zm00025ab267980_P005 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab268070 Zm00025ab268070_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab268070 Zm00025ab268070_P001 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab268210 Zm00025ab268210_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab268370 Zm00025ab268370_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab268370 Zm00025ab268370_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab268370 Zm00025ab268370_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab268370 Zm00025ab268370_P001 NA PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab268500 Zm00025ab268500_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab268500 Zm00025ab268500_P002 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab268500 Zm00025ab268500_P003 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab268500 Zm00025ab268500_P004 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00025ab268500 Zm00025ab268500_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab268610 Zm00025ab268610_P002 NA PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab268810 Zm00025ab268810_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab269030 Zm00025ab269030_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab269030 Zm00025ab269030_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab269030 Zm00025ab269030_P001 manual PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab269040 Zm00025ab269040_P001 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00025ab269130 Zm00025ab269130_P003 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab269300 Zm00025ab269300_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab269300 Zm00025ab269300_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab269310 Zm00025ab269310_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab269310 Zm00025ab269310_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab269310 Zm00025ab269310_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab269370 Zm00025ab269370_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab269370 Zm00025ab269370_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab269370 Zm00025ab269370_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab269370 Zm00025ab269370_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00025ab269460 Zm00025ab269460_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) RXN-2962 EC-1.1.1.284 Zm00025ab269460 Zm00025ab269460_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab269470 Zm00025ab269470_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab269470 Zm00025ab269470_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab269470 Zm00025ab269470_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab269470 Zm00025ab269470_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab269650 Zm00025ab269650_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab269680 Zm00025ab269680_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00025ab269840 Zm00025ab269840_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00025ab269840 Zm00025ab269840_P002 viridiplantae SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab269970 Zm00025ab269970_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab269970 Zm00025ab269970_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab269970 Zm00025ab269970_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab269970 Zm00025ab269970_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab269970 Zm00025ab269970_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab270150 Zm00025ab270150_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab270270 Zm00025ab270270_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab270270 Zm00025ab270270_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab270270 Zm00025ab270270_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab270270 Zm00025ab270270_P001 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis HOMOSERKIN-RXN EC-2.7.1.39 Zm00025ab270280 Zm00025ab270280_P001 viridiplantae PWY-702 L-methionine biosynthesis II (plants) HOMOSERKIN-RXN EC-2.7.1.39 Zm00025ab270280 Zm00025ab270280_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab270330 Zm00025ab270330_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab270340 Zm00025ab270340_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab270350 Zm00025ab270350_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab270350 Zm00025ab270350_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab270350 Zm00025ab270350_P003 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab270380 Zm00025ab270380_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab270480 Zm00025ab270480_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab270480 Zm00025ab270480_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab270480 Zm00025ab270480_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab270480 Zm00025ab270480_P001 NA PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab270520 Zm00025ab270520_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab270700 Zm00025ab270700_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab270700 Zm00025ab270700_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab270700 Zm00025ab270700_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab270800 Zm00025ab270800_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab270800 Zm00025ab270800_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab270800 Zm00025ab270800_P003 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab270890 Zm00025ab270890_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab270920 Zm00025ab270920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab270920 Zm00025ab270920_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab270920 Zm00025ab270920_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab271180 Zm00025ab271180_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab271180 Zm00025ab271180_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab271180 Zm00025ab271180_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab271180 Zm00025ab271180_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P006 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab271240 Zm00025ab271240_P006 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab271270 Zm00025ab271270_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab271270 Zm00025ab271270_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab271340 Zm00025ab271340_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab271410 Zm00025ab271410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab271410 Zm00025ab271410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab271410 Zm00025ab271410_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab271520 Zm00025ab271520_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab271520 Zm00025ab271520_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab271520 Zm00025ab271520_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab271590 Zm00025ab271590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab271590 Zm00025ab271590_P002 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab271640 Zm00025ab271640_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab271670 Zm00025ab271670_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab271780 Zm00025ab271780_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab272010 Zm00025ab272010_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab272030 Zm00025ab272030_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab272090 Zm00025ab272090_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00025ab272130 Zm00025ab272130_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00025ab272130 Zm00025ab272130_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab272180 Zm00025ab272180_P002 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab272360 Zm00025ab272360_P003 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab272630 Zm00025ab272630_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab272660 Zm00025ab272660_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P004 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P005 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P006 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00025ab272730 Zm00025ab272730_P006 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P001 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P001 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P002 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P002 NA PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab272850 Zm00025ab272850_P003 viridiplantae DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P004 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P004 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P005 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P005 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P006 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P006 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P007 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P007 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P008 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P008 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P009 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00025ab272850 Zm00025ab272850_P009 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab273280 Zm00025ab273280_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab273280 Zm00025ab273280_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab273280 Zm00025ab273280_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab273290 Zm00025ab273290_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab273290 Zm00025ab273290_P001 conditional PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273680 Zm00025ab273680_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273680 Zm00025ab273680_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273680 Zm00025ab273680_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P002 NA PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00025ab273700 Zm00025ab273700_P003 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P004 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P004 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P004 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P005 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P005 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab273700 Zm00025ab273700_P005 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P004 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P005 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P005 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P005 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P005 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab273800 Zm00025ab273800_P005 NA GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00025ab273810 Zm00025ab273810_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab275890 Zm00025ab275890_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab275890 Zm00025ab275890_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00025ab275920 Zm00025ab275920_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00025ab275920 Zm00025ab275920_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab275930 Zm00025ab275930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab275930 Zm00025ab275930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab275930 Zm00025ab275930_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab275980 Zm00025ab275980_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab275980 Zm00025ab275980_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab276160 Zm00025ab276160_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab276180 Zm00025ab276180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab276180 Zm00025ab276180_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab276180 Zm00025ab276180_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab276180 Zm00025ab276180_P004 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab276200 Zm00025ab276200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab276200 Zm00025ab276200_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab276200 Zm00025ab276200_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00025ab276220 Zm00025ab276220_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00025ab276220 Zm00025ab276220_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00025ab276220 Zm00025ab276220_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00025ab276330 Zm00025ab276330_P004 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab276350 Zm00025ab276350_P003 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab276620 Zm00025ab276620_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab276620 Zm00025ab276620_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab276620 Zm00025ab276620_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab276620 Zm00025ab276620_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab276620 Zm00025ab276620_P005 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab276720 Zm00025ab276720_P001 expected PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00025ab276770 Zm00025ab276770_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00025ab276770 Zm00025ab276770_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00025ab276770 Zm00025ab276770_P003 ubiquitous PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab277510 Zm00025ab277510_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab277510 Zm00025ab277510_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab277510 Zm00025ab277510_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab277510 Zm00025ab277510_P004 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab277510 Zm00025ab277510_P004 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab277510 Zm00025ab277510_P005 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab277530 Zm00025ab277530_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab277530 Zm00025ab277530_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab277530 Zm00025ab277530_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab277590 Zm00025ab277590_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab277760 Zm00025ab277760_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab277760 Zm00025ab277760_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab277760 Zm00025ab277760_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab277760 Zm00025ab277760_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab277850 Zm00025ab277850_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab277850 Zm00025ab277850_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab277850 Zm00025ab277850_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab277850 Zm00025ab277850_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab277960 Zm00025ab277960_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab278160 Zm00025ab278160_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab278360 Zm00025ab278360_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab278370 Zm00025ab278370_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab278460 Zm00025ab278460_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab278460 Zm00025ab278460_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab278460 Zm00025ab278460_P003 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab278460 Zm00025ab278460_P004 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00025ab278460 Zm00025ab278460_P005 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab279040 Zm00025ab279040_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab279050 Zm00025ab279050_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab279070 Zm00025ab279070_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab279440 Zm00025ab279440_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab279460 Zm00025ab279460_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab279600 Zm00025ab279600_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab279600 Zm00025ab279600_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab279600 Zm00025ab279600_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab279600 Zm00025ab279600_P001 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab279940 Zm00025ab279940_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab279990 Zm00025ab279990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab279990 Zm00025ab279990_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab279990 Zm00025ab279990_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab279990 Zm00025ab279990_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab279990 Zm00025ab279990_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab280000 Zm00025ab280000_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab280000 Zm00025ab280000_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab280000 Zm00025ab280000_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab280000 Zm00025ab280000_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00025ab280000 Zm00025ab280000_P005 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab280790 Zm00025ab280790_P001 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab281000 Zm00025ab281000_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab281140 Zm00025ab281140_P001 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00025ab281410 Zm00025ab281410_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00025ab281410 Zm00025ab281410_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00025ab281600 Zm00025ab281600_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab281690 Zm00025ab281690_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab281710 Zm00025ab281710_P001 conditional PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00025ab281740 Zm00025ab281740_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab281800 Zm00025ab281800_P001 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab281860 Zm00025ab281860_P004 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab282040 Zm00025ab282040_P003 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab282070 Zm00025ab282070_P005 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab282200 Zm00025ab282200_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab282220 Zm00025ab282220_P001 viridiplantae PWY-5284 shisonin biosynthesis RXN-8204 EC-2.3.1.215 Zm00025ab282230 Zm00025ab282230_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8204 EC-2.3.1.215 Zm00025ab282230 Zm00025ab282230_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab282500 Zm00025ab282500_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab282500 Zm00025ab282500_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab282610 Zm00025ab282610_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab282790 Zm00025ab282790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab282790 Zm00025ab282790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab282790 Zm00025ab282790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab282800 Zm00025ab282800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab282800 Zm00025ab282800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab282800 Zm00025ab282800_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab282830 Zm00025ab282830_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab282830 Zm00025ab282830_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab282830 Zm00025ab282830_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab282930 Zm00025ab282930_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab282930 Zm00025ab282930_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab283140 Zm00025ab283140_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab283150 Zm00025ab283150_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab283150 Zm00025ab283150_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab283150 Zm00025ab283150_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab283150 Zm00025ab283150_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab283150 Zm00025ab283150_P005 NA PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab283280 Zm00025ab283280_P001 viridiplantae PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P001 ubiquitous PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P002 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab283290 Zm00025ab283290_P002 ubiquitous PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab283310 Zm00025ab283310_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab283310 Zm00025ab283310_P002 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00025ab283410 Zm00025ab283410_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab283500 Zm00025ab283500_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab283500 Zm00025ab283500_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab283500 Zm00025ab283500_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab283500 Zm00025ab283500_P004 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab283610 Zm00025ab283610_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab283640 Zm00025ab283640_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab283650 Zm00025ab283650_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab283720 Zm00025ab283720_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab283720 Zm00025ab283720_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab283720 Zm00025ab283720_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab283720 Zm00025ab283720_P004 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00025ab284130 Zm00025ab284130_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00025ab284150 Zm00025ab284150_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab284260 Zm00025ab284260_P001 viridiplantae PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00025ab284380 Zm00025ab284380_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab284380 Zm00025ab284380_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab284390 Zm00025ab284390_P001 conditional PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P001 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P002 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P003 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P004 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00025ab284440 Zm00025ab284440_P005 NA PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00025ab284530 Zm00025ab284530_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00025ab284530 Zm00025ab284530_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00025ab284530 Zm00025ab284530_P003 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab284570 Zm00025ab284570_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab284570 Zm00025ab284570_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab284570 Zm00025ab284570_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab284570 Zm00025ab284570_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab284690 Zm00025ab284690_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab284690 Zm00025ab284690_P001 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab284710 Zm00025ab284710_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab284810 Zm00025ab284810_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab284900 Zm00025ab284900_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab284900 Zm00025ab284900_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab284980 Zm00025ab284980_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab285440 Zm00025ab285440_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab285440 Zm00025ab285440_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P002 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P002 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P002 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P003 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P003 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P003 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P003 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P004 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P004 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P004 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P004 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P005 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P005 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P005 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab285670 Zm00025ab285670_P005 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab285700 Zm00025ab285700_P001 excluded PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab286010 Zm00025ab286010_P001 conditional LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab286130 Zm00025ab286130_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00025ab286130 Zm00025ab286130_P001 NA PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab286310 Zm00025ab286310_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab286310 Zm00025ab286310_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab286460 Zm00025ab286460_P003 ubiquitous PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00025ab286520 Zm00025ab286520_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab286670 Zm00025ab286670_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab286860 Zm00025ab286860_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab286860 Zm00025ab286860_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab286860 Zm00025ab286860_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab286910 Zm00025ab286910_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab286910 Zm00025ab286910_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab286910 Zm00025ab286910_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab286910 Zm00025ab286910_P004 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab286910 Zm00025ab286910_P005 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00025ab286980 Zm00025ab286980_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab287050 Zm00025ab287050_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab287050 Zm00025ab287050_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab287610 Zm00025ab287610_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab287630 Zm00025ab287630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab287630 Zm00025ab287630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab287630 Zm00025ab287630_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab287780 Zm00025ab287780_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab287780 Zm00025ab287780_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab287860 Zm00025ab287860_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab287860 Zm00025ab287860_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab287910 Zm00025ab287910_P002 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab288060 Zm00025ab288060_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab288060 Zm00025ab288060_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab288060 Zm00025ab288060_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab288130 Zm00025ab288130_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab288130 Zm00025ab288130_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab288170 Zm00025ab288170_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab288240 Zm00025ab288240_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab288270 Zm00025ab288270_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab288270 Zm00025ab288270_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab288270 Zm00025ab288270_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288480 Zm00025ab288480_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288480 Zm00025ab288480_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288480 Zm00025ab288480_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab288500 Zm00025ab288500_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab288540 Zm00025ab288540_P005 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab288620 Zm00025ab288620_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab288660 Zm00025ab288660_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab288690 Zm00025ab288690_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab288690 Zm00025ab288690_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab288710 Zm00025ab288710_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab288710 Zm00025ab288710_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab288710 Zm00025ab288710_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab288710 Zm00025ab288710_P004 viridiplantae PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab288810 Zm00025ab288810_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab288810 Zm00025ab288810_P001 expected PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab288950 Zm00025ab288950_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab288980 Zm00025ab288980_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab289060 Zm00025ab289060_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab289140 Zm00025ab289140_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab289210 Zm00025ab289210_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab289210 Zm00025ab289210_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab289210 Zm00025ab289210_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab289210 Zm00025ab289210_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab289210 Zm00025ab289210_P005 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P004 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab289300 Zm00025ab289300_P005 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00025ab289350 Zm00025ab289350_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab289460 Zm00025ab289460_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab289460 Zm00025ab289460_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00025ab289500 Zm00025ab289500_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00025ab289520 Zm00025ab289520_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00025ab289520 Zm00025ab289520_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00025ab289520 Zm00025ab289520_P001 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab289570 Zm00025ab289570_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab289610 Zm00025ab289610_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab289610 Zm00025ab289610_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab289700 Zm00025ab289700_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab289700 Zm00025ab289700_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab289700 Zm00025ab289700_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab289700 Zm00025ab289700_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab289730 Zm00025ab289730_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab289730 Zm00025ab289730_P002 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00025ab289810 Zm00025ab289810_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P001 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00025ab289810 Zm00025ab289810_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00025ab289810 Zm00025ab289810_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P003 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P003 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P003 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P003 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P003 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00025ab289810 Zm00025ab289810_P004 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P004 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P004 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P004 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P004 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab289810 Zm00025ab289810_P004 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab289990 Zm00025ab289990_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab290330 Zm00025ab290330_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab290330 Zm00025ab290330_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab290370 Zm00025ab290370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab290510 Zm00025ab290510_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab290630 Zm00025ab290630_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab290630 Zm00025ab290630_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab290670 Zm00025ab290670_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab290740 Zm00025ab290740_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab290740 Zm00025ab290740_P002 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P004 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P004 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P005 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P005 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab290810 Zm00025ab290810_P006 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab290810 Zm00025ab290810_P006 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab290930 Zm00025ab290930_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab290930 Zm00025ab290930_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab290960 Zm00025ab290960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab290960 Zm00025ab290960_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab290960 Zm00025ab290960_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab291170 Zm00025ab291170_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab291170 Zm00025ab291170_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab291170 Zm00025ab291170_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab291170 Zm00025ab291170_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab291200 Zm00025ab291200_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab291290 Zm00025ab291290_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab291310 Zm00025ab291310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab291360 Zm00025ab291360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab291360 Zm00025ab291360_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab291360 Zm00025ab291360_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab291360 Zm00025ab291360_P004 viridiplantae PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab291380 Zm00025ab291380_P001 conditional PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab291490 Zm00025ab291490_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab291670 Zm00025ab291670_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab291670 Zm00025ab291670_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab291670 Zm00025ab291670_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab291690 Zm00025ab291690_P001 expected PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab291740 Zm00025ab291740_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab291740 Zm00025ab291740_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab291740 Zm00025ab291740_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab291750 Zm00025ab291750_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab291750 Zm00025ab291750_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab291750 Zm00025ab291750_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab291750 Zm00025ab291750_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab291810 Zm00025ab291810_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab291810 Zm00025ab291810_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab291810 Zm00025ab291810_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab291810 Zm00025ab291810_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab291870 Zm00025ab291870_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab291920 Zm00025ab291920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab291920 Zm00025ab291920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab291920 Zm00025ab291920_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab292080 Zm00025ab292080_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab292080 Zm00025ab292080_P006 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab292340 Zm00025ab292340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab292340 Zm00025ab292340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab292340 Zm00025ab292340_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab292390 Zm00025ab292390_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab292410 Zm00025ab292410_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab292410 Zm00025ab292410_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab292410 Zm00025ab292410_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab292520 Zm00025ab292520_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab292520 Zm00025ab292520_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00025ab292640 Zm00025ab292640_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00025ab292640 Zm00025ab292640_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab292700 Zm00025ab292700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab292700 Zm00025ab292700_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab292700 Zm00025ab292700_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab292700 Zm00025ab292700_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab292700 Zm00025ab292700_P005 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab292770 Zm00025ab292770_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab292770 Zm00025ab292770_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab292840 Zm00025ab292840_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab292850 Zm00025ab292850_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab292850 Zm00025ab292850_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab292850 Zm00025ab292850_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab292850 Zm00025ab292850_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00025ab292900 Zm00025ab292900_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab292970 Zm00025ab292970_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab292990 Zm00025ab292990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab292990 Zm00025ab292990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab292990 Zm00025ab292990_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab292990 Zm00025ab292990_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab292990 Zm00025ab292990_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab293090 Zm00025ab293090_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab293090 Zm00025ab293090_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab293110 Zm00025ab293110_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab293110 Zm00025ab293110_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab293160 Zm00025ab293160_P003 NA PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab293210 Zm00025ab293210_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00025ab293210 Zm00025ab293210_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab293340 Zm00025ab293340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293340 Zm00025ab293340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293340 Zm00025ab293340_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab293350 Zm00025ab293350_P003 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab293480 Zm00025ab293480_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab293480 Zm00025ab293480_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab293480 Zm00025ab293480_P003 conditional PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00025ab293920 Zm00025ab293920_P001 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00025ab293920 Zm00025ab293920_P002 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00025ab293920 Zm00025ab293920_P003 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00025ab294020 Zm00025ab294020_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00025ab294020 Zm00025ab294020_P002 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab294050 Zm00025ab294050_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab294050 Zm00025ab294050_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab294100 Zm00025ab294100_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab294100 Zm00025ab294100_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab294100 Zm00025ab294100_P003 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab294150 Zm00025ab294150_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab294420 Zm00025ab294420_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab294440 Zm00025ab294440_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab294440 Zm00025ab294440_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab294440 Zm00025ab294440_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab294440 Zm00025ab294440_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab294450 Zm00025ab294450_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab294450 Zm00025ab294450_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab294510 Zm00025ab294510_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab294530 