Pathway ID Description Reaction ID EC number Gene Model ID Protein ID Evidence PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab000040 Zm00028ab000040_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab000070 Zm00028ab000070_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab000200 Zm00028ab000200_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab000450 Zm00028ab000450_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab000690 Zm00028ab000690_P001 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab000700 Zm00028ab000700_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab000700 Zm00028ab000700_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab000790 Zm00028ab000790_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab000790 Zm00028ab000790_P002 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab000790 Zm00028ab000790_P003 viridiplantae PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00028ab001080 Zm00028ab001080_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00028ab001080 Zm00028ab001080_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab001120 Zm00028ab001120_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00028ab001170 Zm00028ab001170_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00028ab001170 Zm00028ab001170_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab001180 Zm00028ab001180_P003 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab001260 Zm00028ab001260_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab001260 Zm00028ab001260_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001290 Zm00028ab001290_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P006 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab001310 Zm00028ab001310_P007 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab001420 Zm00028ab001420_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab001420 Zm00028ab001420_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab001420 Zm00028ab001420_P003 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab001420 Zm00028ab001420_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab001450 Zm00028ab001450_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab001450 Zm00028ab001450_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab001450 Zm00028ab001450_P001 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab001500 Zm00028ab001500_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab001640 Zm00028ab001640_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab001640 Zm00028ab001640_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab001640 Zm00028ab001640_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab001760 Zm00028ab001760_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab001760 Zm00028ab001760_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab001760 Zm00028ab001760_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab001760 Zm00028ab001760_P001 conditional PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab001790 Zm00028ab001790_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab001950 Zm00028ab001950_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab002250 Zm00028ab002250_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab002250 Zm00028ab002250_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab002250 Zm00028ab002250_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab002250 Zm00028ab002250_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab002330 Zm00028ab002330_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab002330 Zm00028ab002330_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab002390 Zm00028ab002390_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab002390 Zm00028ab002390_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab002390 Zm00028ab002390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab002390 Zm00028ab002390_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab002390 Zm00028ab002390_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab002400 Zm00028ab002400_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab002480 Zm00028ab002480_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab002530 Zm00028ab002530_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab002530 Zm00028ab002530_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab002530 Zm00028ab002530_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab002570 Zm00028ab002570_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab002570 Zm00028ab002570_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab002800 Zm00028ab002800_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab002800 Zm00028ab002800_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab002800 Zm00028ab002800_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab002800 Zm00028ab002800_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab002860 Zm00028ab002860_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab002860 Zm00028ab002860_P002 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab002950 Zm00028ab002950_P004 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab002970 Zm00028ab002970_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab002970 Zm00028ab002970_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab002970 Zm00028ab002970_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab002980 Zm00028ab002980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab002980 Zm00028ab002980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab002980 Zm00028ab002980_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab002990 Zm00028ab002990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab002990 Zm00028ab002990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab002990 Zm00028ab002990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab003000 Zm00028ab003000_P002 conditional PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00028ab003060 Zm00028ab003060_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00028ab003060 Zm00028ab003060_P002 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab003090 Zm00028ab003090_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab003120 Zm00028ab003120_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab003150 Zm00028ab003150_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab003150 Zm00028ab003150_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab003150 Zm00028ab003150_P001 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab003340 Zm00028ab003340_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab003340 Zm00028ab003340_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab003340 Zm00028ab003340_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab003340 Zm00028ab003340_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab003510 Zm00028ab003510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab003520 Zm00028ab003520_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab003530 Zm00028ab003530_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab003580 Zm00028ab003580_P005 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab004150 Zm00028ab004150_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab004150 Zm00028ab004150_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab004150 Zm00028ab004150_P003 expected THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab004160 Zm00028ab004160_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab004290 Zm00028ab004290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab004290 Zm00028ab004290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab004290 Zm00028ab004290_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab004300 Zm00028ab004300_P002 NA SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00028ab004450 Zm00028ab004450_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00028ab004450 Zm00028ab004450_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab004670 Zm00028ab004670_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab004720 Zm00028ab004720_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab004720 Zm00028ab004720_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab004720 Zm00028ab004720_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab004720 Zm00028ab004720_P004 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab004740 Zm00028ab004740_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab004760 Zm00028ab004760_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab004760 Zm00028ab004760_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab004820 Zm00028ab004820_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab004820 Zm00028ab004820_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab004820 Zm00028ab004820_P001 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab004870 Zm00028ab004870_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab004870 Zm00028ab004870_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab004870 Zm00028ab004870_P003 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab004870 Zm00028ab004870_P004 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab004870 Zm00028ab004870_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab004940 Zm00028ab004940_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab005140 Zm00028ab005140_P002 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P004 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab005200 Zm00028ab005200_P004 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab005250 Zm00028ab005250_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab005450 Zm00028ab005450_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab005470 Zm00028ab005470_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab005500 Zm00028ab005500_P001 viridiplantae VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00028ab005550 Zm00028ab005550_P001 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P001 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P002 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P002 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P003 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P003 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P004 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P004 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P005 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab005580 Zm00028ab005580_P005 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab005630 Zm00028ab005630_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab005630 Zm00028ab005630_P002 conditional GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab005730 Zm00028ab005730_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab005730 Zm00028ab005730_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00028ab005860 Zm00028ab005860_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00028ab005920 Zm00028ab005920_P003 ubiquitous PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab006010 Zm00028ab006010_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab006010 Zm00028ab006010_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab006010 Zm00028ab006010_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab006010 Zm00028ab006010_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab006010 Zm00028ab006010_P005 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab006110 Zm00028ab006110_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab006180 Zm00028ab006180_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab006270 Zm00028ab006270_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab006270 Zm00028ab006270_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab006270 Zm00028ab006270_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab006490 Zm00028ab006490_P002 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006570 Zm00028ab006570_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006570 Zm00028ab006570_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006580 Zm00028ab006580_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006580 Zm00028ab006580_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006610 Zm00028ab006610_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab006610 Zm00028ab006610_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00028ab006620 Zm00028ab006620_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00028ab006620 Zm00028ab006620_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00028ab006620 Zm00028ab006620_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006700 Zm00028ab006700_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006700 Zm00028ab006700_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006700 Zm00028ab006700_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006700 Zm00028ab006700_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006700 Zm00028ab006700_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006710 Zm00028ab006710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006710 Zm00028ab006710_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006710 Zm00028ab006710_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006710 Zm00028ab006710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab006710 Zm00028ab006710_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab006850 Zm00028ab006850_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab006850 Zm00028ab006850_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab006850 Zm00028ab006850_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab006850 Zm00028ab006850_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab006850 Zm00028ab006850_P001 NA PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007030 Zm00028ab007030_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab007040 Zm00028ab007040_P002 conditional PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00028ab007080 Zm00028ab007080_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00028ab007080 Zm00028ab007080_P002 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00028ab007080 Zm00028ab007080_P003 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00028ab007080 Zm00028ab007080_P004 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00028ab007080 Zm00028ab007080_P005 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab007450 Zm00028ab007450_P004 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab008000 Zm00028ab008000_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab008120 Zm00028ab008120_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab008120 Zm00028ab008120_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab008400 Zm00028ab008400_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab008400 Zm00028ab008400_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00028ab008470 Zm00028ab008470_P001 viridiplantae PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab008550 Zm00028ab008550_P001 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab008550 Zm00028ab008550_P002 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab008550 Zm00028ab008550_P003 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab008550 Zm00028ab008550_P004 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab008600 Zm00028ab008600_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab008600 Zm00028ab008600_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab008690 Zm00028ab008690_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab008690 Zm00028ab008690_P002 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab008780 Zm00028ab008780_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab008780 Zm00028ab008780_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab008780 Zm00028ab008780_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab008780 Zm00028ab008780_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab008780 Zm00028ab008780_P005 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab008900 Zm00028ab008900_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab008900 Zm00028ab008900_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00028ab009000 Zm00028ab009000_P001 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00028ab009000 Zm00028ab009000_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P003 expected HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00028ab009000 Zm00028ab009000_P004 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00028ab009000 Zm00028ab009000_P004 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab009000 Zm00028ab009000_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab009140 Zm00028ab009140_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab009140 Zm00028ab009140_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab009140 Zm00028ab009140_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab009140 Zm00028ab009140_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab009170 Zm00028ab009170_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab009170 Zm00028ab009170_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab009250 Zm00028ab009250_P002 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab009300 Zm00028ab009300_P001 ubiquitous PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab009320 Zm00028ab009320_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab009320 Zm00028ab009320_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab009320 Zm00028ab009320_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab009320 Zm00028ab009320_P001 viridiplantae PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab009340 Zm00028ab009340_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab009340 Zm00028ab009340_P002 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab009390 Zm00028ab009390_P002 NA NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00028ab009450 Zm00028ab009450_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00028ab009450 Zm00028ab009450_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00028ab009450 Zm00028ab009450_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00028ab009450 Zm00028ab009450_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab009490 Zm00028ab009490_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab009490 Zm00028ab009490_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab009490 Zm00028ab009490_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab009490 Zm00028ab009490_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab009490 Zm00028ab009490_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab009490 Zm00028ab009490_P003 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab009560 Zm00028ab009560_P001 expected PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab009590 Zm00028ab009590_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab009590 Zm00028ab009590_P001 conditional PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab009720 Zm00028ab009720_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab009720 Zm00028ab009720_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab009760 Zm00028ab009760_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010100 Zm00028ab010100_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010100 Zm00028ab010100_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010100 Zm00028ab010100_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010110 Zm00028ab010110_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab010120 Zm00028ab010120_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010120 Zm00028ab010120_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab010120 Zm00028ab010120_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab010230 Zm00028ab010230_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab010230 Zm00028ab010230_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab010230 Zm00028ab010230_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab010230 Zm00028ab010230_P004 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab010320 Zm00028ab010320_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab010320 Zm00028ab010320_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab010330 Zm00028ab010330_P003 viridiplantae PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00028ab010430 Zm00028ab010430_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab010510 Zm00028ab010510_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab010580 Zm00028ab010580_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab010580 Zm00028ab010580_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab010580 Zm00028ab010580_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab010690 Zm00028ab010690_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab010690 Zm00028ab010690_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab010690 Zm00028ab010690_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab010760 Zm00028ab010760_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab010760 Zm00028ab010760_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab010760 Zm00028ab010760_P001 manual PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab010830 Zm00028ab010830_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab010900 Zm00028ab010900_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab011010 Zm00028ab011010_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab011010 Zm00028ab011010_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab011010 Zm00028ab011010_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab011020 Zm00028ab011020_P001 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab011040 Zm00028ab011040_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab011040 Zm00028ab011040_P002 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab011040 Zm00028ab011040_P003 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab011040 Zm00028ab011040_P004 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab011040 Zm00028ab011040_P005 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab011110 Zm00028ab011110_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011110 Zm00028ab011110_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab011110 Zm00028ab011110_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011110 Zm00028ab011110_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab011130 Zm00028ab011130_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab011130 Zm00028ab011130_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab011130 Zm00028ab011130_P003 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab011190 Zm00028ab011190_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab011190 Zm00028ab011190_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab011190 Zm00028ab011190_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P003 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab011190 Zm00028ab011190_P004 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab011190 Zm00028ab011190_P004 manual PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab011220 Zm00028ab011220_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab011220 Zm00028ab011220_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab011220 Zm00028ab011220_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab011510 Zm00028ab011510_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab011540 Zm00028ab011540_P004 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab011590 Zm00028ab011590_P003 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab011830 Zm00028ab011830_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012030 Zm00028ab012030_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab012050 Zm00028ab012050_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab012110 Zm00028ab012110_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab012210 Zm00028ab012210_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab012210 Zm00028ab012210_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab012210 Zm00028ab012210_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab012210 Zm00028ab012210_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab012220 Zm00028ab012220_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab012360 Zm00028ab012360_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab012460 Zm00028ab012460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab012460 Zm00028ab012460_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab012500 Zm00028ab012500_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab012500 Zm00028ab012500_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab012560 Zm00028ab012560_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab012820 Zm00028ab012820_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab012820 Zm00028ab012820_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab012830 Zm00028ab012830_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab012830 Zm00028ab012830_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab012830 Zm00028ab012830_P003 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab012900 Zm00028ab012900_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab012900 Zm00028ab012900_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) GLUTAMATE-N-ACETYLTRANSFERASE-RXN EC-2.3.1.35 Zm00028ab012900 Zm00028ab012900_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab012900 Zm00028ab012900_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab012900 Zm00028ab012900_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) GLUTAMATE-N-ACETYLTRANSFERASE-RXN EC-2.3.1.35 Zm00028ab012900 Zm00028ab012900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab013200 Zm00028ab013200_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab013200 Zm00028ab013200_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab013210 Zm00028ab013210_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab013210 Zm00028ab013210_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab013210 Zm00028ab013210_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab013210 Zm00028ab013210_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab013210 Zm00028ab013210_P005 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab013330 Zm00028ab013330_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab013330 Zm00028ab013330_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab013360 Zm00028ab013360_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab013360 Zm00028ab013360_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab013360 Zm00028ab013360_P003 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab013360 Zm00028ab013360_P004 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab013430 Zm00028ab013430_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab013430 Zm00028ab013430_P002 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab013490 Zm00028ab013490_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab013490 Zm00028ab013490_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab013600 Zm00028ab013600_P001 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P002 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P003 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P003 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P003 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P003 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P004 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P004 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P004 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab013660 Zm00028ab013660_P004 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P005 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P005 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P005 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab013690 Zm00028ab013690_P005 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab013730 Zm00028ab013730_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab013730 Zm00028ab013730_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P003 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P004 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab013830 Zm00028ab013830_P004 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00028ab013850 Zm00028ab013850_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00028ab013850 Zm00028ab013850_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00028ab013850 Zm00028ab013850_P002 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00028ab013850 Zm00028ab013850_P002 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab014130 Zm00028ab014130_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab014130 Zm00028ab014130_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab014240 Zm00028ab014240_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00028ab014310 Zm00028ab014310_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00028ab014310 Zm00028ab014310_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00028ab014310 Zm00028ab014310_P003 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab014320 Zm00028ab014320_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab014330 Zm00028ab014330_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab014330 Zm00028ab014330_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab014330 Zm00028ab014330_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab014330 Zm00028ab014330_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab014330 Zm00028ab014330_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab014330 Zm00028ab014330_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab014330 Zm00028ab014330_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab014330 Zm00028ab014330_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab014470 Zm00028ab014470_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab014470 Zm00028ab014470_P002 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab014480 Zm00028ab014480_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab014480 Zm00028ab014480_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab014480 Zm00028ab014480_P003 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab014750 Zm00028ab014750_P003 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab014800 Zm00028ab014800_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab014920 Zm00028ab014920_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab014920 Zm00028ab014920_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab014940 Zm00028ab014940_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab014940 Zm00028ab014940_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab014960 Zm00028ab014960_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab014960 Zm00028ab014960_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab014960 Zm00028ab014960_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab014960 Zm00028ab014960_P004 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab015270 Zm00028ab015270_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab015270 Zm00028ab015270_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab015270 Zm00028ab015270_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab015270 Zm00028ab015270_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab015320 Zm00028ab015320_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab015320 Zm00028ab015320_P002 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00028ab015340 Zm00028ab015340_P001 expected PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab015350 Zm00028ab015350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab015370 Zm00028ab015370_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab015380 Zm00028ab015380_P001 NA PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab015580 Zm00028ab015580_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab015580 Zm00028ab015580_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab015580 Zm00028ab015580_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab015860 Zm00028ab015860_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P004 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab016110 Zm00028ab016110_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab016150 Zm00028ab016150_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab016150 Zm00028ab016150_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab016150 Zm00028ab016150_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab016170 Zm00028ab016170_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab016170 Zm00028ab016170_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab016170 Zm00028ab016170_P003 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab016180 Zm00028ab016180_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab016200 Zm00028ab016200_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab016210 Zm00028ab016210_P001 expected PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab016280 Zm00028ab016280_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab016280 Zm00028ab016280_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab016290 Zm00028ab016290_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab016290 Zm00028ab016290_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab016550 Zm00028ab016550_P004 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab016640 Zm00028ab016640_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab016640 Zm00028ab016640_P002 expected PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab016740 Zm00028ab016740_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab016930 Zm00028ab016930_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab017110 Zm00028ab017110_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab017110 Zm00028ab017110_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab017110 Zm00028ab017110_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab017110 Zm00028ab017110_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab017120 Zm00028ab017120_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab017160 Zm00028ab017160_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab017160 Zm00028ab017160_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab017160 Zm00028ab017160_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab017210 Zm00028ab017210_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab017210 Zm00028ab017210_P001 conditional PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00028ab017230 Zm00028ab017230_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00028ab017230 Zm00028ab017230_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab017240 Zm00028ab017240_P004 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab017260 Zm00028ab017260_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab017260 Zm00028ab017260_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab017300 Zm00028ab017300_P003 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab017340 Zm00028ab017340_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab017450 Zm00028ab017450_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab017450 Zm00028ab017450_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab017450 Zm00028ab017450_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab017500 Zm00028ab017500_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab017500 Zm00028ab017500_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab017500 Zm00028ab017500_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab017500 Zm00028ab017500_P002 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00028ab017530 Zm00028ab017530_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab017540 Zm00028ab017540_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017660 Zm00028ab017660_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017670 Zm00028ab017670_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017670 Zm00028ab017670_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017670 Zm00028ab017670_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab017670 Zm00028ab017670_P002 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab017840 Zm00028ab017840_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab017840 Zm00028ab017840_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab017840 Zm00028ab017840_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab017840 Zm00028ab017840_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab017870 Zm00028ab017870_P006 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab017880 Zm00028ab017880_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab018220 Zm00028ab018220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018220 Zm00028ab018220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018220 Zm00028ab018220_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab018230 Zm00028ab018230_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018230 Zm00028ab018230_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018230 Zm00028ab018230_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab018250 Zm00028ab018250_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab018270 Zm00028ab018270_P001 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab018450 Zm00028ab018450_P001 viridiplantae PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P005 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab018550 Zm00028ab018550_P005 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab018610 Zm00028ab018610_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab018610 Zm00028ab018610_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00028ab018610 Zm00028ab018610_P002 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab018610 Zm00028ab018610_P003 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab018610 Zm00028ab018610_P003 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab018710 Zm00028ab018710_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab018710 Zm00028ab018710_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab018760 Zm00028ab018760_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab018760 Zm00028ab018760_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab018760 Zm00028ab018760_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab018880 Zm00028ab018880_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab018880 Zm00028ab018880_P002 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab019020 Zm00028ab019020_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab019080 Zm00028ab019080_P009 ubiquitous GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab019090 Zm00028ab019090_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab019090 Zm00028ab019090_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab019090 Zm00028ab019090_P001 manual PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab019210 Zm00028ab019210_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab019220 Zm00028ab019220_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab019220 Zm00028ab019220_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab019220 Zm00028ab019220_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab019340 Zm00028ab019340_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab019430 Zm00028ab019430_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab019430 Zm00028ab019430_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab019430 Zm00028ab019430_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RXN-9276 EC-1.3.1.107 Zm00028ab019760 Zm00028ab019760_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab019880 Zm00028ab019880_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab019880 Zm00028ab019880_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab019880 Zm00028ab019880_P003 viridiplantae PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00028ab019940 Zm00028ab019940_P001 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab019980 Zm00028ab019980_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab020040 Zm00028ab020040_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab020040 Zm00028ab020040_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab020040 Zm00028ab020040_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab020040 Zm00028ab020040_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab020040 Zm00028ab020040_P005 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P004 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P005 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P006 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab020230 Zm00028ab020230_P007 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020290 Zm00028ab020290_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020290 Zm00028ab020290_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020290 Zm00028ab020290_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020290 Zm00028ab020290_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020290 Zm00028ab020290_P005 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab020420 Zm00028ab020420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab020420 Zm00028ab020420_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab020420 Zm00028ab020420_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab020420 Zm00028ab020420_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab020420 Zm00028ab020420_P005 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab020750 Zm00028ab020750_P001 conditional PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00028ab020760 Zm00028ab020760_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab020840 Zm00028ab020840_P002 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P001 ubiquitous PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P002 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P002 ubiquitous PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P003 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab021030 Zm00028ab021030_P003 ubiquitous PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab021200 Zm00028ab021200_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab021200 Zm00028ab021200_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab021200 Zm00028ab021200_P001 conditional PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00028ab021240 Zm00028ab021240_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00028ab021240 Zm00028ab021240_P001 NA PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00028ab021240 Zm00028ab021240_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00028ab021240 Zm00028ab021240_P002 NA PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00028ab021260 Zm00028ab021260_P001 expected PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00028ab021260 Zm00028ab021260_P002 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab021460 Zm00028ab021460_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021490 Zm00028ab021490_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021490 Zm00028ab021490_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021490 Zm00028ab021490_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021530 Zm00028ab021530_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021530 Zm00028ab021530_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021530 Zm00028ab021530_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021540 Zm00028ab021540_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021550 Zm00028ab021550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021550 Zm00028ab021550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021550 Zm00028ab021550_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021560 Zm00028ab021560_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021560 Zm00028ab021560_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021560 Zm00028ab021560_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021570 Zm00028ab021570_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021570 Zm00028ab021570_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021570 Zm00028ab021570_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021580 Zm00028ab021580_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021580 Zm00028ab021580_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021580 Zm00028ab021580_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021590 Zm00028ab021590_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021600 Zm00028ab021600_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021640 Zm00028ab021640_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab021650 Zm00028ab021650_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab021650 Zm00028ab021650_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab021650 Zm00028ab021650_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab021670 Zm00028ab021670_P001 expected PWY-7861 L-pipecolate biosynthesis RXN-8166 EC-1.5.1.1 Zm00028ab021770 Zm00028ab021770_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab021920 Zm00028ab021920_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab021920 Zm00028ab021920_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab021920 Zm00028ab021920_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab021920 Zm00028ab021920_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab021940 Zm00028ab021940_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab021940 Zm00028ab021940_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab021950 Zm00028ab021950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab021950 Zm00028ab021950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab021950 Zm00028ab021950_P001 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab021960 Zm00028ab021960_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab021960 Zm00028ab021960_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab021960 Zm00028ab021960_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab022170 Zm00028ab022170_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab022440 Zm00028ab022440_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab022440 Zm00028ab022440_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab022440 Zm00028ab022440_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab022450 Zm00028ab022450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab022450 Zm00028ab022450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab022450 Zm00028ab022450_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab022470 Zm00028ab022470_P002 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab022610 Zm00028ab022610_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab022830 Zm00028ab022830_P004 conditional VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab022890 Zm00028ab022890_P003 viridiplantae PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P002 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P003 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab022950 Zm00028ab022950_P003 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab023020 Zm00028ab023020_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab023020 Zm00028ab023020_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab023020 Zm00028ab023020_P003 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P003 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab023050 Zm00028ab023050_P006 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab023470 Zm00028ab023470_P002 conditional PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00028ab023570 Zm00028ab023570_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab023670 Zm00028ab023670_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab023730 Zm00028ab023730_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab023730 Zm00028ab023730_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab023780 Zm00028ab023780_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab023870 Zm00028ab023870_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab023870 Zm00028ab023870_P001 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab023900 Zm00028ab023900_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab023900 Zm00028ab023900_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab023970 Zm00028ab023970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab023970 Zm00028ab023970_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab023980 Zm00028ab023980_P002 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab024160 Zm00028ab024160_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab024160 Zm00028ab024160_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab024160 Zm00028ab024160_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab024160 Zm00028ab024160_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab024390 Zm00028ab024390_P001 ubiquitous PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab024590 Zm00028ab024590_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab024590 Zm00028ab024590_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab024590 Zm00028ab024590_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab024660 Zm00028ab024660_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab024660 Zm00028ab024660_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P004 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P005 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P005 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P005 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P005 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P006 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P006 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P006 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab024840 Zm00028ab024840_P006 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab024860 Zm00028ab024860_P001 expected PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab024960 Zm00028ab024960_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab024960 Zm00028ab024960_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab024960 Zm00028ab024960_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab025020 Zm00028ab025020_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00028ab025040 Zm00028ab025040_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab025150 Zm00028ab025150_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab025210 Zm00028ab025210_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab025210 Zm00028ab025210_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab025210 Zm00028ab025210_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab025210 Zm00028ab025210_P005 ubiquitous PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab025260 Zm00028ab025260_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab025260 Zm00028ab025260_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab025260 Zm00028ab025260_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab025260 Zm00028ab025260_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab025400 Zm00028ab025400_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab025400 Zm00028ab025400_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab025400 Zm00028ab025400_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab025400 Zm00028ab025400_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab025570 Zm00028ab025570_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab025570 Zm00028ab025570_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab025570 Zm00028ab025570_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab025570 Zm00028ab025570_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab025580 Zm00028ab025580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab025580 Zm00028ab025580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab025580 Zm00028ab025580_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P002 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P003 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P003 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab025630 Zm00028ab025630_P003 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00028ab025690 Zm00028ab025690_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00028ab025690 Zm00028ab025690_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab025720 Zm00028ab025720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab025720 Zm00028ab025720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab025720 Zm00028ab025720_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab025880 Zm00028ab025880_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab025880 Zm00028ab025880_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab026010 Zm00028ab026010_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab026010 Zm00028ab026010_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab026010 Zm00028ab026010_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab026050 Zm00028ab026050_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab026050 Zm00028ab026050_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab026050 Zm00028ab026050_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab026140 Zm00028ab026140_P001 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab026210 Zm00028ab026210_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab026210 Zm00028ab026210_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab026220 Zm00028ab026220_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab026220 Zm00028ab026220_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab026290 Zm00028ab026290_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab026380 Zm00028ab026380_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab026900 Zm00028ab026900_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab026980 Zm00028ab026980_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027060 Zm00028ab027060_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab027070 Zm00028ab027070_P002 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab027260 Zm00028ab027260_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab027290 Zm00028ab027290_P001 conditional PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab027410 Zm00028ab027410_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab027410 Zm00028ab027410_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab027410 Zm00028ab027410_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab027410 Zm00028ab027410_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab027410 Zm00028ab027410_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab027410 Zm00028ab027410_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab027410 Zm00028ab027410_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab027410 Zm00028ab027410_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab027530 Zm00028ab027530_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab027530 Zm00028ab027530_P001 expected PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab027780 Zm00028ab027780_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab027780 Zm00028ab027780_P001 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab027820 Zm00028ab027820_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab027850 Zm00028ab027850_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab027990 Zm00028ab027990_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab027990 Zm00028ab027990_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab028090 Zm00028ab028090_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab028090 Zm00028ab028090_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab028090 Zm00028ab028090_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab028090 Zm00028ab028090_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab028210 Zm00028ab028210_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00028ab028290 Zm00028ab028290_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00028ab028290 Zm00028ab028290_P001 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00028ab028290 Zm00028ab028290_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00028ab028340 Zm00028ab028340_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00028ab028340 Zm00028ab028340_P001 conditional PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00028ab028370 Zm00028ab028370_P001 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00028ab028370 Zm00028ab028370_P001 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab028480 Zm00028ab028480_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab028810 Zm00028ab028810_P001 ubiquitous PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab028910 Zm00028ab028910_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab028910 Zm00028ab028910_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab028910 Zm00028ab028910_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab029030 Zm00028ab029030_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab029140 Zm00028ab029140_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab029140 Zm00028ab029140_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab029140 Zm00028ab029140_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab029140 Zm00028ab029140_P004 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab029140 Zm00028ab029140_P005 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab029170 Zm00028ab029170_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab029370 Zm00028ab029370_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab029370 Zm00028ab029370_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab029370 Zm00028ab029370_P003 ubiquitous PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab029400 Zm00028ab029400_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab029400 Zm00028ab029400_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab029400 Zm00028ab029400_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab029400 Zm00028ab029400_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab029400 Zm00028ab029400_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab029570 Zm00028ab029570_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab029590 Zm00028ab029590_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab029590 Zm00028ab029590_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab029590 Zm00028ab029590_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab029620 Zm00028ab029620_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab029620 Zm00028ab029620_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab029730 Zm00028ab029730_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab029730 Zm00028ab029730_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab029850 Zm00028ab029850_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab029850 Zm00028ab029850_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab029850 Zm00028ab029850_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab030000 Zm00028ab030000_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab030000 Zm00028ab030000_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab030000 Zm00028ab030000_P003 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab030050 Zm00028ab030050_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab030050 Zm00028ab030050_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab030050 Zm00028ab030050_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab030070 Zm00028ab030070_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab030090 Zm00028ab030090_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab030090 Zm00028ab030090_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab030280 Zm00028ab030280_P001 expected PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00028ab030440 Zm00028ab030440_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00028ab030440 Zm00028ab030440_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00028ab030490 Zm00028ab030490_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00028ab030490 Zm00028ab030490_P001 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P003 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P004 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P004 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P004 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab030810 Zm00028ab030810_P004 excluded MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5464 EC-2.4.1.131 Zm00028ab030860 Zm00028ab030860_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab030920 Zm00028ab030920_P004 ubiquitous GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab030970 Zm00028ab030970_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab030970 Zm00028ab030970_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab030970 Zm00028ab030970_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab030970 Zm00028ab030970_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab030970 Zm00028ab030970_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab031040 Zm00028ab031040_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab031040 Zm00028ab031040_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab031070 Zm00028ab031070_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab031080 Zm00028ab031080_P001 viridiplantae PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00028ab031350 Zm00028ab031350_P001 conditional NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00028ab031390 Zm00028ab031390_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00028ab031390 Zm00028ab031390_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00028ab031390 Zm00028ab031390_P003 expected PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00028ab031520 Zm00028ab031520_P001 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00028ab031520 Zm00028ab031520_P002 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00028ab031520 Zm00028ab031520_P003 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab031610 Zm00028ab031610_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab031610 Zm00028ab031610_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab031620 Zm00028ab031620_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab031620 Zm00028ab031620_P001 ubiquitous LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab031900 Zm00028ab031900_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab031900 Zm00028ab031900_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab031900 Zm00028ab031900_P003 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab031950 Zm00028ab031950_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab031950 Zm00028ab031950_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab031950 Zm00028ab031950_P003 ubiquitous PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab032000 Zm00028ab032000_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab032000 Zm00028ab032000_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab032000 Zm00028ab032000_P003 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab032100 Zm00028ab032100_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab032100 Zm00028ab032100_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab032240 Zm00028ab032240_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab032240 Zm00028ab032240_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab032240 Zm00028ab032240_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab032240 Zm00028ab032240_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab032410 Zm00028ab032410_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab032410 Zm00028ab032410_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00028ab032450 Zm00028ab032450_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab032520 Zm00028ab032520_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab032520 Zm00028ab032520_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00028ab032520 Zm00028ab032520_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab032560 Zm00028ab032560_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab032610 Zm00028ab032610_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab032890 Zm00028ab032890_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab032920 Zm00028ab032920_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab032970 Zm00028ab032970_P004 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab032980 Zm00028ab032980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab032980 Zm00028ab032980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab032980 Zm00028ab032980_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab033010 Zm00028ab033010_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab033020 Zm00028ab033020_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab033030 Zm00028ab033030_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab033090 Zm00028ab033090_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab033090 Zm00028ab033090_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab033090 Zm00028ab033090_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab033090 Zm00028ab033090_P004 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab033130 Zm00028ab033130_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab033410 Zm00028ab033410_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab033410 Zm00028ab033410_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab033410 Zm00028ab033410_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab033490 Zm00028ab033490_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab033490 Zm00028ab033490_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab033490 Zm00028ab033490_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab033600 Zm00028ab033600_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab033600 Zm00028ab033600_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab033610 Zm00028ab033610_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab033650 Zm00028ab033650_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab033740 Zm00028ab033740_P004 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab033910 Zm00028ab033910_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab033910 Zm00028ab033910_P001 expected RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab034050 Zm00028ab034050_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab034230 Zm00028ab034230_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab034230 Zm00028ab034230_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab034230 Zm00028ab034230_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab034230 Zm00028ab034230_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab034440 Zm00028ab034440_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab034660 Zm00028ab034660_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab034990 Zm00028ab034990_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P001 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00028ab034990 Zm00028ab034990_P001 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab034990 Zm00028ab034990_P002 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P002 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P002 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00028ab034990 Zm00028ab034990_P002 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab034990 Zm00028ab034990_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab034990 Zm00028ab034990_P003 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P003 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00028ab034990 Zm00028ab034990_P003 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00028ab034990 Zm00028ab034990_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab035070 Zm00028ab035070_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab035070 Zm00028ab035070_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab035070 Zm00028ab035070_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab035150 Zm00028ab035150_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab035150 Zm00028ab035150_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab035150 Zm00028ab035150_P003 conditional PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00028ab035320 Zm00028ab035320_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab035510 Zm00028ab035510_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab035510 Zm00028ab035510_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab035510 Zm00028ab035510_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab035540 Zm00028ab035540_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab035540 Zm00028ab035540_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab035540 Zm00028ab035540_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab035700 Zm00028ab035700_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab035780 Zm00028ab035780_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab035780 Zm00028ab035780_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab035870 Zm00028ab035870_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab035870 Zm00028ab035870_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab035870 Zm00028ab035870_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab035870 Zm00028ab035870_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab035870 Zm00028ab035870_P005 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab035960 Zm00028ab035960_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab035960 Zm00028ab035960_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab036340 Zm00028ab036340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab036340 Zm00028ab036340_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab036500 Zm00028ab036500_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab036620 Zm00028ab036620_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab036630 Zm00028ab036630_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab036760 Zm00028ab036760_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab036760 Zm00028ab036760_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab036760 Zm00028ab036760_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab036760 Zm00028ab036760_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab036760 Zm00028ab036760_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab036770 Zm00028ab036770_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab036940 Zm00028ab036940_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab036940 Zm00028ab036940_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab036940 Zm00028ab036940_P003 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab037000 Zm00028ab037000_P001 ubiquitous PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab037030 Zm00028ab037030_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab037030 Zm00028ab037030_P003 expected PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00028ab037070 Zm00028ab037070_P001 viridiplantae PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00028ab037070 Zm00028ab037070_P002 viridiplantae PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00028ab037070 Zm00028ab037070_P003 viridiplantae PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00028ab037070 Zm00028ab037070_P004 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab037140 Zm00028ab037140_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab037140 Zm00028ab037140_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab037140 Zm00028ab037140_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab037140 Zm00028ab037140_P004 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab037220 Zm00028ab037220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab037220 Zm00028ab037220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab037220 Zm00028ab037220_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab037330 Zm00028ab037330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab037330 Zm00028ab037330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab037330 Zm00028ab037330_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P006 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P007 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P008 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P009 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab037440 Zm00028ab037440_P010 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab037470 Zm00028ab037470_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab037480 Zm00028ab037480_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab037480 Zm00028ab037480_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab037480 Zm00028ab037480_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab037720 Zm00028ab037720_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab037820 Zm00028ab037820_P001 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab037850 Zm00028ab037850_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab037850 Zm00028ab037850_P001 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab037850 Zm00028ab037850_P003 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab037850 Zm00028ab037850_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab037950 Zm00028ab037950_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab037970 Zm00028ab037970_P001 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab038030 Zm00028ab038030_P001 excluded PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00028ab038060 Zm00028ab038060_P001 conditional PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00028ab038060 Zm00028ab038060_P002 conditional PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00028ab038060 Zm00028ab038060_P003 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab038230 Zm00028ab038230_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab038230 Zm00028ab038230_P002 expected PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00028ab038360 Zm00028ab038360_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab038450 Zm00028ab038450_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab038520 Zm00028ab038520_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab038550 Zm00028ab038550_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab038550 Zm00028ab038550_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab038570 Zm00028ab038570_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab038580 Zm00028ab038580_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab038580 Zm00028ab038580_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab038580 Zm00028ab038580_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab038580 Zm00028ab038580_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab038790 Zm00028ab038790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab038790 Zm00028ab038790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab038790 Zm00028ab038790_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab038810 Zm00028ab038810_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab038810 Zm00028ab038810_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab038820 Zm00028ab038820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab038820 Zm00028ab038820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab038820 Zm00028ab038820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab038840 Zm00028ab038840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab038840 Zm00028ab038840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab038840 Zm00028ab038840_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab038890 Zm00028ab038890_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab038890 Zm00028ab038890_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab038890 Zm00028ab038890_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab038890 Zm00028ab038890_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab038890 Zm00028ab038890_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab038920 Zm00028ab038920_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038920 Zm00028ab038920_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab038920 Zm00028ab038920_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038920 Zm00028ab038920_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038930 Zm00028ab038930_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab038940 Zm00028ab038940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038940 Zm00028ab038940_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab038940 Zm00028ab038940_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab038940 Zm00028ab038940_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab039040 Zm00028ab039040_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab039210 Zm00028ab039210_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab039210 Zm00028ab039210_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab039210 Zm00028ab039210_P004 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00028ab039260 Zm00028ab039260_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab039280 Zm00028ab039280_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab039280 Zm00028ab039280_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab039300 Zm00028ab039300_P001 NA PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00028ab039320 Zm00028ab039320_P001 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00028ab039320 Zm00028ab039320_P002 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00028ab039320 Zm00028ab039320_P003 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00028ab039320 Zm00028ab039320_P004 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab039580 Zm00028ab039580_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab039580 Zm00028ab039580_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab039580 Zm00028ab039580_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab039580 Zm00028ab039580_P001 NA GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P001 manual PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P001 manual PWY-7048 malate-oxaloacetate shuttle II MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P001 NA GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab039630 Zm00028ab039630_P002 manual PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P002 manual PWY-7048 malate-oxaloacetate shuttle II MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00028ab039630 Zm00028ab039630_P002 NA DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab039710 Zm00028ab039710_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab039830 Zm00028ab039830_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab039830 Zm00028ab039830_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab039830 Zm00028ab039830_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab039830 Zm00028ab039830_P001 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P002 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P003 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab039850 Zm00028ab039850_P004 viridiplantae PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00028ab039880 Zm00028ab039880_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00028ab039880 Zm00028ab039880_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P002 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P002 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P002 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P003 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P003 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00028ab040010 Zm00028ab040010_P003 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040020 Zm00028ab040020_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040020 Zm00028ab040020_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040020 Zm00028ab040020_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040020 Zm00028ab040020_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040030 Zm00028ab040030_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040030 Zm00028ab040030_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040050 Zm00028ab040050_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040050 Zm00028ab040050_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040060 Zm00028ab040060_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040060 Zm00028ab040060_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab040070 Zm00028ab040070_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab040070 Zm00028ab040070_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab040100 Zm00028ab040100_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab040100 Zm00028ab040100_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab040100 Zm00028ab040100_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab040100 Zm00028ab040100_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab040120 Zm00028ab040120_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab040120 Zm00028ab040120_P001 viridiplantae PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00028ab040190 Zm00028ab040190_P001 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00028ab040190 Zm00028ab040190_P002 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00028ab040190 Zm00028ab040190_P003 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040220 Zm00028ab040220_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040220 Zm00028ab040220_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040330 Zm00028ab040330_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040330 Zm00028ab040330_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040330 Zm00028ab040330_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00028ab040330 Zm00028ab040330_P002 NA PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab040620 Zm00028ab040620_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab040620 Zm00028ab040620_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab040620 Zm00028ab040620_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00028ab040620 Zm00028ab040620_P001 NA PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00028ab040650 Zm00028ab040650_P001 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00028ab040790 Zm00028ab040790_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00028ab040790 Zm00028ab040790_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab040810 Zm00028ab040810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab040810 Zm00028ab040810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab040810 Zm00028ab040810_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab040900 Zm00028ab040900_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab041010 Zm00028ab041010_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00028ab041230 Zm00028ab041230_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab041460 Zm00028ab041460_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab041540 Zm00028ab041540_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab041540 Zm00028ab041540_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab041540 Zm00028ab041540_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab041580 Zm00028ab041580_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab041680 Zm00028ab041680_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab041730 Zm00028ab041730_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab041730 Zm00028ab041730_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab041730 Zm00028ab041730_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab041730 Zm00028ab041730_P004 conditional PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P001 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P001 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P001 NA PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P002 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P002 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00028ab041760 Zm00028ab041760_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab041800 Zm00028ab041800_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab041800 Zm00028ab041800_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab041800 Zm00028ab041800_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab041800 Zm00028ab041800_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab041880 Zm00028ab041880_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab041890 Zm00028ab041890_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab042000 Zm00028ab042000_P002 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab042000 Zm00028ab042000_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab042000 Zm00028ab042000_P003 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab042000 Zm00028ab042000_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P004 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P005 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab042000 Zm00028ab042000_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab042010 Zm00028ab042010_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab042040 Zm00028ab042040_P004 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab042320 Zm00028ab042320_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab042320 Zm00028ab042320_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab042320 Zm00028ab042320_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab042320 Zm00028ab042320_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab042320 Zm00028ab042320_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab042340 Zm00028ab042340_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab042370 Zm00028ab042370_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab042380 Zm00028ab042380_P001 expected PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab042400 Zm00028ab042400_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab042400 Zm00028ab042400_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab042400 Zm00028ab042400_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab042400 Zm00028ab042400_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab042480 Zm00028ab042480_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab042480 Zm00028ab042480_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab042600 Zm00028ab042600_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab042600 Zm00028ab042600_P002 expected PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab042700 Zm00028ab042700_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab043010 Zm00028ab043010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab043010 Zm00028ab043010_P002 expected PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00028ab043030 Zm00028ab043030_P002 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab043100 Zm00028ab043100_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab043100 Zm00028ab043100_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab043400 Zm00028ab043400_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab043400 Zm00028ab043400_P002 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P004 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P005 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P005 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab043420 Zm00028ab043420_P005 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab043720 Zm00028ab043720_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab043720 Zm00028ab043720_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab043720 Zm00028ab043720_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab043720 Zm00028ab043720_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab043780 Zm00028ab043780_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab043790 Zm00028ab043790_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab043790 Zm00028ab043790_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab043800 Zm00028ab043800_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab043800 Zm00028ab043800_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043930 Zm00028ab043930_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab043940 Zm00028ab043940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043940 Zm00028ab043940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab043940 Zm00028ab043940_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab044370 Zm00028ab044370_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab044580 Zm00028ab044580_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab044580 Zm00028ab044580_P001 conditional PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab044720 Zm00028ab044720_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab044980 Zm00028ab044980_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab044980 Zm00028ab044980_P002 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab045120 Zm00028ab045120_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab045120 Zm00028ab045120_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab045120 Zm00028ab045120_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00028ab045140 Zm00028ab045140_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00028ab045140 Zm00028ab045140_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00028ab045140 Zm00028ab045140_P001 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab045180 Zm00028ab045180_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab045240 Zm00028ab045240_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab045240 Zm00028ab045240_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab045240 Zm00028ab045240_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab045240 Zm00028ab045240_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab045520 Zm00028ab045520_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab045570 Zm00028ab045570_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab045570 Zm00028ab045570_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P003 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P004 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P004 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P004 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P005 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P005 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P005 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P007 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P007 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P007 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab045670 Zm00028ab045670_P007 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045780 Zm00028ab045780_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045780 Zm00028ab045780_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045780 Zm00028ab045780_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045780 Zm00028ab045780_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045800 Zm00028ab045800_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab045800 Zm00028ab045800_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab045860 Zm00028ab045860_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab045860 Zm00028ab045860_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab045860 Zm00028ab045860_P001 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab045930 Zm00028ab045930_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab045930 Zm00028ab045930_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab045930 Zm00028ab045930_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab045930 Zm00028ab045930_P001 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P003 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P003 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab046470 Zm00028ab046470_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab046800 Zm00028ab046800_P002 NA PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P005 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P006 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P006 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P006 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P006 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P007 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P007 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P007 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab046840 Zm00028ab046840_P007 ubiquitous PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab046860 Zm00028ab046860_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab046860 Zm00028ab046860_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab046860 Zm00028ab046860_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab046860 Zm00028ab046860_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047030 Zm00028ab047030_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047030 Zm00028ab047030_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047030 Zm00028ab047030_P003 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047030 Zm00028ab047030_P004 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047050 Zm00028ab047050_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047050 Zm00028ab047050_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab047050 Zm00028ab047050_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab047110 Zm00028ab047110_P003 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab047430 Zm00028ab047430_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab047660 Zm00028ab047660_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab047750 Zm00028ab047750_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab048020 Zm00028ab048020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab048020 Zm00028ab048020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab048020 Zm00028ab048020_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-9291 EC-4.2.3.34 Zm00028ab048050 Zm00028ab048050_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab048070 Zm00028ab048070_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab048070 Zm00028ab048070_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab048070 Zm00028ab048070_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab048070 Zm00028ab048070_P002 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab048080 Zm00028ab048080_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab048440 Zm00028ab048440_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab048550 Zm00028ab048550_P001 ubiquitous PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00028ab048560 Zm00028ab048560_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00028ab048560 Zm00028ab048560_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab048720 Zm00028ab048720_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab048730 Zm00028ab048730_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab048740 Zm00028ab048740_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab048740 Zm00028ab048740_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab048740 Zm00028ab048740_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P002 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P003 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab048760 Zm00028ab048760_P003 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab048790 Zm00028ab048790_P001 viridiplantae PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab048800 Zm00028ab048800_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab048800 Zm00028ab048800_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab048800 Zm00028ab048800_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab048860 Zm00028ab048860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab048860 Zm00028ab048860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab048860 Zm00028ab048860_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab048900 Zm00028ab048900_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab049010 Zm00028ab049010_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab049010 Zm00028ab049010_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab049010 Zm00028ab049010_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab049010 Zm00028ab049010_P004 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab049110 Zm00028ab049110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab049110 Zm00028ab049110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab049110 Zm00028ab049110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab049180 Zm00028ab049180_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab049180 Zm00028ab049180_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab049300 Zm00028ab049300_P001 expected PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab049350 Zm00028ab049350_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab049350 Zm00028ab049350_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab049390 Zm00028ab049390_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab049390 Zm00028ab049390_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab049400 Zm00028ab049400_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab049400 Zm00028ab049400_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab049490 Zm00028ab049490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab049490 Zm00028ab049490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab049490 Zm00028ab049490_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab049600 Zm00028ab049600_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab049920 Zm00028ab049920_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab049920 Zm00028ab049920_P001 viridiplantae PWY-4702 phytate degradation I RXN-7241 EC-3.1.3.26 Zm00028ab050110 Zm00028ab050110_P002 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00028ab050160 Zm00028ab050160_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00028ab050160 Zm00028ab050160_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00028ab050160 Zm00028ab050160_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab050200 Zm00028ab050200_P001 NA PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab050250 Zm00028ab050250_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab050250 Zm00028ab050250_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab050520 Zm00028ab050520_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab050520 Zm00028ab050520_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab050520 Zm00028ab050520_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab050520 Zm00028ab050520_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab050520 Zm00028ab050520_P001 excluded PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab050810 Zm00028ab050810_P002 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab050840 Zm00028ab050840_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab050840 Zm00028ab050840_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab050840 Zm00028ab050840_P001 manual PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab050870 Zm00028ab050870_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab050870 Zm00028ab050870_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab050870 Zm00028ab050870_P003 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab050880 Zm00028ab050880_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab050880 Zm00028ab050880_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab050880 Zm00028ab050880_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab050880 Zm00028ab050880_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab050880 Zm00028ab050880_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab050920 Zm00028ab050920_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab050920 Zm00028ab050920_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab051080 Zm00028ab051080_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab051180 Zm00028ab051180_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab051180 Zm00028ab051180_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab051180 Zm00028ab051180_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab051180 Zm00028ab051180_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab051180 Zm00028ab051180_P005 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab051260 Zm00028ab051260_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab051280 Zm00028ab051280_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab051280 Zm00028ab051280_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab051280 Zm00028ab051280_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab051280 Zm00028ab051280_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00028ab051310 Zm00028ab051310_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab051320 Zm00028ab051320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab051320 Zm00028ab051320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab051320 Zm00028ab051320_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab051460 Zm00028ab051460_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab051580 Zm00028ab051580_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab051580 Zm00028ab051580_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab051580 Zm00028ab051580_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab051580 Zm00028ab051580_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab051590 Zm00028ab051590_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab051590 Zm00028ab051590_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab051590 Zm00028ab051590_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab051590 Zm00028ab051590_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab051820 Zm00028ab051820_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab051890 Zm00028ab051890_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab052320 Zm00028ab052320_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab052320 Zm00028ab052320_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab052320 Zm00028ab052320_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab052320 Zm00028ab052320_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00028ab052330 Zm00028ab052330_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00028ab052330 Zm00028ab052330_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00028ab052330 Zm00028ab052330_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00028ab052330 Zm00028ab052330_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab052520 Zm00028ab052520_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab052520 Zm00028ab052520_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab052520 Zm00028ab052520_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab052520 Zm00028ab052520_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab052750 Zm00028ab052750_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab052750 Zm00028ab052750_P002 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab052750 Zm00028ab052750_P003 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab052750 Zm00028ab052750_P004 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab052750 Zm00028ab052750_P005 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab052780 Zm00028ab052780_P001 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab052920 Zm00028ab052920_P003 viridiplantae PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab053050 Zm00028ab053050_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab053050 Zm00028ab053050_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab053050 Zm00028ab053050_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab053050 Zm00028ab053050_P001 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab053400 Zm00028ab053400_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P004 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P005 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P005 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P006 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P006 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P006 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P007 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P007 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab053550 Zm00028ab053550_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab053670 Zm00028ab053670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab053670 Zm00028ab053670_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab053680 Zm00028ab053680_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab053680 Zm00028ab053680_P001 ubiquitous PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab053790 Zm00028ab053790_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00028ab053800 Zm00028ab053800_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00028ab053800 Zm00028ab053800_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00028ab053800 Zm00028ab053800_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00028ab053800 Zm00028ab053800_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00028ab053810 Zm00028ab053810_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab054030 Zm00028ab054030_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00028ab054120 Zm00028ab054120_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00028ab054120 Zm00028ab054120_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00028ab054120 Zm00028ab054120_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00028ab054120 Zm00028ab054120_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00028ab054120 Zm00028ab054120_P003 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00028ab054120 Zm00028ab054120_P003 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab054170 Zm00028ab054170_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab054170 Zm00028ab054170_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab054170 Zm00028ab054170_P003 expected GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00028ab054240 Zm00028ab054240_P001 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P001 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P001 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P002 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P002 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P003 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00028ab054360 Zm00028ab054360_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab054630 Zm00028ab054630_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab054630 Zm00028ab054630_P002 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab054690 Zm00028ab054690_P002 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00028ab054720 Zm00028ab054720_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054760 Zm00028ab054760_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054760 Zm00028ab054760_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054760 Zm00028ab054760_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P004 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P004 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P004 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P005 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P005 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab054770 Zm00028ab054770_P005 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab054820 Zm00028ab054820_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab054820 Zm00028ab054820_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab054860 Zm00028ab054860_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab054860 Zm00028ab054860_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab054860 Zm00028ab054860_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab054910 Zm00028ab054910_P004 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054950 Zm00028ab054950_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054950 Zm00028ab054950_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054950 Zm00028ab054950_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054950 Zm00028ab054950_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054950 Zm00028ab054950_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054960 Zm00028ab054960_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054960 Zm00028ab054960_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054960 Zm00028ab054960_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054960 Zm00028ab054960_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab054970 Zm00028ab054970_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab055090 Zm00028ab055090_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab055160 Zm00028ab055160_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab055160 Zm00028ab055160_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab055180 Zm00028ab055180_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab055180 Zm00028ab055180_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab055180 Zm00028ab055180_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab055180 Zm00028ab055180_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab055350 