Zm00025ab294530_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab294530 Zm00025ab294530_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab294530 Zm00025ab294530_P001 manual PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab294820 Zm00025ab294820_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab294980 Zm00025ab294980_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab295140 Zm00025ab295140_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab295140 Zm00025ab295140_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab295150 Zm00025ab295150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab295150 Zm00025ab295150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab295150 Zm00025ab295150_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab295150 Zm00025ab295150_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab295150 Zm00025ab295150_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab295180 Zm00025ab295180_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab295180 Zm00025ab295180_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab295180 Zm00025ab295180_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab295180 Zm00025ab295180_P004 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab295240 Zm00025ab295240_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab295250 Zm00025ab295250_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab295270 Zm00025ab295270_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab295270 Zm00025ab295270_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab295280 Zm00025ab295280_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab295280 Zm00025ab295280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab295280 Zm00025ab295280_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab295350 Zm00025ab295350_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab295350 Zm00025ab295350_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab295350 Zm00025ab295350_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab295350 Zm00025ab295350_P004 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab295360 Zm00025ab295360_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab295360 Zm00025ab295360_P003 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab295360 Zm00025ab295360_P004 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab295360 Zm00025ab295360_P005 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00025ab295370 Zm00025ab295370_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab295430 Zm00025ab295430_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab295430 Zm00025ab295430_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab295430 Zm00025ab295430_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab295800 Zm00025ab295800_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab295820 Zm00025ab295820_P002 conditional PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00025ab295880 Zm00025ab295880_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab296060 Zm00025ab296060_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab296060 Zm00025ab296060_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab296080 Zm00025ab296080_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab296270 Zm00025ab296270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab296270 Zm00025ab296270_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab296270 Zm00025ab296270_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab296370 Zm00025ab296370_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00025ab296390 Zm00025ab296390_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab296480 Zm00025ab296480_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab296500 Zm00025ab296500_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab296500 Zm00025ab296500_P002 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab296650 Zm00025ab296650_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab296650 Zm00025ab296650_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P003 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P004 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P005 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab296730 Zm00025ab296730_P005 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab296780 Zm00025ab296780_P005 ubiquitous GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296890 Zm00025ab296890_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab296900 Zm00025ab296900_P002 manual MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00025ab297170 Zm00025ab297170_P001 viridiplantae PWY-5068 chlorophyll cycle RXN1F-66 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN1F-66 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-7663 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P001 expected PWY-5068 chlorophyll cycle RXN1F-66 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P002 expected PWY-5086 chlorophyll a biosynthesis I RXN1F-66 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P002 expected PWY-5064 chlorophyll a biosynthesis II RXN-7663 EC-2.5.1.62 Zm00025ab297190 Zm00025ab297190_P002 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab297680 Zm00025ab297680_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab297950 Zm00025ab297950_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab298260 Zm00025ab298260_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab298500 Zm00025ab298500_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab298530 Zm00025ab298530_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab298530 Zm00025ab298530_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab298530 Zm00025ab298530_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab298530 Zm00025ab298530_P002 conditional HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00025ab298730 Zm00025ab298730_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00025ab298730 Zm00025ab298730_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00025ab298730 Zm00025ab298730_P003 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab298820 Zm00025ab298820_P001 expected PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298920 Zm00025ab298920_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P004 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P005 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P006 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P006 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P007 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P007 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P007 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P008 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P008 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P008 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P009 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P009 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab298930 Zm00025ab298930_P009 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab298990 Zm00025ab298990_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab298990 Zm00025ab298990_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab298990 Zm00025ab298990_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab299040 Zm00025ab299040_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab299040 Zm00025ab299040_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab299080 Zm00025ab299080_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab299140 Zm00025ab299140_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab299150 Zm00025ab299150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab299150 Zm00025ab299150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab299150 Zm00025ab299150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab299160 Zm00025ab299160_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab299160 Zm00025ab299160_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab299160 Zm00025ab299160_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab299300 Zm00025ab299300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab299300 Zm00025ab299300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab299300 Zm00025ab299300_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P005 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P005 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P005 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P005 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab299310 Zm00025ab299310_P005 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab299350 Zm00025ab299350_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab299480 Zm00025ab299480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab299480 Zm00025ab299480_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab299480 Zm00025ab299480_P003 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab299770 Zm00025ab299770_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab299770 Zm00025ab299770_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P005 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P005 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P005 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P006 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab300510 Zm00025ab300510_P006 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P006 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P006 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P006 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab300510 Zm00025ab300510_P006 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab300560 Zm00025ab300560_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab300560 Zm00025ab300560_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab300760 Zm00025ab300760_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab300760 Zm00025ab300760_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab300760 Zm00025ab300760_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab300760 Zm00025ab300760_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab300760 Zm00025ab300760_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab300760 Zm00025ab300760_P002 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab300810 Zm00025ab300810_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab300810 Zm00025ab300810_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab300840 Zm00025ab300840_P002 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab300870 Zm00025ab300870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab300870 Zm00025ab300870_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab301070 Zm00025ab301070_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab301070 Zm00025ab301070_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab301070 Zm00025ab301070_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab301150 Zm00025ab301150_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab301150 Zm00025ab301150_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab301150 Zm00025ab301150_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab301150 Zm00025ab301150_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab301610 Zm00025ab301610_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab301650 Zm00025ab301650_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab301650 Zm00025ab301650_P002 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab301650 Zm00025ab301650_P003 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00025ab301990 Zm00025ab301990_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00025ab301990 Zm00025ab301990_P002 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00025ab301990 Zm00025ab301990_P003 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00025ab301990 Zm00025ab301990_P004 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab302090 Zm00025ab302090_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab302090 Zm00025ab302090_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab302090 Zm00025ab302090_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab302090 Zm00025ab302090_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab302090 Zm00025ab302090_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab302240 Zm00025ab302240_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab302240 Zm00025ab302240_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab302240 Zm00025ab302240_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab302530 Zm00025ab302530_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab302530 Zm00025ab302530_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab302530 Zm00025ab302530_P005 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab302540 Zm00025ab302540_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab302540 Zm00025ab302540_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab302540 Zm00025ab302540_P003 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00025ab302590 Zm00025ab302590_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00025ab302590 Zm00025ab302590_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab302850 Zm00025ab302850_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab303010 Zm00025ab303010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab303010 Zm00025ab303010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab303010 Zm00025ab303010_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab303020 Zm00025ab303020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab303020 Zm00025ab303020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab303020 Zm00025ab303020_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P004 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P004 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00025ab303200 Zm00025ab303200_P004 NA SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00025ab303270 Zm00025ab303270_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00025ab303270 Zm00025ab303270_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00025ab303270 Zm00025ab303270_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab303320 Zm00025ab303320_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab303330 Zm00025ab303330_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab303460 Zm00025ab303460_P003 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab303710 Zm00025ab303710_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00025ab303710 Zm00025ab303710_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab303790 Zm00025ab303790_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab303990 Zm00025ab303990_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab304090 Zm00025ab304090_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab304270 Zm00025ab304270_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab304270 Zm00025ab304270_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab304270 Zm00025ab304270_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab304270 Zm00025ab304270_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab304270 Zm00025ab304270_P005 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab304340 Zm00025ab304340_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab304340 Zm00025ab304340_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab304350 Zm00025ab304350_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab304350 Zm00025ab304350_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P003 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab304510 Zm00025ab304510_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab304660 Zm00025ab304660_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab304680 Zm00025ab304680_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab304680 Zm00025ab304680_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab304680 Zm00025ab304680_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab304790 Zm00025ab304790_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab304900 Zm00025ab304900_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab305050 Zm00025ab305050_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab305050 Zm00025ab305050_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab305060 Zm00025ab305060_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab305090 Zm00025ab305090_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab305090 Zm00025ab305090_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab305090 Zm00025ab305090_P002 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab305090 Zm00025ab305090_P002 excluded PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab305120 Zm00025ab305120_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab305150 Zm00025ab305150_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab305150 Zm00025ab305150_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab305180 Zm00025ab305180_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab305180 Zm00025ab305180_P001 conditional ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P001 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P002 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P003 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab305240 Zm00025ab305240_P005 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab305390 Zm00025ab305390_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab305390 Zm00025ab305390_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab305390 Zm00025ab305390_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab305390 Zm00025ab305390_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab305490 Zm00025ab305490_P004 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab305520 Zm00025ab305520_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab305750 Zm00025ab305750_P004 ubiquitous PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab305830 Zm00025ab305830_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab305830 Zm00025ab305830_P001 expected HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab305850 Zm00025ab305850_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab305860 Zm00025ab305860_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab305870 Zm00025ab305870_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab305870 Zm00025ab305870_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab305870 Zm00025ab305870_P003 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab306070 Zm00025ab306070_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00025ab306070 Zm00025ab306070_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab306250 Zm00025ab306250_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab306250 Zm00025ab306250_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab306290 Zm00025ab306290_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab306290 Zm00025ab306290_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab306340 Zm00025ab306340_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab306390 Zm00025ab306390_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab306390 Zm00025ab306390_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab306390 Zm00025ab306390_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00025ab306580 Zm00025ab306580_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab306610 Zm00025ab306610_P001 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab306750 Zm00025ab306750_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab306860 Zm00025ab306860_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab307130 Zm00025ab307130_P001 ubiquitous UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab307140 Zm00025ab307140_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab307350 Zm00025ab307350_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab307350 Zm00025ab307350_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab307350 Zm00025ab307350_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab307480 Zm00025ab307480_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab307480 Zm00025ab307480_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab307480 Zm00025ab307480_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307550 Zm00025ab307550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307550 Zm00025ab307550_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307550 Zm00025ab307550_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307550 Zm00025ab307550_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307550 Zm00025ab307550_P005 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab307560 Zm00025ab307560_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab307560 Zm00025ab307560_P002 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab307560 Zm00025ab307560_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab307580 Zm00025ab307580_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab307650 Zm00025ab307650_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab307650 Zm00025ab307650_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab307660 Zm00025ab307660_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab307660 Zm00025ab307660_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab307670 Zm00025ab307670_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab307690 Zm00025ab307690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab307690 Zm00025ab307690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab307690 Zm00025ab307690_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307710 Zm00025ab307710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307710 Zm00025ab307710_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307710 Zm00025ab307710_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab307710 Zm00025ab307710_P004 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab307780 Zm00025ab307780_P001 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab308110 Zm00025ab308110_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab308110 Zm00025ab308110_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab308110 Zm00025ab308110_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab308110 Zm00025ab308110_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab308110 Zm00025ab308110_P005 viridiplantae PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab308190 Zm00025ab308190_P001 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab308190 Zm00025ab308190_P002 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00025ab308190 Zm00025ab308190_P002 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab308190 Zm00025ab308190_P002 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00025ab308190 Zm00025ab308190_P002 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00025ab308190 Zm00025ab308190_P002 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab308190 Zm00025ab308190_P003 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00025ab308190 Zm00025ab308190_P003 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab308190 Zm00025ab308190_P003 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00025ab308190 Zm00025ab308190_P003 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00025ab308190 Zm00025ab308190_P003 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00025ab308480 Zm00025ab308480_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00025ab308480 Zm00025ab308480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab308590 Zm00025ab308590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab308590 Zm00025ab308590_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab308740 Zm00025ab308740_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab308760 Zm00025ab308760_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab308760 Zm00025ab308760_P001 viridiplantae PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab308880 Zm00025ab308880_P002 ubiquitous PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab308890 Zm00025ab308890_P001 excluded PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab308960 Zm00025ab308960_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab309120 Zm00025ab309120_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab309120 Zm00025ab309120_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab309120 Zm00025ab309120_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab309120 Zm00025ab309120_P002 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab309230 Zm00025ab309230_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab309240 Zm00025ab309240_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab309250 Zm00025ab309250_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab309330 Zm00025ab309330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309330 Zm00025ab309330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309330 Zm00025ab309330_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab309340 Zm00025ab309340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309340 Zm00025ab309340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309340 Zm00025ab309340_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab309350 Zm00025ab309350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309350 Zm00025ab309350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309350 Zm00025ab309350_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab309360 Zm00025ab309360_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab309390 Zm00025ab309390_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00025ab309500 Zm00025ab309500_P001 conditional PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab309560 Zm00025ab309560_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab309560 Zm00025ab309560_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab309560 Zm00025ab309560_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab309560 Zm00025ab309560_P002 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab309560 Zm00025ab309560_P002 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab309560 Zm00025ab309560_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00025ab309560 Zm00025ab309560_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00025ab309560 Zm00025ab309560_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab309590 Zm00025ab309590_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab309650 Zm00025ab309650_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00025ab309660 Zm00025ab309660_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab310400 Zm00025ab310400_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab310600 Zm00025ab310600_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab310860 Zm00025ab310860_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab310860 Zm00025ab310860_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab310860 Zm00025ab310860_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab310860 Zm00025ab310860_P002 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab310880 Zm00025ab310880_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab310880 Zm00025ab310880_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab310880 Zm00025ab310880_P003 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab310920 Zm00025ab310920_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab310920 Zm00025ab310920_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab311030 Zm00025ab311030_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab311120 Zm00025ab311120_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab311120 Zm00025ab311120_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab311120 Zm00025ab311120_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P003 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P004 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P005 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab311130 Zm00025ab311130_P006 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab311200 Zm00025ab311200_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab311440 Zm00025ab311440_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab311440 Zm00025ab311440_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab311440 Zm00025ab311440_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab311460 Zm00025ab311460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab311460 Zm00025ab311460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab311460 Zm00025ab311460_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab311470 Zm00025ab311470_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab311470 Zm00025ab311470_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab311470 Zm00025ab311470_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab311490 Zm00025ab311490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab311490 Zm00025ab311490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab311490 Zm00025ab311490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab311500 Zm00025ab311500_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab311500 Zm00025ab311500_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab311500 Zm00025ab311500_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab311540 Zm00025ab311540_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab311540 Zm00025ab311540_P002 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab311590 Zm00025ab311590_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab311590 Zm00025ab311590_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) GALACTURIDYLYLTRANS-RXN EC-2.7.7.12 Zm00025ab311850 Zm00025ab311850_P005 expected PWY-6527 stachyose degradation GALACTURIDYLYLTRANS-RXN EC-2.7.7.12 Zm00025ab311850 Zm00025ab311850_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab312120 Zm00025ab312120_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab312120 Zm00025ab312120_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00025ab312120 Zm00025ab312120_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab312290 Zm00025ab312290_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab312290 Zm00025ab312290_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab312290 Zm00025ab312290_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00025ab312290 Zm00025ab312290_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab312350 Zm00025ab312350_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab312440 Zm00025ab312440_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab312440 Zm00025ab312440_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab312440 Zm00025ab312440_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab312440 Zm00025ab312440_P002 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab312550 Zm00025ab312550_P002 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab312760 Zm00025ab312760_P002 conditional PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00025ab312920 Zm00025ab312920_P001 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00025ab312920 Zm00025ab312920_P002 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00025ab312920 Zm00025ab312920_P003 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00025ab312920 Zm00025ab312920_P004 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab313030 Zm00025ab313030_P001 expected VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00025ab313050 Zm00025ab313050_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab313090 Zm00025ab313090_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab313090 Zm00025ab313090_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab313090 Zm00025ab313090_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab313090 Zm00025ab313090_P001 expected GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00025ab313360 Zm00025ab313360_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab313700 Zm00025ab313700_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab313720 Zm00025ab313720_P001 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab313840 Zm00025ab313840_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab313840 Zm00025ab313840_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab313840 Zm00025ab313840_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab313840 Zm00025ab313840_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab313840 Zm00025ab313840_P005 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab313860 Zm00025ab313860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab313860 Zm00025ab313860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab313860 Zm00025ab313860_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab313950 Zm00025ab313950_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab314070 Zm00025ab314070_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab314070 Zm00025ab314070_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab314070 Zm00025ab314070_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00025ab314070 Zm00025ab314070_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab314080 Zm00025ab314080_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab314180 Zm00025ab314180_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab314360 Zm00025ab314360_P001 NA PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab314480 Zm00025ab314480_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab314480 Zm00025ab314480_P002 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab314480 Zm00025ab314480_P003 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab314480 Zm00025ab314480_P004 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab314480 Zm00025ab314480_P005 expected PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab314560 Zm00025ab314560_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab314560 Zm00025ab314560_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00025ab314560 Zm00025ab314560_P003 NA VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab314630 Zm00025ab314630_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab314630 Zm00025ab314630_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab314630 Zm00025ab314630_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab314630 Zm00025ab314630_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab314740 Zm00025ab314740_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314840 Zm00025ab314840_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314850 Zm00025ab314850_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314880 Zm00025ab314880_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314900 Zm00025ab314900_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314900 Zm00025ab314900_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314960 Zm00025ab314960_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314960 Zm00025ab314960_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00025ab314960 Zm00025ab314960_P003 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab314970 Zm00025ab314970_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315070 Zm00025ab315070_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315070 Zm00025ab315070_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315070 Zm00025ab315070_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315090 Zm00025ab315090_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315090 Zm00025ab315090_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab315090 Zm00025ab315090_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab315380 Zm00025ab315380_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab315380 Zm00025ab315380_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab315500 Zm00025ab315500_P002 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab315500 Zm00025ab315500_P002 ubiquitous PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab315840 Zm00025ab315840_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab315840 Zm00025ab315840_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00025ab315840 Zm00025ab315840_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab315960 Zm00025ab315960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab316030 Zm00025ab316030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab316030 Zm00025ab316030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab316030 Zm00025ab316030_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab316060 Zm00025ab316060_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab316140 Zm00025ab316140_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab316150 Zm00025ab316150_P001 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab316200 Zm00025ab316200_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab316200 Zm00025ab316200_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab316200 Zm00025ab316200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab316200 Zm00025ab316200_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab316260 Zm00025ab316260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab316530 Zm00025ab316530_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab316670 Zm00025ab316670_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab316690 Zm00025ab316690_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab316690 Zm00025ab316690_P002 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00025ab316690 Zm00025ab316690_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P004 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P005 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab316780 Zm00025ab316780_P006 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab316820 Zm00025ab316820_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab316820 Zm00025ab316820_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab316820 Zm00025ab316820_P003 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab316920 Zm00025ab316920_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab316970 Zm00025ab316970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab317100 Zm00025ab317100_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab317110 Zm00025ab317110_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab317110 Zm00025ab317110_P001 ubiquitous PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00025ab317170 Zm00025ab317170_P001 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00025ab317170 Zm00025ab317170_P003 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P005 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P006 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P007 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P008 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab317310 Zm00025ab317310_P009 expected PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P002 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P003 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab317410 Zm00025ab317410_P004 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab317410 Zm00025ab317410_P004 viridiplantae PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab317420 Zm00025ab317420_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab317420 Zm00025ab317420_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab317420 Zm00025ab317420_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab317420 Zm00025ab317420_P001 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab317540 Zm00025ab317540_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab317540 Zm00025ab317540_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab317540 Zm00025ab317540_P003 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab317630 Zm00025ab317630_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab317630 Zm00025ab317630_P001 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab317680 Zm00025ab317680_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab317680 Zm00025ab317680_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab317680 Zm00025ab317680_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab317680 Zm00025ab317680_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab317760 Zm00025ab317760_P001 viridiplantae PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab317840 Zm00025ab317840_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P005 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P006 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00025ab317890 Zm00025ab317890_P007 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab318030 Zm00025ab318030_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab318030 Zm00025ab318030_P002 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P002 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P002 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P003 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P003 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P004 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P004 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P005 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab318060 Zm00025ab318060_P005 excluded PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab318270 Zm00025ab318270_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab318270 Zm00025ab318270_P002 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00025ab318270 Zm00025ab318270_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab318530 Zm00025ab318530_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab318640 Zm00025ab318640_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab318710 Zm00025ab318710_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab318750 