Zm00028ab055350_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab055490 Zm00028ab055490_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab055490 Zm00028ab055490_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab055560 Zm00028ab055560_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) RXN-2962 EC-1.1.1.284 Zm00028ab055560 Zm00028ab055560_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab055570 Zm00028ab055570_P002 conditional PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab055580 Zm00028ab055580_P001 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00028ab055760 Zm00028ab055760_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00028ab055760 Zm00028ab055760_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00028ab055760 Zm00028ab055760_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00028ab055760 Zm00028ab055760_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab055900 Zm00028ab055900_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab055990 Zm00028ab055990_P001 viridiplantae PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab056060 Zm00028ab056060_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab056090 Zm00028ab056090_P001 conditional PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00028ab056460 Zm00028ab056460_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab056460 Zm00028ab056460_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab056460 Zm00028ab056460_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab056470 Zm00028ab056470_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab056470 Zm00028ab056470_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab056470 Zm00028ab056470_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab056470 Zm00028ab056470_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab056470 Zm00028ab056470_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab056470 Zm00028ab056470_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab056570 Zm00028ab056570_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab056570 Zm00028ab056570_P001 NA NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-884 EC-1.17.7.4 Zm00028ab056860 Zm00028ab056860_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-884 EC-1.17.7.4 Zm00028ab056860 Zm00028ab056860_P001 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab056990 Zm00028ab056990_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab056990 Zm00028ab056990_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab056990 Zm00028ab056990_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab056990 Zm00028ab056990_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab056990 Zm00028ab056990_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab057020 Zm00028ab057020_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab057020 Zm00028ab057020_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab057020 Zm00028ab057020_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab057020 Zm00028ab057020_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00028ab057160 Zm00028ab057160_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00028ab057160 Zm00028ab057160_P002 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00028ab057160 Zm00028ab057160_P003 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00028ab057160 Zm00028ab057160_P004 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab057170 Zm00028ab057170_P005 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab057210 Zm00028ab057210_P003 excluded PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab057310 Zm00028ab057310_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab057310 Zm00028ab057310_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab057470 Zm00028ab057470_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab057510 Zm00028ab057510_P002 expected PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00028ab057610 Zm00028ab057610_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab057610 Zm00028ab057610_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab057610 Zm00028ab057610_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00028ab057610 Zm00028ab057610_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00028ab057610 Zm00028ab057610_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00028ab057610 Zm00028ab057610_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab057620 Zm00028ab057620_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab057620 Zm00028ab057620_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab057620 Zm00028ab057620_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab058000 Zm00028ab058000_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab058000 Zm00028ab058000_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab058000 Zm00028ab058000_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab058000 Zm00028ab058000_P002 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab058220 Zm00028ab058220_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab058480 Zm00028ab058480_P001 conditional PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00028ab058500 Zm00028ab058500_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab058510 Zm00028ab058510_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab058520 Zm00028ab058520_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab058520 Zm00028ab058520_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab058520 Zm00028ab058520_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab058520 Zm00028ab058520_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab058520 Zm00028ab058520_P005 expected PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab058550 Zm00028ab058550_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab058550 Zm00028ab058550_P002 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab058550 Zm00028ab058550_P003 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab058550 Zm00028ab058550_P004 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab058550 Zm00028ab058550_P005 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab058910 Zm00028ab058910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058910 Zm00028ab058910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058910 Zm00028ab058910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab058920 Zm00028ab058920_P002 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab059320 Zm00028ab059320_P001 excluded PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab059390 Zm00028ab059390_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab059390 Zm00028ab059390_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab059390 Zm00028ab059390_P002 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab059390 Zm00028ab059390_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab059580 Zm00028ab059580_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab059580 Zm00028ab059580_P002 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab059790 Zm00028ab059790_P001 NA PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab059810 Zm00028ab059810_P002 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00028ab059880 Zm00028ab059880_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00028ab059880 Zm00028ab059880_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00028ab059880 Zm00028ab059880_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab059890 Zm00028ab059890_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab059920 Zm00028ab059920_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab060030 Zm00028ab060030_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab060090 Zm00028ab060090_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab060090 Zm00028ab060090_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab060100 Zm00028ab060100_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab060210 Zm00028ab060210_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab060210 Zm00028ab060210_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab060210 Zm00028ab060210_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab060210 Zm00028ab060210_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab060210 Zm00028ab060210_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab060250 Zm00028ab060250_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab060250 Zm00028ab060250_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00028ab060250 Zm00028ab060250_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060270 Zm00028ab060270_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060270 Zm00028ab060270_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060270 Zm00028ab060270_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060270 Zm00028ab060270_P002 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060300 Zm00028ab060300_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060300 Zm00028ab060300_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060300 Zm00028ab060300_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab060300 Zm00028ab060300_P002 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab060460 Zm00028ab060460_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab060460 Zm00028ab060460_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab060460 Zm00028ab060460_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab060460 Zm00028ab060460_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab060530 Zm00028ab060530_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab060590 Zm00028ab060590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab060590 Zm00028ab060590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab060590 Zm00028ab060590_P001 conditional PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00028ab060610 Zm00028ab060610_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060890 Zm00028ab060890_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060900 Zm00028ab060900_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060950 Zm00028ab060950_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060950 Zm00028ab060950_P002 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060960 Zm00028ab060960_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab060960 Zm00028ab060960_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab061160 Zm00028ab061160_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab061170 Zm00028ab061170_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab061180 Zm00028ab061180_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00028ab061190 Zm00028ab061190_P001 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00028ab061190 Zm00028ab061190_P001 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P001 expected GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P002 expected GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P003 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00028ab061190 Zm00028ab061190_P004 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00028ab061190 Zm00028ab061190_P004 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P004 expected GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab061190 Zm00028ab061190_P005 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab061410 Zm00028ab061410_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab061410 Zm00028ab061410_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab061410 Zm00028ab061410_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab061410 Zm00028ab061410_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P003 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P003 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P004 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061460 Zm00028ab061460_P004 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061470 Zm00028ab061470_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061470 Zm00028ab061470_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061470 Zm00028ab061470_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab061470 Zm00028ab061470_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab061740 Zm00028ab061740_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab061740 Zm00028ab061740_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab061820 Zm00028ab061820_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab061820 Zm00028ab061820_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab061860 Zm00028ab061860_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab061990 Zm00028ab061990_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab061990 Zm00028ab061990_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00028ab062060 Zm00028ab062060_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab062080 Zm00028ab062080_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab062080 Zm00028ab062080_P002 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab062100 Zm00028ab062100_P003 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab062240 Zm00028ab062240_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab062450 Zm00028ab062450_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab062540 Zm00028ab062540_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab062540 Zm00028ab062540_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab062540 Zm00028ab062540_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab062540 Zm00028ab062540_P004 expected PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00028ab062600 Zm00028ab062600_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab062700 Zm00028ab062700_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00028ab062850 Zm00028ab062850_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00028ab062850 Zm00028ab062850_P002 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00028ab062850 Zm00028ab062850_P003 viridiplantae PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P001 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P001 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P002 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P002 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P003 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00028ab063000 Zm00028ab063000_P003 excluded PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab063240 Zm00028ab063240_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab063240 Zm00028ab063240_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab063240 Zm00028ab063240_P001 NA UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab063370 Zm00028ab063370_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab063380 Zm00028ab063380_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00028ab063450 Zm00028ab063450_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00028ab063450 Zm00028ab063450_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab063700 Zm00028ab063700_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab063700 Zm00028ab063700_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00028ab063710 Zm00028ab063710_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab063780 Zm00028ab063780_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab063780 Zm00028ab063780_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab063910 Zm00028ab063910_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab063910 Zm00028ab063910_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab063910 Zm00028ab063910_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab063920 Zm00028ab063920_P001 ubiquitous PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00028ab063930 Zm00028ab063930_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab063940 Zm00028ab063940_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab064030 Zm00028ab064030_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab064030 Zm00028ab064030_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab064030 Zm00028ab064030_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab064030 Zm00028ab064030_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab064030 Zm00028ab064030_P005 expected PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab064040 Zm00028ab064040_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab064070 Zm00028ab064070_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00028ab064090 Zm00028ab064090_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00028ab064090 Zm00028ab064090_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab064100 Zm00028ab064100_P002 NA PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P001 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P001 expected PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P002 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00028ab064110 Zm00028ab064110_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab064170 Zm00028ab064170_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab064170 Zm00028ab064170_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab064170 Zm00028ab064170_P003 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab064170 Zm00028ab064170_P004 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab064480 Zm00028ab064480_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab064480 Zm00028ab064480_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab064540 Zm00028ab064540_P004 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P003 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P004 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P004 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P005 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab064730 Zm00028ab064730_P005 expected PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab064970 Zm00028ab064970_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab065000 Zm00028ab065000_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab065000 Zm00028ab065000_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab065000 Zm00028ab065000_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab065000 Zm00028ab065000_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab065000 Zm00028ab065000_P005 expected PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab065040 Zm00028ab065040_P001 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P002 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P003 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P003 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab065160 Zm00028ab065160_P003 NA PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab065170 Zm00028ab065170_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab065170 Zm00028ab065170_P002 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab065210 Zm00028ab065210_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab065270 Zm00028ab065270_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab065300 Zm00028ab065300_P004 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab065380 Zm00028ab065380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab065450 Zm00028ab065450_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00028ab065460 Zm00028ab065460_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00028ab065460 Zm00028ab065460_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab065500 Zm00028ab065500_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab065530 Zm00028ab065530_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab065530 Zm00028ab065530_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab065530 Zm00028ab065530_P004 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab065530 Zm00028ab065530_P004 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab065550 Zm00028ab065550_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab065550 Zm00028ab065550_P002 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab065640 Zm00028ab065640_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab065640 Zm00028ab065640_P002 viridiplantae PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00028ab065670 Zm00028ab065670_P001 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00028ab065670 Zm00028ab065670_P002 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab065780 Zm00028ab065780_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab066000 Zm00028ab066000_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab066120 Zm00028ab066120_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab066160 Zm00028ab066160_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab066160 Zm00028ab066160_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab066160 Zm00028ab066160_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab066500 Zm00028ab066500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab066500 Zm00028ab066500_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab066650 Zm00028ab066650_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab066650 Zm00028ab066650_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab066650 Zm00028ab066650_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab066650 Zm00028ab066650_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab066900 Zm00028ab066900_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab066900 Zm00028ab066900_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab066900 Zm00028ab066900_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab066900 Zm00028ab066900_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab066990 Zm00028ab066990_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab067100 Zm00028ab067100_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab067140 Zm00028ab067140_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab067190 Zm00028ab067190_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab067200 Zm00028ab067200_P001 viridiplantae PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00028ab067300 Zm00028ab067300_P001 conditional PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00028ab067300 Zm00028ab067300_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab067470 Zm00028ab067470_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab067490 Zm00028ab067490_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab067490 Zm00028ab067490_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab067490 Zm00028ab067490_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab067490 Zm00028ab067490_P004 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab067520 Zm00028ab067520_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab067530 Zm00028ab067530_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab067550 Zm00028ab067550_P001 viridiplantae PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P001 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P002 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P003 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P004 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P005 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00028ab067580 Zm00028ab067580_P006 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab067650 Zm00028ab067650_P002 conditional PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067720 Zm00028ab067720_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067720 Zm00028ab067720_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067730 Zm00028ab067730_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067730 Zm00028ab067730_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067730 Zm00028ab067730_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab067730 Zm00028ab067730_P004 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab067870 Zm00028ab067870_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab067870 Zm00028ab067870_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab067870 Zm00028ab067870_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab067870 Zm00028ab067870_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab067890 Zm00028ab067890_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab067890 Zm00028ab067890_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab067890 Zm00028ab067890_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab067890 Zm00028ab067890_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab068050 Zm00028ab068050_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab068070 Zm00028ab068070_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab068080 Zm00028ab068080_P001 viridiplantae PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab068170 Zm00028ab068170_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab068170 Zm00028ab068170_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab068170 Zm00028ab068170_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab068170 Zm00028ab068170_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab068190 Zm00028ab068190_P002 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00028ab068280 Zm00028ab068280_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00028ab068280 Zm00028ab068280_P002 viridiplantae PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab068310 Zm00028ab068310_P002 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068410 Zm00028ab068410_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068410 Zm00028ab068410_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068410 Zm00028ab068410_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068410 Zm00028ab068410_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068410 Zm00028ab068410_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068420 Zm00028ab068420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068420 Zm00028ab068420_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068420 Zm00028ab068420_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068420 Zm00028ab068420_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab068420 Zm00028ab068420_P001 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab068580 Zm00028ab068580_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab068580 Zm00028ab068580_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab068580 Zm00028ab068580_P003 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab068580 Zm00028ab068580_P004 NA PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P004 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P004 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P004 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P005 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P005 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab068590 Zm00028ab068590_P005 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00028ab068610 Zm00028ab068610_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab068620 Zm00028ab068620_P002 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00028ab068940 Zm00028ab068940_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab069030 Zm00028ab069030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab069030 Zm00028ab069030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab069030 Zm00028ab069030_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab069050 Zm00028ab069050_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab069050 Zm00028ab069050_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab069100 Zm00028ab069100_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P002 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P003 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab069150 Zm00028ab069150_P004 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab069170 Zm00028ab069170_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab069170 Zm00028ab069170_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab069170 Zm00028ab069170_P003 expected PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00028ab069360 Zm00028ab069360_P001 viridiplantae PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00028ab069360 Zm00028ab069360_P002 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab069510 Zm00028ab069510_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab069510 Zm00028ab069510_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab069510 Zm00028ab069510_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab069510 Zm00028ab069510_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab069530 Zm00028ab069530_P001 ubiquitous PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab069540 Zm00028ab069540_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab069670 Zm00028ab069670_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab069670 Zm00028ab069670_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab069670 Zm00028ab069670_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab069970 Zm00028ab069970_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab070070 Zm00028ab070070_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab070070 Zm00028ab070070_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab070070 Zm00028ab070070_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab070290 Zm00028ab070290_P001 NA PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00028ab071030 Zm00028ab071030_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab071090 Zm00028ab071090_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00028ab071110 Zm00028ab071110_P001 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab071130 Zm00028ab071130_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab071130 Zm00028ab071130_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab071130 Zm00028ab071130_P003 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab071130 Zm00028ab071130_P004 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab071140 Zm00028ab071140_P001 ubiquitous PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab071180 Zm00028ab071180_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab071180 Zm00028ab071180_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab071180 Zm00028ab071180_P003 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab071410 Zm00028ab071410_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00028ab071430 Zm00028ab071430_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00028ab071430 Zm00028ab071430_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00028ab071430 Zm00028ab071430_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab071610 Zm00028ab071610_P005 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab071660 Zm00028ab071660_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab071660 Zm00028ab071660_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab071660 Zm00028ab071660_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab071660 Zm00028ab071660_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab071660 Zm00028ab071660_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab071660 Zm00028ab071660_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab071660 Zm00028ab071660_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab071660 Zm00028ab071660_P002 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab071690 Zm00028ab071690_P003 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00028ab071710 Zm00028ab071710_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00028ab071710 Zm00028ab071710_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab071720 Zm00028ab071720_P001 NA UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab071730 Zm00028ab071730_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab071820 Zm00028ab071820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab071820 Zm00028ab071820_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab071820 Zm00028ab071820_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab071820 Zm00028ab071820_P004 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab071860 Zm00028ab071860_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab071860 Zm00028ab071860_P002 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab071860 Zm00028ab071860_P003 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab071860 Zm00028ab071860_P004 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00028ab071910 Zm00028ab071910_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00028ab071910 Zm00028ab071910_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00028ab071920 Zm00028ab071920_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00028ab071920 Zm00028ab071920_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00028ab071920 Zm00028ab071920_P002 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00028ab071920 Zm00028ab071920_P002 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00028ab071920 Zm00028ab071920_P003 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00028ab071920 Zm00028ab071920_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab071940 Zm00028ab071940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab071940 Zm00028ab071940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab071940 Zm00028ab071940_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00028ab071970 Zm00028ab071970_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00028ab071970 Zm00028ab071970_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab072020 Zm00028ab072020_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab072050 Zm00028ab072050_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab072050 Zm00028ab072050_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab072050 Zm00028ab072050_P003 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00028ab072160 Zm00028ab072160_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00028ab072160 Zm00028ab072160_P002 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00028ab072170 Zm00028ab072170_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab072420 Zm00028ab072420_P001 viridiplantae PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab072480 Zm00028ab072480_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab072570 Zm00028ab072570_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab072620 Zm00028ab072620_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab072620 Zm00028ab072620_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab072710 Zm00028ab072710_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab072710 Zm00028ab072710_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab072720 Zm00028ab072720_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab072730 Zm00028ab072730_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab072730 Zm00028ab072730_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P003 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab072860 Zm00028ab072860_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00028ab073320 Zm00028ab073320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00028ab073320 Zm00028ab073320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00028ab073320 Zm00028ab073320_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00028ab073320 Zm00028ab073320_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00028ab073320 Zm00028ab073320_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00028ab073320 Zm00028ab073320_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00028ab073320 Zm00028ab073320_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00028ab073320 Zm00028ab073320_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00028ab073320 Zm00028ab073320_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00028ab073320 Zm00028ab073320_P005 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P005 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P006 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab073440 Zm00028ab073440_P007 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab073690 Zm00028ab073690_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab073910 Zm00028ab073910_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab073910 Zm00028ab073910_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab073910 Zm00028ab073910_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab073910 Zm00028ab073910_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab073950 Zm00028ab073950_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab073950 Zm00028ab073950_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab073950 Zm00028ab073950_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab074150 Zm00028ab074150_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab074170 Zm00028ab074170_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab074170 Zm00028ab074170_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab074170 Zm00028ab074170_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab074170 Zm00028ab074170_P002 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab074280 Zm00028ab074280_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab074280 Zm00028ab074280_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab074280 Zm00028ab074280_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab074280 Zm00028ab074280_P004 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab074390 Zm00028ab074390_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab075050 Zm00028ab075050_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab075130 Zm00028ab075130_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab075130 Zm00028ab075130_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab075130 Zm00028ab075130_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab075130 Zm00028ab075130_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab075210 Zm00028ab075210_P001 expected PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab075230 Zm00028ab075230_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab075230 Zm00028ab075230_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab075230 Zm00028ab075230_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab075230 Zm00028ab075230_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab075230 Zm00028ab075230_P002 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab075250 Zm00028ab075250_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab075470 Zm00028ab075470_P003 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13642 EC-1.13.11.68 Zm00028ab075480 Zm00028ab075480_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab075540 Zm00028ab075540_P001 NA PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab075650 Zm00028ab075650_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab075670 Zm00028ab075670_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab075670 Zm00028ab075670_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab075700 Zm00028ab075700_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab075720 Zm00028ab075720_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab075720 Zm00028ab075720_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab075720 Zm00028ab075720_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab075720 Zm00028ab075720_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab075930 Zm00028ab075930_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab075930 Zm00028ab075930_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab075930 Zm00028ab075930_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab075930 Zm00028ab075930_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab075930 Zm00028ab075930_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab075970 Zm00028ab075970_P001 NA GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab076000 Zm00028ab076000_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab076000 Zm00028ab076000_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab076410 Zm00028ab076410_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab076410 Zm00028ab076410_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab076600 Zm00028ab076600_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab076600 Zm00028ab076600_P002 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab076610 Zm00028ab076610_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00028ab076670 Zm00028ab076670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab076860 Zm00028ab076860_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077000 Zm00028ab077000_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P005 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P005 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077010 Zm00028ab077010_P005 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077020 Zm00028ab077020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077020 Zm00028ab077020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077020 Zm00028ab077020_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077040 Zm00028ab077040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077040 Zm00028ab077040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077040 Zm00028ab077040_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077050 Zm00028ab077050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077050 Zm00028ab077050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077050 Zm00028ab077050_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077060 Zm00028ab077060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077060 Zm00028ab077060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077060 Zm00028ab077060_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab077080 Zm00028ab077080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077080 Zm00028ab077080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab077080 Zm00028ab077080_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab077300 Zm00028ab077300_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab077300 Zm00028ab077300_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab077300 Zm00028ab077300_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab077300 Zm00028ab077300_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab077300 Zm00028ab077300_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab077370 Zm00028ab077370_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab077420 Zm00028ab077420_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab077420 Zm00028ab077420_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab077420 Zm00028ab077420_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab077420 Zm00028ab077420_P004 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab077480 Zm00028ab077480_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab077480 Zm00028ab077480_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab077480 Zm00028ab077480_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab077640 Zm00028ab077640_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab077640 Zm00028ab077640_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab077860 Zm00028ab077860_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab077860 Zm00028ab077860_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P005 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P006 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab077880 Zm00028ab077880_P007 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab077890 Zm00028ab077890_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab077910 Zm00028ab077910_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab078030 Zm00028ab078030_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab078120 Zm00028ab078120_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab078150 Zm00028ab078150_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab078170 Zm00028ab078170_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab078170 Zm00028ab078170_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab078170 Zm00028ab078170_P003 expected PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00028ab078330 Zm00028ab078330_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00028ab078330 Zm00028ab078330_P002 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab078560 Zm00028ab078560_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab078600 Zm00028ab078600_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab078600 Zm00028ab078600_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab078600 Zm00028ab078600_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab078600 Zm00028ab078600_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078610 Zm00028ab078610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078610 Zm00028ab078610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078650 Zm00028ab078650_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078650 Zm00028ab078650_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078650 Zm00028ab078650_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078650 Zm00028ab078650_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab078650 Zm00028ab078650_P005 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078710 Zm00028ab078710_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078710 Zm00028ab078710_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078720 Zm00028ab078720_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078720 Zm00028ab078720_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078720 Zm00028ab078720_P003 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078720 Zm00028ab078720_P004 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab078720 Zm00028ab078720_P005 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab079010 Zm00028ab079010_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab079010 Zm00028ab079010_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab079010 Zm00028ab079010_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab079010 Zm00028ab079010_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab079020 Zm00028ab079020_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab079050 Zm00028ab079050_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab079150 Zm00028ab079150_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab079230 Zm00028ab079230_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab079230 Zm00028ab079230_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab079230 Zm00028ab079230_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00028ab079240 Zm00028ab079240_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00028ab079240 Zm00028ab079240_P002 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab079420 Zm00028ab079420_P003 ubiquitous PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab079500 Zm00028ab079500_P004 NA ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab079660 Zm00028ab079660_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab079660 Zm00028ab079660_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab079660 Zm00028ab079660_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab079660 Zm00028ab079660_P002 viridiplantae PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00028ab079730 Zm00028ab079730_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab079730 Zm00028ab079730_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab079730 Zm00028ab079730_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00028ab079730 Zm00028ab079730_P001 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab079940 Zm00028ab079940_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab079950 Zm00028ab079950_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab079950 Zm00028ab079950_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab079950 Zm00028ab079950_P003 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P002 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P003 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab079960 Zm00028ab079960_P003 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab080130 Zm00028ab080130_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab080130 Zm00028ab080130_P001 viridiplantae GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00028ab080400 Zm00028ab080400_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00028ab080400 Zm00028ab080400_P001 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00028ab080400 Zm00028ab080400_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00028ab080400 Zm00028ab080400_P002 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab080450 Zm00028ab080450_P006 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab080540 Zm00028ab080540_P001 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab080680 Zm00028ab080680_P001 conditional PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab080690 Zm00028ab080690_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab080700 Zm00028ab080700_P001 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab080930 Zm00028ab080930_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab080980 Zm00028ab080980_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab081020 Zm00028ab081020_P001 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab081550 Zm00028ab081550_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab081590 Zm00028ab081590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab081590 Zm00028ab081590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab081590 Zm00028ab081590_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab081630 Zm00028ab081630_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab081630 Zm00028ab081630_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab081690 Zm00028ab081690_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00028ab081910 Zm00028ab081910_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00028ab081910 Zm00028ab081910_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab082030 Zm00028ab082030_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab082030 Zm00028ab082030_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab082030 Zm00028ab082030_P002 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab082060 Zm00028ab082060_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab082060 Zm00028ab082060_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab082060 Zm00028ab082060_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab082080 Zm00028ab082080_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab082090 Zm00028ab082090_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00028ab082120 Zm00028ab082120_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00028ab082120 Zm00028ab082120_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00028ab082120 Zm00028ab082120_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00028ab082120 Zm00028ab082120_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00028ab082120 Zm00028ab082120_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00028ab082120 Zm00028ab082120_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00028ab082120 Zm00028ab082120_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00028ab082230 Zm00028ab082230_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00028ab082230 Zm00028ab082230_P002 conditional PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082550 Zm00028ab082550_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082550 Zm00028ab082550_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082550 Zm00028ab082550_P001 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082570 Zm00028ab082570_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082570 Zm00028ab082570_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab082570 Zm00028ab082570_P001 excluded PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082730 Zm00028ab082730_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082730 Zm00028ab082730_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082730 Zm00028ab082730_P003 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082730 Zm00028ab082730_P004 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab082750 Zm00028ab082750_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab082750 Zm00028ab082750_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab082760 Zm00028ab082760_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab082760 Zm00028ab082760_P004 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab082760 Zm00028ab082760_P005 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082780 Zm00028ab082780_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab082780 Zm00028ab082780_P002 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab082800 Zm00028ab082800_P003 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00028ab082980 Zm00028ab082980_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00028ab082980 Zm00028ab082980_P002 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab083110 Zm00028ab083110_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab083110 Zm00028ab083110_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab083110 Zm00028ab083110_P003 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab083110 Zm00028ab083110_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab083430 Zm00028ab083430_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab083510 Zm00028ab083510_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab083550 Zm00028ab083550_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab083550 Zm00028ab083550_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab083550 Zm00028ab083550_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab083550 Zm00028ab083550_P004 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GART-RXN EC-2.1.2.2 Zm00028ab083730 Zm00028ab083730_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate GART-RXN EC-2.1.2.2 Zm00028ab083730 Zm00028ab083730_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083900 Zm00028ab083900_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083900 Zm00028ab083900_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083910 Zm00028ab083910_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083910 Zm00028ab083910_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083910 Zm00028ab083910_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab083910 Zm00028ab083910_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab083930 Zm00028ab083930_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab083930 Zm00028ab083930_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab083930 Zm00028ab083930_P003 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab083960 Zm00028ab083960_P006 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab084060 Zm00028ab084060_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab084160 Zm00028ab084160_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab084210 Zm00028ab084210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab084210 Zm00028ab084210_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab084210 Zm00028ab084210_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab084240 Zm00028ab084240_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab084240 Zm00028ab084240_P002 NA CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab084300 Zm00028ab084300_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab084300 Zm00028ab084300_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab084320 Zm00028ab084320_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab084320 Zm00028ab084320_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab084530 Zm00028ab084530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084700 Zm00028ab084700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084700 Zm00028ab084700_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084700 Zm00028ab084700_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084700 Zm00028ab084700_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084700 Zm00028ab084700_P005 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab084710 Zm00028ab084710_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab084710 Zm00028ab084710_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab084710 Zm00028ab084710_P003 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab084710 Zm00028ab084710_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab084770 Zm00028ab084770_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab084770 Zm00028ab084770_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab084770 Zm00028ab084770_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab084770 Zm00028ab084770_P004 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab084830 Zm00028ab084830_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab084860 Zm00028ab084860_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab084860 Zm00028ab084860_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab084860 Zm00028ab084860_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084890 Zm00028ab084890_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084890 Zm00028ab084890_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084890 Zm00028ab084890_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084890 Zm00028ab084890_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084890 Zm00028ab084890_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084930 Zm00028ab084930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084930 Zm00028ab084930_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084930 Zm00028ab084930_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab084970 Zm00028ab084970_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab085030 Zm00028ab085030_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab085170 Zm00028ab085170_P001 NA PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab085180 Zm00028ab085180_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab085180 Zm00028ab085180_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab085180 Zm00028ab085180_P003 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab085180 Zm00028ab085180_P004 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab085240 Zm00028ab085240_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab085250 Zm00028ab085250_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab085260 Zm00028ab085260_P001 ubiquitous PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab085290 Zm00028ab085290_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab085290 Zm00028ab085290_P003 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab085290 Zm00028ab085290_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab085290 Zm00028ab085290_P004 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab085410 Zm00028ab085410_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab085490 Zm00028ab085490_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab085490 Zm00028ab085490_P001 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab085800 Zm00028ab085800_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab085860 Zm00028ab085860_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab085860 Zm00028ab085860_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab085930 Zm00028ab085930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab085940 Zm00028ab085940_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab086250 Zm00028ab086250_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab086250 Zm00028ab086250_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab086250 Zm00028ab086250_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab086250 Zm00028ab086250_P004 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab086250 Zm00028ab086250_P005 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab086260 Zm00028ab086260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab086260 Zm00028ab086260_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab086260 Zm00028ab086260_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab086330 Zm00028ab086330_P001 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00028ab086400 Zm00028ab086400_P001 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab086510 Zm00028ab086510_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab086510 Zm00028ab086510_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab086510 Zm00028ab086510_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab086510 Zm00028ab086510_P004 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab086570 Zm00028ab086570_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab086570 Zm00028ab086570_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab086570 Zm00028ab086570_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab086580 Zm00028ab086580_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab086580 Zm00028ab086580_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab086580 Zm00028ab086580_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab086580 Zm00028ab086580_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab086830 Zm00028ab086830_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab086970 Zm00028ab086970_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab087040 Zm00028ab087040_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab087040 Zm00028ab087040_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab087060 Zm00028ab087060_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab087060 Zm00028ab087060_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab087060 Zm00028ab087060_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab087090 Zm00028ab087090_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab087090 Zm00028ab087090_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab087350 Zm00028ab087350_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab087480 Zm00028ab087480_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab087480 Zm00028ab087480_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab087480 Zm00028ab087480_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab087480 Zm00028ab087480_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab087510 Zm00028ab087510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab087610 Zm00028ab087610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab087610 Zm00028ab087610_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab087660 Zm00028ab087660_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab087710 Zm00028ab087710_P001 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab087910 Zm00028ab087910_P001 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab087920 Zm00028ab087920_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab087920 Zm00028ab087920_P001 expected PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab088150 Zm00028ab088150_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab088300 Zm00028ab088300_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab088300 Zm00028ab088300_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00028ab088360 Zm00028ab088360_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab088360 Zm00028ab088360_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab088360 Zm00028ab088360_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab088460 Zm00028ab088460_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab088460 Zm00028ab088460_P002 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab088560 Zm00028ab088560_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab088780 Zm00028ab088780_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab088780 Zm00028ab088780_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab088860 Zm00028ab088860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab088860 Zm00028ab088860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab088860 Zm00028ab088860_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab088930 Zm00028ab088930_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab089060 Zm00028ab089060_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab089240 Zm00028ab089240_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab089240 Zm00028ab089240_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab089240 Zm00028ab089240_P001 expected PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00028ab089260 Zm00028ab089260_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00028ab089260 Zm00028ab089260_P001 conditional PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00028ab089470 Zm00028ab089470_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00028ab089470 Zm00028ab089470_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab089640 Zm00028ab089640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab089660 Zm00028ab089660_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab089710 Zm00028ab089710_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab089710 Zm00028ab089710_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab089780 Zm00028ab089780_P004 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab089800 Zm00028ab089800_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab089800 Zm00028ab089800_P002 ubiquitous PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab089810 Zm00028ab089810_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab089860 Zm00028ab089860_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab090010 Zm00028ab090010_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab090010 Zm00028ab090010_P001 NA ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P001 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P001 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P002 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P002 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab090160 Zm00028ab090160_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab090160 Zm00028ab090160_P003 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P003 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P003 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P004 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00028ab090160 Zm00028ab090160_P004 ubiquitous PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab090330 Zm00028ab090330_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P003 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P004 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab090430 Zm00028ab090430_P004 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab090470 Zm00028ab090470_P002 NA PWY-3041 monoterpene biosynthesis RXN-5109 EC-4.2.3.106 Zm00028ab091020 Zm00028ab091020_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab091150 Zm00028ab091150_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab091150 Zm00028ab091150_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab091150 Zm00028ab091150_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab091150 Zm00028ab091150_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab091190 Zm00028ab091190_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab091610 Zm00028ab091610_P002 NA ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab091730 Zm00028ab091730_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab091730 Zm00028ab091730_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab091890 Zm00028ab091890_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab092020 Zm00028ab092020_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab092040 Zm00028ab092040_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab092040 Zm00028ab092040_P001 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab092210 Zm00028ab092210_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab092210 Zm00028ab092210_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab092590 Zm00028ab092590_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab092590 Zm00028ab092590_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab092590 Zm00028ab092590_P005 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab092680 Zm00028ab092680_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab092730 Zm00028ab092730_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab092730 Zm00028ab092730_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab092730 Zm00028ab092730_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab092730 Zm00028ab092730_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab092760 Zm00028ab092760_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab092770 Zm00028ab092770_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab092770 Zm00028ab092770_P002 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab093310 Zm00028ab093310_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab093310 Zm00028ab093310_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab093350 Zm00028ab093350_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab093350 Zm00028ab093350_P001 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab093450 Zm00028ab093450_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab093560 Zm00028ab093560_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab093560 Zm00028ab093560_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab093570 Zm00028ab093570_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab093570 Zm00028ab093570_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P002 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P003 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P003 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P004 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab094200 Zm00028ab094200_P004 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab094320 Zm00028ab094320_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab094320 Zm00028ab094320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab094320 Zm00028ab094320_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab094320 Zm00028ab094320_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab094630 Zm00028ab094630_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab094630 Zm00028ab094630_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab094630 Zm00028ab094630_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab094630 Zm00028ab094630_P002 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab094640 Zm00028ab094640_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00028ab094650 Zm00028ab094650_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab094700 Zm00028ab094700_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P003 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P003 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P004 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P004 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P004 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P005 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P005 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P005 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab094870 Zm00028ab094870_P005 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab095180 Zm00028ab095180_P003 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab095210 Zm00028ab095210_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab095210 Zm00028ab095210_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab095210 Zm00028ab095210_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab095210 Zm00028ab095210_P004 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab095210 Zm00028ab095210_P005 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab095280 Zm00028ab095280_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab095280 Zm00028ab095280_P002 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab095440 Zm00028ab095440_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab095870 Zm00028ab095870_P001 viridiplantae PWY-5530 sorbitol biosynthesis II 1.1.99.28-RXN EC-1.1.99.28 Zm00028ab096290 Zm00028ab096290_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab096350 Zm00028ab096350_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab096360 Zm00028ab096360_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab096370 Zm00028ab096370_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab096370 Zm00028ab096370_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab096370 Zm00028ab096370_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab096370 Zm00028ab096370_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab096400 Zm00028ab096400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab096400 Zm00028ab096400_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P001 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P002 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P002 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P003 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P003 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00028ab096410 Zm00028ab096410_P003 excluded BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab096430 Zm00028ab096430_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab096510 Zm00028ab096510_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab096510 Zm00028ab096510_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab096510 Zm00028ab096510_P003 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab096510 Zm00028ab096510_P004 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab096510 Zm00028ab096510_P005 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab096540 Zm00028ab096540_P001 conditional PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096640 Zm00028ab096640_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096640 Zm00028ab096640_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096640 Zm00028ab096640_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096640 Zm00028ab096640_P004 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096640 Zm00028ab096640_P005 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab096650 Zm00028ab096650_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab096690 Zm00028ab096690_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab096710 Zm00028ab096710_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab097090 Zm00028ab097090_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab097210 Zm00028ab097210_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab097210 Zm00028ab097210_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab097210 Zm00028ab097210_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab097230 Zm00028ab097230_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab097230 Zm00028ab097230_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab097230 Zm00028ab097230_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab097460 Zm00028ab097460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab097460 Zm00028ab097460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab097460 Zm00028ab097460_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab097500 Zm00028ab097500_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab097500 Zm00028ab097500_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab097560 Zm00028ab097560_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab097650 Zm00028ab097650_P001 NA PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab097730 Zm00028ab097730_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab097730 Zm00028ab097730_P002 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab097850 Zm00028ab097850_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab097850 Zm00028ab097850_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab097850 Zm00028ab097850_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab097860 Zm00028ab097860_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab097860 Zm00028ab097860_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab097860 Zm00028ab097860_P001 NA PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P001 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P001 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P002 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P002 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P003 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P003 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P004 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P004 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P005 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P005 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P006 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P006 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P006 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00028ab097940 Zm00028ab097940_P006 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab097970 Zm00028ab097970_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab098010 Zm00028ab098010_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab098030 Zm00028ab098030_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098240 Zm00028ab098240_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab098250 Zm00028ab098250_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P005 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P005 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P005 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P006 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P006 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P006 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab098310 Zm00028ab098310_P006 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab098610 Zm00028ab098610_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab098610 Zm00028ab098610_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab098640 Zm00028ab098640_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab098640 Zm00028ab098640_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab098640 Zm00028ab098640_P003 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab098710 Zm00028ab098710_P001 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab098720 Zm00028ab098720_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab098720 Zm00028ab098720_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab098720 Zm00028ab098720_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab098720 Zm00028ab098720_P004 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab098740 Zm00028ab098740_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab098770 Zm00028ab098770_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab098920 Zm00028ab098920_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab098920 Zm00028ab098920_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab098920 Zm00028ab098920_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab098990 Zm00028ab098990_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab099000 Zm00028ab099000_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab099030 Zm00028ab099030_P005 ubiquitous SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab099060 Zm00028ab099060_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab099060 Zm00028ab099060_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab099060 Zm00028ab099060_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab099060 Zm00028ab099060_P004 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab099060 Zm00028ab099060_P005 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab099060 Zm00028ab099060_P006 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab099060 Zm00028ab099060_P007 NA HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab099490 Zm00028ab099490_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab099490 Zm00028ab099490_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab099490 Zm00028ab099490_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab099490 Zm00028ab099490_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab099490 Zm00028ab099490_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P005 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab099490 Zm00028ab099490_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab099560 Zm00028ab099560_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab099560 Zm00028ab099560_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab099560 Zm00028ab099560_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab099560 Zm00028ab099560_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab099620 Zm00028ab099620_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab099720 Zm00028ab099720_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab099720 Zm00028ab099720_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab099720 Zm00028ab099720_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P006 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab099830 Zm00028ab099830_P007 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab099920 Zm00028ab099920_P002 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab099970 Zm00028ab099970_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab099970 Zm00028ab099970_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab099970 Zm00028ab099970_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab099970 Zm00028ab099970_P001 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab099980 Zm00028ab099980_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab100040 Zm00028ab100040_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab100040 Zm00028ab100040_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab100050 Zm00028ab100050_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab100050 Zm00028ab100050_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab100060 Zm00028ab100060_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab100060 Zm00028ab100060_P001 ubiquitous PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab100110 Zm00028ab100110_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab100110 Zm00028ab100110_P002 excluded PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100160 Zm00028ab100160_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00028ab100210 Zm00028ab100210_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00028ab100210 Zm00028ab100210_P002 viridiplantae PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00028ab100220 Zm00028ab100220_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab100310 Zm00028ab100310_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab100310 Zm00028ab100310_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab100310 Zm00028ab100310_P003 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab100340 Zm00028ab100340_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab100480 Zm00028ab100480_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab100480 Zm00028ab100480_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab100480 Zm00028ab100480_P003 NA TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab100610 Zm00028ab100610_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab100610 Zm00028ab100610_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab100690 Zm00028ab100690_P002 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab100810 Zm00028ab100810_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab100950 Zm00028ab100950_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab100950 Zm00028ab100950_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab100950 Zm00028ab100950_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab100950 Zm00028ab100950_P002 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100960 Zm00028ab100960_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab100970 Zm00028ab100970_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab101100 Zm00028ab101100_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab101100 Zm00028ab101100_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab101100 Zm00028ab101100_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab101490 Zm00028ab101490_P005 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab101610 Zm00028ab101610_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab101610 Zm00028ab101610_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab101610 Zm00028ab101610_P001 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab101670 Zm00028ab101670_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab101670 Zm00028ab101670_P002 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab101700 Zm00028ab101700_P002 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P002 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P003 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P004 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab102000 Zm00028ab102000_P004 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab102260 Zm00028ab102260_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab102320 Zm00028ab102320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab102320 Zm00028ab102320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab102320 Zm00028ab102320_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab102330 Zm00028ab102330_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab102330 Zm00028ab102330_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab102410 Zm00028ab102410_P005 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab102470 Zm00028ab102470_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab102470 Zm00028ab102470_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab102470 Zm00028ab102470_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab102470 Zm00028ab102470_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102910 Zm00028ab102910_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102910 Zm00028ab102910_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102910 Zm00028ab102910_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102940 Zm00028ab102940_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab102950 Zm00028ab102950_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab102960 Zm00028ab102960_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab102960 Zm00028ab102960_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab102960 Zm00028ab102960_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab102960 Zm00028ab102960_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab103040 Zm00028ab103040_P003 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab103080 Zm00028ab103080_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab103150 Zm00028ab103150_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab103150 Zm00028ab103150_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab103300 Zm00028ab103300_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab103300 Zm00028ab103300_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab103300 Zm00028ab103300_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab103300 Zm00028ab103300_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab103310 Zm00028ab103310_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab103310 Zm00028ab103310_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab103480 Zm00028ab103480_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab103480 Zm00028ab103480_P001 expected LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab103620 Zm00028ab103620_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab103620 Zm00028ab103620_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab103650 Zm00028ab103650_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab103650 Zm00028ab103650_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab103650 Zm00028ab103650_P003 expected PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab103740 Zm00028ab103740_P004 NA PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab104050 Zm00028ab104050_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab104070 Zm00028ab104070_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab104250 Zm00028ab104250_P005 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab104260 Zm00028ab104260_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab104260 Zm00028ab104260_P001 excluded PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab104370 Zm00028ab104370_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab104400 Zm00028ab104400_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab104400 Zm00028ab104400_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab104400 Zm00028ab104400_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab104400 Zm00028ab104400_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab104400 Zm00028ab104400_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab104400 Zm00028ab104400_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab104400 Zm00028ab104400_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab104400 Zm00028ab104400_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab104480 Zm00028ab104480_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab104480 Zm00028ab104480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab104480 Zm00028ab104480_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab104620 Zm00028ab104620_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab104620 Zm00028ab104620_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab104790 Zm00028ab104790_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab104790 Zm00028ab104790_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab104900 Zm00028ab104900_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab104900 Zm00028ab104900_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab104900 Zm00028ab104900_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab105020 Zm00028ab105020_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab105020 Zm00028ab105020_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab105020 Zm00028ab105020_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab105020 Zm00028ab105020_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab105020 Zm00028ab105020_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab105030 Zm00028ab105030_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab105030 Zm00028ab105030_P002 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab105160 Zm00028ab105160_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab105160 Zm00028ab105160_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab105160 Zm00028ab105160_P003 ubiquitous OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab105440 Zm00028ab105440_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab105580 Zm00028ab105580_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab105580 Zm00028ab105580_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab105580 Zm00028ab105580_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab105720 Zm00028ab105720_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab105720 Zm00028ab105720_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab105720 Zm00028ab105720_P003 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab105830 Zm00028ab105830_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab105920 Zm00028ab105920_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab105920 Zm00028ab105920_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab105920 Zm00028ab105920_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab105920 Zm00028ab105920_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00028ab106010 Zm00028ab106010_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00028ab106010 Zm00028ab106010_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00028ab106010 Zm00028ab106010_P003 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab106170 Zm00028ab106170_P003 ubiquitous PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab106220 Zm00028ab106220_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab106220 Zm00028ab106220_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab106220 Zm00028ab106220_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab106220 Zm00028ab106220_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab106220 Zm00028ab106220_P001 excluded PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab106250 Zm00028ab106250_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab106250 Zm00028ab106250_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab106250 Zm00028ab106250_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab106250 Zm00028ab106250_P002 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P001 excluded PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P002 excluded PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P003 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P003 excluded PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P004 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab106530 Zm00028ab106530_P004 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab106680 Zm00028ab106680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab106680 Zm00028ab106680_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab106680 Zm00028ab106680_P003 NA HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab106800 Zm00028ab106800_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106880 Zm00028ab106880_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106880 Zm00028ab106880_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106890 Zm00028ab106890_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106890 Zm00028ab106890_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106900 Zm00028ab106900_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab106900 Zm00028ab106900_P002 excluded PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab107130 Zm00028ab107130_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab107130 Zm00028ab107130_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab107210 Zm00028ab107210_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab107210 Zm00028ab107210_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab107210 Zm00028ab107210_P003 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab107260 Zm00028ab107260_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab107260 Zm00028ab107260_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab107260 Zm00028ab107260_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab107270 Zm00028ab107270_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab107270 Zm00028ab107270_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab107270 Zm00028ab107270_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab107270 Zm00028ab107270_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab107270 Zm00028ab107270_P005 expected PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab107380 Zm00028ab107380_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab107380 Zm00028ab107380_P001 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab107740 Zm00028ab107740_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab107740 Zm00028ab107740_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab107800 Zm00028ab107800_P001 conditional SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab108020 Zm00028ab108020_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab108020 Zm00028ab108020_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab108020 Zm00028ab108020_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab108020 Zm00028ab108020_P002 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab108310 Zm00028ab108310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab108310 Zm00028ab108310_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab108620 Zm00028ab108620_P005 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab108880 Zm00028ab108880_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab109060 Zm00028ab109060_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P004 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P005 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab109140 Zm00028ab109140_P005 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab109280 Zm00028ab109280_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P005 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P005 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab109550 Zm00028ab109550_P005 NA PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab109610 Zm00028ab109610_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab109720 Zm00028ab109720_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab109720 Zm00028ab109720_P002 expected PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab109730 Zm00028ab109730_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab109730 Zm00028ab109730_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab109730 Zm00028ab109730_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab109730 Zm00028ab109730_P002 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab109790 Zm00028ab109790_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab109790 Zm00028ab109790_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab109790 Zm00028ab109790_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab109790 Zm00028ab109790_P002 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab109860 Zm00028ab109860_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab109860 Zm00028ab109860_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab109860 Zm00028ab109860_P003 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab109860 Zm00028ab109860_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab109900 Zm00028ab109900_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P002 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P002 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab109900 Zm00028ab109900_P002 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab109900 Zm00028ab109900_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab109900 Zm00028ab109900_P002 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab109920 Zm00028ab109920_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab109920 Zm00028ab109920_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab109960 Zm00028ab109960_P001 expected PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P002 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P002 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P002 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab110000 Zm00028ab110000_P002 NA PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab110010 Zm00028ab110010_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab110090 Zm00028ab110090_P001 NA CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab110220 Zm00028ab110220_P002 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00028ab110320 Zm00028ab110320_P001 conditional PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00028ab110320 Zm00028ab110320_P002 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab110690 Zm00028ab110690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00028ab110690 Zm00028ab110690_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab110910 Zm00028ab110910_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab110910 Zm00028ab110910_P004 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab111210 Zm00028ab111210_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab111260 Zm00028ab111260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab111260 Zm00028ab111260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab111260 Zm00028ab111260_P001 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab111430 Zm00028ab111430_P001 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab111460 Zm00028ab111460_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab111460 Zm00028ab111460_P003 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab111470 Zm00028ab111470_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab111470 Zm00028ab111470_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab111470 Zm00028ab111470_P003 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab111530 Zm00028ab111530_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab111570 Zm00028ab111570_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab111570 Zm00028ab111570_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P004 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P005 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P005 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P006 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab111650 Zm00028ab111650_P006 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P005 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P006 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00028ab111660 Zm00028ab111660_P007 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab111750 Zm00028ab111750_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab111750 Zm00028ab111750_P002 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab111870 Zm00028ab111870_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab111950 Zm00028ab111950_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab112030 Zm00028ab112030_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab112040 Zm00028ab112040_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab112040 Zm00028ab112040_P001 expected LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab112040 Zm00028ab112040_P002 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00028ab112040 Zm00028ab112040_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab112100 Zm00028ab112100_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112100 Zm00028ab112100_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112100 Zm00028ab112100_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab112110 Zm00028ab112110_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112110 Zm00028ab112110_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112110 Zm00028ab112110_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab112120 Zm00028ab112120_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112120 Zm00028ab112120_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab112120 Zm00028ab112120_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab112180 Zm00028ab112180_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab112200 Zm00028ab112200_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab112910 Zm00028ab112910_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab112940 Zm00028ab112940_P005 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab112990 Zm00028ab112990_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00028ab113030 Zm00028ab113030_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00028ab113030 Zm00028ab113030_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00028ab113030 Zm00028ab113030_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab113090 Zm00028ab113090_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab113200 Zm00028ab113200_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab113200 Zm00028ab113200_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab113600 Zm00028ab113600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab113600 Zm00028ab113600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab113600 Zm00028ab113600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab113610 Zm00028ab113610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab113610 Zm00028ab113610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab113610 Zm00028ab113610_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab113820 Zm00028ab113820_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab113820 Zm00028ab113820_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab113840 Zm00028ab113840_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab113950 Zm00028ab113950_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab113950 Zm00028ab113950_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab113950 Zm00028ab113950_P001 excluded PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab114090 Zm00028ab114090_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab114090 Zm00028ab114090_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab114090 Zm00028ab114090_P001 ubiquitous PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab114130 Zm00028ab114130_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab114130 Zm00028ab114130_P002 conditional PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P002 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P003 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P003 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P003 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab114180 Zm00028ab114180_P003 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab114190 Zm00028ab114190_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab114200 Zm00028ab114200_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab114240 Zm00028ab114240_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab114420 Zm00028ab114420_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab114420 Zm00028ab114420_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab114420 Zm00028ab114420_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab114430 Zm00028ab114430_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab114430 Zm00028ab114430_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab114430 Zm00028ab114430_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab114610 Zm00028ab114610_P001 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab114640 Zm00028ab114640_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab114740 Zm00028ab114740_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab114780 Zm00028ab114780_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab114780 Zm00028ab114780_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab114780 Zm00028ab114780_P003 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab114790 Zm00028ab114790_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab114790 Zm00028ab114790_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab114790 Zm00028ab114790_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab114790 Zm00028ab114790_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab114870 Zm00028ab114870_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab114910 Zm00028ab114910_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab114910 Zm00028ab114910_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab115110 Zm00028ab115110_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab115250 Zm00028ab115250_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab115260 Zm00028ab115260_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab115260 Zm00028ab115260_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab115260 Zm00028ab115260_P001 NA PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00028ab115270 Zm00028ab115270_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00028ab115270 Zm00028ab115270_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab115290 Zm00028ab115290_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00028ab115360 Zm00028ab115360_P001 expected PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00028ab115360 Zm00028ab115360_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab115450 Zm00028ab115450_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab115450 Zm00028ab115450_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab115700 Zm00028ab115700_P002 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab116150 Zm00028ab116150_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab116340 Zm00028ab116340_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab116340 Zm00028ab116340_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab116510 Zm00028ab116510_P002 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab116550 Zm00028ab116550_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab116550 Zm00028ab116550_P002 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab116630 Zm00028ab116630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab116630 Zm00028ab116630_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab116660 Zm00028ab116660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab116660 Zm00028ab116660_P002 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab116870 Zm00028ab116870_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab116870 Zm00028ab116870_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab116880 Zm00028ab116880_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab116970 Zm00028ab116970_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab116970 Zm00028ab116970_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab116970 Zm00028ab116970_P003 expected UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab117210 Zm00028ab117210_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab117320 Zm00028ab117320_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117320 Zm00028ab117320_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab117320 Zm00028ab117320_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117320 Zm00028ab117320_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab117370 Zm00028ab117370_P004 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab117520 Zm00028ab117520_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab117520 