Zm00025ab318750_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P005 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P006 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P006 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P007 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab318760 Zm00025ab318760_P007 conditional PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00025ab318770 Zm00025ab318770_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00025ab318770 Zm00025ab318770_P001 expected PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab318800 Zm00025ab318800_P001 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab319430 Zm00025ab319430_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab319470 Zm00025ab319470_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab319470 Zm00025ab319470_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab319470 Zm00025ab319470_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab319740 Zm00025ab319740_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab319740 Zm00025ab319740_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab319740 Zm00025ab319740_P003 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00025ab319910 Zm00025ab319910_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00025ab319910 Zm00025ab319910_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00025ab319910 Zm00025ab319910_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00025ab319910 Zm00025ab319910_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab319930 Zm00025ab319930_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab319930 Zm00025ab319930_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab319930 Zm00025ab319930_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00025ab319940 Zm00025ab319940_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab319940 Zm00025ab319940_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab319940 Zm00025ab319940_P001 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab320030 Zm00025ab320030_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab320030 Zm00025ab320030_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab320030 Zm00025ab320030_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab320030 Zm00025ab320030_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00025ab320220 Zm00025ab320220_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab320220 Zm00025ab320220_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00025ab320220 Zm00025ab320220_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab320340 Zm00025ab320340_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab320340 Zm00025ab320340_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab320340 Zm00025ab320340_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab320340 Zm00025ab320340_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab320340 Zm00025ab320340_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab320340 Zm00025ab320340_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00025ab320360 Zm00025ab320360_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab320360 Zm00025ab320360_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00025ab320360 Zm00025ab320360_P001 NA PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00025ab320400 Zm00025ab320400_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab320510 Zm00025ab320510_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab320510 Zm00025ab320510_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab320550 Zm00025ab320550_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab320550 Zm00025ab320550_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab320570 Zm00025ab320570_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab320810 Zm00025ab320810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab320810 Zm00025ab320810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab320810 Zm00025ab320810_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P006 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab320840 Zm00025ab320840_P007 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab320860 Zm00025ab320860_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab320860 Zm00025ab320860_P002 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab321040 Zm00025ab321040_P002 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab321070 Zm00025ab321070_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab321080 Zm00025ab321080_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321100 Zm00025ab321100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321100 Zm00025ab321100_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321100 Zm00025ab321100_P003 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab321220 Zm00025ab321220_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab321220 Zm00025ab321220_P002 ubiquitous PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab321310 Zm00025ab321310_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab321310 Zm00025ab321310_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00025ab321310 Zm00025ab321310_P001 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab321360 Zm00025ab321360_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab321380 Zm00025ab321380_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab321380 Zm00025ab321380_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab321380 Zm00025ab321380_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab321380 Zm00025ab321380_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab321380 Zm00025ab321380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321440 Zm00025ab321440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321440 Zm00025ab321440_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321440 Zm00025ab321440_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321440 Zm00025ab321440_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab321440 Zm00025ab321440_P005 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab321470 Zm00025ab321470_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab321470 Zm00025ab321470_P002 NA PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00025ab321660 Zm00025ab321660_P001 expected PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab321720 Zm00025ab321720_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00025ab321720 Zm00025ab321720_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab321810 Zm00025ab321810_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab321810 Zm00025ab321810_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab321810 Zm00025ab321810_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab321810 Zm00025ab321810_P004 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00025ab321810 Zm00025ab321810_P005 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00025ab321930 Zm00025ab321930_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab322230 Zm00025ab322230_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab322230 Zm00025ab322230_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab322230 Zm00025ab322230_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P001 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P002 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P002 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P003 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P004 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P004 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P005 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P005 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P006 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P006 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00025ab322340 Zm00025ab322340_P006 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00025ab322610 Zm00025ab322610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab322640 Zm00025ab322640_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab322640 Zm00025ab322640_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab322740 Zm00025ab322740_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab322740 Zm00025ab322740_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab322740 Zm00025ab322740_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab322740 Zm00025ab322740_P004 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab323100 Zm00025ab323100_P002 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab323450 Zm00025ab323450_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab323450 Zm00025ab323450_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00025ab323450 Zm00025ab323450_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab323620 Zm00025ab323620_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab323620 Zm00025ab323620_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab323620 Zm00025ab323620_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab323620 Zm00025ab323620_P004 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab323760 Zm00025ab323760_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab323760 Zm00025ab323760_P002 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab323870 Zm00025ab323870_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab323870 Zm00025ab323870_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab323870 Zm00025ab323870_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab323870 Zm00025ab323870_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab323870 Zm00025ab323870_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab323870 Zm00025ab323870_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab323870 Zm00025ab323870_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab323870 Zm00025ab323870_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab323870 Zm00025ab323870_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab323870 Zm00025ab323870_P005 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323900 Zm00025ab323900_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323900 Zm00025ab323900_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323910 Zm00025ab323910_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323930 Zm00025ab323930_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323930 Zm00025ab323930_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab323930 Zm00025ab323930_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab324050 Zm00025ab324050_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab324050 Zm00025ab324050_P002 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab324180 Zm00025ab324180_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab324180 Zm00025ab324180_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab324280 Zm00025ab324280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab324410 Zm00025ab324410_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab325140 Zm00025ab325140_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab325140 Zm00025ab325140_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab325140 Zm00025ab325140_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab325140 Zm00025ab325140_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab325160 Zm00025ab325160_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab325220 Zm00025ab325220_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab325220 Zm00025ab325220_P002 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab325220 Zm00025ab325220_P003 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00025ab325220 Zm00025ab325220_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325300 Zm00025ab325300_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325300 Zm00025ab325300_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325360 Zm00025ab325360_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325360 Zm00025ab325360_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325360 Zm00025ab325360_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab325360 Zm00025ab325360_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab325370 Zm00025ab325370_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab325400 Zm00025ab325400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab325400 Zm00025ab325400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab325400 Zm00025ab325400_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab325490 Zm00025ab325490_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab325490 Zm00025ab325490_P002 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab325820 Zm00025ab325820_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab325940 Zm00025ab325940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab325940 Zm00025ab325940_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab325940 Zm00025ab325940_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab325940 Zm00025ab325940_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab325940 Zm00025ab325940_P003 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P002 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P003 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P004 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P004 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P005 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P005 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P006 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab326040 Zm00025ab326040_P006 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab326360 Zm00025ab326360_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00025ab326410 Zm00025ab326410_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00025ab326410 Zm00025ab326410_P001 conditional PWY-3841 folate transformations II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00025ab326610 Zm00025ab326610_P001 viridiplantae PWY-2161 folate polyglutamylation FORMATETHFLIG-RXN EC-6.3.4.3 Zm00025ab326610 Zm00025ab326610_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00025ab326610 Zm00025ab326610_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate FORMATETHFLIG-RXN EC-6.3.4.3 Zm00025ab326610 Zm00025ab326610_P001 excluded ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab326740 Zm00025ab326740_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab326780 Zm00025ab326780_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab326780 Zm00025ab326780_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab326780 Zm00025ab326780_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab326850 Zm00025ab326850_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab326850 Zm00025ab326850_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab326850 Zm00025ab326850_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab326850 Zm00025ab326850_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab326940 Zm00025ab326940_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab326940 Zm00025ab326940_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab326940 Zm00025ab326940_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327180 Zm00025ab327180_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327180 Zm00025ab327180_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327180 Zm00025ab327180_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327230 Zm00025ab327230_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327230 Zm00025ab327230_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327230 Zm00025ab327230_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327240 Zm00025ab327240_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327270 Zm00025ab327270_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327270 Zm00025ab327270_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327270 Zm00025ab327270_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327290 Zm00025ab327290_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327300 Zm00025ab327300_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327300 Zm00025ab327300_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327300 Zm00025ab327300_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab327310 Zm00025ab327310_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab327310 Zm00025ab327310_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab327310 Zm00025ab327310_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab327460 Zm00025ab327460_P004 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab327550 Zm00025ab327550_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab327640 Zm00025ab327640_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab327810 Zm00025ab327810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab327810 Zm00025ab327810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab327810 Zm00025ab327810_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab327820 Zm00025ab327820_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P003 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P003 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P004 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab327830 Zm00025ab327830_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab327890 Zm00025ab327890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab327890 Zm00025ab327890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab327890 Zm00025ab327890_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab328020 Zm00025ab328020_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab328020 Zm00025ab328020_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab328050 Zm00025ab328050_P004 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab328240 Zm00025ab328240_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab328240 Zm00025ab328240_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab328350 Zm00025ab328350_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00025ab328610 Zm00025ab328610_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00025ab328610 Zm00025ab328610_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329030 Zm00025ab329030_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329030 Zm00025ab329030_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329030 Zm00025ab329030_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329050 Zm00025ab329050_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329050 Zm00025ab329050_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329050 Zm00025ab329050_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab329050 Zm00025ab329050_P006 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab329080 Zm00025ab329080_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab329080 Zm00025ab329080_P002 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab329080 Zm00025ab329080_P003 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab329080 Zm00025ab329080_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab329130 Zm00025ab329130_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab329200 Zm00025ab329200_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab329540 Zm00025ab329540_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329560 Zm00025ab329560_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00025ab329640 Zm00025ab329640_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00025ab329640 Zm00025ab329640_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab329770 Zm00025ab329770_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P005 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab329880 Zm00025ab329880_P006 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab329910 Zm00025ab329910_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab329990 Zm00025ab329990_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab329990 Zm00025ab329990_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab330090 Zm00025ab330090_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab330130 Zm00025ab330130_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab330290 Zm00025ab330290_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab330380 Zm00025ab330380_P004 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab330390 Zm00025ab330390_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P004 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P005 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P005 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P006 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab330390 Zm00025ab330390_P006 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab330500 Zm00025ab330500_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab330500 Zm00025ab330500_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab330620 Zm00025ab330620_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab330620 Zm00025ab330620_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab330620 Zm00025ab330620_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab330620 Zm00025ab330620_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab330620 Zm00025ab330620_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab330620 Zm00025ab330620_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab330670 Zm00025ab330670_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P004 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P005 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab330830 Zm00025ab330830_P006 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab330960 Zm00025ab330960_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab330960 Zm00025ab330960_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab330960 Zm00025ab330960_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab330970 Zm00025ab330970_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab330970 Zm00025ab330970_P002 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331230 Zm00025ab331230_P002 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P004 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P005 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P005 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00025ab331340 Zm00025ab331340_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab331640 Zm00025ab331640_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab331640 Zm00025ab331640_P002 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab331740 Zm00025ab331740_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab331740 Zm00025ab331740_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab331740 Zm00025ab331740_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab331740 Zm00025ab331740_P004 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab331740 Zm00025ab331740_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab331900 Zm00025ab331900_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab331990 Zm00025ab331990_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab331990 Zm00025ab331990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab332080 Zm00025ab332080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00025ab332080 Zm00025ab332080_P001 conditional PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00025ab332090 Zm00025ab332090_P001 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00025ab332090 Zm00025ab332090_P001 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00025ab332090 Zm00025ab332090_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00025ab332090 Zm00025ab332090_P001 NA PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00025ab332090 Zm00025ab332090_P002 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00025ab332090 Zm00025ab332090_P002 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00025ab332090 Zm00025ab332090_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00025ab332090 Zm00025ab332090_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab332170 Zm00025ab332170_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab332170 Zm00025ab332170_P002 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab332230 Zm00025ab332230_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab332230 Zm00025ab332230_P001 viridiplantae PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab332280 Zm00025ab332280_P001 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab332280 Zm00025ab332280_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab332290 Zm00025ab332290_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab332290 Zm00025ab332290_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab332290 Zm00025ab332290_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab332400 Zm00025ab332400_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab332400 Zm00025ab332400_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab332400 Zm00025ab332400_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab332410 Zm00025ab332410_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab332410 Zm00025ab332410_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab332420 Zm00025ab332420_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab332420 Zm00025ab332420_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab332770 Zm00025ab332770_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab332790 Zm00025ab332790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab332790 Zm00025ab332790_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab332790 Zm00025ab332790_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab332790 Zm00025ab332790_P004 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab332870 Zm00025ab332870_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00025ab332870 Zm00025ab332870_P001 excluded PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P002 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab333330 Zm00025ab333330_P003 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab333390 Zm00025ab333390_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab333400 Zm00025ab333400_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab333400 Zm00025ab333400_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab333400 Zm00025ab333400_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab333660 Zm00025ab333660_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab333660 Zm00025ab333660_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab333660 Zm00025ab333660_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab333660 Zm00025ab333660_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab333750 Zm00025ab333750_P001 viridiplantae PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00025ab333790 Zm00025ab333790_P001 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00025ab333790 Zm00025ab333790_P001 expected PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00025ab333790 Zm00025ab333790_P002 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00025ab333790 Zm00025ab333790_P002 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00025ab333820 Zm00025ab333820_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00025ab333820 Zm00025ab333820_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab334120 Zm00025ab334120_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab334140 Zm00025ab334140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab334140 Zm00025ab334140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab334140 Zm00025ab334140_P001 conditional GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P003 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P004 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00025ab334230 Zm00025ab334230_P005 NA PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00025ab334330 Zm00025ab334330_P001 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00025ab334330 Zm00025ab334330_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab334500 Zm00025ab334500_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab334500 Zm00025ab334500_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab334500 Zm00025ab334500_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab334500 Zm00025ab334500_P001 NA SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P002 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P003 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00025ab334750 Zm00025ab334750_P003 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P001 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P004 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P005 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P006 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P006 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab334870 Zm00025ab334870_P007 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab334870 Zm00025ab334870_P007 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P001 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P002 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P003 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00025ab335010 Zm00025ab335010_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab335200 Zm00025ab335200_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab335200 Zm00025ab335200_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab335200 Zm00025ab335200_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab335200 Zm00025ab335200_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00025ab335420 Zm00025ab335420_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00025ab335420 Zm00025ab335420_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00025ab335420 Zm00025ab335420_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00025ab335420 Zm00025ab335420_P004 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab335510 Zm00025ab335510_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab335510 Zm00025ab335510_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab335510 Zm00025ab335510_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab335510 Zm00025ab335510_P001 NA PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab335720 Zm00025ab335720_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab335800 Zm00025ab335800_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab335800 Zm00025ab335800_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab335910 Zm00025ab335910_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab335910 Zm00025ab335910_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab335910 Zm00025ab335910_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab335910 Zm00025ab335910_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab335910 Zm00025ab335910_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab336080 Zm00025ab336080_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab336080 Zm00025ab336080_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab336090 Zm00025ab336090_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab336090 Zm00025ab336090_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab336110 Zm00025ab336110_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab336260 Zm00025ab336260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab336260 Zm00025ab336260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab336260 Zm00025ab336260_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab336540 Zm00025ab336540_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab336540 Zm00025ab336540_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab336910 Zm00025ab336910_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab336910 Zm00025ab336910_P002 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab337230 Zm00025ab337230_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab337360 Zm00025ab337360_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab337360 Zm00025ab337360_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab337360 Zm00025ab337360_P001 conditional PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab337370 Zm00025ab337370_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab337370 Zm00025ab337370_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab337370 Zm00025ab337370_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab337370 Zm00025ab337370_P004 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab337480 Zm00025ab337480_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab337480 Zm00025ab337480_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab337480 Zm00025ab337480_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab337480 Zm00025ab337480_P002 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab337560 Zm00025ab337560_P001 expected PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab337690 Zm00025ab337690_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab337690 Zm00025ab337690_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab337690 Zm00025ab337690_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00025ab337690 Zm00025ab337690_P002 NA PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab337820 Zm00025ab337820_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab337820 Zm00025ab337820_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab337820 Zm00025ab337820_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00025ab337820 Zm00025ab337820_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab337820 Zm00025ab337820_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab337820 Zm00025ab337820_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab337820 Zm00025ab337820_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab337820 Zm00025ab337820_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P005 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab338110 Zm00025ab338110_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab338190 Zm00025ab338190_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab338370 Zm00025ab338370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab338370 Zm00025ab338370_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab338370 Zm00025ab338370_P003 viridiplantae PWY-641 proanthocyanidins biosynthesis from flavanols RXN-10693 EC-1.3.1.77 Zm00025ab339170 Zm00025ab339170_P002 conditional PWY-6035 2,3-cis-flavanols biosynthesis RXN-9725 EC-1.3.1.77 Zm00025ab339170 Zm00025ab339170_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339230 Zm00025ab339230_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339230 Zm00025ab339230_P002 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab339310 Zm00025ab339310_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab339310 Zm00025ab339310_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00025ab339310 Zm00025ab339310_P003 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00025ab339480 Zm00025ab339480_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab339520 Zm00025ab339520_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab339520 Zm00025ab339520_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab339520 Zm00025ab339520_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab339710 Zm00025ab339710_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab339870 Zm00025ab339870_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00025ab339930 Zm00025ab339930_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab339950 Zm00025ab339950_P006 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab339990 Zm00025ab339990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab340000 Zm00025ab340000_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab340160 Zm00025ab340160_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab340160 Zm00025ab340160_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab340170 Zm00025ab340170_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340280 Zm00025ab340280_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340280 Zm00025ab340280_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab340290 Zm00025ab340290_P006 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00025ab340500 Zm00025ab340500_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00025ab340500 Zm00025ab340500_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab340570 Zm00025ab340570_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab340570 Zm00025ab340570_P002 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab340570 Zm00025ab340570_P003 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab340610 Zm00025ab340610_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab340670 Zm00025ab340670_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab340720 Zm00025ab340720_P001 NA PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab341000 Zm00025ab341000_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab341000 Zm00025ab341000_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab341000 Zm00025ab341000_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341300 Zm00025ab341300_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341300 Zm00025ab341300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341300 Zm00025ab341300_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341310 Zm00025ab341310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341310 Zm00025ab341310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341310 Zm00025ab341310_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341320 Zm00025ab341320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341320 Zm00025ab341320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341320 Zm00025ab341320_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341330 Zm00025ab341330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341330 Zm00025ab341330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341330 Zm00025ab341330_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341350 Zm00025ab341350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341350 Zm00025ab341350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341350 Zm00025ab341350_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab341360 Zm00025ab341360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341360 Zm00025ab341360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab341360 Zm00025ab341360_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341550 Zm00025ab341550_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341550 Zm00025ab341550_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341550 Zm00025ab341550_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341560 Zm00025ab341560_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341590 Zm00025ab341590_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341590 Zm00025ab341590_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341590 Zm00025ab341590_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341610 Zm00025ab341610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341610 Zm00025ab341610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341610 Zm00025ab341610_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341620 Zm00025ab341620_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341620 Zm00025ab341620_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341620 Zm00025ab341620_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab341790 Zm00025ab341790_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab341930 Zm00025ab341930_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab341980 Zm00025ab341980_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab341980 Zm00025ab341980_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab341980 Zm00025ab341980_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab342080 Zm00025ab342080_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab342080 Zm00025ab342080_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab342080 Zm00025ab342080_P003 viridiplantae PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P001 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P001 NA PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P002 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00025ab342140 Zm00025ab342140_P002 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab342170 Zm00025ab342170_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab342190 Zm00025ab342190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab342190 Zm00025ab342190_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00025ab342290 Zm00025ab342290_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00025ab342290 Zm00025ab342290_P002 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab342310 Zm00025ab342310_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab342310 Zm00025ab342310_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab342310 Zm00025ab342310_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab342310 Zm00025ab342310_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab342310 Zm00025ab342310_P001 excluded PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab342380 Zm00025ab342380_P001 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00025ab342460 Zm00025ab342460_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00025ab342460 Zm00025ab342460_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab342490 Zm00025ab342490_P005 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab342520 Zm00025ab342520_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab342520 Zm00025ab342520_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab342580 Zm00025ab342580_P005 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab342610 