Zm00028ab117520_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab117520 Zm00028ab117520_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab117520 Zm00028ab117520_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab117520 Zm00028ab117520_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab117600 Zm00028ab117600_P003 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab117640 Zm00028ab117640_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab117640 Zm00028ab117640_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117710 Zm00028ab117710_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117760 Zm00028ab117760_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117760 Zm00028ab117760_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117760 Zm00028ab117760_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117790 Zm00028ab117790_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117810 Zm00028ab117810_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117810 Zm00028ab117810_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117810 Zm00028ab117810_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117830 Zm00028ab117830_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117830 Zm00028ab117830_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117830 Zm00028ab117830_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117840 Zm00028ab117840_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117840 Zm00028ab117840_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117840 Zm00028ab117840_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117890 Zm00028ab117890_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117890 Zm00028ab117890_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117890 Zm00028ab117890_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117900 Zm00028ab117900_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab117900 Zm00028ab117900_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab117900 Zm00028ab117900_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab118100 Zm00028ab118100_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab118100 Zm00028ab118100_P001 viridiplantae PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00028ab118120 Zm00028ab118120_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00028ab118120 Zm00028ab118120_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00028ab118140 Zm00028ab118140_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00028ab118140 Zm00028ab118140_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab118230 Zm00028ab118230_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab118230 Zm00028ab118230_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab118230 Zm00028ab118230_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab118230 Zm00028ab118230_P001 NA PWY-401 galactolipid biosynthesis I RXN-1226 EC-2.4.1.184 Zm00028ab118280 Zm00028ab118280_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab118280 Zm00028ab118280_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab118280 Zm00028ab118280_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab118280 Zm00028ab118280_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab118280 Zm00028ab118280_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab118280 Zm00028ab118280_P006 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab118420 Zm00028ab118420_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab118420 Zm00028ab118420_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab118420 Zm00028ab118420_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab118420 Zm00028ab118420_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab118420 Zm00028ab118420_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P004 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P005 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118480 Zm00028ab118480_P005 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab118540 Zm00028ab118540_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab118540 Zm00028ab118540_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00028ab118580 Zm00028ab118580_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab118960 Zm00028ab118960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab119450 Zm00028ab119450_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab119490 Zm00028ab119490_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab119490 Zm00028ab119490_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab119520 Zm00028ab119520_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab119520 Zm00028ab119520_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab119570 Zm00028ab119570_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab119670 Zm00028ab119670_P001 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00028ab119670 Zm00028ab119670_P001 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00028ab119670 Zm00028ab119670_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab119680 Zm00028ab119680_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab119680 Zm00028ab119680_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab119680 Zm00028ab119680_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab119690 Zm00028ab119690_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab119690 Zm00028ab119690_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab119690 Zm00028ab119690_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab119850 Zm00028ab119850_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab119850 Zm00028ab119850_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab119950 Zm00028ab119950_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab119970 Zm00028ab119970_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab120000 Zm00028ab120000_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab120000 Zm00028ab120000_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab120000 Zm00028ab120000_P003 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00028ab120040 Zm00028ab120040_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab120040 Zm00028ab120040_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00028ab120040 Zm00028ab120040_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab120370 Zm00028ab120370_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab120510 Zm00028ab120510_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab120510 Zm00028ab120510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab120510 Zm00028ab120510_P001 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00028ab120570 Zm00028ab120570_P001 ubiquitous PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00028ab120640 Zm00028ab120640_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00028ab120640 Zm00028ab120640_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00028ab120640 Zm00028ab120640_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab120640 Zm00028ab120640_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab120640 Zm00028ab120640_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab120640 Zm00028ab120640_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab120640 Zm00028ab120640_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab120640 Zm00028ab120640_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab120640 Zm00028ab120640_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab120640 Zm00028ab120640_P001 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab120650 Zm00028ab120650_P001 conditional PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab121210 Zm00028ab121210_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab121210 Zm00028ab121210_P001 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab121210 Zm00028ab121210_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab121210 Zm00028ab121210_P002 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab121220 Zm00028ab121220_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab121220 Zm00028ab121220_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab121340 Zm00028ab121340_P001 NA PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab121600 Zm00028ab121600_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab121670 Zm00028ab121670_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab121760 Zm00028ab121760_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab121880 Zm00028ab121880_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab121880 Zm00028ab121880_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab121910 Zm00028ab121910_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab121910 Zm00028ab121910_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab121910 Zm00028ab121910_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab121960 Zm00028ab121960_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab121960 Zm00028ab121960_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab121960 Zm00028ab121960_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab122200 Zm00028ab122200_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab122210 Zm00028ab122210_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab122210 Zm00028ab122210_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab122210 Zm00028ab122210_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00028ab122230 Zm00028ab122230_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00028ab122230 Zm00028ab122230_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab122350 Zm00028ab122350_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab122350 Zm00028ab122350_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab122350 Zm00028ab122350_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab122360 Zm00028ab122360_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab122360 Zm00028ab122360_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab122360 Zm00028ab122360_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4243 EC-1.14.19.41 Zm00028ab122560 Zm00028ab122560_P001 ubiquitous PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab122630 Zm00028ab122630_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab122630 Zm00028ab122630_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab122660 Zm00028ab122660_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab122710 Zm00028ab122710_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab122710 Zm00028ab122710_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab122710 Zm00028ab122710_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab122710 Zm00028ab122710_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab122710 Zm00028ab122710_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab122710 Zm00028ab122710_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab122780 Zm00028ab122780_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab122780 Zm00028ab122780_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab122780 Zm00028ab122780_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab122820 Zm00028ab122820_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab122820 Zm00028ab122820_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab122820 Zm00028ab122820_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab122820 Zm00028ab122820_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab122830 Zm00028ab122830_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab122830 Zm00028ab122830_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab122830 Zm00028ab122830_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00028ab122880 Zm00028ab122880_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00028ab122880 Zm00028ab122880_P002 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab123210 Zm00028ab123210_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab123210 Zm00028ab123210_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab123260 Zm00028ab123260_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab123370 Zm00028ab123370_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab123550 Zm00028ab123550_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab123550 Zm00028ab123550_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab123550 Zm00028ab123550_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab123550 Zm00028ab123550_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab123720 Zm00028ab123720_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab123720 Zm00028ab123720_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab123720 Zm00028ab123720_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab123770 Zm00028ab123770_P005 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab123810 Zm00028ab123810_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab123830 Zm00028ab123830_P003 manual PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab123850 Zm00028ab123850_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab123850 Zm00028ab123850_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab123850 Zm00028ab123850_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab123850 Zm00028ab123850_P004 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab124000 Zm00028ab124000_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab124000 Zm00028ab124000_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab124300 Zm00028ab124300_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab124300 Zm00028ab124300_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab124720 Zm00028ab124720_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab124720 Zm00028ab124720_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab124720 Zm00028ab124720_P003 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab124900 Zm00028ab124900_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124900 Zm00028ab124900_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab124900 Zm00028ab124900_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124910 Zm00028ab124910_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124910 Zm00028ab124910_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124910 Zm00028ab124910_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124910 Zm00028ab124910_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab124910 Zm00028ab124910_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab124910 Zm00028ab124910_P001 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab124960 Zm00028ab124960_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab124960 Zm00028ab124960_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab125040 Zm00028ab125040_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab125060 Zm00028ab125060_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab125060 Zm00028ab125060_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab125080 Zm00028ab125080_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab125080 Zm00028ab125080_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab125090 Zm00028ab125090_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab125090 Zm00028ab125090_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab125140 Zm00028ab125140_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab125140 Zm00028ab125140_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab125140 Zm00028ab125140_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab125240 Zm00028ab125240_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab125240 Zm00028ab125240_P002 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab125320 Zm00028ab125320_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P009 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P010 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P010 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab125330 Zm00028ab125330_P010 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5466 EC-2.4.1.258 Zm00028ab125360 Zm00028ab125360_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab125460 Zm00028ab125460_P001 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab125510 Zm00028ab125510_P002 conditional PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00028ab125580 Zm00028ab125580_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00028ab125580 Zm00028ab125580_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00028ab125580 Zm00028ab125580_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00028ab125580 Zm00028ab125580_P002 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00028ab125600 Zm00028ab125600_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab125730 Zm00028ab125730_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab125760 Zm00028ab125760_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab126020 Zm00028ab126020_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab126020 Zm00028ab126020_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab126020 Zm00028ab126020_P001 NA PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab126070 Zm00028ab126070_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab126120 Zm00028ab126120_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab126120 Zm00028ab126120_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab126120 Zm00028ab126120_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab126120 Zm00028ab126120_P001 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab126250 Zm00028ab126250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab126250 Zm00028ab126250_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab126250 Zm00028ab126250_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab126250 Zm00028ab126250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab126250 Zm00028ab126250_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab126270 Zm00028ab126270_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab126390 Zm00028ab126390_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab126390 Zm00028ab126390_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab126390 Zm00028ab126390_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab126410 Zm00028ab126410_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab126410 Zm00028ab126410_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab126410 Zm00028ab126410_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab126670 Zm00028ab126670_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126690 Zm00028ab126690_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126690 Zm00028ab126690_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126690 Zm00028ab126690_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126690 Zm00028ab126690_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126770 Zm00028ab126770_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab126780 Zm00028ab126780_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P005 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P005 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P005 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P006 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P006 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab126840 Zm00028ab126840_P006 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab126880 Zm00028ab126880_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab126880 Zm00028ab126880_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab126930 Zm00028ab126930_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab126930 Zm00028ab126930_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab126930 Zm00028ab126930_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00028ab126950 Zm00028ab126950_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00028ab126950 Zm00028ab126950_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00028ab126950 Zm00028ab126950_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab127030 Zm00028ab127030_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab127090 Zm00028ab127090_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127770 Zm00028ab127770_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127770 Zm00028ab127770_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127770 Zm00028ab127770_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127770 Zm00028ab127770_P004 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P005 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P006 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P006 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P006 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127780 Zm00028ab127780_P006 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127800 Zm00028ab127800_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127800 Zm00028ab127800_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127800 Zm00028ab127800_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127800 Zm00028ab127800_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127810 Zm00028ab127810_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127810 Zm00028ab127810_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127810 Zm00028ab127810_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127810 Zm00028ab127810_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127820 Zm00028ab127820_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127820 Zm00028ab127820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127820 Zm00028ab127820_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127820 Zm00028ab127820_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab127830 Zm00028ab127830_P003 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab127860 Zm00028ab127860_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127870 Zm00028ab127870_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab127870 Zm00028ab127870_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab127900 Zm00028ab127900_P001 viridiplantae PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00028ab127910 Zm00028ab127910_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00028ab127910 Zm00028ab127910_P001 ubiquitous PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00028ab127910 Zm00028ab127910_P002 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00028ab127910 Zm00028ab127910_P002 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab128010 Zm00028ab128010_P004 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab128010 Zm00028ab128010_P005 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab128250 Zm00028ab128250_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab128250 Zm00028ab128250_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab128250 Zm00028ab128250_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab128250 Zm00028ab128250_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab128250 Zm00028ab128250_P005 conditional PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab128400 Zm00028ab128400_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab128610 Zm00028ab128610_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab128810 Zm00028ab128810_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab128860 Zm00028ab128860_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab128890 Zm00028ab128890_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab128890 Zm00028ab128890_P001 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab128930 Zm00028ab128930_P002 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab129030 Zm00028ab129030_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab129240 Zm00028ab129240_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab129290 Zm00028ab129290_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab129300 Zm00028ab129300_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab129430 Zm00028ab129430_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab129500 Zm00028ab129500_P003 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab129530 Zm00028ab129530_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab129530 Zm00028ab129530_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab129530 Zm00028ab129530_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab129610 Zm00028ab129610_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab129610 Zm00028ab129610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab129610 Zm00028ab129610_P001 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab129730 Zm00028ab129730_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab129740 Zm00028ab129740_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab129800 Zm00028ab129800_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P004 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P005 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P006 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab129910 Zm00028ab129910_P007 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab129940 Zm00028ab129940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab129940 Zm00028ab129940_P002 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab130010 Zm00028ab130010_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab130010 Zm00028ab130010_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab130010 Zm00028ab130010_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab130010 Zm00028ab130010_P002 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab130020 Zm00028ab130020_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab130020 Zm00028ab130020_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab130020 Zm00028ab130020_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab130020 Zm00028ab130020_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab130040 Zm00028ab130040_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab130040 Zm00028ab130040_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab130040 Zm00028ab130040_P003 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab130040 Zm00028ab130040_P004 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab130140 Zm00028ab130140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab130140 Zm00028ab130140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab130140 Zm00028ab130140_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab130140 Zm00028ab130140_P002 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab130310 Zm00028ab130310_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab130310 Zm00028ab130310_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab130370 Zm00028ab130370_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab130570 Zm00028ab130570_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab130570 Zm00028ab130570_P002 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab130710 Zm00028ab130710_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab130750 Zm00028ab130750_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab131170 Zm00028ab131170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab131170 Zm00028ab131170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab131170 Zm00028ab131170_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00028ab131210 Zm00028ab131210_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00028ab131210 Zm00028ab131210_P002 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab131290 Zm00028ab131290_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab131340 Zm00028ab131340_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab131340 Zm00028ab131340_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab131340 Zm00028ab131340_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab131480 Zm00028ab131480_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab131480 Zm00028ab131480_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab131480 Zm00028ab131480_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab131480 Zm00028ab131480_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab131490 Zm00028ab131490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab131490 Zm00028ab131490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab131490 Zm00028ab131490_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab131670 Zm00028ab131670_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab131730 Zm00028ab131730_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab131730 Zm00028ab131730_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab131730 Zm00028ab131730_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab131730 Zm00028ab131730_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab131840 Zm00028ab131840_P001 expected PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab132290 Zm00028ab132290_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab132360 Zm00028ab132360_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab132360 Zm00028ab132360_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab132370 Zm00028ab132370_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab132370 Zm00028ab132370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab132390 Zm00028ab132390_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab132430 Zm00028ab132430_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab132430 Zm00028ab132430_P001 NA PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab132490 Zm00028ab132490_P001 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab132490 Zm00028ab132490_P002 conditional PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00028ab132550 Zm00028ab132550_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab132680 Zm00028ab132680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132680 Zm00028ab132680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132680 Zm00028ab132680_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab132690 Zm00028ab132690_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132690 Zm00028ab132690_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132690 Zm00028ab132690_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab132700 Zm00028ab132700_P002 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab132740 Zm00028ab132740_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab132840 Zm00028ab132840_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab132840 Zm00028ab132840_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab132860 Zm00028ab132860_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab132870 Zm00028ab132870_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab132870 Zm00028ab132870_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab132880 Zm00028ab132880_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00028ab132930 Zm00028ab132930_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab132950 Zm00028ab132950_P001 NA PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab132970 Zm00028ab132970_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab132970 Zm00028ab132970_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab132970 Zm00028ab132970_P003 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab133030 Zm00028ab133030_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab133050 Zm00028ab133050_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab133320 Zm00028ab133320_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab133600 Zm00028ab133600_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00028ab133610 Zm00028ab133610_P001 viridiplantae SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab133880 Zm00028ab133880_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab133900 Zm00028ab133900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133900 Zm00028ab133900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133900 Zm00028ab133900_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab133940 Zm00028ab133940_P002 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab134000 Zm00028ab134000_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab134000 Zm00028ab134000_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab134000 Zm00028ab134000_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab134000 Zm00028ab134000_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab134000 Zm00028ab134000_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab134100 Zm00028ab134100_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab134110 Zm00028ab134110_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P002 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P003 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P004 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab134640 Zm00028ab134640_P004 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab134740 Zm00028ab134740_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab134750 Zm00028ab134750_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab134750 Zm00028ab134750_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab134750 Zm00028ab134750_P004 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab134760 Zm00028ab134760_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab134850 Zm00028ab134850_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab134860 Zm00028ab134860_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab134920 Zm00028ab134920_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab134920 Zm00028ab134920_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab134930 Zm00028ab134930_P003 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab134950 Zm00028ab134950_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab135730 Zm00028ab135730_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab135920 Zm00028ab135920_P001 NA PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00028ab136440 Zm00028ab136440_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab136460 Zm00028ab136460_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab136590 Zm00028ab136590_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab136590 Zm00028ab136590_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab136590 Zm00028ab136590_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab136590 Zm00028ab136590_P004 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab136890 Zm00028ab136890_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab136890 Zm00028ab136890_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab136930 Zm00028ab136930_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab136930 Zm00028ab136930_P001 conditional GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00028ab137140 Zm00028ab137140_P004 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab137160 Zm00028ab137160_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab137160 Zm00028ab137160_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab137160 Zm00028ab137160_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab137240 Zm00028ab137240_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab137260 Zm00028ab137260_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab137260 Zm00028ab137260_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab137260 Zm00028ab137260_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab137380 Zm00028ab137380_P002 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab137540 Zm00028ab137540_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab137540 Zm00028ab137540_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00028ab137540 Zm00028ab137540_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab137590 Zm00028ab137590_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab137770 Zm00028ab137770_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab137810 Zm00028ab137810_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab137840 Zm00028ab137840_P001 conditional PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab137910 Zm00028ab137910_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab137910 Zm00028ab137910_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab138000 Zm00028ab138000_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab138000 Zm00028ab138000_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab138000 Zm00028ab138000_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab138000 Zm00028ab138000_P004 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab138070 Zm00028ab138070_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab138070 Zm00028ab138070_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab138070 Zm00028ab138070_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab138220 Zm00028ab138220_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab138520 Zm00028ab138520_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab138520 Zm00028ab138520_P001 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P003 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P004 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P005 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P005 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P006 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P006 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P007 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00028ab138600 Zm00028ab138600_P007 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab138640 Zm00028ab138640_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab138750 Zm00028ab138750_P001 expected PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab138890 Zm00028ab138890_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab138890 Zm00028ab138890_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab139000 Zm00028ab139000_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab139150 Zm00028ab139150_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab139150 Zm00028ab139150_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab139150 Zm00028ab139150_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab139150 Zm00028ab139150_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab139380 Zm00028ab139380_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab139380 Zm00028ab139380_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab139380 Zm00028ab139380_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab139380 Zm00028ab139380_P004 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab139580 Zm00028ab139580_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab139600 Zm00028ab139600_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P006 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P007 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00028ab139850 Zm00028ab139850_P008 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab139870 Zm00028ab139870_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab139870 Zm00028ab139870_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab139870 Zm00028ab139870_P001 expected PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab140060 Zm00028ab140060_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab140090 Zm00028ab140090_P002 NA PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab140250 Zm00028ab140250_P002 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab140270 Zm00028ab140270_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab140270 Zm00028ab140270_P001 excluded PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00028ab140360 Zm00028ab140360_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00028ab140360 Zm00028ab140360_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab140460 Zm00028ab140460_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab140460 Zm00028ab140460_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab140460 Zm00028ab140460_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab140460 Zm00028ab140460_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab140460 Zm00028ab140460_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab140650 Zm00028ab140650_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab140650 Zm00028ab140650_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab140710 Zm00028ab140710_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab140710 Zm00028ab140710_P002 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab140800 Zm00028ab140800_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab140800 Zm00028ab140800_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab140800 Zm00028ab140800_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab140800 Zm00028ab140800_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab140800 Zm00028ab140800_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab140820 Zm00028ab140820_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab140910 Zm00028ab140910_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab140910 Zm00028ab140910_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab140930 Zm00028ab140930_P004 NA PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab141040 Zm00028ab141040_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab141040 Zm00028ab141040_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab141040 Zm00028ab141040_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab141040 Zm00028ab141040_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab141040 Zm00028ab141040_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab141040 Zm00028ab141040_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab141040 Zm00028ab141040_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab141040 Zm00028ab141040_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab141040 Zm00028ab141040_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab141040 Zm00028ab141040_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab141040 Zm00028ab141040_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab141040 Zm00028ab141040_P001 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab141070 Zm00028ab141070_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab141070 Zm00028ab141070_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141190 Zm00028ab141190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141190 Zm00028ab141190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141190 Zm00028ab141190_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab141200 Zm00028ab141200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00028ab141200 Zm00028ab141200_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab141350 Zm00028ab141350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab141350 Zm00028ab141350_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab141350 Zm00028ab141350_P003 viridiplantae PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00028ab141370 Zm00028ab141370_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab141420 Zm00028ab141420_P005 conditional PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P003 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P004 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00028ab141470 Zm00028ab141470_P004 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab141480 Zm00028ab141480_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab141490 Zm00028ab141490_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab141550 Zm00028ab141550_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab141730 Zm00028ab141730_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab141840 Zm00028ab141840_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab141860 Zm00028ab141860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab141860 Zm00028ab141860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab141860 Zm00028ab141860_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P003 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P003 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P003 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P004 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P004 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P004 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P005 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P005 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab141870 Zm00028ab141870_P005 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab141980 Zm00028ab141980_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab141980 Zm00028ab141980_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab141980 Zm00028ab141980_P003 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab142010 Zm00028ab142010_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab142010 Zm00028ab142010_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00028ab142010 Zm00028ab142010_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab142030 Zm00028ab142030_P005 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab142430 Zm00028ab142430_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab142430 Zm00028ab142430_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab142430 Zm00028ab142430_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab142430 Zm00028ab142430_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab142430 Zm00028ab142430_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab142430 Zm00028ab142430_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab142430 Zm00028ab142430_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab142430 Zm00028ab142430_P002 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab142770 Zm00028ab142770_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab143130 Zm00028ab143130_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab143190 Zm00028ab143190_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab143190 Zm00028ab143190_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab143190 Zm00028ab143190_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab143190 Zm00028ab143190_P004 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00028ab143230 Zm00028ab143230_P001 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00028ab143230 Zm00028ab143230_P002 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00028ab143230 Zm00028ab143230_P003 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00028ab143230 Zm00028ab143230_P004 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab143330 Zm00028ab143330_P006 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab143400 Zm00028ab143400_P001 ubiquitous PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab143450 Zm00028ab143450_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab143450 Zm00028ab143450_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab143590 Zm00028ab143590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab143590 Zm00028ab143590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab143590 Zm00028ab143590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab143600 Zm00028ab143600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab143600 Zm00028ab143600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab143600 Zm00028ab143600_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab143740 Zm00028ab143740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab143740 Zm00028ab143740_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab143830 Zm00028ab143830_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab143830 Zm00028ab143830_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab143830 Zm00028ab143830_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab143830 Zm00028ab143830_P004 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab143860 Zm00028ab143860_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab143930 Zm00028ab143930_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab144100 Zm00028ab144100_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab144180 Zm00028ab144180_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab144180 Zm00028ab144180_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab144180 Zm00028ab144180_P003 expected PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab144190 Zm00028ab144190_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab144190 Zm00028ab144190_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab144190 Zm00028ab144190_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab144190 Zm00028ab144190_P002 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab144200 Zm00028ab144200_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab144200 Zm00028ab144200_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144250 Zm00028ab144250_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144260 Zm00028ab144260_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144260 Zm00028ab144260_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144260 Zm00028ab144260_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144280 Zm00028ab144280_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144280 Zm00028ab144280_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144280 Zm00028ab144280_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144290 Zm00028ab144290_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144290 Zm00028ab144290_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144290 Zm00028ab144290_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144300 Zm00028ab144300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144300 Zm00028ab144300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144300 Zm00028ab144300_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144320 Zm00028ab144320_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144320 Zm00028ab144320_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144320 Zm00028ab144320_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab144330 Zm00028ab144330_P002 conditional PROSYN-PWY L-proline biosynthesis I PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00028ab144470 Zm00028ab144470_P001 conditional PWY-3341 L-proline biosynthesis III PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00028ab144470 Zm00028ab144470_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00028ab144470 Zm00028ab144470_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144520 Zm00028ab144520_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144520 Zm00028ab144520_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144520 Zm00028ab144520_P003 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144520 Zm00028ab144520_P004 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144520 Zm00028ab144520_P005 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P003 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P004 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P005 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P006 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144530 Zm00028ab144530_P007 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144550 Zm00028ab144550_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab144550 Zm00028ab144550_P002 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab144800 Zm00028ab144800_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00028ab144840 Zm00028ab144840_P002 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00028ab144840 Zm00028ab144840_P003 conditional PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab144850 Zm00028ab144850_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab144850 Zm00028ab144850_P002 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab144850 Zm00028ab144850_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab145060 Zm00028ab145060_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab145430 Zm00028ab145430_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab145430 Zm00028ab145430_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab145430 Zm00028ab145430_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab145460 Zm00028ab145460_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab145460 Zm00028ab145460_P001 expected PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab145610 Zm00028ab145610_P002 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P005 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab145780 Zm00028ab145780_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab145860 Zm00028ab145860_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab145860 Zm00028ab145860_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab145860 Zm00028ab145860_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab145860 Zm00028ab145860_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab145860 Zm00028ab145860_P005 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145890 Zm00028ab145890_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145890 Zm00028ab145890_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab145910 Zm00028ab145910_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab145910 Zm00028ab145910_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab145910 Zm00028ab145910_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab145910 Zm00028ab145910_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab145910 Zm00028ab145910_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145940 Zm00028ab145940_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145940 Zm00028ab145940_P002 expected PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab145950 Zm00028ab145950_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab145950 Zm00028ab145950_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab145950 Zm00028ab145950_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab145950 Zm00028ab145950_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab145950 Zm00028ab145950_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145970 Zm00028ab145970_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab145970 Zm00028ab145970_P002 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab145980 Zm00028ab145980_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab145980 Zm00028ab145980_P001 viridiplantae PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab145980 Zm00028ab145980_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab145980 Zm00028ab145980_P002 viridiplantae PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00028ab146060 Zm00028ab146060_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab146180 Zm00028ab146180_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab146530 Zm00028ab146530_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab146530 Zm00028ab146530_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab146530 Zm00028ab146530_P003 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab146550 Zm00028ab146550_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab146550 