Zm00025ab342610_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab342610 Zm00025ab342610_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab342610 Zm00025ab342610_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab342610 Zm00025ab342610_P004 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab342610 Zm00025ab342610_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab342700 Zm00025ab342700_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab342850 Zm00025ab342850_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab342920 Zm00025ab342920_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab342920 Zm00025ab342920_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342930 Zm00025ab342930_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342930 Zm00025ab342930_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342930 Zm00025ab342930_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342940 Zm00025ab342940_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342950 Zm00025ab342950_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab342970 Zm00025ab342970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342970 Zm00025ab342970_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab342970 Zm00025ab342970_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00025ab343030 Zm00025ab343030_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab343180 Zm00025ab343180_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab343180 Zm00025ab343180_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab343220 Zm00025ab343220_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab343220 Zm00025ab343220_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab343220 Zm00025ab343220_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab343220 Zm00025ab343220_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab343220 Zm00025ab343220_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab343250 Zm00025ab343250_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00025ab343470 Zm00025ab343470_P001 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P001 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00025ab343530 Zm00025ab343530_P002 excluded PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P003 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P004 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P004 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab343600 Zm00025ab343600_P004 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab343630 Zm00025ab343630_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab343630 Zm00025ab343630_P001 ubiquitous PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab343760 Zm00025ab343760_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00025ab343760 Zm00025ab343760_P002 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab343790 Zm00025ab343790_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab343790 Zm00025ab343790_P001 expected PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab343980 Zm00025ab343980_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00025ab343980 Zm00025ab343980_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab343990 Zm00025ab343990_P002 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00025ab344270 Zm00025ab344270_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00025ab344270 Zm00025ab344270_P002 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00025ab344280 Zm00025ab344280_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00025ab344280 Zm00025ab344280_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab344310 Zm00025ab344310_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab344550 Zm00025ab344550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab344550 Zm00025ab344550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab344550 Zm00025ab344550_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab344580 Zm00025ab344580_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab344580 Zm00025ab344580_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab344580 Zm00025ab344580_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab344580 Zm00025ab344580_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab344580 Zm00025ab344580_P001 ubiquitous PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00025ab344680 Zm00025ab344680_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab344800 Zm00025ab344800_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab344850 Zm00025ab344850_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00025ab344850 Zm00025ab344850_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTCYCLOHYD-RXN EC-3.5.4.19 Zm00025ab345170 Zm00025ab345170_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTPRATPHYD-RXN EC-3.6.1.31 Zm00025ab345170 Zm00025ab345170_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P003 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P005 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P005 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P005 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P006 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P006 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab345230 Zm00025ab345230_P006 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab345290 Zm00025ab345290_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab345290 Zm00025ab345290_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab345290 Zm00025ab345290_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab345290 Zm00025ab345290_P004 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab345370 Zm00025ab345370_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab345370 Zm00025ab345370_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab345370 Zm00025ab345370_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab345370 Zm00025ab345370_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab345470 Zm00025ab345470_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345480 Zm00025ab345480_P002 conditional LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab345510 Zm00025ab345510_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00025ab345510 Zm00025ab345510_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab345630 Zm00025ab345630_P001 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab345700 Zm00025ab345700_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00025ab345700 Zm00025ab345700_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab345700 Zm00025ab345700_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00025ab345700 Zm00025ab345700_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00025ab345700 Zm00025ab345700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab345750 Zm00025ab345750_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab345760 Zm00025ab345760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345760 Zm00025ab345760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345760 Zm00025ab345760_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab345770 Zm00025ab345770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345770 Zm00025ab345770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab345770 Zm00025ab345770_P001 conditional PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00025ab345820 Zm00025ab345820_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00025ab345840 Zm00025ab345840_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00025ab345840 Zm00025ab345840_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00025ab345840 Zm00025ab345840_P002 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P002 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00025ab345840 Zm00025ab345840_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00025ab345840 Zm00025ab345840_P003 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P003 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00025ab345840 Zm00025ab345840_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00025ab345840 Zm00025ab345840_P004 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P004 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P004 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00025ab345840 Zm00025ab345840_P004 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00025ab345840 Zm00025ab345840_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab345870 Zm00025ab345870_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00025ab345890 Zm00025ab345890_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab345910 Zm00025ab345910_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab345910 Zm00025ab345910_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab345910 Zm00025ab345910_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab345910 Zm00025ab345910_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00025ab345910 Zm00025ab345910_P005 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab346040 Zm00025ab346040_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab346080 Zm00025ab346080_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab346290 Zm00025ab346290_P006 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab346390 Zm00025ab346390_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab346410 Zm00025ab346410_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab346410 Zm00025ab346410_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab346410 Zm00025ab346410_P003 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab346440 Zm00025ab346440_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab346440 Zm00025ab346440_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab346710 Zm00025ab346710_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab346730 Zm00025ab346730_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab346730 Zm00025ab346730_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab346730 Zm00025ab346730_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab346820 Zm00025ab346820_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab346950 Zm00025ab346950_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab346950 Zm00025ab346950_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab346950 Zm00025ab346950_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab346950 Zm00025ab346950_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab346950 Zm00025ab346950_P005 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P005 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00025ab346960 Zm00025ab346960_P005 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab347070 Zm00025ab347070_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab347070 Zm00025ab347070_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab347070 Zm00025ab347070_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab347070 Zm00025ab347070_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab347070 Zm00025ab347070_P005 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab347310 Zm00025ab347310_P001 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab347360 Zm00025ab347360_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab347450 Zm00025ab347450_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab347460 Zm00025ab347460_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab347460 Zm00025ab347460_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab347460 Zm00025ab347460_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab347460 Zm00025ab347460_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab347650 Zm00025ab347650_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab347650 Zm00025ab347650_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P002 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P003 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P003 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P003 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00025ab347810 Zm00025ab347810_P003 expected PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab347960 Zm00025ab347960_P001 viridiplantae PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00025ab348160 Zm00025ab348160_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00025ab348160 Zm00025ab348160_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab348260 Zm00025ab348260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab348260 Zm00025ab348260_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab348380 Zm00025ab348380_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab348380 Zm00025ab348380_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab348380 Zm00025ab348380_P003 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab348490 Zm00025ab348490_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab348670 Zm00025ab348670_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00025ab348700 Zm00025ab348700_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00025ab348700 Zm00025ab348700_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00025ab348700 Zm00025ab348700_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00025ab348710 Zm00025ab348710_P003 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab348740 Zm00025ab348740_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab348740 Zm00025ab348740_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab348740 Zm00025ab348740_P003 viridiplantae PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab348750 Zm00025ab348750_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab348750 Zm00025ab348750_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P002 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P002 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P002 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab348750 Zm00025ab348750_P003 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P003 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P003 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P003 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P003 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P003 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab348750 Zm00025ab348750_P004 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P004 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P004 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00025ab348750 Zm00025ab348750_P004 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P004 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00025ab348750 Zm00025ab348750_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab348800 Zm00025ab348800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab348800 Zm00025ab348800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab348800 Zm00025ab348800_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab348810 Zm00025ab348810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab348810 Zm00025ab348810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab348810 Zm00025ab348810_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab348850 Zm00025ab348850_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab348850 Zm00025ab348850_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab348860 Zm00025ab348860_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab348860 Zm00025ab348860_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab348970 Zm00025ab348970_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab348970 Zm00025ab348970_P001 expected PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00025ab349150 Zm00025ab349150_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349160 Zm00025ab349160_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349160 Zm00025ab349160_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349160 Zm00025ab349160_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349170 Zm00025ab349170_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349170 Zm00025ab349170_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab349170 Zm00025ab349170_P001 NA PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab349240 Zm00025ab349240_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P002 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349390 Zm00025ab349390_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab349500 Zm00025ab349500_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab349580 Zm00025ab349580_P001 viridiplantae PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00025ab349600 Zm00025ab349600_P001 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab349660 Zm00025ab349660_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab349660 Zm00025ab349660_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab349660 Zm00025ab349660_P003 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P004 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P004 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P004 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P004 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00025ab349660 Zm00025ab349660_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00025ab349660 Zm00025ab349660_P004 ubiquitous PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab349700 Zm00025ab349700_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab349700 Zm00025ab349700_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab349700 Zm00025ab349700_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab349700 Zm00025ab349700_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab349830 Zm00025ab349830_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab349830 Zm00025ab349830_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab350230 Zm00025ab350230_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab350230 Zm00025ab350230_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab350230 Zm00025ab350230_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00025ab350320 Zm00025ab350320_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab350320 Zm00025ab350320_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00025ab350320 Zm00025ab350320_P001 ubiquitous PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab350430 Zm00025ab350430_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab350540 Zm00025ab350540_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab350540 Zm00025ab350540_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab350540 Zm00025ab350540_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab350540 Zm00025ab350540_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab350540 Zm00025ab350540_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab350680 Zm00025ab350680_P001 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab350810 Zm00025ab350810_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab350810 Zm00025ab350810_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab350810 Zm00025ab350810_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab350810 Zm00025ab350810_P004 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab350890 Zm00025ab350890_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab350890 Zm00025ab350890_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab350890 Zm00025ab350890_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab350920 Zm00025ab350920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab350920 Zm00025ab350920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab350920 Zm00025ab350920_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab350980 Zm00025ab350980_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00025ab350980 Zm00025ab350980_P002 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab351050 Zm00025ab351050_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab351230 Zm00025ab351230_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab351230 Zm00025ab351230_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab351230 Zm00025ab351230_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab351250 Zm00025ab351250_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab351250 Zm00025ab351250_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab351250 Zm00025ab351250_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab351260 Zm00025ab351260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab351260 Zm00025ab351260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab351260 Zm00025ab351260_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab351270 Zm00025ab351270_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab351320 Zm00025ab351320_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab351320 Zm00025ab351320_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab351320 Zm00025ab351320_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab351320 Zm00025ab351320_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab351350 Zm00025ab351350_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab351350 Zm00025ab351350_P002 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab351520 Zm00025ab351520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab351520 Zm00025ab351520_P001 conditional PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00025ab351680 Zm00025ab351680_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00025ab351680 Zm00025ab351680_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXN-19838 EC-4.99.1.6 Zm00025ab351830 Zm00025ab351830_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P002 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00025ab351900 Zm00025ab351900_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab351920 Zm00025ab351920_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab351920 Zm00025ab351920_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab351920 Zm00025ab351920_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab351980 Zm00025ab351980_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab351980 Zm00025ab351980_P003 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab352120 Zm00025ab352120_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab352120 Zm00025ab352120_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab352150 Zm00025ab352150_P001 viridiplantae PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00025ab352170 Zm00025ab352170_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab352400 Zm00025ab352400_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab352400 Zm00025ab352400_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab352450 Zm00025ab352450_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab352500 Zm00025ab352500_P007 ubiquitous PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab352710 Zm00025ab352710_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00025ab352710 Zm00025ab352710_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab352890 Zm00025ab352890_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab352890 Zm00025ab352890_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab352890 Zm00025ab352890_P003 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab352890 Zm00025ab352890_P004 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab352970 Zm00025ab352970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab352970 Zm00025ab352970_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab352970 Zm00025ab352970_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab353010 Zm00025ab353010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab353010 Zm00025ab353010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab353010 Zm00025ab353010_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P004 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P005 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P005 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P005 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P005 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab353080 Zm00025ab353080_P005 ubiquitous PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab353100 Zm00025ab353100_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab353100 Zm00025ab353100_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab353210 Zm00025ab353210_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab353210 Zm00025ab353210_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353210 Zm00025ab353210_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab353280 Zm00025ab353280_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00025ab353320 Zm00025ab353320_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00025ab353320 Zm00025ab353320_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab353460 Zm00025ab353460_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab353590 Zm00025ab353590_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab353850 Zm00025ab353850_P001 expected COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P004 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00025ab353970 Zm00025ab353970_P004 NA PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00025ab353990 Zm00025ab353990_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00025ab353990 Zm00025ab353990_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab354110 Zm00025ab354110_P002 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab354210 Zm00025ab354210_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab354690 Zm00025ab354690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab354690 Zm00025ab354690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab354690 Zm00025ab354690_P001 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab354730 Zm00025ab354730_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab354750 Zm00025ab354750_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab354860 Zm00025ab354860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab354860 Zm00025ab354860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab354860 Zm00025ab354860_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab355110 Zm00025ab355110_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00025ab355110 Zm00025ab355110_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P006 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P006 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab355190 Zm00025ab355190_P006 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab355260 Zm00025ab355260_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab355260 Zm00025ab355260_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P003 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab355260 Zm00025ab355260_P003 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab355260 Zm00025ab355260_P003 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00025ab355460 Zm00025ab355460_P001 viridiplantae PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00025ab355530 Zm00025ab355530_P001 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab355540 Zm00025ab355540_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab355810 Zm00025ab355810_P004 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab356150 Zm00025ab356150_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab356150 Zm00025ab356150_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab356150 Zm00025ab356150_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab356150 Zm00025ab356150_P004 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P003 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P004 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00025ab356270 Zm00025ab356270_P004 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab356410 Zm00025ab356410_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab356410 Zm00025ab356410_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab356410 Zm00025ab356410_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab356720 Zm00025ab356720_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab356720 Zm00025ab356720_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab356720 Zm00025ab356720_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab356810 Zm00025ab356810_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab356820 Zm00025ab356820_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab356960 Zm00025ab356960_P005 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00025ab356990 Zm00025ab356990_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab357020 Zm00025ab357020_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab357020 Zm00025ab357020_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00025ab357030 Zm00025ab357030_P002 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab357160 Zm00025ab357160_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab357160 Zm00025ab357160_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab357160 Zm00025ab357160_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab357160 Zm00025ab357160_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357260 Zm00025ab357260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357740 Zm00025ab357740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357740 Zm00025ab357740_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357740 Zm00025ab357740_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357740 Zm00025ab357740_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357740 Zm00025ab357740_P005 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab357890 Zm00025ab357890_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab357890 Zm00025ab357890_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab357890 Zm00025ab357890_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab357890 Zm00025ab357890_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab357900 Zm00025ab357900_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab358230 Zm00025ab358230_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab358230 Zm00025ab358230_P002 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab358240 Zm00025ab358240_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P004 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P004 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P004 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P005 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P005 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P005 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00025ab358290 Zm00025ab358290_P005 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab358420 Zm00025ab358420_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab358420 Zm00025ab358420_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab358550 Zm00025ab358550_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab358550 Zm00025ab358550_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab358550 Zm00025ab358550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab358550 Zm00025ab358550_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab358550 Zm00025ab358550_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab358720 Zm00025ab358720_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab358840 Zm00025ab358840_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab358960 Zm00025ab358960_P003 ubiquitous PWY-6019 pseudouridine degradation PSEUDOURIDINE-KINASE-RXN EC-2.7.1.83 Zm00025ab359330 Zm00025ab359330_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab359360 Zm00025ab359360_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab359520 Zm00025ab359520_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab359520 Zm00025ab359520_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab359590 Zm00025ab359590_P001 expected PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00025ab359850 Zm00025ab359850_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab360010 Zm00025ab360010_P003 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab360250 Zm00025ab360250_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab360480 Zm00025ab360480_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P003 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P003 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P003 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P003 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P003 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P004 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P004 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P004 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P004 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P004 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P005 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P005 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P005 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P005 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P005 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P006 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P006 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P006 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P006 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P006 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P006 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P007 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab360630 Zm00025ab360630_P007 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P007 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab360630 Zm00025ab360630_P007 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P007 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab360630 Zm00025ab360630_P007 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab360700 Zm00025ab360700_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab360700 Zm00025ab360700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab360700 Zm00025ab360700_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00025ab360710 Zm00025ab360710_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab360800 Zm00025ab360800_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab360800 Zm00025ab360800_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab360800 Zm00025ab360800_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab360800 Zm00025ab360800_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab360930 Zm00025ab360930_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab360930 Zm00025ab360930_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab360930 Zm00025ab360930_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab360930 Zm00025ab360930_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab360960 Zm00025ab360960_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab360960 Zm00025ab360960_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab360960 Zm00025ab360960_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab360960 Zm00025ab360960_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab360970 Zm00025ab360970_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab360970 Zm00025ab360970_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab360970 Zm00025ab360970_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab360970 Zm00025ab360970_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab360980 Zm00025ab360980_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab360980 Zm00025ab360980_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab360980 Zm00025ab360980_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab360980 Zm00025ab360980_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab360990 Zm00025ab360990_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab360990 Zm00025ab360990_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab360990 Zm00025ab360990_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab360990 Zm00025ab360990_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab361030 Zm00025ab361030_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab361030 Zm00025ab361030_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab361030 Zm00025ab361030_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab361030 Zm00025ab361030_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab361040 Zm00025ab361040_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab361040 Zm00025ab361040_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab361040 Zm00025ab361040_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab361040 Zm00025ab361040_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab361050 Zm00025ab361050_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab361050 Zm00025ab361050_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab361050 Zm00025ab361050_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab361050 Zm00025ab361050_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab361220 Zm00025ab361220_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab361220 Zm00025ab361220_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab361220 Zm00025ab361220_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab361220 Zm00025ab361220_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab361230 Zm00025ab361230_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab361230 Zm00025ab361230_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab361230 Zm00025ab361230_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab361230 Zm00025ab361230_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab361360 Zm00025ab361360_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00025ab361570 Zm00025ab361570_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab361710 Zm00025ab361710_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00025ab361780 Zm00025ab361780_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00025ab361830 Zm00025ab361830_P002 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab361890 Zm00025ab361890_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab361890 Zm00025ab361890_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00025ab361930 Zm00025ab361930_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00025ab361930 Zm00025ab361930_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00025ab361930 Zm00025ab361930_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00025ab361930 Zm00025ab361930_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab362180 Zm00025ab362180_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab362180 Zm00025ab362180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab362180 Zm00025ab362180_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00025ab362630 Zm00025ab362630_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab362680 Zm00025ab362680_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab362740 Zm00025ab362740_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab362740 Zm00025ab362740_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab362740 Zm00025ab362740_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab363020 Zm00025ab363020_P002 conditional PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00025ab363040 Zm00025ab363040_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab363040 Zm00025ab363040_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00025ab363040 Zm00025ab363040_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab363040 Zm00025ab363040_P002 ubiquitous PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00025ab363040 Zm00025ab363040_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab363040 Zm00025ab363040_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00025ab363120 Zm00025ab363120_P003 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab363390 Zm00025ab363390_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab363400 Zm00025ab363400_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab363410 Zm00025ab363410_P002 manual LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00025ab363430 Zm00025ab363430_P001 ubiquitous PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab363480 Zm00025ab363480_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab363480 Zm00025ab363480_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab363490 Zm00025ab363490_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab363500 Zm00025ab363500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab363510 Zm00025ab363510_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab363510 Zm00025ab363510_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab363510 Zm00025ab363510_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab363520 Zm00025ab363520_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab363520 Zm00025ab363520_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00025ab363520 Zm00025ab363520_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00025ab363520 Zm00025ab363520_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab363740 Zm00025ab363740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab363740 Zm00025ab363740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab363740 Zm00025ab363740_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab363840 Zm00025ab363840_P001 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab364060 Zm00025ab364060_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab364140 Zm00025ab364140_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab364140 Zm00025ab364140_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab364140 Zm00025ab364140_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab364140 Zm00025ab364140_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab364150 Zm00025ab364150_P003 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab364170 Zm00025ab364170_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab364170 Zm00025ab364170_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab364170 Zm00025ab364170_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab364290 Zm00025ab364290_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab364290 Zm00025ab364290_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab364320 Zm00025ab364320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab364320 Zm00025ab364320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab364320 Zm00025ab364320_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab364330 Zm00025ab364330_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab364830 Zm00025ab364830_P004 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab364850 Zm00025ab364850_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab364850 Zm00025ab364850_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab364850 Zm00025ab364850_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab364850 Zm00025ab364850_P001 NA SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab364880 Zm00025ab364880_P005 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00025ab364990 Zm00025ab364990_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab365230 Zm00025ab365230_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab365230 Zm00025ab365230_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab365230 Zm00025ab365230_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab365350 Zm00025ab365350_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab365850 Zm00025ab365850_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab365850 Zm00025ab365850_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab365850 Zm00025ab365850_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab365850 Zm00025ab365850_P004 NA PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab366040 Zm00025ab366040_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00025ab366060 Zm00025ab366060_P001 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab366150 Zm00025ab366150_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab366150 Zm00025ab366150_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab366150 Zm00025ab366150_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab366150 Zm00025ab366150_P001 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00025ab366160 Zm00025ab366160_P001 ubiquitous PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab366230 Zm00025ab366230_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab366230 Zm00025ab366230_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab366230 Zm00025ab366230_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00025ab366230 Zm00025ab366230_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00025ab366230 Zm00025ab366230_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00025ab366230 Zm00025ab366230_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab366230 Zm00025ab366230_P002 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab366230 Zm00025ab366230_P002 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab366230 Zm00025ab366230_P002 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00025ab366230 Zm00025ab366230_P002 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00025ab366230 Zm00025ab366230_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00025ab366230 Zm00025ab366230_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab366240 Zm00025ab366240_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab366420 Zm00025ab366420_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00025ab366740 Zm00025ab366740_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00025ab366740 Zm00025ab366740_P001 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00025ab366740 Zm00025ab366740_P002 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00025ab366740 Zm00025ab366740_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab366840 Zm00025ab366840_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab366840 Zm00025ab366840_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab366970 Zm00025ab366970_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab366970 Zm00025ab366970_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab366970 Zm00025ab366970_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab366970 Zm00025ab366970_P004 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab366970 Zm00025ab366970_P005 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab367170 Zm00025ab367170_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab367230 Zm00025ab367230_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab367230 Zm00025ab367230_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab367410 Zm00025ab367410_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab367410 Zm00025ab367410_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00025ab367410 Zm00025ab367410_P003 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab367440 Zm00025ab367440_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab367440 Zm00025ab367440_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab367440 Zm00025ab367440_P003 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab367440 Zm00025ab367440_P004 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab367440 Zm00025ab367440_P005 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00025ab367520 Zm00025ab367520_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab367680 Zm00025ab367680_P001 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00025ab367900 Zm00025ab367900_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00025ab367900 Zm00025ab367900_P002 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab367940 Zm00025ab367940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab367940 Zm00025ab367940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab367940 Zm00025ab367940_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab368140 Zm00025ab368140_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab368140 Zm00025ab368140_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab368140 Zm00025ab368140_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab368140 Zm00025ab368140_P001 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab368180 Zm00025ab368180_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab368180 Zm00025ab368180_P002 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab368210 Zm00025ab368210_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab368280 Zm00025ab368280_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab368350 Zm00025ab368350_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab368360 Zm00025ab368360_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab368360 Zm00025ab368360_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab368360 Zm00025ab368360_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab368360 Zm00025ab368360_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab368360 Zm00025ab368360_P001 ubiquitous PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab368400 Zm00025ab368400_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab368410 Zm00025ab368410_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab368420 Zm00025ab368420_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab368420 Zm00025ab368420_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab368420 Zm00025ab368420_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab368430 Zm00025ab368430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab368430 Zm00025ab368430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab368430 Zm00025ab368430_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00025ab368630 Zm00025ab368630_P002 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00025ab368800 Zm00025ab368800_P001 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab368880 Zm00025ab368880_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab368880 Zm00025ab368880_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab368880 Zm00025ab368880_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab368880 Zm00025ab368880_P001 manual PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab368900 Zm00025ab368900_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab368900 Zm00025ab368900_P002 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab369270 Zm00025ab369270_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab369270 Zm00025ab369270_P002 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab369280 Zm00025ab369280_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab369280 Zm00025ab369280_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab369280 Zm00025ab369280_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab369280 Zm00025ab369280_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab369430 Zm00025ab369430_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab369430 Zm00025ab369430_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab369430 Zm00025ab369430_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab369460 Zm00025ab369460_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab369460 Zm00025ab369460_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab369470 Zm00025ab369470_P001 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab369800 Zm00025ab369800_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P001 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P001 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P001 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P002 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P002 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P002 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P003 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P003 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P003 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P004 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P004 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P004 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P005 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P005 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00025ab369810 Zm00025ab369810_P005 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab369890 Zm00025ab369890_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab370280 Zm00025ab370280_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab370280 Zm00025ab370280_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab370280 Zm00025ab370280_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab370610 Zm00025ab370610_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab370610 Zm00025ab370610_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00025ab370630 Zm00025ab370630_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab370630 Zm00025ab370630_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00025ab370630 Zm00025ab370630_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00025ab370630 Zm00025ab370630_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab370780 Zm00025ab370780_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab370780 Zm00025ab370780_P002 ubiquitous PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00025ab370790 Zm00025ab370790_P001 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00025ab370790 Zm00025ab370790_P001 conditional PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00025ab370790 Zm00025ab370790_P002 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00025ab370790 Zm00025ab370790_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00025ab370920 Zm00025ab370920_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab371090 Zm00025ab371090_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab371100 Zm00025ab371100_P001 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab371450 Zm00025ab371450_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab371450 Zm00025ab371450_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab371450 Zm00025ab371450_P001 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab371500 Zm00025ab371500_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab371500 Zm00025ab371500_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab371590 Zm00025ab371590_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab371590 Zm00025ab371590_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab371660 Zm00025ab371660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab371830 Zm00025ab371830_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00025ab371860 Zm00025ab371860_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00025ab371860 Zm00025ab371860_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab371860 Zm00025ab371860_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab371860 Zm00025ab371860_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00025ab371860 Zm00025ab371860_P001 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab371870 Zm00025ab371870_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab371870 Zm00025ab371870_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab372050 Zm00025ab372050_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab372050 Zm00025ab372050_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab372050 Zm00025ab372050_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab372050 Zm00025ab372050_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab372090 Zm00025ab372090_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab372090 Zm00025ab372090_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab372090 Zm00025ab372090_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab372090 Zm00025ab372090_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372250 Zm00025ab372250_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372260 Zm00025ab372260_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372260 Zm00025ab372260_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372280 Zm00025ab372280_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372280 Zm00025ab372280_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372290 Zm00025ab372290_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372290 Zm00025ab372290_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372290 Zm00025ab372290_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372290 Zm00025ab372290_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372300 Zm00025ab372300_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372300 Zm00025ab372300_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P006 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372320 Zm00025ab372320_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372330 Zm00025ab372330_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00025ab372330 Zm00025ab372330_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab372350 Zm00025ab372350_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab372390 Zm00025ab372390_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab372760 Zm00025ab372760_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab372760 Zm00025ab372760_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab372760 Zm00025ab372760_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab372760 Zm00025ab372760_P001 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab372830 Zm00025ab372830_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab372830 Zm00025ab372830_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab372910 Zm00025ab372910_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab372910 Zm00025ab372910_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab372910 Zm00025ab372910_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab372910 Zm00025ab372910_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00025ab373150 Zm00025ab373150_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab373160 Zm00025ab373160_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab373170 Zm00025ab373170_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab373170 Zm00025ab373170_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P005 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P006 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P006 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P006 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P006 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P007 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P007 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P007 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P007 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P008 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P008 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P008 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00025ab373210 Zm00025ab373210_P008 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab373220 Zm00025ab373220_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00025ab373220 Zm00025ab373220_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab373240 Zm00025ab373240_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab373240 Zm00025ab373240_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab373240 Zm00025ab373240_P003 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab373390 Zm00025ab373390_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab373540 Zm00025ab373540_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab373780 Zm00025ab373780_P002 expected GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P004 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P005 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab374280 Zm00025ab374280_P005 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00025ab374370 Zm00025ab374370_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00025ab374370 Zm00025ab374370_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab374600 Zm00025ab374600_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab374600 Zm00025ab374600_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab374600 Zm00025ab374600_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00025ab374600 Zm00025ab374600_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab374640 Zm00025ab374640_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab374640 Zm00025ab374640_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab374640 Zm00025ab374640_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab374640 Zm00025ab374640_P001 ubiquitous PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab374950 Zm00025ab374950_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab374950 Zm00025ab374950_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00025ab374950 Zm00025ab374950_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00025ab374950 Zm00025ab374950_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab375060 Zm00025ab375060_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00025ab375060 Zm00025ab375060_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00025ab375180 Zm00025ab375180_P004 expected PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00025ab375270 Zm00025ab375270_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00025ab375270 Zm00025ab375270_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00025ab375270 Zm00025ab375270_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab375500 Zm00025ab375500_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab375500 Zm00025ab375500_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab375510 Zm00025ab375510_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00025ab375510 Zm00025ab375510_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00025ab375560 Zm00025ab375560_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00025ab375560 Zm00025ab375560_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00025ab375560 Zm00025ab375560_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00025ab375560 Zm00025ab375560_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab375770 Zm00025ab375770_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab375830 Zm00025ab375830_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab375830 Zm00025ab375830_P001 ubiquitous PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab375900 Zm00025ab375900_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab376000 Zm00025ab376000_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab376000 Zm00025ab376000_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab376100 Zm00025ab376100_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab376190 Zm00025ab376190_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab376190 Zm00025ab376190_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab376190 Zm00025ab376190_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab376190 Zm00025ab376190_P004 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab376200 Zm00025ab376200_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab376200 Zm00025ab376200_P001 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00025ab376200 Zm00025ab376200_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00025ab376200 Zm00025ab376200_P002 NA PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERDECARB-RXN EC-4.1.1.65 Zm00025ab376390 Zm00025ab376390_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab376460 Zm00025ab376460_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00025ab376490 Zm00025ab376490_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00025ab376740 Zm00025ab376740_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00025ab376740 Zm00025ab376740_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab377010 Zm00025ab377010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab377010 Zm00025ab377010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab377010 Zm00025ab377010_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00025ab377020 Zm00025ab377020_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00025ab377020 Zm00025ab377020_P002 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00025ab377020 Zm00025ab377020_P003 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00025ab377130 Zm00025ab377130_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00025ab377130 Zm00025ab377130_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab377170 Zm00025ab377170_P002 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab377200 Zm00025ab377200_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab377200 Zm00025ab377200_P002 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00025ab377200 Zm00025ab377200_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab377280 Zm00025ab377280_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab377510 Zm00025ab377510_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab377510 Zm00025ab377510_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab377510 Zm00025ab377510_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab377510 Zm00025ab377510_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab377600 Zm00025ab377600_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab377600 Zm00025ab377600_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab377730 Zm00025ab377730_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab377730 Zm00025ab377730_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab377730 Zm00025ab377730_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab377730 Zm00025ab377730_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab377730 Zm00025ab377730_P005 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab377750 Zm00025ab377750_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab377750 Zm00025ab377750_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab377770 Zm00025ab377770_P001 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab377780 Zm00025ab377780_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00025ab377780 Zm00025ab377780_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab377900 Zm00025ab377900_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab377900 Zm00025ab377900_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab378380 Zm00025ab378380_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab378430 Zm00025ab378430_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab378430 Zm00025ab378430_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab378430 Zm00025ab378430_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab378430 Zm00025ab378430_P002 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab378710 Zm00025ab378710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab378740 Zm00025ab378740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab378750 Zm00025ab378750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab378780 Zm00025ab378780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab378790 Zm00025ab378790_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab378950 Zm00025ab378950_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab378950 Zm00025ab378950_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab379070 Zm00025ab379070_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00025ab379080 Zm00025ab379080_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00025ab379080 Zm00025ab379080_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00025ab379080 Zm00025ab379080_P003 viridiplantae PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab379130 Zm00025ab379130_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab379290 Zm00025ab379290_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab379340 Zm00025ab379340_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab379400 Zm00025ab379400_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab379400 Zm00025ab379400_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab379470 Zm00025ab379470_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab379470 Zm00025ab379470_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab379600 Zm00025ab379600_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab379600 Zm00025ab379600_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab379600 Zm00025ab379600_P001 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab379640 Zm00025ab379640_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab379640 Zm00025ab379640_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00025ab379640 Zm00025ab379640_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00025ab379780 Zm00025ab379780_P003 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab379880 Zm00025ab379880_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00025ab379880 Zm00025ab379880_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab379980 Zm00025ab379980_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab379980 Zm00025ab379980_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab380010 Zm00025ab380010_P001 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab380270 Zm00025ab380270_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab380270 Zm00025ab380270_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab380270 Zm00025ab380270_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab380270 Zm00025ab380270_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab380270 Zm00025ab380270_P001 excluded PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab380340 Zm00025ab380340_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab380490 Zm00025ab380490_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab380490 Zm00025ab380490_P002 conditional PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab380820 Zm00025ab380820_P001 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab380820 Zm00025ab380820_P002 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00025ab380820 Zm00025ab380820_P003 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00025ab380900 Zm00025ab380900_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab381430 Zm00025ab381430_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab381430 Zm00025ab381430_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab381480 Zm00025ab381480_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab381480 Zm00025ab381480_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab381480 Zm00025ab381480_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab381480 Zm00025ab381480_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00025ab381480 Zm00025ab381480_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00025ab381480 Zm00025ab381480_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00025ab381480 Zm00025ab381480_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab381480 Zm00025ab381480_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00025ab381480 Zm00025ab381480_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00025ab381480 Zm00025ab381480_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00025ab381480 Zm00025ab381480_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00025ab381480 Zm00025ab381480_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab381560 Zm00025ab381560_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab381610 Zm00025ab381610_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab381610 Zm00025ab381610_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab381610 Zm00025ab381610_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00025ab381610 Zm00025ab381610_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00025ab381690 Zm00025ab381690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab381700 Zm00025ab381700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab381700 Zm00025ab381700_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab381950 Zm00025ab381950_P001 viridiplantae PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00025ab382210 Zm00025ab382210_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab382380 Zm00025ab382380_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab382380 Zm00025ab382380_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab382810 Zm00025ab382810_P004 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab382930 Zm00025ab382930_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00025ab383270 Zm00025ab383270_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab383310 Zm00025ab383310_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab383310 Zm00025ab383310_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab383440 Zm00025ab383440_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab383440 Zm00025ab383440_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00025ab383440 Zm00025ab383440_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00025ab383440 Zm00025ab383440_P002 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab383660 Zm00025ab383660_P001 expected PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00025ab383740 Zm00025ab383740_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab384030 Zm00025ab384030_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00025ab384030 Zm00025ab384030_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab384130 Zm00025ab384130_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab384130 Zm00025ab384130_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab384180 Zm00025ab384180_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P003 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P003 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P004 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P004 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P005 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P005 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00025ab384220 Zm00025ab384220_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab384230 Zm00025ab384230_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab384260 Zm00025ab384260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab384260 Zm00025ab384260_P002 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P003 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00025ab384470 Zm00025ab384470_P004 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P004 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P004 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P005 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P005 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P006 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P006 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab384480 Zm00025ab384480_P006 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab384510 Zm00025ab384510_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab384510 Zm00025ab384510_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab384510 Zm00025ab384510_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab384510 Zm00025ab384510_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00025ab384510 Zm00025ab384510_P005 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab384590 Zm00025ab384590_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab384830 Zm00025ab384830_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab384880 Zm00025ab384880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab384880 Zm00025ab384880_P002 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P003 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P004 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P005 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P006 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00025ab385010 Zm00025ab385010_P006 manual PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab385270 Zm00025ab385270_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00025ab385270 Zm00025ab385270_P001 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab385370 Zm00025ab385370_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab385400 Zm00025ab385400_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab385400 Zm00025ab385400_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab385400 Zm00025ab385400_P003 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab385500 Zm00025ab385500_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab385550 Zm00025ab385550_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab385550 Zm00025ab385550_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00025ab385550 Zm00025ab385550_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab385570 Zm00025ab385570_P001 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab385600 Zm00025ab385600_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P004 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P004 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab386030 Zm00025ab386030_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab386150 Zm00025ab386150_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab386170 Zm00025ab386170_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00025ab386190 Zm00025ab386190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab386290 Zm00025ab386290_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab386290 Zm00025ab386290_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab386290 Zm00025ab386290_P003 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00025ab386320 Zm00025ab386320_P001 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab386450 Zm00025ab386450_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab386780 Zm00025ab386780_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab386790 Zm00025ab386790_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab386820 Zm00025ab386820_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00025ab386820 Zm00025ab386820_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00025ab386840 Zm00025ab386840_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab386880 Zm00025ab386880_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab386880 Zm00025ab386880_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab386880 Zm00025ab386880_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00025ab386880 Zm00025ab386880_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab386890 Zm00025ab386890_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab387050 Zm00025ab387050_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab387050 Zm00025ab387050_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00025ab387050 Zm00025ab387050_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00025ab387050 Zm00025ab387050_P002 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab387100 Zm00025ab387100_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab387100 Zm00025ab387100_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab387410 Zm00025ab387410_P001 ubiquitous PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab387460 Zm00025ab387460_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab387460 Zm00025ab387460_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab387460 Zm00025ab387460_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab387460 Zm00025ab387460_P004 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00025ab387460 Zm00025ab387460_P005 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00025ab387600 Zm00025ab387600_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00025ab387600 Zm00025ab387600_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00025ab387600 Zm00025ab387600_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P005 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P005 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00025ab387650 Zm00025ab387650_P005 conditional COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab387840 Zm00025ab387840_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00025ab387840 Zm00025ab387840_P001 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab387920 Zm00025ab387920_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab387920 Zm00025ab387920_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab387920 Zm00025ab387920_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00025ab387920 Zm00025ab387920_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab387940 Zm00025ab387940_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab387940 Zm00025ab387940_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab387940 Zm00025ab387940_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P006 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P007 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P008 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P009 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab388020 Zm00025ab388020_P010 expected PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00025ab388030 Zm00025ab388030_P001 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00025ab388030 Zm00025ab388030_P002 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00025ab388030 Zm00025ab388030_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab388060 Zm00025ab388060_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab388190 Zm00025ab388190_P001 conditional PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P002 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P002 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P002 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00025ab388200 Zm00025ab388200_P002 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab388380 Zm00025ab388380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab388470 Zm00025ab388470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab388480 Zm00025ab388480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab388480 Zm00025ab388480_P002 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab388490 Zm00025ab388490_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab388490 Zm00025ab388490_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab388490 Zm00025ab388490_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab388490 Zm00025ab388490_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab388990 Zm00025ab388990_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab388990 Zm00025ab388990_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab388990 Zm00025ab388990_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab388990 Zm00025ab388990_P004 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab389090 Zm00025ab389090_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab389310 Zm00025ab389310_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab389320 Zm00025ab389320_P001 ubiquitous PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab389450 Zm00025ab389450_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab389450 Zm00025ab389450_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab389450 Zm00025ab389450_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab389450 Zm00025ab389450_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00025ab389450 Zm00025ab389450_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00025ab389450 Zm00025ab389450_P003 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab389480 Zm00025ab389480_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00025ab389480 Zm00025ab389480_P002 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab389560 Zm00025ab389560_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab389560 