Zm00028ab146550_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab146550 Zm00028ab146550_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab146550 Zm00028ab146550_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab146550 Zm00028ab146550_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab146670 Zm00028ab146670_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab146750 Zm00028ab146750_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab146750 Zm00028ab146750_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab146960 Zm00028ab146960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab146960 Zm00028ab146960_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab147140 Zm00028ab147140_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab147270 Zm00028ab147270_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab147270 Zm00028ab147270_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab147270 Zm00028ab147270_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab147300 Zm00028ab147300_P001 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab147560 Zm00028ab147560_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab147700 Zm00028ab147700_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab147700 Zm00028ab147700_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab147700 Zm00028ab147700_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P002 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P003 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P004 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P004 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00028ab147760 Zm00028ab147760_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab147830 Zm00028ab147830_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab147830 Zm00028ab147830_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab148000 Zm00028ab148000_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab148060 Zm00028ab148060_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab148280 Zm00028ab148280_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab148290 Zm00028ab148290_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148290 Zm00028ab148290_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148290 Zm00028ab148290_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab148330 Zm00028ab148330_P003 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab148660 Zm00028ab148660_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab148670 Zm00028ab148670_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab148700 Zm00028ab148700_P003 expected PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab148810 Zm00028ab148810_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab148810 Zm00028ab148810_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab148810 Zm00028ab148810_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab148810 Zm00028ab148810_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab148810 Zm00028ab148810_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00028ab148810 Zm00028ab148810_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00028ab148810 Zm00028ab148810_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab148880 Zm00028ab148880_P001 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab148930 Zm00028ab148930_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab148930 Zm00028ab148930_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab148930 Zm00028ab148930_P003 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab148930 Zm00028ab148930_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab149120 Zm00028ab149120_P001 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P003 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P004 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P004 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P004 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab149480 Zm00028ab149480_P004 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab149490 Zm00028ab149490_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab149490 Zm00028ab149490_P002 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P002 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P003 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P003 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P004 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P004 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P005 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab149560 Zm00028ab149560_P005 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab149610 Zm00028ab149610_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab149610 Zm00028ab149610_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab149730 Zm00028ab149730_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab149760 Zm00028ab149760_P003 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab149780 Zm00028ab149780_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab149780 Zm00028ab149780_P003 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab149970 Zm00028ab149970_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab149970 Zm00028ab149970_P002 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab149970 Zm00028ab149970_P003 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab150010 Zm00028ab150010_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab150100 Zm00028ab150100_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab150100 Zm00028ab150100_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab150110 Zm00028ab150110_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab150120 Zm00028ab150120_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab150120 Zm00028ab150120_P002 conditional PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00028ab150140 Zm00028ab150140_P001 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00028ab150140 Zm00028ab150140_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab150380 Zm00028ab150380_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab150390 Zm00028ab150390_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab150400 Zm00028ab150400_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab150410 Zm00028ab150410_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab150490 Zm00028ab150490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab150490 Zm00028ab150490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab150490 Zm00028ab150490_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P005 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P005 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00028ab150620 Zm00028ab150620_P006 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00028ab150620 Zm00028ab150620_P006 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab150760 Zm00028ab150760_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab150810 Zm00028ab150810_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab150810 Zm00028ab150810_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab150810 Zm00028ab150810_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab150810 Zm00028ab150810_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle SEDOHEPTULOSE-BISPHOSPHATASE-RXN EC-3.1.3.37 Zm00028ab150910 Zm00028ab150910_P001 viridiplantae PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab150970 Zm00028ab150970_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab150970 Zm00028ab150970_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab151030 Zm00028ab151030_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151040 Zm00028ab151040_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151050 Zm00028ab151050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151050 Zm00028ab151050_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab151240 Zm00028ab151240_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab151240 Zm00028ab151240_P001 conditional PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab151260 Zm00028ab151260_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab151330 Zm00028ab151330_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab151330 Zm00028ab151330_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab151330 Zm00028ab151330_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab151330 Zm00028ab151330_P002 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab151340 Zm00028ab151340_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab151340 Zm00028ab151340_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab151340 Zm00028ab151340_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab151340 Zm00028ab151340_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151470 Zm00028ab151470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151470 Zm00028ab151470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151520 Zm00028ab151520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151520 Zm00028ab151520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151540 Zm00028ab151540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab151540 Zm00028ab151540_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab151600 Zm00028ab151600_P002 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab151760 Zm00028ab151760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab151830 Zm00028ab151830_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab151940 Zm00028ab151940_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab152350 Zm00028ab152350_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab152350 Zm00028ab152350_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab152350 Zm00028ab152350_P003 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab152380 Zm00028ab152380_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab152380 Zm00028ab152380_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab152380 Zm00028ab152380_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab152450 Zm00028ab152450_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab152450 Zm00028ab152450_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab152450 Zm00028ab152450_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab152450 Zm00028ab152450_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab152450 Zm00028ab152450_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab152450 Zm00028ab152450_P001 ubiquitous PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab152460 Zm00028ab152460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab152530 Zm00028ab152530_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab152580 Zm00028ab152580_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab152580 Zm00028ab152580_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab152830 Zm00028ab152830_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab152920 Zm00028ab152920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab153000 Zm00028ab153000_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab153030 Zm00028ab153030_P002 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab153310 Zm00028ab153310_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab153350 Zm00028ab153350_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab153390 Zm00028ab153390_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab153550 Zm00028ab153550_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab153560 Zm00028ab153560_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab153560 Zm00028ab153560_P002 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P002 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P003 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P003 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P004 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab153660 Zm00028ab153660_P004 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab153770 Zm00028ab153770_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab153830 Zm00028ab153830_P001 ubiquitous NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00028ab153920 Zm00028ab153920_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00028ab153920 Zm00028ab153920_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00028ab153920 Zm00028ab153920_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00028ab153920 Zm00028ab153920_P002 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P003 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab154020 Zm00028ab154020_P004 conditional PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P001 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P002 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P002 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P003 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P003 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P004 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00028ab154210 Zm00028ab154210_P004 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab154360 Zm00028ab154360_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab154360 Zm00028ab154360_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab154360 Zm00028ab154360_P001 NA PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00028ab154450 Zm00028ab154450_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00028ab154450 Zm00028ab154450_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00028ab154450 Zm00028ab154450_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4392 EC-2.7.8.5 Zm00028ab154450 Zm00028ab154450_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab154530 Zm00028ab154530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab154530 Zm00028ab154530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab154530 Zm00028ab154530_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab154640 Zm00028ab154640_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab154640 Zm00028ab154640_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab154650 Zm00028ab154650_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab154650 Zm00028ab154650_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab154650 Zm00028ab154650_P002 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab154820 Zm00028ab154820_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab154820 Zm00028ab154820_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab154820 Zm00028ab154820_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab154820 Zm00028ab154820_P004 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab154850 Zm00028ab154850_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab154870 Zm00028ab154870_P003 NA PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00028ab155060 Zm00028ab155060_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00028ab155060 Zm00028ab155060_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00028ab155070 Zm00028ab155070_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00028ab155070 Zm00028ab155070_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab155110 Zm00028ab155110_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab155110 Zm00028ab155110_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab155230 Zm00028ab155230_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab155230 Zm00028ab155230_P002 ubiquitous PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00028ab155490 Zm00028ab155490_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00028ab155500 Zm00028ab155500_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab155610 Zm00028ab155610_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab155610 Zm00028ab155610_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab155610 Zm00028ab155610_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab155670 Zm00028ab155670_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab155670 Zm00028ab155670_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab155670 Zm00028ab155670_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab155750 Zm00028ab155750_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab155760 Zm00028ab155760_P002 conditional PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab155800 Zm00028ab155800_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab155800 Zm00028ab155800_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab155800 Zm00028ab155800_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab155800 Zm00028ab155800_P002 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab155800 Zm00028ab155800_P003 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab155800 Zm00028ab155800_P003 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab155800 Zm00028ab155800_P004 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab155800 Zm00028ab155800_P004 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab155800 Zm00028ab155800_P005 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab155800 Zm00028ab155800_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab155850 Zm00028ab155850_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab155990 Zm00028ab155990_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P005 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P005 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P005 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P005 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab156030 Zm00028ab156030_P005 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab156210 Zm00028ab156210_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab156210 Zm00028ab156210_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab156210 Zm00028ab156210_P001 NA PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab156310 Zm00028ab156310_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab156420 Zm00028ab156420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab156420 Zm00028ab156420_P002 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab156440 Zm00028ab156440_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P006 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab156580 Zm00028ab156580_P007 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13643 EC-1.13.11.69 Zm00028ab156590 Zm00028ab156590_P001 conditional PWY-6806 carotenoid cleavage RXN-12393 EC-1.13.11.70 Zm00028ab156590 Zm00028ab156590_P001 expected PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00028ab156630 Zm00028ab156630_P001 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00028ab156630 Zm00028ab156630_P002 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00028ab156630 Zm00028ab156630_P003 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab156820 Zm00028ab156820_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab156830 Zm00028ab156830_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab156830 Zm00028ab156830_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab156830 Zm00028ab156830_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab156830 Zm00028ab156830_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab156840 Zm00028ab156840_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab156840 Zm00028ab156840_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab156900 Zm00028ab156900_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab156990 Zm00028ab156990_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab157050 Zm00028ab157050_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab157050 Zm00028ab157050_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab157050 Zm00028ab157050_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab157050 Zm00028ab157050_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab157050 Zm00028ab157050_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab157050 Zm00028ab157050_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab157050 Zm00028ab157050_P002 viridiplantae NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00028ab157070 Zm00028ab157070_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00028ab157070 Zm00028ab157070_P002 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab157140 Zm00028ab157140_P001 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab157250 Zm00028ab157250_P001 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab157420 Zm00028ab157420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab157440 Zm00028ab157440_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab157440 Zm00028ab157440_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab157440 Zm00028ab157440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab157480 Zm00028ab157480_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab157620 Zm00028ab157620_P004 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab157840 Zm00028ab157840_P001 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab157840 Zm00028ab157840_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab157960 Zm00028ab157960_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab157960 Zm00028ab157960_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab157960 Zm00028ab157960_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab157960 Zm00028ab157960_P004 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab158040 Zm00028ab158040_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab158040 Zm00028ab158040_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab158040 Zm00028ab158040_P001 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab158120 Zm00028ab158120_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab158150 Zm00028ab158150_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab158150 Zm00028ab158150_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab158150 Zm00028ab158150_P001 manual PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab158180 Zm00028ab158180_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158200 Zm00028ab158200_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab158220 Zm00028ab158220_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab158410 Zm00028ab158410_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab158410 Zm00028ab158410_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab158470 Zm00028ab158470_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab158470 Zm00028ab158470_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00028ab158570 Zm00028ab158570_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab158570 Zm00028ab158570_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab158570 Zm00028ab158570_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab158620 Zm00028ab158620_P001 viridiplantae PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00028ab158830 Zm00028ab158830_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00028ab158830 Zm00028ab158830_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00028ab158830 Zm00028ab158830_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab158850 Zm00028ab158850_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab158850 Zm00028ab158850_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab158850 Zm00028ab158850_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab158850 Zm00028ab158850_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab158850 Zm00028ab158850_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab158850 Zm00028ab158850_P002 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab158860 Zm00028ab158860_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab158900 Zm00028ab158900_P004 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab159040 Zm00028ab159040_P001 expected PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab159300 Zm00028ab159300_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab159300 Zm00028ab159300_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab159300 Zm00028ab159300_P002 viridiplantae PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00028ab159380 Zm00028ab159380_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00028ab159380 Zm00028ab159380_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00028ab159380 Zm00028ab159380_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00028ab159380 Zm00028ab159380_P002 expected PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab159580 Zm00028ab159580_P002 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab159680 Zm00028ab159680_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab159790 Zm00028ab159790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab159790 Zm00028ab159790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab159790 Zm00028ab159790_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab159820 Zm00028ab159820_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab159820 Zm00028ab159820_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab159820 Zm00028ab159820_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab159830 Zm00028ab159830_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab159830 Zm00028ab159830_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab159830 Zm00028ab159830_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab159880 Zm00028ab159880_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab160020 Zm00028ab160020_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00028ab160020 Zm00028ab160020_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab160180 Zm00028ab160180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab160180 Zm00028ab160180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab160180 Zm00028ab160180_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab160240 Zm00028ab160240_P001 conditional PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab160300 Zm00028ab160300_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab160300 Zm00028ab160300_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab160300 Zm00028ab160300_P003 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab160300 Zm00028ab160300_P004 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab160380 Zm00028ab160380_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab160380 Zm00028ab160380_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab160380 Zm00028ab160380_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab160380 Zm00028ab160380_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab160430 Zm00028ab160430_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab160440 Zm00028ab160440_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab160440 Zm00028ab160440_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab160440 Zm00028ab160440_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab160470 Zm00028ab160470_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab160470 Zm00028ab160470_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab160470 Zm00028ab160470_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab160480 Zm00028ab160480_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab160490 Zm00028ab160490_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab160490 Zm00028ab160490_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab160490 Zm00028ab160490_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab160600 Zm00028ab160600_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab160670 Zm00028ab160670_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab160670 Zm00028ab160670_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab160670 Zm00028ab160670_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab160750 Zm00028ab160750_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab160750 Zm00028ab160750_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab160750 Zm00028ab160750_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab160750 Zm00028ab160750_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab161020 Zm00028ab161020_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab161020 Zm00028ab161020_P002 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab161140 Zm00028ab161140_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab161210 Zm00028ab161210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab161210 Zm00028ab161210_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab161210 Zm00028ab161210_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab161300 Zm00028ab161300_P001 viridiplantae PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00028ab161400 Zm00028ab161400_P001 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00028ab161400 Zm00028ab161400_P002 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab161450 Zm00028ab161450_P001 expected PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P004 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00028ab161510 Zm00028ab161510_P005 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab161660 Zm00028ab161660_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab161660 Zm00028ab161660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab161660 Zm00028ab161660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab161660 Zm00028ab161660_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab161670 Zm00028ab161670_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab161720 Zm00028ab161720_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab161720 Zm00028ab161720_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab161720 Zm00028ab161720_P003 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab161730 Zm00028ab161730_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab161880 Zm00028ab161880_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162130 Zm00028ab162130_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162130 Zm00028ab162130_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab162170 Zm00028ab162170_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162220 Zm00028ab162220_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162220 Zm00028ab162220_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab162270 Zm00028ab162270_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162310 Zm00028ab162310_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab162310 Zm00028ab162310_P001 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab162490 Zm00028ab162490_P001 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab162590 Zm00028ab162590_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab162590 Zm00028ab162590_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab162600 Zm00028ab162600_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab162630 Zm00028ab162630_P001 NA PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab162640 Zm00028ab162640_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab162690 Zm00028ab162690_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab162800 Zm00028ab162800_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab162800 Zm00028ab162800_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab162800 Zm00028ab162800_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab162800 Zm00028ab162800_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab162840 Zm00028ab162840_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab162840 Zm00028ab162840_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162860 Zm00028ab162860_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab162900 Zm00028ab162900_P002 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P005 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P006 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162910 Zm00028ab162910_P007 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162930 Zm00028ab162930_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162930 Zm00028ab162930_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162940 Zm00028ab162940_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162950 Zm00028ab162950_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab162950 Zm00028ab162950_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162960 Zm00028ab162960_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162990 Zm00028ab162990_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab162990 Zm00028ab162990_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab163040 Zm00028ab163040_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab163040 Zm00028ab163040_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab163110 Zm00028ab163110_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab163110 Zm00028ab163110_P001 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab163310 Zm00028ab163310_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab163310 Zm00028ab163310_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab163310 Zm00028ab163310_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab163320 Zm00028ab163320_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab163340 Zm00028ab163340_P003 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab163380 Zm00028ab163380_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab163380 Zm00028ab163380_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab163380 Zm00028ab163380_P003 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab163410 Zm00028ab163410_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab163410 Zm00028ab163410_P002 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00028ab163450 Zm00028ab163450_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab163450 Zm00028ab163450_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab163450 Zm00028ab163450_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00028ab163450 Zm00028ab163450_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00028ab163450 Zm00028ab163450_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00028ab163450 Zm00028ab163450_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab163500 Zm00028ab163500_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab163620 Zm00028ab163620_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab163620 Zm00028ab163620_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab163620 Zm00028ab163620_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab163620 Zm00028ab163620_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab163620 Zm00028ab163620_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab163720 Zm00028ab163720_P003 NA PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab164030 Zm00028ab164030_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab164030 Zm00028ab164030_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab164030 Zm00028ab164030_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab164030 Zm00028ab164030_P004 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab164030 Zm00028ab164030_P005 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab164140 Zm00028ab164140_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab164240 Zm00028ab164240_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab164240 Zm00028ab164240_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab164290 Zm00028ab164290_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab164330 Zm00028ab164330_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab164410 Zm00028ab164410_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab164410 Zm00028ab164410_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab164410 Zm00028ab164410_P003 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab164640 Zm00028ab164640_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab164640 Zm00028ab164640_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab164640 Zm00028ab164640_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab164640 Zm00028ab164640_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab165120 Zm00028ab165120_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab165120 Zm00028ab165120_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab165130 Zm00028ab165130_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab165210 Zm00028ab165210_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab165210 Zm00028ab165210_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab165210 Zm00028ab165210_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab165210 Zm00028ab165210_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165330 Zm00028ab165330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165360 Zm00028ab165360_P006 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab165440 Zm00028ab165440_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab165440 Zm00028ab165440_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab165440 Zm00028ab165440_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab165440 Zm00028ab165440_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab165440 Zm00028ab165440_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165490 Zm00028ab165490_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165490 Zm00028ab165490_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165490 Zm00028ab165490_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab165490 Zm00028ab165490_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab165580 Zm00028ab165580_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab165580 Zm00028ab165580_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab165800 Zm00028ab165800_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab165800 Zm00028ab165800_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab165830 Zm00028ab165830_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab165840 Zm00028ab165840_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00028ab165870 Zm00028ab165870_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab166340 Zm00028ab166340_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab166340 Zm00028ab166340_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab166520 Zm00028ab166520_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab166590 Zm00028ab166590_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab166740 Zm00028ab166740_P004 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00028ab166850 Zm00028ab166850_P001 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00028ab166850 Zm00028ab166850_P002 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00028ab166850 Zm00028ab166850_P003 expected PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16099 EC-1.14.19.4 Zm00028ab166880 Zm00028ab166880_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00028ab166880 Zm00028ab166880_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab166930 Zm00028ab166930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab166930 Zm00028ab166930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab166930 Zm00028ab166930_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab167130 Zm00028ab167130_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab167130 Zm00028ab167130_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab167130 Zm00028ab167130_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab167130 Zm00028ab167130_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab167190 Zm00028ab167190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab167250 Zm00028ab167250_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab167260 Zm00028ab167260_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab167260 Zm00028ab167260_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab167260 Zm00028ab167260_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab167350 Zm00028ab167350_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab167350 Zm00028ab167350_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab167350 Zm00028ab167350_P003 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab167450 Zm00028ab167450_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab167450 Zm00028ab167450_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab167450 Zm00028ab167450_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab167460 Zm00028ab167460_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab167460 Zm00028ab167460_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab167460 Zm00028ab167460_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab167490 Zm00028ab167490_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab167490 Zm00028ab167490_P002 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab167740 Zm00028ab167740_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab167770 Zm00028ab167770_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00028ab168110 Zm00028ab168110_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00028ab168110 Zm00028ab168110_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab168370 Zm00028ab168370_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab168550 Zm00028ab168550_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab168550 Zm00028ab168550_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab168550 Zm00028ab168550_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab168770 Zm00028ab168770_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab168810 Zm00028ab168810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab168810 Zm00028ab168810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab168810 Zm00028ab168810_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab168940 Zm00028ab168940_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00028ab168990 Zm00028ab168990_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00028ab168990 Zm00028ab168990_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab169600 Zm00028ab169600_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab169890 Zm00028ab169890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab169890 Zm00028ab169890_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab169960 Zm00028ab169960_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab169960 Zm00028ab169960_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab169960 Zm00028ab169960_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab169980 Zm00028ab169980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab169980 Zm00028ab169980_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab169980 Zm00028ab169980_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab169980 Zm00028ab169980_P004 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00028ab170090 Zm00028ab170090_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00028ab170090 Zm00028ab170090_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00028ab170090 Zm00028ab170090_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab170280 Zm00028ab170280_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab170280 Zm00028ab170280_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab170290 Zm00028ab170290_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab170290 Zm00028ab170290_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab170430 Zm00028ab170430_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab170440 Zm00028ab170440_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab170440 Zm00028ab170440_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab170440 Zm00028ab170440_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab170440 Zm00028ab170440_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab170660 Zm00028ab170660_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab170660 Zm00028ab170660_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab170660 Zm00028ab170660_P003 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00028ab170840 Zm00028ab170840_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab170850 Zm00028ab170850_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab170910 Zm00028ab170910_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab170910 Zm00028ab170910_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab170910 Zm00028ab170910_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab170910 Zm00028ab170910_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab170910 Zm00028ab170910_P001 NA GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab171020 Zm00028ab171020_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab171020 Zm00028ab171020_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab171120 Zm00028ab171120_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab171120 Zm00028ab171120_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab171120 Zm00028ab171120_P003 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab171140 Zm00028ab171140_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P006 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P007 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab171180 Zm00028ab171180_P008 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab171470 Zm00028ab171470_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab171620 Zm00028ab171620_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab171620 Zm00028ab171620_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab171620 Zm00028ab171620_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab171620 Zm00028ab171620_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab171620 Zm00028ab171620_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab171660 Zm00028ab171660_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab171870 Zm00028ab171870_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab171870 Zm00028ab171870_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab171870 Zm00028ab171870_P001 NA PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171880 Zm00028ab171880_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171880 Zm00028ab171880_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171880 Zm00028ab171880_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171930 Zm00028ab171930_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171930 Zm00028ab171930_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171930 Zm00028ab171930_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab171940 Zm00028ab171940_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P002 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P002 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P002 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P003 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P003 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171960 Zm00028ab171960_P003 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171970 Zm00028ab171970_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171970 Zm00028ab171970_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171970 Zm00028ab171970_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171980 Zm00028ab171980_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171980 Zm00028ab171980_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171980 Zm00028ab171980_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171990 Zm00028ab171990_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171990 Zm00028ab171990_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab171990 Zm00028ab171990_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172000 Zm00028ab172000_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172000 Zm00028ab172000_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172000 Zm00028ab172000_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172020 Zm00028ab172020_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172020 Zm00028ab172020_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab172020 Zm00028ab172020_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab172040 Zm00028ab172040_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab172080 Zm00028ab172080_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab172170 Zm00028ab172170_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab172170 Zm00028ab172170_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab172220 Zm00028ab172220_P003 NA PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab172380 Zm00028ab172380_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab172440 Zm00028ab172440_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab172490 Zm00028ab172490_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab172550 Zm00028ab172550_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab172680 Zm00028ab172680_P002 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P002 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P003 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00028ab172690 Zm00028ab172690_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab172790 Zm00028ab172790_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab172790 Zm00028ab172790_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab172790 Zm00028ab172790_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab172880 Zm00028ab172880_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab172880 Zm00028ab172880_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab173130 Zm00028ab173130_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab173130 Zm00028ab173130_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab173130 Zm00028ab173130_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab173260 Zm00028ab173260_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00028ab173370 Zm00028ab173370_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00028ab173370 Zm00028ab173370_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00028ab173370 Zm00028ab173370_P003 ubiquitous PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab173420 Zm00028ab173420_P002 viridiplantae PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab173450 Zm00028ab173450_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab173520 Zm00028ab173520_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab173570 Zm00028ab173570_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab173590 Zm00028ab173590_P002 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab173610 Zm00028ab173610_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab173620 Zm00028ab173620_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab173620 Zm00028ab173620_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab173640 Zm00028ab173640_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab173640 Zm00028ab173640_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab173650 Zm00028ab173650_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab173650 Zm00028ab173650_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab173660 Zm00028ab173660_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab173660 Zm00028ab173660_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab173740 Zm00028ab173740_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab173740 Zm00028ab173740_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab173740 Zm00028ab173740_P001 manual PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab173760 Zm00028ab173760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab173760 Zm00028ab173760_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00028ab173800 Zm00028ab173800_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00028ab173800 Zm00028ab173800_P002 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00028ab173800 Zm00028ab173800_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab173870 Zm00028ab173870_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab173870 Zm00028ab173870_P002 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab173910 Zm00028ab173910_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab173910 Zm00028ab173910_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab174080 Zm00028ab174080_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab174240 Zm00028ab174240_P001 expected RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab174330 Zm00028ab174330_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab174340 Zm00028ab174340_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab174340 Zm00028ab174340_P001 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab174620 Zm00028ab174620_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab174620 Zm00028ab174620_P002 excluded PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab174640 Zm00028ab174640_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab174640 Zm00028ab174640_P002 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab174650 Zm00028ab174650_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab174700 Zm00028ab174700_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab174710 Zm00028ab174710_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab174710 Zm00028ab174710_P003 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00028ab174740 Zm00028ab174740_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab174770 Zm00028ab174770_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab174790 Zm00028ab174790_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab174800 Zm00028ab174800_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab174810 Zm00028ab174810_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab174810 Zm00028ab174810_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab174850 Zm00028ab174850_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab174850 Zm00028ab174850_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab174850 Zm00028ab174850_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab174850 Zm00028ab174850_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab174890 Zm00028ab174890_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab175050 Zm00028ab175050_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab175050 Zm00028ab175050_P002 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P002 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P003 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P003 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P003 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab175120 Zm00028ab175120_P003 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab175160 Zm00028ab175160_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab175160 Zm00028ab175160_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab175160 Zm00028ab175160_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab175180 Zm00028ab175180_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab175180 Zm00028ab175180_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab175180 Zm00028ab175180_P002 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00028ab175180 Zm00028ab175180_P002 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab175410 Zm00028ab175410_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab175410 Zm00028ab175410_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab175410 Zm00028ab175410_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab175420 Zm00028ab175420_P001 viridiplantae PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab175450 Zm00028ab175450_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab175450 Zm00028ab175450_P002 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00028ab175450 Zm00028ab175450_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab175480 Zm00028ab175480_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab175480 Zm00028ab175480_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab175480 Zm00028ab175480_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab175510 Zm00028ab175510_P001 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab175510 Zm00028ab175510_P002 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab175510 Zm00028ab175510_P003 ubiquitous PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab175520 Zm00028ab175520_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab175520 Zm00028ab175520_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab175620 Zm00028ab175620_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab175620 Zm00028ab175620_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab175860 Zm00028ab175860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab175860 Zm00028ab175860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab175860 Zm00028ab175860_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab175900 Zm00028ab175900_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab175900 Zm00028ab175900_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab175930 Zm00028ab175930_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab176010 Zm00028ab176010_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00028ab176140 Zm00028ab176140_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00028ab176140 Zm00028ab176140_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00028ab176140 Zm00028ab176140_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00028ab176140 Zm00028ab176140_P004 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab176370 Zm00028ab176370_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab176370 Zm00028ab176370_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab176370 Zm00028ab176370_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab176370 Zm00028ab176370_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab176370 Zm00028ab176370_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab176370 Zm00028ab176370_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab176370 Zm00028ab176370_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab176370 Zm00028ab176370_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab176950 Zm00028ab176950_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab176950 Zm00028ab176950_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab176950 Zm00028ab176950_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab176950 Zm00028ab176950_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab176950 Zm00028ab176950_P005 NA PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab177340 Zm00028ab177340_P002 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab177380 Zm00028ab177380_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab177380 Zm00028ab177380_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab177380 Zm00028ab177380_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab177430 Zm00028ab177430_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab177450 Zm00028ab177450_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab177510 Zm00028ab177510_P001 viridiplantae PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab177620 Zm00028ab177620_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab177640 Zm00028ab177640_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1104 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 expected PWY-7186 superpathway of scopolin and esculin biosynthesis RXN-1104 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1143 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 conditional PWY-5868 simple coumarins biosynthesis RXN-1104 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 NA PWY-2181 free phenylpropanoid acid biosynthesis RXN-1104 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 conditional PWY-5168 ferulate and sinapate biosynthesis RXN-1143 EC-2.1.1.68 Zm00028ab177670 Zm00028ab177670_P001 conditional ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab177690 Zm00028ab177690_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab177690 Zm00028ab177690_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab177720 Zm00028ab177720_P001 NA PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab177760 Zm00028ab177760_P001 conditional PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab177960 Zm00028ab177960_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab177960 Zm00028ab177960_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab178070 Zm00028ab178070_P003 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab178120 Zm00028ab178120_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab178240 Zm00028ab178240_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab178240 Zm00028ab178240_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00028ab178340 Zm00028ab178340_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab178380 Zm00028ab178380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab178380 Zm00028ab178380_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab178380 Zm00028ab178380_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab178490 Zm00028ab178490_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab178490 Zm00028ab178490_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab178490 Zm00028ab178490_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab178490 Zm00028ab178490_P001 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P004 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P005 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P006 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab178720 Zm00028ab178720_P007 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab178820 Zm00028ab178820_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab178880 Zm00028ab178880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab178880 Zm00028ab178880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab178880 Zm00028ab178880_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab178980 Zm00028ab178980_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab178980 Zm00028ab178980_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab179100 Zm00028ab179100_P001 ubiquitous PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab179110 Zm00028ab179110_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab179110 Zm00028ab179110_P001 NA PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab179130 Zm00028ab179130_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab179350 Zm00028ab179350_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab179350 Zm00028ab179350_P001 conditional PWY-5098 chlorophyll a degradation I 3.1.1.82-RXN EC-3.1.1.82 Zm00028ab179390 Zm00028ab179390_P001 expected PWY-6585 2-methylketone biosynthesis RXN-11669 EC-4.1.1.56 Zm00028ab179390 Zm00028ab179390_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab179540 Zm00028ab179540_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab179650 Zm00028ab179650_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab179650 Zm00028ab179650_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab179650 Zm00028ab179650_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab179650 Zm00028ab179650_P004 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P003 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab179790 Zm00028ab179790_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab179950 Zm00028ab179950_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab179950 Zm00028ab179950_P001 conditional PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab180150 Zm00028ab180150_P001 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab180270 Zm00028ab180270_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab180270 Zm00028ab180270_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab180270 Zm00028ab180270_P003 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab180690 Zm00028ab180690_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab180690 Zm00028ab180690_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab180690 Zm00028ab180690_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab180690 Zm00028ab180690_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab180690 Zm00028ab180690_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab180720 Zm00028ab180720_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab180720 Zm00028ab180720_P002 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab180740 Zm00028ab180740_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab180740 Zm00028ab180740_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00028ab180750 Zm00028ab180750_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab181030 Zm00028ab181030_P002 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P002 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P003 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00028ab181050 Zm00028ab181050_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab181130 Zm00028ab181130_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab181130 Zm00028ab181130_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab181130 Zm00028ab181130_P003 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab181160 Zm00028ab181160_P003 conditional PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab181180 Zm00028ab181180_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00028ab181180 Zm00028ab181180_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00028ab181180 Zm00028ab181180_P001 expected PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab181260 Zm00028ab181260_P001 ubiquitous PWY-6887 kauralexin biosynthesis RXN-12593 EC-4.2.3.103 Zm00028ab181270 Zm00028ab181270_P001 conditional PWY-7481 oryzalide A biosynthesis RXN-12593 EC-4.2.3.103 Zm00028ab181270 Zm00028ab181270_P001 conditional PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P002 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab181380 Zm00028ab181380_P002 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab181520 Zm00028ab181520_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab181520 Zm00028ab181520_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab181520 Zm00028ab181520_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00028ab181560 Zm00028ab181560_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab181640 Zm00028ab181640_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab181640 Zm00028ab181640_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab181680 Zm00028ab181680_P003 expected PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab181820 Zm00028ab181820_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab181820 Zm00028ab181820_P002 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab181820 Zm00028ab181820_P003 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab181820 Zm00028ab181820_P004 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00028ab181820 Zm00028ab181820_P005 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab181860 Zm00028ab181860_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab182030 Zm00028ab182030_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab182140 Zm00028ab182140_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab182180 Zm00028ab182180_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab182180 Zm00028ab182180_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab182180 Zm00028ab182180_P003 expected PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab182350 Zm00028ab182350_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab182500 Zm00028ab182500_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab182500 Zm00028ab182500_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab182500 Zm00028ab182500_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab182500 Zm00028ab182500_P002 conditional HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab182550 Zm00028ab182550_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab182550 Zm00028ab182550_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab182550 Zm00028ab182550_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab182560 Zm00028ab182560_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab182560 Zm00028ab182560_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab182560 Zm00028ab182560_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab182680 Zm00028ab182680_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab182680 Zm00028ab182680_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab182680 Zm00028ab182680_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab182680 Zm00028ab182680_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab182690 Zm00028ab182690_P001 expected PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00028ab182720 Zm00028ab182720_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00028ab182720 Zm00028ab182720_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab182730 Zm00028ab182730_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab182910 Zm00028ab182910_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab182920 Zm00028ab182920_P001 expected PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab183070 Zm00028ab183070_P001 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab183070 Zm00028ab183070_P002 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab183310 Zm00028ab183310_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab183310 Zm00028ab183310_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab183410 Zm00028ab183410_P001 expected PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab183440 Zm00028ab183440_P002 NA PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab183690 Zm00028ab183690_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab183800 Zm00028ab183800_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab183810 Zm00028ab183810_P001 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab183870 Zm00028ab183870_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab184010 Zm00028ab184010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab184010 Zm00028ab184010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab184010 Zm00028ab184010_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab184010 Zm00028ab184010_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab184010 Zm00028ab184010_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab184010 Zm00028ab184010_P003 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab184200 Zm00028ab184200_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab184200 Zm00028ab184200_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab184200 Zm00028ab184200_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab184200 Zm00028ab184200_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab184200 Zm00028ab184200_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab184200 Zm00028ab184200_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab184200 Zm00028ab184200_P002 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00028ab184300 Zm00028ab184300_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00028ab184300 Zm00028ab184300_P001 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00028ab184300 Zm00028ab184300_P002 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00028ab184300 Zm00028ab184300_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab184320 Zm00028ab184320_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab184320 Zm00028ab184320_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab184320 Zm00028ab184320_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab184320 Zm00028ab184320_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00028ab184320 Zm00028ab184320_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab184330 Zm00028ab184330_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab184330 Zm00028ab184330_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab184330 Zm00028ab184330_P003 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab184330 Zm00028ab184330_P004 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab184330 Zm00028ab184330_P005 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab184440 Zm00028ab184440_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab184620 Zm00028ab184620_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P004 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab184810 Zm00028ab184810_P005 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab184840 Zm00028ab184840_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab184840 Zm00028ab184840_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab184840 Zm00028ab184840_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab184900 Zm00028ab184900_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00028ab184950 Zm00028ab184950_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab185060 Zm00028ab185060_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab185060 Zm00028ab185060_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab185090 Zm00028ab185090_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab185090 Zm00028ab185090_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab185090 Zm00028ab185090_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab185090 Zm00028ab185090_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab185090 Zm00028ab185090_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab185090 Zm00028ab185090_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab185090 Zm00028ab185090_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00028ab185090 Zm00028ab185090_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab185180 Zm00028ab185180_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab185250 Zm00028ab185250_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab185250 Zm00028ab185250_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab185270 Zm00028ab185270_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab185270 Zm00028ab185270_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185290 Zm00028ab185290_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185290 Zm00028ab185290_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185290 Zm00028ab185290_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185300 Zm00028ab185300_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185300 Zm00028ab185300_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab185300 Zm00028ab185300_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab185350 Zm00028ab185350_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab185350 Zm00028ab185350_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab185350 Zm00028ab185350_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab185460 Zm00028ab185460_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab185490 Zm00028ab185490_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab185850 Zm00028ab185850_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab185850 Zm00028ab185850_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab185870 Zm00028ab185870_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab186060 Zm00028ab186060_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab186100 Zm00028ab186100_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab186100 Zm00028ab186100_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab186100 Zm00028ab186100_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab186110 Zm00028ab186110_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab186110 Zm00028ab186110_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab186210 Zm00028ab186210_P004 conditional PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00028ab186500 Zm00028ab186500_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00028ab186500 Zm00028ab186500_P001 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab186600 Zm00028ab186600_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab186600 Zm00028ab186600_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab186600 Zm00028ab186600_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab186600 Zm00028ab186600_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab186600 Zm00028ab186600_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab186630 Zm00028ab186630_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab186630 Zm00028ab186630_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab187290 Zm00028ab187290_P001 viridiplantae PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab187840 Zm00028ab187840_P002 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P003 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P004 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P005 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab187970 Zm00028ab187970_P006 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab188170 Zm00028ab188170_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab188170 Zm00028ab188170_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab188170 Zm00028ab188170_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab188230 Zm00028ab188230_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab188230 Zm00028ab188230_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab188230 Zm00028ab188230_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab188230 Zm00028ab188230_P002 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab188260 Zm00028ab188260_P001 conditional COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00028ab188360 Zm00028ab188360_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00028ab188360 Zm00028ab188360_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab188480 Zm00028ab188480_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab188480 Zm00028ab188480_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab188480 Zm00028ab188480_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab188530 Zm00028ab188530_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab188530 Zm00028ab188530_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab188530 Zm00028ab188530_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab188860 Zm00028ab188860_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab188860 Zm00028ab188860_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab188900 Zm00028ab188900_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab188900 Zm00028ab188900_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab188900 Zm00028ab188900_P002 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab189000 Zm00028ab189000_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab189050 Zm00028ab189050_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab189320 Zm00028ab189320_P002 NA PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab189380 Zm00028ab189380_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab189570 Zm00028ab189570_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab189570 Zm00028ab189570_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab189570 Zm00028ab189570_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab189600 Zm00028ab189600_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab189600 Zm00028ab189600_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab189600 Zm00028ab189600_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab189600 Zm00028ab189600_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab189600 Zm00028ab189600_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab189600 Zm00028ab189600_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab189600 Zm00028ab189600_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab189600 Zm00028ab189600_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab189600 Zm00028ab189600_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab189600 Zm00028ab189600_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab189600 Zm00028ab189600_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab189600 Zm00028ab189600_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab189630 Zm00028ab189630_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab189700 Zm00028ab189700_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab189700 Zm00028ab189700_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab189700 Zm00028ab189700_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab189700 Zm00028ab189700_P002 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab189860 Zm00028ab189860_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P003 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P004 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P005 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab189980 Zm00028ab189980_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab189990 Zm00028ab189990_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab189990 Zm00028ab189990_P002 NA PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.71-RXN EC-2.1.1.71 Zm00028ab190070 Zm00028ab190070_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.71-RXN EC-2.1.1.71 Zm00028ab190070 Zm00028ab190070_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV RXN4FS-2 EC-2.1.1.71 Zm00028ab190070 Zm00028ab190070_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab190160 Zm00028ab190160_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab190160 Zm00028ab190160_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab190160 Zm00028ab190160_P003 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab190160 Zm00028ab190160_P004 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab190460 Zm00028ab190460_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab190460 Zm00028ab190460_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab190460 Zm00028ab190460_P003 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab190500 Zm00028ab190500_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab190500 Zm00028ab190500_P001 NA PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab190520 Zm00028ab190520_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00028ab190520 Zm00028ab190520_P002 conditional PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00028ab190660 Zm00028ab190660_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab190820 Zm00028ab190820_P001 expected PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab190870 Zm00028ab190870_P002 NA PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab190980 Zm00028ab190980_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab190980 Zm00028ab190980_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00028ab190980 Zm00028ab190980_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P005 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P006 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab191060 Zm00028ab191060_P007 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab191580 Zm00028ab191580_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab191580 Zm00028ab191580_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab191580 Zm00028ab191580_P001 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab191670 Zm00028ab191670_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab191670 Zm00028ab191670_P004 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab191720 Zm00028ab191720_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab191810 Zm00028ab191810_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab191810 Zm00028ab191810_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab191810 Zm00028ab191810_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab191810 Zm00028ab191810_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00028ab191930 Zm00028ab191930_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00028ab191930 Zm00028ab191930_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00028ab191930 Zm00028ab191930_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab191990 Zm00028ab191990_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab192000 Zm00028ab192000_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab192040 Zm00028ab192040_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00028ab192040 Zm00028ab192040_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab192190 Zm00028ab192190_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab192320 Zm00028ab192320_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab192320 Zm00028ab192320_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab192320 Zm00028ab192320_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P003 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab192320 Zm00028ab192320_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab192460 Zm00028ab192460_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab192460 Zm00028ab192460_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab192460 Zm00028ab192460_P001 conditional PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab192490 Zm00028ab192490_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab192490 Zm00028ab192490_P002 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00028ab192830 Zm00028ab192830_P003 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00028ab192960 Zm00028ab192960_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00028ab192960 Zm00028ab192960_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab193440 Zm00028ab193440_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab193470 Zm00028ab193470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab193470 Zm00028ab193470_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab193470 Zm00028ab193470_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P003 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab193620 Zm00028ab193620_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00028ab193790 Zm00028ab193790_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab193820 Zm00028ab193820_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab193840 Zm00028ab193840_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab193840 Zm00028ab193840_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab193860 Zm00028ab193860_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab193870 Zm00028ab193870_P001 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab193880 Zm00028ab193880_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab194000 Zm00028ab194000_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab194010 Zm00028ab194010_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab194020 Zm00028ab194020_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab194030 Zm00028ab194030_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab194120 Zm00028ab194120_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab194120 Zm00028ab194120_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab194120 Zm00028ab194120_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab194120 Zm00028ab194120_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab194150 Zm00028ab194150_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab194150 Zm00028ab194150_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab194150 Zm00028ab194150_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab194150 Zm00028ab194150_P004 NA PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab194200 Zm00028ab194200_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab194330 Zm00028ab194330_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab194330 Zm00028ab194330_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab194330 Zm00028ab194330_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab194330 Zm00028ab194330_P002 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab194430 Zm00028ab194430_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab194450 Zm00028ab194450_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab194450 Zm00028ab194450_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab194450 Zm00028ab194450_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab194460 Zm00028ab194460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab194460 Zm00028ab194460_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab194460 Zm00028ab194460_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab194500 Zm00028ab194500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab194500 Zm00028ab194500_P002 viridiplantae PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00028ab194580 Zm00028ab194580_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab194690 Zm00028ab194690_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab194810 Zm00028ab194810_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab194810 Zm00028ab194810_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOSAMINEPNACETYLTRANS-RXN EC-2.3.1.4 Zm00028ab194840 Zm00028ab194840_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab194910 Zm00028ab194910_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P003 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab194940 Zm00028ab194940_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab194980 Zm00028ab194980_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab195570 Zm00028ab195570_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab195720 Zm00028ab195720_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab195720 Zm00028ab195720_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab195720 Zm00028ab195720_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab195820 Zm00028ab195820_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab195820 Zm00028ab195820_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab195840 Zm00028ab195840_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab195850 Zm00028ab195850_P001 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab195900 Zm00028ab195900_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab196020 Zm00028ab196020_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab196200 Zm00028ab196200_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab196200 Zm00028ab196200_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab196200 Zm00028ab196200_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab196200 Zm00028ab196200_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab196210 Zm00028ab196210_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab196210 Zm00028ab196210_P002 expected PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00028ab196320 Zm00028ab196320_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00028ab196340 Zm00028ab196340_P006 expected PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00028ab196800 Zm00028ab196800_P002 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab196860 Zm00028ab196860_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P004 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab196960 Zm00028ab196960_P005 ubiquitous PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00028ab197120 Zm00028ab197120_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00028ab197120 Zm00028ab197120_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00028ab197120 Zm00028ab197120_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00028ab197120 Zm00028ab197120_P001 excluded PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab197200 Zm00028ab197200_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab197470 Zm00028ab197470_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab197470 Zm00028ab197470_P002 viridiplantae PWY-5307 gentiodelphin biosynthesis RXN-8233 EC-2.3.1.153 Zm00028ab198040 Zm00028ab198040_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab198150 Zm00028ab198150_P004 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab198170 Zm00028ab198170_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab198170 Zm00028ab198170_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab198170 Zm00028ab198170_P003 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab198170 Zm00028ab198170_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab198250 Zm00028ab198250_P001 expected LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P002 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P002 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P003 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab198530 Zm00028ab198530_P003 NA PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab198640 Zm00028ab198640_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab198640 Zm00028ab198640_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab198640 Zm00028ab198640_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab198640 Zm00028ab198640_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab198730 Zm00028ab198730_P003 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab198740 Zm00028ab198740_P004 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab199010 Zm00028ab199010_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab199070 Zm00028ab199070_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00028ab199230 Zm00028ab199230_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00028ab199230 Zm00028ab199230_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00028ab199230 Zm00028ab199230_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab199580 Zm00028ab199580_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab199580 Zm00028ab199580_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab199580 Zm00028ab199580_P001 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab199660 Zm00028ab199660_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab199870 Zm00028ab199870_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab199870 Zm00028ab199870_P002 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P002 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab199920 Zm00028ab199920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200020 Zm00028ab200020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200020 Zm00028ab200020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200020 Zm00028ab200020_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200020 Zm00028ab200020_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab200060 Zm00028ab200060_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab200060 Zm00028ab200060_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab200190 Zm00028ab200190_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab200190 Zm00028ab200190_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab200190 Zm00028ab200190_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab200190 Zm00028ab200190_P004 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab200210 Zm00028ab200210_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab200260 Zm00028ab200260_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab200260 Zm00028ab200260_P002 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab200280 Zm00028ab200280_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab200280 Zm00028ab200280_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab200420 Zm00028ab200420_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200420 Zm00028ab200420_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200420 Zm00028ab200420_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab200470 Zm00028ab200470_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab200490 Zm00028ab200490_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab200560 Zm00028ab200560_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab200570 Zm00028ab200570_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab200570 Zm00028ab200570_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab200570 Zm00028ab200570_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab200570 Zm00028ab200570_P001 viridiplantae PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab200570 Zm00028ab200570_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab200570 Zm00028ab200570_P002 NA PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab200630 Zm00028ab200630_P001 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab200630 Zm00028ab200630_P002 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab200630 Zm00028ab200630_P003 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab200630 Zm00028ab200630_P004 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab200630 Zm00028ab200630_P005 expected PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00028ab200730 Zm00028ab200730_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200770 Zm00028ab200770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200770 Zm00028ab200770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200770 Zm00028ab200770_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab200770 Zm00028ab200770_P002 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab200820 Zm00028ab200820_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab200880 Zm00028ab200880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200880 Zm00028ab200880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200880 Zm00028ab200880_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab200890 Zm00028ab200890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200890 Zm00028ab200890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab200890 Zm00028ab200890_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab201200 Zm00028ab201200_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab201200 Zm00028ab201200_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab201200 Zm00028ab201200_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab201210 Zm00028ab201210_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab201210 Zm00028ab201210_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab201210 Zm00028ab201210_P001 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab201230 Zm00028ab201230_P001 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab201230 Zm00028ab201230_P002 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab201290 Zm00028ab201290_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab201290 Zm00028ab201290_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab201290 Zm00028ab201290_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201350 Zm00028ab201350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201350 Zm00028ab201350_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201350 Zm00028ab201350_P003 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab201360 Zm00028ab201360_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab201360 Zm00028ab201360_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab201410 Zm00028ab201410_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab201410 Zm00028ab201410_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab201410 Zm00028ab201410_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab201430 Zm00028ab201430_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab201430 Zm00028ab201430_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab201430 Zm00028ab201430_P001 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab201510 Zm00028ab201510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201560 Zm00028ab201560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201560 Zm00028ab201560_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab201560 Zm00028ab201560_P003 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab201580 Zm00028ab201580_P006 NA PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab201780 Zm00028ab201780_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab201780 Zm00028ab201780_P002 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab201900 Zm00028ab201900_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab201900 Zm00028ab201900_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab201980 Zm00028ab201980_P006 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab202020 Zm00028ab202020_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab202020 Zm00028ab202020_P002 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab202190 Zm00028ab202190_P001 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00028ab202250 Zm00028ab202250_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00028ab202250 Zm00028ab202250_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00028ab202250 Zm00028ab202250_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab202270 Zm00028ab202270_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab202270 Zm00028ab202270_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab202300 Zm00028ab202300_P005 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab202330 Zm00028ab202330_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab202330 Zm00028ab202330_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab202330 Zm00028ab202330_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab202330 Zm00028ab202330_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab202350 Zm00028ab202350_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab202350 Zm00028ab202350_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab202350 Zm00028ab202350_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab202350 Zm00028ab202350_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab202420 Zm00028ab202420_P001 conditional PWYQT-4433 CA1P biosynthesis 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN EC-3.1.3.63 Zm00028ab202530 Zm00028ab202530_P001 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab202750 Zm00028ab202750_P004 expected PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab203020 Zm00028ab203020_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab203020 Zm00028ab203020_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab203020 Zm00028ab203020_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab203020 Zm00028ab203020_P002 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab203040 Zm00028ab203040_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab203040 Zm00028ab203040_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab203190 Zm00028ab203190_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab203190 Zm00028ab203190_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab203230 Zm00028ab203230_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab203320 Zm00028ab203320_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab203320 Zm00028ab203320_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab203320 Zm00028ab203320_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab203320 Zm00028ab203320_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab203430 Zm00028ab203430_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab203450 Zm00028ab203450_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab203460 Zm00028ab203460_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab203520 Zm00028ab203520_P001 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203710 Zm00028ab203710_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203740 Zm00028ab203740_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203740 Zm00028ab203740_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab203740 Zm00028ab203740_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab203740 Zm00028ab203740_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab203920 Zm00028ab203920_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab203920 Zm00028ab203920_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab204130 Zm00028ab204130_P001 excluded GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab204530 Zm00028ab204530_P001 NA PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00028ab204630 Zm00028ab204630_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab204670 Zm00028ab204670_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab204670 Zm00028ab204670_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab204680 Zm00028ab204680_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab204680 Zm00028ab204680_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab204710 Zm00028ab204710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab204710 Zm00028ab204710_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab204710 Zm00028ab204710_P003 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab204740 Zm00028ab204740_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab204740 Zm00028ab204740_P002 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab204930 Zm00028ab204930_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205180 Zm00028ab205180_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205180 Zm00028ab205180_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205180 Zm00028ab205180_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205180 Zm00028ab205180_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205180 Zm00028ab205180_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00028ab205180 Zm00028ab205180_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00028ab205190 Zm00028ab205190_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab205190 Zm00028ab205190_P002 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00028ab205190 Zm00028ab205190_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab205210 Zm00028ab205210_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab205210 Zm00028ab205210_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab205320 Zm00028ab205320_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab205350 Zm00028ab205350_P001 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab205360 Zm00028ab205360_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab205430 Zm00028ab205430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab205430 Zm00028ab205430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab205430 Zm00028ab205430_P002 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab205430 Zm00028ab205430_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab205460 Zm00028ab205460_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab205460 Zm00028ab205460_P002 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab205590 Zm00028ab205590_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab205590 Zm00028ab205590_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab205650 Zm00028ab205650_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab205650 Zm00028ab205650_P002 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab205650 Zm00028ab205650_P003 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab205650 Zm00028ab205650_P004 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab205740 Zm00028ab205740_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab205740 Zm00028ab205740_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab205740 Zm00028ab205740_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab205740 Zm00028ab205740_P001 NA PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab205870 Zm00028ab205870_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab205870 Zm00028ab205870_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab205870 Zm00028ab205870_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab205870 Zm00028ab205870_P004 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab205870 Zm00028ab205870_P005 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab205940 Zm00028ab205940_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab205940 Zm00028ab205940_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab205940 Zm00028ab205940_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab205940 Zm00028ab205940_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00028ab206220 Zm00028ab206220_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00028ab206220 Zm00028ab206220_P001 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00028ab206230 Zm00028ab206230_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00028ab206230 Zm00028ab206230_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab206240 Zm00028ab206240_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab206300 Zm00028ab206300_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab206510 Zm00028ab206510_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab206510 Zm00028ab206510_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab206510 Zm00028ab206510_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab206510 Zm00028ab206510_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab206600 Zm00028ab206600_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab206620 Zm00028ab206620_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P003 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P004 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P005 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab206670 Zm00028ab206670_P006 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab206690 Zm00028ab206690_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab206690 Zm00028ab206690_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab207050 Zm00028ab207050_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab207070 Zm00028ab207070_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab207070 Zm00028ab207070_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab207170 Zm00028ab207170_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab207190 Zm00028ab207190_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab207190 Zm00028ab207190_P002 ubiquitous PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab207210 Zm00028ab207210_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab207210 Zm00028ab207210_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab207210 Zm00028ab207210_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P004 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P005 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207430 Zm00028ab207430_P005 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207500 Zm00028ab207500_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207500 