Zm00025ab389560_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab389560 Zm00025ab389560_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab389560 Zm00025ab389560_P001 ubiquitous PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab389710 Zm00025ab389710_P002 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00025ab389920 Zm00025ab389920_P001 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab390020 Zm00025ab390020_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab390020 Zm00025ab390020_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab390020 Zm00025ab390020_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab390020 Zm00025ab390020_P001 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab390090 Zm00025ab390090_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab390090 Zm00025ab390090_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab390560 Zm00025ab390560_P002 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab390610 Zm00025ab390610_P002 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab390620 Zm00025ab390620_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab390660 Zm00025ab390660_P002 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00025ab390750 Zm00025ab390750_P001 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00025ab390750 Zm00025ab390750_P002 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00025ab390750 Zm00025ab390750_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab390820 Zm00025ab390820_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab390820 Zm00025ab390820_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab390820 Zm00025ab390820_P001 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00025ab390860 Zm00025ab390860_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00025ab390860 Zm00025ab390860_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00025ab390860 Zm00025ab390860_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00025ab390860 Zm00025ab390860_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab390910 Zm00025ab390910_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab390910 Zm00025ab390910_P001 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab390920 Zm00025ab390920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab390920 Zm00025ab390920_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab390920 Zm00025ab390920_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab390920 Zm00025ab390920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab390920 Zm00025ab390920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab390940 Zm00025ab390940_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab390940 Zm00025ab390940_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab390940 Zm00025ab390940_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab390950 Zm00025ab390950_P003 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab391010 Zm00025ab391010_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab391010 Zm00025ab391010_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab391010 Zm00025ab391010_P003 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab391010 Zm00025ab391010_P004 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391040 Zm00025ab391040_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391040 Zm00025ab391040_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391050 Zm00025ab391050_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391050 Zm00025ab391050_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391080 Zm00025ab391080_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391080 Zm00025ab391080_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391100 Zm00025ab391100_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391100 Zm00025ab391100_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391130 Zm00025ab391130_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391130 Zm00025ab391130_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391150 Zm00025ab391150_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391150 Zm00025ab391150_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391170 Zm00025ab391170_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391170 Zm00025ab391170_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391190 Zm00025ab391190_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391190 Zm00025ab391190_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391220 Zm00025ab391220_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391220 Zm00025ab391220_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391230 Zm00025ab391230_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391230 Zm00025ab391230_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00025ab391240 Zm00025ab391240_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00025ab391240 Zm00025ab391240_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab391390 Zm00025ab391390_P006 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P005 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00025ab391500 Zm00025ab391500_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab391510 Zm00025ab391510_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab391510 Zm00025ab391510_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab391510 Zm00025ab391510_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab391510 Zm00025ab391510_P003 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab391530 Zm00025ab391530_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab391690 Zm00025ab391690_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab391770 Zm00025ab391770_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab391770 Zm00025ab391770_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab391770 Zm00025ab391770_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab391810 Zm00025ab391810_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab391810 Zm00025ab391810_P001 viridiplantae PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00025ab392110 Zm00025ab392110_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab392160 Zm00025ab392160_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab392160 Zm00025ab392160_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab392160 Zm00025ab392160_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P004 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab392230 Zm00025ab392230_P005 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00025ab392360 Zm00025ab392360_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00025ab392360 Zm00025ab392360_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab392370 Zm00025ab392370_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P002 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P003 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00025ab392380 Zm00025ab392380_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab392480 Zm00025ab392480_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab392480 Zm00025ab392480_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab392480 Zm00025ab392480_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab392480 Zm00025ab392480_P004 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00025ab392480 Zm00025ab392480_P005 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab392580 Zm00025ab392580_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab392580 Zm00025ab392580_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab392580 Zm00025ab392580_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab392670 Zm00025ab392670_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab392670 Zm00025ab392670_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab392810 Zm00025ab392810_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab392810 Zm00025ab392810_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab392810 Zm00025ab392810_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab393040 Zm00025ab393040_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab393040 Zm00025ab393040_P002 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab393080 Zm00025ab393080_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab393080 Zm00025ab393080_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab393080 Zm00025ab393080_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab393080 Zm00025ab393080_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab393080 Zm00025ab393080_P001 excluded PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00025ab393100 Zm00025ab393100_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00025ab393180 Zm00025ab393180_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab393250 Zm00025ab393250_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab393250 Zm00025ab393250_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab393390 Zm00025ab393390_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab393390 Zm00025ab393390_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab393420 Zm00025ab393420_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab393420 Zm00025ab393420_P002 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab393430 Zm00025ab393430_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab393430 Zm00025ab393430_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab393430 Zm00025ab393430_P004 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00025ab393430 Zm00025ab393430_P005 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab393610 Zm00025ab393610_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab393670 Zm00025ab393670_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab393670 Zm00025ab393670_P002 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00025ab393730 Zm00025ab393730_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab393790 Zm00025ab393790_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab393790 Zm00025ab393790_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab393790 Zm00025ab393790_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P003 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P004 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P004 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P005 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P005 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P005 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P005 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P006 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P006 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P006 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab393940 Zm00025ab393940_P006 NA TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00025ab393960 Zm00025ab393960_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00025ab393960 Zm00025ab393960_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00025ab393960 Zm00025ab393960_P003 conditional PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00025ab394270 Zm00025ab394270_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab394270 Zm00025ab394270_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00025ab394270 Zm00025ab394270_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00025ab394270 Zm00025ab394270_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab394320 Zm00025ab394320_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab394370 Zm00025ab394370_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab394370 Zm00025ab394370_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab394370 Zm00025ab394370_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab394490 Zm00025ab394490_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab394490 Zm00025ab394490_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab394660 Zm00025ab394660_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab394660 Zm00025ab394660_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00025ab394700 Zm00025ab394700_P003 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab394740 Zm00025ab394740_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00025ab394740 Zm00025ab394740_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab395170 Zm00025ab395170_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab395170 Zm00025ab395170_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab395550 Zm00025ab395550_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab395550 Zm00025ab395550_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab395550 Zm00025ab395550_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab395670 Zm00025ab395670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab395670 Zm00025ab395670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab395670 Zm00025ab395670_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab395680 Zm00025ab395680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab395680 Zm00025ab395680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab395680 Zm00025ab395680_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab396320 Zm00025ab396320_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab396320 Zm00025ab396320_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab396320 Zm00025ab396320_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab396320 Zm00025ab396320_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab396320 Zm00025ab396320_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab396360 Zm00025ab396360_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab396360 Zm00025ab396360_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab396390 Zm00025ab396390_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab396400 Zm00025ab396400_P001 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab396740 Zm00025ab396740_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab396740 Zm00025ab396740_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab396740 Zm00025ab396740_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab396740 Zm00025ab396740_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab396790 Zm00025ab396790_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab396790 Zm00025ab396790_P004 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab396840 Zm00025ab396840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab396840 Zm00025ab396840_P003 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab396950 Zm00025ab396950_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab397000 Zm00025ab397000_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab397000 Zm00025ab397000_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab397030 Zm00025ab397030_P004 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab397240 Zm00025ab397240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab397240 Zm00025ab397240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab397240 Zm00025ab397240_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab397320 Zm00025ab397320_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab397320 Zm00025ab397320_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab397420 Zm00025ab397420_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00025ab397710 Zm00025ab397710_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab397710 Zm00025ab397710_P001 expected ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P001 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P002 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P003 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P004 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00025ab397800 Zm00025ab397800_P005 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab397920 Zm00025ab397920_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab398020 Zm00025ab398020_P002 conditional PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00025ab398310 Zm00025ab398310_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P004 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P004 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P005 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab398330 Zm00025ab398330_P005 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab398500 Zm00025ab398500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398500 Zm00025ab398500_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398500 Zm00025ab398500_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab398530 Zm00025ab398530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398530 Zm00025ab398530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398530 Zm00025ab398530_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab398540 Zm00025ab398540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398540 Zm00025ab398540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab398540 Zm00025ab398540_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab398680 Zm00025ab398680_P001 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00025ab398850 Zm00025ab398850_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00025ab398850 Zm00025ab398850_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00025ab398850 Zm00025ab398850_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab398900 Zm00025ab398900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab398900 Zm00025ab398900_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab398910 Zm00025ab398910_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab398910 Zm00025ab398910_P001 expected PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00025ab399690 Zm00025ab399690_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab399890 Zm00025ab399890_P005 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab400110 Zm00025ab400110_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00025ab400110 Zm00025ab400110_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab400110 Zm00025ab400110_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00025ab400110 Zm00025ab400110_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00025ab400110 Zm00025ab400110_P001 NA PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab400180 Zm00025ab400180_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab400340 Zm00025ab400340_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab400340 Zm00025ab400340_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab400350 Zm00025ab400350_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab400350 Zm00025ab400350_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab400450 Zm00025ab400450_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab400450 Zm00025ab400450_P002 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab400490 Zm00025ab400490_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab400490 Zm00025ab400490_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab400530 Zm00025ab400530_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab400530 Zm00025ab400530_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab400530 Zm00025ab400530_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab400580 Zm00025ab400580_P003 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P004 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P005 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab400620 Zm00025ab400620_P005 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00025ab400660 Zm00025ab400660_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00025ab400660 Zm00025ab400660_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00025ab400660 Zm00025ab400660_P001 conditional PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00025ab400670 Zm00025ab400670_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00025ab400670 Zm00025ab400670_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00025ab400670 Zm00025ab400670_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab400790 Zm00025ab400790_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab400800 Zm00025ab400800_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab400820 Zm00025ab400820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab400820 Zm00025ab400820_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab401060 Zm00025ab401060_P002 ubiquitous PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab401190 Zm00025ab401190_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab401190 Zm00025ab401190_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab401190 Zm00025ab401190_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab401190 Zm00025ab401190_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00025ab401190 Zm00025ab401190_P001 excluded PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00025ab401340 Zm00025ab401340_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab401460 Zm00025ab401460_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab401510 Zm00025ab401510_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab401510 Zm00025ab401510_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00025ab401510 Zm00025ab401510_P003 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab401770 Zm00025ab401770_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab401770 Zm00025ab401770_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab401780 Zm00025ab401780_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab401780 Zm00025ab401780_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab401780 Zm00025ab401780_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00025ab401780 Zm00025ab401780_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab401900 Zm00025ab401900_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab401900 Zm00025ab401900_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab401900 Zm00025ab401900_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00025ab401920 Zm00025ab401920_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00025ab401920 Zm00025ab401920_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00025ab401920 Zm00025ab401920_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab402010 Zm00025ab402010_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab402070 Zm00025ab402070_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab402070 Zm00025ab402070_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab402070 Zm00025ab402070_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab402070 Zm00025ab402070_P004 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab402070 Zm00025ab402070_P005 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00025ab402090 Zm00025ab402090_P002 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab402320 Zm00025ab402320_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab402320 Zm00025ab402320_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00025ab402320 Zm00025ab402320_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab402530 Zm00025ab402530_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab402640 Zm00025ab402640_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab402640 Zm00025ab402640_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab402640 Zm00025ab402640_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab402640 Zm00025ab402640_P004 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402680 Zm00025ab402680_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402680 Zm00025ab402680_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402690 Zm00025ab402690_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab402700 Zm00025ab402700_P001 ubiquitous PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402710 Zm00025ab402710_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402720 Zm00025ab402720_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402740 Zm00025ab402740_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab402740 Zm00025ab402740_P002 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab402960 Zm00025ab402960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab403140 Zm00025ab403140_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab403190 Zm00025ab403190_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00025ab403320 Zm00025ab403320_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00025ab403320 Zm00025ab403320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00025ab403320 Zm00025ab403320_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00025ab403320 Zm00025ab403320_P001 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab403670 Zm00025ab403670_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00025ab403670 Zm00025ab403670_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab403700 Zm00025ab403700_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab403700 Zm00025ab403700_P001 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00025ab403910 Zm00025ab403910_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00025ab403910 Zm00025ab403910_P001 expected PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00025ab404060 Zm00025ab404060_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00025ab404060 Zm00025ab404060_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab404080 Zm00025ab404080_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab404080 Zm00025ab404080_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P003 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P004 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P005 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00025ab404170 Zm00025ab404170_P006 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab404230 Zm00025ab404230_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab404290 Zm00025ab404290_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab404290 Zm00025ab404290_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab404290 Zm00025ab404290_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab404520 Zm00025ab404520_P001 conditional PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00025ab404610 Zm00025ab404610_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00025ab404610 Zm00025ab404610_P002 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00025ab404610 Zm00025ab404610_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab404670 Zm00025ab404670_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab404680 Zm00025ab404680_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P002 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P002 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P002 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P003 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P003 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P003 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00025ab404800 Zm00025ab404800_P003 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab404840 Zm00025ab404840_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab404840 Zm00025ab404840_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab404840 Zm00025ab404840_P003 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab404840 Zm00025ab404840_P004 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00025ab404840 Zm00025ab404840_P005 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab405130 Zm00025ab405130_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab405130 Zm00025ab405130_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab405130 Zm00025ab405130_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab405130 Zm00025ab405130_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab405130 Zm00025ab405130_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P004 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P005 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P005 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab405460 Zm00025ab405460_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab405570 Zm00025ab405570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405570 Zm00025ab405570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405570 Zm00025ab405570_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab405590 Zm00025ab405590_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab405660 Zm00025ab405660_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab405660 Zm00025ab405660_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab405660 Zm00025ab405660_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab405660 Zm00025ab405660_P002 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab405670 Zm00025ab405670_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab405710 Zm00025ab405710_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab405710 Zm00025ab405710_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab405730 Zm00025ab405730_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00025ab405870 Zm00025ab405870_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab405910 Zm00025ab405910_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab405910 Zm00025ab405910_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab406020 Zm00025ab406020_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab406500 Zm00025ab406500_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab406500 Zm00025ab406500_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab406500 Zm00025ab406500_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab406500 Zm00025ab406500_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00025ab406500 Zm00025ab406500_P005 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00025ab406620 Zm00025ab406620_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab406810 Zm00025ab406810_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00025ab406930 Zm00025ab406930_P004 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab407130 Zm00025ab407130_P001 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab407130 Zm00025ab407130_P002 NA PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab407130 Zm00025ab407130_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab407130 Zm00025ab407130_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab407130 Zm00025ab407130_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00025ab407130 Zm00025ab407130_P004 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00025ab407130 Zm00025ab407130_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00025ab407130 Zm00025ab407130_P005 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab407160 Zm00025ab407160_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab407210 Zm00025ab407210_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab407210 Zm00025ab407210_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00025ab407210 Zm00025ab407210_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00025ab407210 Zm00025ab407210_P003 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab407280 Zm00025ab407280_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab407280 Zm00025ab407280_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab407280 Zm00025ab407280_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab407560 Zm00025ab407560_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab407560 Zm00025ab407560_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00025ab407560 Zm00025ab407560_P001 ubiquitous PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00025ab407570 Zm00025ab407570_P001 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00025ab407570 Zm00025ab407570_P001 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00025ab407570 Zm00025ab407570_P001 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00025ab407570 Zm00025ab407570_P001 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00025ab407570 Zm00025ab407570_P002 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00025ab407570 Zm00025ab407570_P002 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00025ab407570 Zm00025ab407570_P002 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00025ab407570 Zm00025ab407570_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab407830 Zm00025ab407830_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab407830 Zm00025ab407830_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab407830 Zm00025ab407830_P003 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00025ab407840 Zm00025ab407840_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab408000 Zm00025ab408000_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab408160 Zm00025ab408160_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab408160 Zm00025ab408160_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab408320 Zm00025ab408320_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00025ab408480 Zm00025ab408480_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00025ab408480 Zm00025ab408480_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab408720 Zm00025ab408720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab408720 Zm00025ab408720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab408720 Zm00025ab408720_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab408870 Zm00025ab408870_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab408870 Zm00025ab408870_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab408870 Zm00025ab408870_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00025ab408900 Zm00025ab408900_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00025ab409010 Zm00025ab409010_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00025ab409010 Zm00025ab409010_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab409050 Zm00025ab409050_P001 viridiplantae PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00025ab409410 Zm00025ab409410_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8609 EC-4.2.3.86 Zm00025ab409410 Zm00025ab409410_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab409420 Zm00025ab409420_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00025ab409480 Zm00025ab409480_P002 conditional DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab409490 Zm00025ab409490_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab409490 Zm00025ab409490_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab409490 Zm00025ab409490_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab409490 Zm00025ab409490_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab409620 Zm00025ab409620_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00025ab409620 Zm00025ab409620_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab409840 Zm00025ab409840_P006 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab409850 Zm00025ab409850_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab409850 Zm00025ab409850_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00025ab409850 Zm00025ab409850_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00025ab409850 Zm00025ab409850_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab409970 Zm00025ab409970_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab409970 Zm00025ab409970_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab409970 Zm00025ab409970_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab409970 Zm00025ab409970_P004 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410230 Zm00025ab410230_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410230 Zm00025ab410230_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410230 Zm00025ab410230_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410240 Zm00025ab410240_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410240 Zm00025ab410240_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab410240 Zm00025ab410240_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab410280 Zm00025ab410280_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab410290 Zm00025ab410290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab410290 Zm00025ab410290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab410290 Zm00025ab410290_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00025ab410390 Zm00025ab410390_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab410410 Zm00025ab410410_P001 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab410570 Zm00025ab410570_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab410570 Zm00025ab410570_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab410570 Zm00025ab410570_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab410570 Zm00025ab410570_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab410570 Zm00025ab410570_P005 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab410730 Zm00025ab410730_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00025ab410890 Zm00025ab410890_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab410920 Zm00025ab410920_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab410920 Zm00025ab410920_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab410940 Zm00025ab410940_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab410940 Zm00025ab410940_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411020 Zm00025ab411020_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00025ab411060 Zm00025ab411060_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00025ab411060 Zm00025ab411060_P001 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab411090 Zm00025ab411090_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab411230 Zm00025ab411230_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab411230 Zm00025ab411230_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab411230 Zm00025ab411230_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab411230 Zm00025ab411230_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab411230 Zm00025ab411230_P005 NA XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00025ab411270 Zm00025ab411270_P001 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411280 Zm00025ab411280_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411280 Zm00025ab411280_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411310 Zm00025ab411310_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411310 Zm00025ab411310_P001 ubiquitous PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00025ab411330 Zm00025ab411330_P001 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab411340 Zm00025ab411340_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab411370 Zm00025ab411370_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab411380 Zm00025ab411380_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab411390 Zm00025ab411390_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411430 Zm00025ab411430_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411430 Zm00025ab411430_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab411450 Zm00025ab411450_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411460 Zm00025ab411460_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00025ab411460 Zm00025ab411460_P001 ubiquitous PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab411550 Zm00025ab411550_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00025ab411550 Zm00025ab411550_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00025ab411570 Zm00025ab411570_P002 NA PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00025ab411580 Zm00025ab411580_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00025ab411600 Zm00025ab411600_P001 conditional PWY-4984 urea cycle ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00025ab411600 Zm00025ab411600_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00025ab411600 Zm00025ab411600_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00025ab411600 Zm00025ab411600_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab411620 Zm00025ab411620_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab411620 Zm00025ab411620_P001 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab411730 Zm00025ab411730_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00025ab411730 Zm00025ab411730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411780 Zm00025ab411780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411780 Zm00025ab411780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411780 Zm00025ab411780_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411780 Zm00025ab411780_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab411780 Zm00025ab411780_P005 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab411800 Zm00025ab411800_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab411800 Zm00025ab411800_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab411800 Zm00025ab411800_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab411810 Zm00025ab411810_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab411870 Zm00025ab411870_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00025ab411880 Zm00025ab411880_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00025ab411920 Zm00025ab411920_P001 ubiquitous ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab412230 Zm00025ab412230_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab412230 Zm00025ab412230_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab412230 Zm00025ab412230_P003 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab412230 Zm00025ab412230_P004 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00025ab412310 Zm00025ab412310_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab412370 Zm00025ab412370_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab412370 Zm00025ab412370_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab412390 Zm00025ab412390_P001 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab412440 Zm00025ab412440_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab412440 Zm00025ab412440_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab412440 Zm00025ab412440_P003 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00025ab412440 Zm00025ab412440_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab412440 Zm00025ab412440_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab412450 Zm00025ab412450_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P005 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00025ab412570 Zm00025ab412570_P006 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab412670 Zm00025ab412670_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab412670 Zm00025ab412670_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00025ab412900 Zm00025ab412900_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab412910 Zm00025ab412910_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab412910 Zm00025ab412910_P002 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00025ab412910 Zm00025ab412910_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00025ab412960 Zm00025ab412960_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab413070 Zm00025ab413070_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab413070 Zm00025ab413070_P002 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab413330 Zm00025ab413330_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab413460 Zm00025ab413460_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P006 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P007 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00025ab413560 Zm00025ab413560_P007 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab413730 Zm00025ab413730_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab413730 Zm00025ab413730_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab413730 Zm00025ab413730_P001 conditional PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab413810 Zm00025ab413810_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab413810 Zm00025ab413810_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab413810 Zm00025ab413810_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab413810 Zm00025ab413810_P001 manual PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00025ab413830 Zm00025ab413830_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P005 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P006 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P007 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00025ab413870 Zm00025ab413870_P008 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00025ab413940 Zm00025ab413940_P001 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab413960 Zm00025ab413960_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab413960 Zm00025ab413960_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab413960 Zm00025ab413960_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab413960 Zm00025ab413960_P004 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab414030 Zm00025ab414030_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab414030 Zm00025ab414030_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00025ab414030 Zm00025ab414030_P003 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab414130 Zm00025ab414130_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab414130 Zm00025ab414130_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab414130 Zm00025ab414130_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00025ab414200 Zm00025ab414200_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab414330 Zm00025ab414330_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00025ab414340 Zm00025ab414340_P001 expected PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab414470 Zm00025ab414470_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab414470 Zm00025ab414470_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab414470 Zm00025ab414470_P001 NA PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab414570 Zm00025ab414570_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab414570 Zm00025ab414570_P001 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab414590 Zm00025ab414590_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab414590 Zm00025ab414590_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00025ab414590 Zm00025ab414590_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab414600 Zm00025ab414600_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab414630 Zm00025ab414630_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab414730 Zm00025ab414730_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab414730 Zm00025ab414730_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab414730 Zm00025ab414730_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00025ab414730 Zm00025ab414730_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab414730 Zm00025ab414730_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00025ab414730 Zm00025ab414730_P002 NA PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00025ab414750 Zm00025ab414750_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00025ab414750 Zm00025ab414750_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00025ab414950 Zm00025ab414950_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00025ab414950 Zm00025ab414950_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00025ab415080 Zm00025ab415080_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab415120 Zm00025ab415120_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P004 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab415180 Zm00025ab415180_P005 NA PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00025ab415250 Zm00025ab415250_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00025ab415300 Zm00025ab415300_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab415310 Zm00025ab415310_P002 conditional PWY-5116 sakuranetin biosynthesis RXN-7773 EC-2.1.1.232 Zm00025ab415630 Zm00025ab415630_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab415650 Zm00025ab415650_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab415740 Zm00025ab415740_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab415740 Zm00025ab415740_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab415740 Zm00025ab415740_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab415740 Zm00025ab415740_P004 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00025ab415800 Zm00025ab415800_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab415800 Zm00025ab415800_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00025ab415800 Zm00025ab415800_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00025ab415800 Zm00025ab415800_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00025ab415800 Zm00025ab415800_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00025ab415800 Zm00025ab415800_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab415810 Zm00025ab415810_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab415810 Zm00025ab415810_P002 expected PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab415970 Zm00025ab415970_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00025ab415970 Zm00025ab415970_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00025ab416010 Zm00025ab416010_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00025ab416010 Zm00025ab416010_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab416020 Zm00025ab416020_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab416160 Zm00025ab416160_P001 ubiquitous PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab416240 Zm00025ab416240_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab416240 Zm00025ab416240_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00025ab416240 Zm00025ab416240_P003 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416250 Zm00025ab416250_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P005 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P006 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab416260 Zm00025ab416260_P007 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab416350 Zm00025ab416350_P001 viridiplantae PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab416520 Zm00025ab416520_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab416520 Zm00025ab416520_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab416680 Zm00025ab416680_P003 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab416750 Zm00025ab416750_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab416750 Zm00025ab416750_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00025ab416750 Zm00025ab416750_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00025ab416750 Zm00025ab416750_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab417180 Zm00025ab417180_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab417350 Zm00025ab417350_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab417380 Zm00025ab417380_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab417410 Zm00025ab417410_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab417550 Zm00025ab417550_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab417550 Zm00025ab417550_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab417550 Zm00025ab417550_P003 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00025ab417810 Zm00025ab417810_P002 ubiquitous PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab417900 Zm00025ab417900_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00025ab417900 Zm00025ab417900_P003 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab418100 Zm00025ab418100_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab418100 Zm00025ab418100_P001 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab418100 Zm00025ab418100_P002 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00025ab418100 Zm00025ab418100_P002 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00025ab418160 Zm00025ab418160_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab418210 Zm00025ab418210_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab418210 Zm00025ab418210_P002 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00025ab418260 Zm00025ab418260_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab418410 Zm00025ab418410_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab418410 Zm00025ab418410_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab418410 Zm00025ab418410_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab418420 Zm00025ab418420_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab418420 Zm00025ab418420_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab418420 Zm00025ab418420_P001 conditional PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00025ab418440 Zm00025ab418440_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00025ab418580 Zm00025ab418580_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab418940 Zm00025ab418940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab418940 Zm00025ab418940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab418940 Zm00025ab418940_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab418970 Zm00025ab418970_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab418970 Zm00025ab418970_P003 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab418980 Zm00025ab418980_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab419170 Zm00025ab419170_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab419170 Zm00025ab419170_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00025ab419170 Zm00025ab419170_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00025ab419250 Zm00025ab419250_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P003 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P004 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P004 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab419280 Zm00025ab419280_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab419300 Zm00025ab419300_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00025ab419370 Zm00025ab419370_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab419510 Zm00025ab419510_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab419510 Zm00025ab419510_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab419630 Zm00025ab419630_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab419630 Zm00025ab419630_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab419630 Zm00025ab419630_P003 ubiquitous PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00025ab419800 Zm00025ab419800_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab419950 Zm00025ab419950_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab419950 Zm00025ab419950_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab419950 Zm00025ab419950_P003 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00025ab420010 Zm00025ab420010_P004 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab420070 Zm00025ab420070_P001 ubiquitous PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00025ab420120 Zm00025ab420120_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00025ab420120 Zm00025ab420120_P002 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00025ab420120 Zm00025ab420120_P003 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00025ab420120 Zm00025ab420120_P004 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00025ab420120 Zm00025ab420120_P005 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab420180 Zm00025ab420180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab420180 Zm00025ab420180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab420180 Zm00025ab420180_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab420190 Zm00025ab420190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab420190 Zm00025ab420190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab420190 Zm00025ab420190_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab420200 Zm00025ab420200_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab420200 Zm00025ab420200_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab420200 Zm00025ab420200_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab420210 Zm00025ab420210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab420210 Zm00025ab420210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab420210 Zm00025ab420210_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab420220 Zm00025ab420220_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab420240 Zm00025ab420240_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab420240 Zm00025ab420240_P003 ubiquitous ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00025ab420360 Zm00025ab420360_P003 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab420450 Zm00025ab420450_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab420460 Zm00025ab420460_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab420600 Zm00025ab420600_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab420640 Zm00025ab420640_P002 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00025ab420710 Zm00025ab420710_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00025ab420780 Zm00025ab420780_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00025ab420860 Zm00025ab420860_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00025ab420870 Zm00025ab420870_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab420960 Zm00025ab420960_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab421010 Zm00025ab421010_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00025ab421010 Zm00025ab421010_P003 expected HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab421100 Zm00025ab421100_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab421100 Zm00025ab421100_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00025ab421100 Zm00025ab421100_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab421210 Zm00025ab421210_P001 expected PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab421260 Zm00025ab421260_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00025ab421260 Zm00025ab421260_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab421270 Zm00025ab421270_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab421300 Zm00025ab421300_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab421300 Zm00025ab421300_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab421620 Zm00025ab421620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab421620 Zm00025ab421620_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab421640 Zm00025ab421640_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab421640 Zm00025ab421640_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab421640 Zm00025ab421640_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab421640 Zm00025ab421640_P004 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00025ab422060 Zm00025ab422060_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab422100 Zm00025ab422100_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab422100 Zm00025ab422100_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab422100 Zm00025ab422100_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab422100 Zm00025ab422100_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab422250 Zm00025ab422250_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab422260 Zm00025ab422260_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab422290 Zm00025ab422290_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab422290 Zm00025ab422290_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab422360 Zm00025ab422360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab422360 Zm00025ab422360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab422360 Zm00025ab422360_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab422390 Zm00025ab422390_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab422400 Zm00025ab422400_P001 conditional PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00025ab422500 Zm00025ab422500_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00025ab422500 Zm00025ab422500_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00025ab422500 Zm00025ab422500_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab422580 Zm00025ab422580_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00025ab422590 Zm00025ab422590_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00025ab422590 Zm00025ab422590_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab422630 Zm00025ab422630_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab422640 Zm00025ab422640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab422700 Zm00025ab422700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab422700 Zm00025ab422700_P002 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab422750 Zm00025ab422750_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00025ab422750 Zm00025ab422750_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab423270 Zm00025ab423270_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab423510 Zm00025ab423510_P006 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab423540 Zm00025ab423540_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab423560 Zm00025ab423560_P003 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00025ab423710 Zm00025ab423710_P002 conditional PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00025ab423870 Zm00025ab423870_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab423950 Zm00025ab423950_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab423950 Zm00025ab423950_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab423950 Zm00025ab423950_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00025ab424070 Zm00025ab424070_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab424150 Zm00025ab424150_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00025ab424150 Zm00025ab424150_P002 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab424200 Zm00025ab424200_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab424200 Zm00025ab424200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab424200 Zm00025ab424200_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab424200 Zm00025ab424200_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00025ab424450 Zm00025ab424450_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1884 EC-1.1.1.316 Zm00025ab424460 Zm00025ab424460_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00025ab424500 Zm00025ab424500_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00025ab424500 Zm00025ab424500_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab424650 Zm00025ab424650_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00025ab424650 Zm00025ab424650_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P005 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P006 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P007 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00025ab424840 Zm00025ab424840_P008 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab425010 Zm00025ab425010_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab425010 Zm00025ab425010_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P003 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00025ab425100 Zm00025ab425100_P003 conditional PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00025ab425430 Zm00025ab425430_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00025ab425430 Zm00025ab425430_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab425450 Zm00025ab425450_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab425450 Zm00025ab425450_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00025ab425450 Zm00025ab425450_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00025ab425450 Zm00025ab425450_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00025ab425450 Zm00025ab425450_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00025ab425450 Zm00025ab425450_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00025ab425450 Zm00025ab425450_P002 viridiplantae PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00025ab425580 Zm00025ab425580_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00025ab425590 Zm00025ab425590_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00025ab425590 Zm00025ab425590_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab425790 Zm00025ab425790_P001 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P001 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P002 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00025ab425850 Zm00025ab425850_P003 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab425970 Zm00025ab425970_P003 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00025ab425980 Zm00025ab425980_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00025ab425980 Zm00025ab425980_P002 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00025ab426100 Zm00025ab426100_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00025ab426140 Zm00025ab426140_P001 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00025ab426180 Zm00025ab426180_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab426230 Zm00025ab426230_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00025ab426270 Zm00025ab426270_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00025ab426360 Zm00025ab426360_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab426470 Zm00025ab426470_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab426470 Zm00025ab426470_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab426470 Zm00025ab426470_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab426470 Zm00025ab426470_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00025ab426470 Zm00025ab426470_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab426550 Zm00025ab426550_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab426680 Zm00025ab426680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab426680 Zm00025ab426680_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab426680 Zm00025ab426680_P004 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab426700 Zm00025ab426700_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab426700 Zm00025ab426700_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab426720 Zm00025ab426720_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab426720 Zm00025ab426720_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab426720 Zm00025ab426720_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00025ab426720 Zm00025ab426720_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab426940 Zm00025ab426940_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab427010 Zm00025ab427010_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab427010 Zm00025ab427010_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab427010 Zm00025ab427010_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab427010 Zm00025ab427010_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00025ab427120 Zm00025ab427120_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P006 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P007 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P007 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P007 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P008 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P008 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P008 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P009 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P009 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab427130 Zm00025ab427130_P009 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab427240 Zm00025ab427240_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab427240 Zm00025ab427240_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab427240 Zm00025ab427240_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P003 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P004 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P005 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427350 Zm00025ab427350_P006 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427350 Zm00025ab427350_P006 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427390 Zm00025ab427390_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427390 Zm00025ab427390_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427430 Zm00025ab427430_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427430 Zm00025ab427430_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427430 Zm00025ab427430_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427430 Zm00025ab427430_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427430 Zm00025ab427430_P003 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427430 Zm00025ab427430_P003 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab427450 Zm00025ab427450_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab427580 Zm00025ab427580_P005 NA TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab427610 Zm00025ab427610_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab427710 Zm00025ab427710_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab427710 Zm00025ab427710_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P001 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P002 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P002 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P003 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P003 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P003 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P004 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P004 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P004 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P005 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P005 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00025ab427750 Zm00025ab427750_P005 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab427770 Zm00025ab427770_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00025ab427880 Zm00025ab427880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00025ab427880 Zm00025ab427880_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab428200 Zm00025ab428200_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00025ab428200 Zm00025ab428200_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab428300 Zm00025ab428300_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab428300 Zm00025ab428300_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab428300 Zm00025ab428300_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00025ab428300 Zm00025ab428300_P002 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab428310 Zm00025ab428310_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab428340 Zm00025ab428340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab428340 Zm00025ab428340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab428340 Zm00025ab428340_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00025ab428650 Zm00025ab428650_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00025ab428650 Zm00025ab428650_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00025ab428650 Zm00025ab428650_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00025ab428650 Zm00025ab428650_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00025ab428650 Zm00025ab428650_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00025ab428650 Zm00025ab428650_P003 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab428750 Zm00025ab428750_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab428750 Zm00025ab428750_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00025ab428750 Zm00025ab428750_P003 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00025ab428850 Zm00025ab428850_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab428930 Zm00025ab428930_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429040 Zm00025ab429040_P001 conditional PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab429120 Zm00025ab429120_P001 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab429120 Zm00025ab429120_P002 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab429120 Zm00025ab429120_P003 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab429120 Zm00025ab429120_P004 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00025ab429120 Zm00025ab429120_P005 viridiplantae PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00025ab429180 Zm00025ab429180_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00025ab429190 Zm00025ab429190_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00025ab429200 Zm00025ab429200_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00025ab429210 Zm00025ab429210_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429220 Zm00025ab429220_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429220 Zm00025ab429220_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429220 Zm00025ab429220_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429220 Zm00025ab429220_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab429220 Zm00025ab429220_P005 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab429350 Zm00025ab429350_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab429350 Zm00025ab429350_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab429380 Zm00025ab429380_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab429380 Zm00025ab429380_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab429380 Zm00025ab429380_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00025ab429380 Zm00025ab429380_P005 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab429400 Zm00025ab429400_P001 conditional PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00025ab429500 Zm00025ab429500_P001 ubiquitous PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00025ab429560 Zm00025ab429560_P001 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab429580 Zm00025ab429580_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab429670 Zm00025ab429670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab429720 Zm00025ab429720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab429720 Zm00025ab429720_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab429730 Zm00025ab429730_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab429730 Zm00025ab429730_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00025ab429730 Zm00025ab429730_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab429950 Zm00025ab429950_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab429950 Zm00025ab429950_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab429950 Zm00025ab429950_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab429950 Zm00025ab429950_P002 conditional PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00025ab430010 Zm00025ab430010_P001 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00025ab430010 Zm00025ab430010_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab430080 Zm00025ab430080_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab430080 Zm00025ab430080_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab430080 Zm00025ab430080_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab430080 Zm00025ab430080_P004 NA PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab430100 Zm00025ab430100_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab430100 Zm00025ab430100_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab430100 Zm00025ab430100_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab430100 Zm00025ab430100_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab430100 Zm00025ab430100_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab430100 Zm00025ab430100_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab430100 Zm00025ab430100_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab430100 Zm00025ab430100_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00025ab430100 Zm00025ab430100_P005 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00025ab430100 Zm00025ab430100_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab430150 Zm00025ab430150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab430150 Zm00025ab430150_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab430150 Zm00025ab430150_P003 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab430200 Zm00025ab430200_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00025ab430240 Zm00025ab430240_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00025ab430240 Zm00025ab430240_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00025ab430240 Zm00025ab430240_P001 conditional PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab430420 Zm00025ab430420_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab430420 Zm00025ab430420_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00025ab430420 Zm00025ab430420_P001 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00025ab430460 Zm00025ab430460_P001 ubiquitous PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab430630 Zm00025ab430630_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab430630 Zm00025ab430630_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00025ab430630 Zm00025ab430630_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab430630 Zm00025ab430630_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab430870 Zm00025ab430870_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab430870 Zm00025ab430870_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab430920 Zm00025ab430920_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab430950 Zm00025ab430950_P001 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab431030 Zm00025ab431030_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00025ab431030 Zm00025ab431030_P002 NA RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab431100 Zm00025ab431100_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab431100 Zm00025ab431100_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab431160 Zm00025ab431160_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00025ab431160 Zm00025ab431160_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00025ab431170 Zm00025ab431170_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00025ab431170 Zm00025ab431170_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00025ab431270 Zm00025ab431270_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab431300 Zm00025ab431300_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab431320 Zm00025ab431320_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab431320 Zm00025ab431320_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab431320 Zm00025ab431320_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00025ab431350 Zm00025ab431350_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00025ab431350 Zm00025ab431350_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00025ab431350 Zm00025ab431350_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00025ab431480 Zm00025ab431480_P004 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab431650 Zm00025ab431650_P001 conditional PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00025ab431650 Zm00025ab431650_P001 conditional PWY-6243 bergamotene biosynthesis I RXN-8621 EC-4.2.3.81 Zm00025ab431650 Zm00025ab431650_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00025ab431650 Zm00025ab431650_P002 conditional PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00025ab431650 Zm00025ab431650_P002 conditional PWY-6243 bergamotene biosynthesis I RXN-8621 EC-4.2.3.81 Zm00025ab431650 Zm00025ab431650_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab431870 Zm00025ab431870_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab431870 Zm00025ab431870_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00025ab431970 Zm00025ab431970_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00025ab431970 Zm00025ab431970_P002 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00025ab431970 Zm00025ab431970_P003 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00025ab431970 Zm00025ab431970_P004 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab431970 Zm00025ab431970_P005 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab431970 Zm00025ab431970_P005 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00025ab431970 Zm00025ab431970_P005 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00025ab431990 Zm00025ab431990_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00025ab431990 Zm00025ab431990_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab432190 Zm00025ab432190_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab432190 Zm00025ab432190_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00025ab432190 Zm00025ab432190_P001 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab432210 Zm00025ab432210_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab432250 Zm00025ab432250_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab432250 Zm00025ab432250_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab432250 Zm00025ab432250_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00025ab432340 Zm00025ab432340_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00025ab432360 Zm00025ab432360_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab432480 Zm00025ab432480_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab432480 Zm00025ab432480_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00025ab432630 Zm00025ab432630_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00025ab432630 Zm00025ab432630_P002 viridiplantae PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00025ab432910 Zm00025ab432910_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab433000 Zm00025ab433000_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab433000 Zm00025ab433000_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab433000 Zm00025ab433000_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00025ab433000 Zm00025ab433000_P002 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab433360 Zm00025ab433360_P001 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00025ab433490 Zm00025ab433490_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00025ab433500 Zm00025ab433500_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab433520 Zm00025ab433520_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab433530 Zm00025ab433530_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab433530 Zm00025ab433530_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab433530 Zm00025ab433530_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00025ab433530 Zm00025ab433530_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab433900 Zm00025ab433900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab433900 Zm00025ab433900_P002 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab434000 Zm00025ab434000_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab434000 Zm00025ab434000_P003 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00025ab434000 Zm00025ab434000_P004 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P006 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab434040 Zm00025ab434040_P007 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434130 Zm00025ab434130_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434140 Zm00025ab434140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434140 Zm00025ab434140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434140 Zm00025ab434140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434150 Zm00025ab434150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434150 Zm00025ab434150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434150 Zm00025ab434150_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434170 Zm00025ab434170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434170 Zm00025ab434170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434170 Zm00025ab434170_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab434250 Zm00025ab434250_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434260 Zm00025ab434260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434260 Zm00025ab434260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434260 Zm00025ab434260_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434280 Zm00025ab434280_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab434290 Zm00025ab434290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434290 Zm00025ab434290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab434290 Zm00025ab434290_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00025ab434300 Zm00025ab434300_P004 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00025ab434390 Zm00025ab434390_P001 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab434430 Zm00025ab434430_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab434430 Zm00025ab434430_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00025ab434440 Zm00025ab434440_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00025ab434440 Zm00025ab434440_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCONOLACT-RXN EC-3.1.1.17 Zm00025ab434520 Zm00025ab434520_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOLACT-RXN EC-3.1.1.17 Zm00025ab434520 Zm00025ab434520_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00025ab434630 Zm00025ab434630_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P006 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00025ab434850 Zm00025ab434850_P006 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab434940 Zm00025ab434940_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab434990 Zm00025ab434990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab434990 Zm00025ab434990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab434990 Zm00025ab434990_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435030 Zm00025ab435030_P001 ubiquitous PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00025ab435050 Zm00025ab435050_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00025ab435050 Zm00025ab435050_P001 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435070 Zm00025ab435070_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435090 Zm00025ab435090_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435100 Zm00025ab435100_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab435140 Zm00025ab435140_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00025ab435170 Zm00025ab435170_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435180 Zm00025ab435180_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00025ab435180 Zm00025ab435180_P004 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab435430 Zm00025ab435430_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00025ab435430 Zm00025ab435430_P001 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab435570 Zm00025ab435570_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab435570 Zm00025ab435570_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab435580 Zm00025ab435580_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00025ab435580 Zm00025ab435580_P002 NA ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00025ab435590 Zm00025ab435590_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab435700 Zm00025ab435700_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab435700 Zm00025ab435700_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00025ab435700 Zm00025ab435700_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00025ab435700 Zm00025ab435700_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab435860 Zm00025ab435860_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab435860 Zm00025ab435860_P002 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00025ab436040 Zm00025ab436040_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00025ab436140 Zm00025ab436140_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00025ab436140 Zm00025ab436140_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00025ab436140 Zm00025ab436140_P001 conditional PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab436150 Zm00025ab436150_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab436150 Zm00025ab436150_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00025ab436150 Zm00025ab436150_P001 NA PWY-4261 glycerol degradation I RXN-15745 EC-1.1.5.3 Zm00025ab436170 Zm00025ab436170_P001 viridiplantae PWY-6952 glycerophosphodiester degradation RXN-15745 EC-1.1.5.3 Zm00025ab436170 Zm00025ab436170_P001 conditional PWY-6118 glycerol-3-phosphate shuttle RXN-15745 EC-1.1.5.3 Zm00025ab436170 Zm00025ab436170_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00025ab436230 Zm00025ab436230_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00025ab436230 Zm00025ab436230_P001 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab436300 Zm00025ab436300_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab436300 Zm00025ab436300_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab436300 Zm00025ab436300_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab436300 Zm00025ab436300_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab436300 Zm00025ab436300_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab436300 Zm00025ab436300_P003 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab436300 Zm00025ab436300_P004 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab436300 Zm00025ab436300_P004 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00025ab436300 Zm00025ab436300_P005 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab436300 Zm00025ab436300_P005 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab436400 Zm00025ab436400_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab436400 Zm00025ab436400_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00025ab436400 Zm00025ab436400_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00025ab436400 Zm00025ab436400_P002 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab436460 Zm00025ab436460_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab436460 Zm00025ab436460_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab436470 Zm00025ab436470_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab436470 Zm00025ab436470_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00025ab436470 Zm00025ab436470_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab436510 Zm00025ab436510_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab436630 Zm00025ab436630_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab436860 Zm00025ab436860_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab436990 Zm00025ab436990_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab437220 Zm00025ab437220_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab437220 Zm00025ab437220_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab437220 Zm00025ab437220_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00025ab437220 Zm00025ab437220_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab437240 Zm00025ab437240_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab437240 Zm00025ab437240_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00025ab437240 Zm00025ab437240_P003 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab437400 Zm00025ab437400_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab437400 Zm00025ab437400_P002 ubiquitous PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab437450 Zm00025ab437450_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00025ab437450 Zm00025ab437450_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00025ab437500 Zm00025ab437500_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00025ab437500 Zm00025ab437500_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00025ab437540 Zm00025ab437540_P003 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab437590 Zm00025ab437590_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab437600 Zm00025ab437600_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab437680 Zm00025ab437680_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab437780 Zm00025ab437780_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab437780 Zm00025ab437780_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00025ab437780 Zm00025ab437780_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00025ab437780 Zm00025ab437780_P002 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab437970 Zm00025ab437970_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab437970 Zm00025ab437970_P002 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab438010 Zm00025ab438010_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab438010 Zm00025ab438010_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00025ab438010 Zm00025ab438010_P003 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab438330 Zm00025ab438330_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00025ab438330 Zm00025ab438330_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00025ab438420 Zm00025ab438420_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab438430 Zm00025ab438430_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab438430 Zm00025ab438430_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab438430 Zm00025ab438430_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00025ab438430 Zm00025ab438430_P004 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00025ab438930 Zm00025ab438930_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00025ab438970 Zm00025ab438970_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00025ab438990 Zm00025ab438990_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00025ab438990 Zm00025ab438990_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab439100 Zm00025ab439100_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab439110 Zm00025ab439110_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab439110 Zm00025ab439110_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00025ab439120 Zm00025ab439120_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab439290 Zm00025ab439290_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab439290 Zm00025ab439290_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab439290 Zm00025ab439290_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab439290 Zm00025ab439290_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab439320 Zm00025ab439320_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab439320 Zm00025ab439320_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab439320 Zm00025ab439320_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab439320 Zm00025ab439320_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00025ab439420 Zm00025ab439420_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00025ab439420 Zm00025ab439420_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00025ab439420 Zm00025ab439420_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00025ab439420 Zm00025ab439420_P001 NA PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00025ab439450 Zm00025ab439450_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab439470 Zm00025ab439470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab439470 Zm00025ab439470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab439470 Zm00025ab439470_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab439550 Zm00025ab439550_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab439550 Zm00025ab439550_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab439550 Zm00025ab439550_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00025ab439550 Zm00025ab439550_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab439580 Zm00025ab439580_P001 expected PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab439890 Zm00025ab439890_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab439890 Zm00025ab439890_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab439890 Zm00025ab439890_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab439910 Zm00025ab439910_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab439990 Zm00025ab439990_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00025ab440050 Zm00025ab440050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab440120 Zm00025ab440120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab440140 Zm00025ab440140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab440140 Zm00025ab440140_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab440140 Zm00025ab440140_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab440140 Zm00025ab440140_P004 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab440460 Zm00025ab440460_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00025ab440460 Zm00025ab440460_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00025ab440460 Zm00025ab440460_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440500 Zm00025ab440500_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440500 Zm00025ab440500_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440500 Zm00025ab440500_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440500 Zm00025ab440500_P004 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440510 Zm00025ab440510_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00025ab440510 Zm00025ab440510_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab440570 Zm00025ab440570_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab440570 Zm00025ab440570_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00025ab440570 Zm00025ab440570_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00025ab440620 Zm00025ab440620_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00025ab440620 Zm00025ab440620_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00025ab440620 Zm00025ab440620_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab441040 Zm00025ab441040_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00025ab441040 Zm00025ab441040_P002 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441120 Zm00025ab441120_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab441120 Zm00025ab441120_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441190 Zm00025ab441190_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab441230 Zm00025ab441230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00025ab441270 Zm00025ab441270_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00025ab441280 Zm00025ab441280_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab441320 Zm00025ab441320_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab441450 Zm00025ab441450_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab441450 Zm00025ab441450_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00025ab441450 Zm00025ab441450_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab441470 Zm00025ab441470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab441470 Zm00025ab441470_P002 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab441480 Zm00025ab441480_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00025ab441480 Zm00025ab441480_P002 expected PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00025ab441570 Zm00025ab441570_P001 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00025ab441570 Zm00025ab441570_P002 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00025ab441570 Zm00025ab441570_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab441650 Zm00025ab441650_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab441650 Zm00025ab441650_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab441650 Zm00025ab441650_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab441650 Zm00025ab441650_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00025ab441650 Zm00025ab441650_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab441680 Zm00025ab441680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab441680 Zm00025ab441680_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab441690 Zm00025ab441690_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab441690 Zm00025ab441690_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab441690 Zm00025ab441690_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab441690 Zm00025ab441690_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00025ab441690 Zm00025ab441690_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00025ab441690 Zm00025ab441690_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab441710 Zm00025ab441710_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab441710 Zm00025ab441710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00025ab441710 Zm00025ab441710_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00025ab441820 Zm00025ab441820_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00025ab442020 Zm00025ab442020_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab442050 Zm00025ab442050_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00025ab442100 Zm00025ab442100_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00025ab442100 Zm00025ab442100_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00025ab442180 Zm00025ab442180_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00025ab442480 Zm00025ab442480_P001 conditional PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00025ab442510 Zm00025ab442510_P001 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00025ab442510 Zm00025ab442510_P002 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00025ab442590 Zm00025ab442590_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab442670 Zm00025ab442670_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00025ab442680 Zm00025ab442680_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab442770 Zm00025ab442770_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00025ab442820 Zm00025ab442820_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00025ab442820 Zm00025ab442820_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab442830 Zm00025ab442830_P002 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab442840 Zm00025ab442840_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00025ab443080 Zm00025ab443080_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-7569 EC-2.1.1.329 Zm00025ab443240 Zm00025ab443240_P001 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00025ab443250 Zm00025ab443250_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab443380 Zm00025ab443380_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab443380 Zm00025ab443380_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab443380 Zm00025ab443380_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab443380 Zm00025ab443380_P004 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00025ab443380 Zm00025ab443380_P005 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443490 Zm00025ab443490_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443490 Zm00025ab443490_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443510 Zm00025ab443510_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443510 Zm00025ab443510_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443510 Zm00025ab443510_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00025ab443510 Zm00025ab443510_P004 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab443540 Zm00025ab443540_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab443550 Zm00025ab443550_P001 conditional GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab443650 Zm00025ab443650_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab443650 Zm00025ab443650_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00025ab443650 Zm00025ab443650_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab443740 Zm00025ab443740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab443740 Zm00025ab443740_P002 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab443860 Zm00025ab443860_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab443860 Zm00025ab443860_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00025ab443940 Zm00025ab443940_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab444200 Zm00025ab444200_P001 expected PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab444280 Zm00025ab444280_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab444280 Zm00025ab444280_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab444410 Zm00025ab444410_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab444470 Zm00025ab444470_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00025ab444480 Zm00025ab444480_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab444650 Zm00025ab444650_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab444650 Zm00025ab444650_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00025ab444650 Zm00025ab444650_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00025ab444650 Zm00025ab444650_P002 conditional GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab444820 Zm00025ab444820_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00025ab444820 Zm00025ab444820_P001 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab444970 Zm00025ab444970_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00025ab445020 Zm00025ab445020_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab445100 Zm00025ab445100_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab445100 Zm00025ab445100_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00025ab445100 Zm00025ab445100_P003 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00025ab445230 Zm00025ab445230_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab445570 Zm00025ab445570_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P003 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00025ab445630 Zm00025ab445630_P003 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab445830 Zm00025ab445830_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab445880 Zm00025ab445880_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab445880 Zm00025ab445880_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab445880 Zm00025ab445880_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00025ab445880 Zm00025ab445880_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab446400 Zm00025ab446400_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab446400 Zm00025ab446400_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P003 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P003 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P003 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab446400 Zm00025ab446400_P003 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P004 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P004 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P004 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P004 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab446400 Zm00025ab446400_P004 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P005 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P005 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P005 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00025ab446400 Zm00025ab446400_P005 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab446400 Zm00025ab446400_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab446420 Zm00025ab446420_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab446420 Zm00025ab446420_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00025ab446420 Zm00025ab446420_P003 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00025ab446470 Zm00025ab446470_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab446470 Zm00025ab446470_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00025ab446470 Zm00025ab446470_P001 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab446920 Zm00025ab446920_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab446920 Zm00025ab446920_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00025ab446920 Zm00025ab446920_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00025ab446920 Zm00025ab446920_P003 manual PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00025ab447440 Zm00025ab447440_P001 ubiquitous PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab447870 Zm00025ab447870_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab447870 Zm00025ab447870_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00025ab447870 Zm00025ab447870_P003 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00025ab447940 Zm00025ab447940_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab448030 Zm00025ab448030_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab448030 Zm00025ab448030_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00025ab448030 Zm00025ab448030_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P003 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00025ab448090 Zm00025ab448090_P004 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P002 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P003 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00025ab448110 Zm00025ab448110_P003 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P003 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00025ab448110 Zm00025ab448110_P003 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00025ab448290 Zm00025ab448290_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab448470 Zm00025ab448470_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab448470 Zm00025ab448470_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab448470 Zm00025ab448470_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab448470 Zm00025ab448470_P004 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00025ab448500 Zm00025ab448500_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab448570 Zm00025ab448570_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab448630 Zm00025ab448630_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab448670 Zm00025ab448670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab448670 Zm00025ab448670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab448670 Zm00025ab448670_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P002 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P003 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P003 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P004 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448760 Zm00025ab448760_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00025ab448770 Zm00025ab448770_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00025ab448770 Zm00025ab448770_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448770 Zm00025ab448770_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448770 Zm00025ab448770_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448770 Zm00025ab448770_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448770 Zm00025ab448770_P002 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448780 Zm00025ab448780_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448780 Zm00025ab448780_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00025ab448780 Zm00025ab448780_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00025ab448780 Zm00025ab448780_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab448960 Zm00025ab448960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00025ab448960 Zm00025ab448960_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00025ab449010 Zm00025ab449010_P001 expected PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P006 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00025ab449080 Zm00025ab449080_P007 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab449140 Zm00025ab449140_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab449140 Zm00025ab449140_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab449170 Zm00025ab449170_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00025ab449170 Zm00025ab449170_P002 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab449320 Zm00025ab449320_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab449320 Zm00025ab449320_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00025ab449320 Zm00025ab449320_P003 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab449350 Zm00025ab449350_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00025ab449350 Zm00025ab449350_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00025ab449350 Zm00025ab449350_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00025ab449350 Zm00025ab449350_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab449600 Zm00025ab449600_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00025ab449720 Zm00025ab449720_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab449740 Zm00025ab449740_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab449740 Zm00025ab449740_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00025ab449740 Zm00025ab449740_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00025ab449840 Zm00025ab449840_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab449870 Zm00025ab449870_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab449880 Zm00025ab449880_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00025ab450110 Zm00025ab450110_P001 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00025ab450220 Zm00025ab450220_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00025ab450220 Zm00025ab450220_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P002 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P003 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P003 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P003 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P004 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P004 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P004 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P004 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P005 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P005 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P005 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P005 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P005 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P006 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P006 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P006 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P006 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P006 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P007 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P007 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P007 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P007 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00025ab450240 Zm00025ab450240_P007 expected PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00025ab450250 Zm00025ab450250_P001 viridiplantae PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab450410 Zm00025ab450410_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00025ab450410 Zm00025ab450410_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P003 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P004 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P004 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00025ab450550 Zm00025ab450550_P004 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00025ab450610 Zm00025ab450610_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab450660 Zm00025ab450660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab450660 Zm00025ab450660_P002 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00025ab450670 Zm00025ab450670_P001 conditional PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00025ab450700 Zm00025ab450700_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00025ab450700 Zm00025ab450700_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00025ab450700 Zm00025ab450700_P003 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab450760 Zm00025ab450760_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00025ab450760 Zm00025ab450760_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00025ab450790 Zm00025ab450790_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab450810 Zm00025ab450810_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00025ab450810 Zm00025ab450810_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab450870 Zm00025ab450870_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab450870 Zm00025ab450870_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00025ab450970 Zm00025ab450970_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab451010 Zm00025ab451010_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab451010 Zm00025ab451010_P002 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROTATE-DEHYDROGENASE-RXN EC-1.3.5.2 Zm00025ab451040 Zm00025ab451040_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00025ab451110 Zm00025ab451110_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00025ab451220 Zm00025ab451220_P001 conditional PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00025ab451250 Zm00025ab451250_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00025ab451250 Zm00025ab451250_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00025ab451390 Zm00025ab451390_P001 NA PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00025ab451560 Zm00025ab451560_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00025ab451560 Zm00025ab451560_P002 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00025ab451560 Zm00025ab451560_P003 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00025ab451560 Zm00025ab451560_P004 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00025ab451730 Zm00025ab451730_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab451770 Zm00025ab451770_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab451890 Zm00025ab451890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab451890 Zm00025ab451890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab451890 Zm00025ab451890_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00025ab451900 Zm00025ab451900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab451900 Zm00025ab451900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00025ab451900 Zm00025ab451900_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis GMP-SYN-GLUT-RXN EC-6.3.5.2 Zm00025ab451920 Zm00025ab451920_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00025ab452110 Zm00025ab452110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab452620 Zm00025ab452620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab452710 Zm00025ab452710_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab452730 Zm00025ab452730_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab452730 Zm00025ab452730_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab452740 Zm00025ab452740_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab452740 Zm00025ab452740_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab453040 Zm00025ab453040_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab453060 Zm00025ab453060_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab453060 Zm00025ab453060_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab453120 Zm00025ab453120_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab453130 Zm00025ab453130_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab453150 Zm00025ab453150_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab453210 Zm00025ab453210_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab453230 Zm00025ab453230_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab453320 Zm00025ab453320_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab453350 Zm00025ab453350_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab453350 Zm00025ab453350_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab453410 Zm00025ab453410_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00025ab453430 Zm00025ab453430_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab453920 Zm00025ab453920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab453960 Zm00025ab453960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab454040 Zm00025ab454040_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab454150 Zm00025ab454150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab454210 Zm00025ab454210_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00025ab454300 Zm00025ab454300_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454530 Zm00025ab454530_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454530 Zm00025ab454530_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454540 Zm00025ab454540_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454540 Zm00025ab454540_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab454570 Zm00025ab454570_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab454620 Zm00025ab454620_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab454640 Zm00025ab454640_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab454930 Zm00025ab454930_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454960 Zm00025ab454960_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab454960 Zm00025ab454960_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab455020 Zm00025ab455020_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab455030 Zm00025ab455030_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455080 Zm00025ab455080_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455090 Zm00025ab455090_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455100 Zm00025ab455100_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455110 Zm00025ab455110_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455120 Zm00025ab455120_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455150 Zm00025ab455150_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455450 Zm00025ab455450_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab455470 Zm00025ab455470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab455650 Zm00025ab455650_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455670 Zm00025ab455670_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455670 Zm00025ab455670_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455680 Zm00025ab455680_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455680 Zm00025ab455680_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab455760 Zm00025ab455760_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab455830 Zm00025ab455830_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455890 Zm00025ab455890_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab455890 Zm00025ab455890_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab456030 Zm00025ab456030_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456270 Zm00025ab456270_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456280 Zm00025ab456280_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab456300 Zm00025ab456300_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab456300 Zm00025ab456300_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab456340 Zm00025ab456340_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00025ab456390 Zm00025ab456390_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab456430 Zm00025ab456430_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab456430 Zm00025ab456430_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab456510 Zm00025ab456510_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456580 Zm00025ab456580_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456590 Zm00025ab456590_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456640 Zm00025ab456640_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab456650 Zm00025ab456650_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457060 Zm00025ab457060_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457060 Zm00025ab457060_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457190 Zm00025ab457190_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457190 Zm00025ab457190_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457480 Zm00025ab457480_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab457480 Zm00025ab457480_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab457630 Zm00025ab457630_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab457670 Zm00025ab457670_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00025ab457680 Zm00025ab457680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab458110 Zm00025ab458110_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00025ab458350 Zm00025ab458350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00025ab458450 Zm00025ab458450_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00025ab458570 Zm00025ab458570_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab458670 Zm00025ab458670_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab458670 Zm00025ab458670_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab458680 Zm00025ab458680_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00025ab458680 Zm00025ab458680_P001 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00025ab458720 Zm00025ab458720_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00025ab458820 Zm00025ab458820_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00025ab458830 Zm00025ab458830_P001 expected