Zm00028ab207500_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab207510 Zm00028ab207510_P001 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab207540 Zm00028ab207540_P003 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab207580 Zm00028ab207580_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab207590 Zm00028ab207590_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab207590 Zm00028ab207590_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab207590 Zm00028ab207590_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab207700 Zm00028ab207700_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab207770 Zm00028ab207770_P002 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P006 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P006 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab207930 Zm00028ab207930_P006 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab207990 Zm00028ab207990_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab207990 Zm00028ab207990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab208010 Zm00028ab208010_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab208020 Zm00028ab208020_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab208020 Zm00028ab208020_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab208020 Zm00028ab208020_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab208020 Zm00028ab208020_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab208510 Zm00028ab208510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab208510 Zm00028ab208510_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab208510 Zm00028ab208510_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab208660 Zm00028ab208660_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab208660 Zm00028ab208660_P002 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab208720 Zm00028ab208720_P001 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab208980 Zm00028ab208980_P001 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab208980 Zm00028ab208980_P002 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab209150 Zm00028ab209150_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab209150 Zm00028ab209150_P002 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab209250 Zm00028ab209250_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209310 Zm00028ab209310_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209310 Zm00028ab209310_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209310 Zm00028ab209310_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209310 Zm00028ab209310_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209310 Zm00028ab209310_P005 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209320 Zm00028ab209320_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab209320 Zm00028ab209320_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab209390 Zm00028ab209390_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab209390 Zm00028ab209390_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00028ab209450 Zm00028ab209450_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab209780 Zm00028ab209780_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab209780 Zm00028ab209780_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab209900 Zm00028ab209900_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P004 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P005 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P005 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P006 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P006 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P007 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P007 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab210030 Zm00028ab210030_P008 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P008 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab210030 Zm00028ab210030_P008 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab210150 Zm00028ab210150_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab210380 Zm00028ab210380_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab210380 Zm00028ab210380_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab210380 Zm00028ab210380_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab210380 Zm00028ab210380_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab210780 Zm00028ab210780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab210780 Zm00028ab210780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab210780 Zm00028ab210780_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab210990 Zm00028ab210990_P003 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab211040 Zm00028ab211040_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab211080 Zm00028ab211080_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab211080 Zm00028ab211080_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00028ab211830 Zm00028ab211830_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00028ab211830 Zm00028ab211830_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00028ab211830 Zm00028ab211830_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P004 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab211950 Zm00028ab211950_P004 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212000 Zm00028ab212000_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P005 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P006 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P006 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P006 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab212010 Zm00028ab212010_P006 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab212380 Zm00028ab212380_P006 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab212400 Zm00028ab212400_P001 expected PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab212410 Zm00028ab212410_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab212410 Zm00028ab212410_P002 NA PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab212530 Zm00028ab212530_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab212800 Zm00028ab212800_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab212800 Zm00028ab212800_P002 NA PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab212980 Zm00028ab212980_P002 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab213040 Zm00028ab213040_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab213130 Zm00028ab213130_P001 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab213220 Zm00028ab213220_P001 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab213300 Zm00028ab213300_P002 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00028ab213330 Zm00028ab213330_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00028ab213330 Zm00028ab213330_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00028ab213330 Zm00028ab213330_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab213340 Zm00028ab213340_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab213360 Zm00028ab213360_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab213360 Zm00028ab213360_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab213360 Zm00028ab213360_P003 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P004 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P005 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P006 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P007 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213410 Zm00028ab213410_P008 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab213600 Zm00028ab213600_P002 conditional PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00028ab213750 Zm00028ab213750_P001 expected PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00028ab213750 Zm00028ab213750_P002 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab213820 Zm00028ab213820_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab214140 Zm00028ab214140_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab214140 Zm00028ab214140_P002 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab214140 Zm00028ab214140_P003 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8342 EC-2.8.1.12 Zm00028ab214150 Zm00028ab214150_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab214180 Zm00028ab214180_P002 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab214260 Zm00028ab214260_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab214290 Zm00028ab214290_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab214290 Zm00028ab214290_P002 excluded PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab214300 Zm00028ab214300_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab214370 Zm00028ab214370_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab214370 Zm00028ab214370_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab214370 Zm00028ab214370_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab214370 Zm00028ab214370_P002 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab214400 Zm00028ab214400_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab214400 Zm00028ab214400_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab214400 Zm00028ab214400_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab214400 Zm00028ab214400_P002 conditional PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00028ab214550 Zm00028ab214550_P001 expected PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00028ab214550 Zm00028ab214550_P002 expected PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab214710 Zm00028ab214710_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab214710 Zm00028ab214710_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab214710 Zm00028ab214710_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab214890 Zm00028ab214890_P003 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab214930 Zm00028ab214930_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab214930 Zm00028ab214930_P001 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab214960 Zm00028ab214960_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab214960 Zm00028ab214960_P002 conditional PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215300 Zm00028ab215300_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215300 Zm00028ab215300_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215530 Zm00028ab215530_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215530 Zm00028ab215530_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215530 Zm00028ab215530_P003 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00028ab215530 Zm00028ab215530_P004 ubiquitous GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab215710 Zm00028ab215710_P002 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab215850 Zm00028ab215850_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab215890 Zm00028ab215890_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab215890 Zm00028ab215890_P002 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab215890 Zm00028ab215890_P003 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab216000 Zm00028ab216000_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab216010 Zm00028ab216010_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab216010 Zm00028ab216010_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab216010 Zm00028ab216010_P003 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P003 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab216090 Zm00028ab216090_P004 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab216090 Zm00028ab216090_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab216320 Zm00028ab216320_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab216630 Zm00028ab216630_P002 viridiplantae LARABITOLUTIL-PWY xylitol degradation D-XYLULOSE-REDUCTASE-RXN EC-1.1.1.9 Zm00028ab216670 Zm00028ab216670_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab216830 Zm00028ab216830_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab216830 Zm00028ab216830_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P004 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P005 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab216890 Zm00028ab216890_P006 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab217150 Zm00028ab217150_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab217290 Zm00028ab217290_P001 ubiquitous TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab217300 Zm00028ab217300_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab217300 Zm00028ab217300_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab217450 Zm00028ab217450_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab217450 Zm00028ab217450_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab217450 Zm00028ab217450_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab217450 Zm00028ab217450_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab217570 Zm00028ab217570_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab217780 Zm00028ab217780_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217860 Zm00028ab217860_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217860 Zm00028ab217860_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217860 Zm00028ab217860_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217870 Zm00028ab217870_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217870 Zm00028ab217870_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217870 Zm00028ab217870_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab217880 Zm00028ab217880_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab217910 Zm00028ab217910_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab217970 Zm00028ab217970_P003 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab217990 Zm00028ab217990_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab217990 Zm00028ab217990_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab217990 Zm00028ab217990_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab217990 Zm00028ab217990_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab217990 Zm00028ab217990_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab218100 Zm00028ab218100_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab218110 Zm00028ab218110_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab218270 Zm00028ab218270_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab218300 Zm00028ab218300_P001 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab218300 Zm00028ab218300_P002 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab218300 Zm00028ab218300_P003 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab218300 Zm00028ab218300_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab218340 Zm00028ab218340_P002 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab218360 Zm00028ab218360_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab218530 Zm00028ab218530_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab218530 Zm00028ab218530_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab218550 Zm00028ab218550_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab218680 Zm00028ab218680_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab218680 Zm00028ab218680_P002 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00028ab218700 Zm00028ab218700_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab218860 Zm00028ab218860_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab218910 Zm00028ab218910_P001 NA PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00028ab219160 Zm00028ab219160_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219190 Zm00028ab219190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219190 Zm00028ab219190_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219190 Zm00028ab219190_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219190 Zm00028ab219190_P004 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab219240 Zm00028ab219240_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab219400 Zm00028ab219400_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab219410 Zm00028ab219410_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab219410 Zm00028ab219410_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab219410 Zm00028ab219410_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P002 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab219730 Zm00028ab219730_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219740 Zm00028ab219740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219740 Zm00028ab219740_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab219740 Zm00028ab219740_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab219780 Zm00028ab219780_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab219780 Zm00028ab219780_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab219780 Zm00028ab219780_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00028ab219780 Zm00028ab219780_P002 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab219830 Zm00028ab219830_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab219830 Zm00028ab219830_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab219990 Zm00028ab219990_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab219990 Zm00028ab219990_P002 NA PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab220090 Zm00028ab220090_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab220150 Zm00028ab220150_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab220150 Zm00028ab220150_P002 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab220220 Zm00028ab220220_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab220220 Zm00028ab220220_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab220220 Zm00028ab220220_P002 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab220220 Zm00028ab220220_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab220330 Zm00028ab220330_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab220460 Zm00028ab220460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab220460 Zm00028ab220460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab220460 Zm00028ab220460_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00028ab220540 Zm00028ab220540_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00028ab220540 Zm00028ab220540_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00028ab220540 Zm00028ab220540_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00028ab220540 Zm00028ab220540_P002 viridiplantae PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab220720 Zm00028ab220720_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab220720 Zm00028ab220720_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab220720 Zm00028ab220720_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00028ab220720 Zm00028ab220720_P004 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab220730 Zm00028ab220730_P001 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab221270 Zm00028ab221270_P002 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab221440 Zm00028ab221440_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab221440 Zm00028ab221440_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab221870 Zm00028ab221870_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab221870 Zm00028ab221870_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab221870 Zm00028ab221870_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab221870 Zm00028ab221870_P003 NA PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00028ab222080 Zm00028ab222080_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab222140 Zm00028ab222140_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab222420 Zm00028ab222420_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab222540 Zm00028ab222540_P004 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab222690 Zm00028ab222690_P004 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab222710 Zm00028ab222710_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab222710 Zm00028ab222710_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab222710 Zm00028ab222710_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab222710 Zm00028ab222710_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab222710 Zm00028ab222710_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab222710 Zm00028ab222710_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab222710 Zm00028ab222710_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab222710 Zm00028ab222710_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab222780 Zm00028ab222780_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab222780 Zm00028ab222780_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab222780 Zm00028ab222780_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab222780 Zm00028ab222780_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab222800 Zm00028ab222800_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab222820 Zm00028ab222820_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab222910 Zm00028ab222910_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00028ab222950 Zm00028ab222950_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab222990 Zm00028ab222990_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab222990 Zm00028ab222990_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab222990 Zm00028ab222990_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab223240 Zm00028ab223240_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab223240 Zm00028ab223240_P001 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab223260 Zm00028ab223260_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab223280 Zm00028ab223280_P001 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00028ab223380 Zm00028ab223380_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab223460 Zm00028ab223460_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab223660 Zm00028ab223660_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab224070 Zm00028ab224070_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab224070 Zm00028ab224070_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab224160 Zm00028ab224160_P001 NA PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab224260 Zm00028ab224260_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab224270 Zm00028ab224270_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00028ab224510 Zm00028ab224510_P002 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab224570 Zm00028ab224570_P001 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab224570 Zm00028ab224570_P002 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab224570 Zm00028ab224570_P003 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00028ab224570 Zm00028ab224570_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab224590 Zm00028ab224590_P001 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab224650 Zm00028ab224650_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab224650 Zm00028ab224650_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab224690 Zm00028ab224690_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab224740 Zm00028ab224740_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14026 EC-3.1.3.91 Zm00028ab224740 Zm00028ab224740_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab224900 Zm00028ab224900_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab224930 Zm00028ab224930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab224930 Zm00028ab224930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab224930 Zm00028ab224930_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab224940 Zm00028ab224940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab224940 Zm00028ab224940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab224940 Zm00028ab224940_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab225010 Zm00028ab225010_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab225010 Zm00028ab225010_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab225010 Zm00028ab225010_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab225010 Zm00028ab225010_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab225290 Zm00028ab225290_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab225290 Zm00028ab225290_P003 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P004 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P004 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab225290 Zm00028ab225290_P004 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00028ab225440 Zm00028ab225440_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab225660 Zm00028ab225660_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab225800 Zm00028ab225800_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab225800 Zm00028ab225800_P002 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab226130 Zm00028ab226130_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab226130 Zm00028ab226130_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab226130 Zm00028ab226130_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab226130 Zm00028ab226130_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P005 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00028ab226390 Zm00028ab226390_P006 expected GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab226900 Zm00028ab226900_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab226900 Zm00028ab226900_P002 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab226920 Zm00028ab226920_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab226980 Zm00028ab226980_P004 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab227070 Zm00028ab227070_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab227070 Zm00028ab227070_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab227070 Zm00028ab227070_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab227090 Zm00028ab227090_P003 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab227120 Zm00028ab227120_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab227120 Zm00028ab227120_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00028ab227120 Zm00028ab227120_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab227160 Zm00028ab227160_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab227410 Zm00028ab227410_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab227410 Zm00028ab227410_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab227410 Zm00028ab227410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab227410 Zm00028ab227410_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab227410 Zm00028ab227410_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab227600 Zm00028ab227600_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab227600 Zm00028ab227600_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00028ab227600 Zm00028ab227600_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00028ab227600 Zm00028ab227600_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab228000 Zm00028ab228000_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab228030 Zm00028ab228030_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab228030 Zm00028ab228030_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab228040 Zm00028ab228040_P005 ubiquitous PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab228450 Zm00028ab228450_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab228450 Zm00028ab228450_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab228570 Zm00028ab228570_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab228870 Zm00028ab228870_P002 conditional PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab228890 Zm00028ab228890_P003 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab228890 Zm00028ab228890_P003 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab228890 Zm00028ab228890_P003 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab228890 Zm00028ab228890_P003 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab229110 Zm00028ab229110_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab229110 Zm00028ab229110_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab229110 Zm00028ab229110_P003 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab229220 Zm00028ab229220_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab229220 Zm00028ab229220_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab229260 Zm00028ab229260_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab229260 Zm00028ab229260_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab229260 Zm00028ab229260_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab229670 Zm00028ab229670_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab229790 Zm00028ab229790_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab229880 Zm00028ab229880_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab229880 Zm00028ab229880_P002 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229980 Zm00028ab229980_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229990 Zm00028ab229990_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab229990 Zm00028ab229990_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229990 Zm00028ab229990_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab229990 Zm00028ab229990_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab230140 Zm00028ab230140_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab230220 Zm00028ab230220_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab230220 Zm00028ab230220_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab230220 Zm00028ab230220_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab230220 Zm00028ab230220_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab230260 Zm00028ab230260_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab230260 Zm00028ab230260_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab230260 Zm00028ab230260_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab230260 Zm00028ab230260_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab230260 Zm00028ab230260_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab230260 Zm00028ab230260_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab230680 Zm00028ab230680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab230680 Zm00028ab230680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab230680 Zm00028ab230680_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab230860 Zm00028ab230860_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab230860 Zm00028ab230860_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab230860 Zm00028ab230860_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab230880 Zm00028ab230880_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab230890 Zm00028ab230890_P001 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00028ab230950 Zm00028ab230950_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00028ab230950 Zm00028ab230950_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00028ab230950 Zm00028ab230950_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00028ab230950 Zm00028ab230950_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00028ab230950 Zm00028ab230950_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab230970 Zm00028ab230970_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab231220 Zm00028ab231220_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab231530 Zm00028ab231530_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab231550 Zm00028ab231550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab231550 Zm00028ab231550_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab231550 Zm00028ab231550_P003 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab231620 Zm00028ab231620_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab231620 Zm00028ab231620_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab231620 Zm00028ab231620_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab231620 Zm00028ab231620_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab231650 Zm00028ab231650_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab231670 Zm00028ab231670_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab231670 Zm00028ab231670_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab231670 Zm00028ab231670_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab231670 Zm00028ab231670_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab231790 Zm00028ab231790_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab231790 Zm00028ab231790_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab231830 Zm00028ab231830_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab231990 Zm00028ab231990_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab231990 Zm00028ab231990_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab232010 Zm00028ab232010_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab232010 Zm00028ab232010_P002 expected PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab232030 Zm00028ab232030_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab232030 Zm00028ab232030_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab232090 Zm00028ab232090_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab232190 Zm00028ab232190_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab232280 Zm00028ab232280_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab232290 Zm00028ab232290_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab232290 Zm00028ab232290_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab232290 Zm00028ab232290_P003 ubiquitous PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00028ab232440 Zm00028ab232440_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00028ab232440 Zm00028ab232440_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab232450 Zm00028ab232450_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab232490 Zm00028ab232490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232490 Zm00028ab232490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232490 Zm00028ab232490_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab232510 Zm00028ab232510_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232510 Zm00028ab232510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232510 Zm00028ab232510_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab232520 Zm00028ab232520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232520 Zm00028ab232520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232520 Zm00028ab232520_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab232550 Zm00028ab232550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232550 Zm00028ab232550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab232550 Zm00028ab232550_P001 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab232620 Zm00028ab232620_P001 expected PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00028ab233090 Zm00028ab233090_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab233140 Zm00028ab233140_P001 viridiplantae PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P004 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P005 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab233180 Zm00028ab233180_P006 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00028ab233230 Zm00028ab233230_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab233230 Zm00028ab233230_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab233350 Zm00028ab233350_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab233380 Zm00028ab233380_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab233380 Zm00028ab233380_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab233380 Zm00028ab233380_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab233560 Zm00028ab233560_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab233580 Zm00028ab233580_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab233580 Zm00028ab233580_P001 NA PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00028ab233700 Zm00028ab233700_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab233720 Zm00028ab233720_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00028ab233730 Zm00028ab233730_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab233770 Zm00028ab233770_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab233770 Zm00028ab233770_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab233770 Zm00028ab233770_P001 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab233990 Zm00028ab233990_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab233990 Zm00028ab233990_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab234090 Zm00028ab234090_P001 NA XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab234220 Zm00028ab234220_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab234570 Zm00028ab234570_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab234570 Zm00028ab234570_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab234630 Zm00028ab234630_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab234630 Zm00028ab234630_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab234630 Zm00028ab234630_P003 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab234840 Zm00028ab234840_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab234850 Zm00028ab234850_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab234870 Zm00028ab234870_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab234870 Zm00028ab234870_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab234930 Zm00028ab234930_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab235070 Zm00028ab235070_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab235070 Zm00028ab235070_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab235070 Zm00028ab235070_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab235070 Zm00028ab235070_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab235170 Zm00028ab235170_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab235170 Zm00028ab235170_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab235290 Zm00028ab235290_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab235290 Zm00028ab235290_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab235290 Zm00028ab235290_P001 conditional PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00028ab235310 Zm00028ab235310_P001 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00028ab235310 Zm00028ab235310_P002 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00028ab235310 Zm00028ab235310_P003 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00028ab235310 Zm00028ab235310_P004 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235490 Zm00028ab235490_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235500 Zm00028ab235500_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235500 Zm00028ab235500_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235500 Zm00028ab235500_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab235500 Zm00028ab235500_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab235570 Zm00028ab235570_P005 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P003 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P004 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P004 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P005 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab235590 Zm00028ab235590_P005 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P005 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab235590 Zm00028ab235590_P005 expected PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab235670 Zm00028ab235670_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab235670 Zm00028ab235670_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab235670 Zm00028ab235670_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab235670 Zm00028ab235670_P004 NA PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00028ab235840 Zm00028ab235840_P001 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00028ab235840 Zm00028ab235840_P002 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00028ab235840 Zm00028ab235840_P003 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00028ab235850 Zm00028ab235850_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab235880 Zm00028ab235880_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab235880 Zm00028ab235880_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab235880 Zm00028ab235880_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab235960 Zm00028ab235960_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab235960 Zm00028ab235960_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab236130 Zm00028ab236130_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab236130 Zm00028ab236130_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab236130 Zm00028ab236130_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab236130 Zm00028ab236130_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab236130 Zm00028ab236130_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab236180 Zm00028ab236180_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab236180 Zm00028ab236180_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00028ab236180 Zm00028ab236180_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00028ab236180 Zm00028ab236180_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab236510 Zm00028ab236510_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab236510 Zm00028ab236510_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab236510 Zm00028ab236510_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab236510 Zm00028ab236510_P001 expected BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab236600 Zm00028ab236600_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab236600 Zm00028ab236600_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab236600 Zm00028ab236600_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab236600 Zm00028ab236600_P003 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00028ab236640 Zm00028ab236640_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00028ab236640 Zm00028ab236640_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P003 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P003 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P003 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P003 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab236640 Zm00028ab236640_P003 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab236680 Zm00028ab236680_P002 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab236730 Zm00028ab236730_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab236730 Zm00028ab236730_P002 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab236780 Zm00028ab236780_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab236780 Zm00028ab236780_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab236800 Zm00028ab236800_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab236800 Zm00028ab236800_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00028ab236810 Zm00028ab236810_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00028ab236810 Zm00028ab236810_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab236830 Zm00028ab236830_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab236840 Zm00028ab236840_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab236840 Zm00028ab236840_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab236840 Zm00028ab236840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab236840 Zm00028ab236840_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab236840 Zm00028ab236840_P001 NA PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab236980 Zm00028ab236980_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab236980 Zm00028ab236980_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab236990 Zm00028ab236990_P001 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab237190 Zm00028ab237190_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab237190 Zm00028ab237190_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab237270 Zm00028ab237270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab237270 Zm00028ab237270_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab237310 Zm00028ab237310_P003 NA PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab237360 Zm00028ab237360_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab237360 Zm00028ab237360_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab237360 Zm00028ab237360_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab237360 Zm00028ab237360_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab237420 Zm00028ab237420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab237420 Zm00028ab237420_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab237450 Zm00028ab237450_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab237450 Zm00028ab237450_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab237450 Zm00028ab237450_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab237450 Zm00028ab237450_P004 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab237450 Zm00028ab237450_P005 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab237850 Zm00028ab237850_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab237850 Zm00028ab237850_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab237850 Zm00028ab237850_P003 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab237850 Zm00028ab237850_P004 viridiplantae PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00028ab238120 Zm00028ab238120_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00028ab238160 Zm00028ab238160_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00028ab238170 Zm00028ab238170_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00028ab238180 Zm00028ab238180_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00028ab238200 Zm00028ab238200_P001 expected PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P002 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P003 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P003 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P003 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P004 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P004 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab238270 Zm00028ab238270_P004 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00028ab238800 Zm00028ab238800_P001 expected PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00028ab238800 Zm00028ab238800_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab239060 Zm00028ab239060_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTINLIG-RXN EC-6.3.4.15 Zm00028ab239170 Zm00028ab239170_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab239180 Zm00028ab239180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab239180 Zm00028ab239180_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab239260 Zm00028ab239260_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab239260 Zm00028ab239260_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab239260 Zm00028ab239260_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab239340 Zm00028ab239340_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab239340 Zm00028ab239340_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00028ab239340 Zm00028ab239340_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab239400 Zm00028ab239400_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab239440 Zm00028ab239440_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab239440 Zm00028ab239440_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab239440 Zm00028ab239440_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab239530 Zm00028ab239530_P004 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab239670 Zm00028ab239670_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab239670 Zm00028ab239670_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab239670 Zm00028ab239670_P001 ubiquitous PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00028ab239700 Zm00028ab239700_P002 expected PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab240150 Zm00028ab240150_P001 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab240490 Zm00028ab240490_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab240490 Zm00028ab240490_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab240490 Zm00028ab240490_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab240500 Zm00028ab240500_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab240500 Zm00028ab240500_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab240500 Zm00028ab240500_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab240500 Zm00028ab240500_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab240770 Zm00028ab240770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab240770 Zm00028ab240770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab240770 Zm00028ab240770_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab240890 Zm00028ab240890_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab240980 Zm00028ab240980_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab240980 Zm00028ab240980_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab240980 Zm00028ab240980_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab240980 Zm00028ab240980_P002 conditional PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab241180 Zm00028ab241180_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab241180 Zm00028ab241180_P003 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab241190 Zm00028ab241190_P001 expected PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab241260 Zm00028ab241260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab241260 Zm00028ab241260_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab241280 Zm00028ab241280_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab241280 Zm00028ab241280_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab241280 Zm00028ab241280_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab241340 Zm00028ab241340_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab241340 Zm00028ab241340_P002 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00028ab241570 Zm00028ab241570_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00028ab241570 Zm00028ab241570_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab241630 Zm00028ab241630_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab241860 Zm00028ab241860_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab241870 Zm00028ab241870_P001 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab242490 Zm00028ab242490_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab242490 Zm00028ab242490_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab242490 Zm00028ab242490_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab242490 Zm00028ab242490_P001 conditional PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab243090 Zm00028ab243090_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab243090 Zm00028ab243090_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab243090 Zm00028ab243090_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab243090 Zm00028ab243090_P004 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab243100 Zm00028ab243100_P004 ubiquitous TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00028ab243150 Zm00028ab243150_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00028ab243150 Zm00028ab243150_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab243370 Zm00028ab243370_P002 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab243390 Zm00028ab243390_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab243410 Zm00028ab243410_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab243700 Zm00028ab243700_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab243700 Zm00028ab243700_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab243700 Zm00028ab243700_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DUTP-PYROP-RXN EC-3.6.1.23 Zm00028ab243700 Zm00028ab243700_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab243790 Zm00028ab243790_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab243790 Zm00028ab243790_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab243790 Zm00028ab243790_P001 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab244070 Zm00028ab244070_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab244090 Zm00028ab244090_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab244090 Zm00028ab244090_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab244090 Zm00028ab244090_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab244090 Zm00028ab244090_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab244280 Zm00028ab244280_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab244280 Zm00028ab244280_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab244280 Zm00028ab244280_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab244280 Zm00028ab244280_P004 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00028ab244390 Zm00028ab244390_P005 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab244410 Zm00028ab244410_P003 expected PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab244470 Zm00028ab244470_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab244480 Zm00028ab244480_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab244480 Zm00028ab244480_P001 conditional PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P001 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P002 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P003 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P004 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P005 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P006 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00028ab244590 Zm00028ab244590_P006 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab244820 Zm00028ab244820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab244820 Zm00028ab244820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab244820 Zm00028ab244820_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab245320 Zm00028ab245320_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab245320 Zm00028ab245320_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab245490 Zm00028ab245490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab245490 Zm00028ab245490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab245490 Zm00028ab245490_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab245760 Zm00028ab245760_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab245860 Zm00028ab245860_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab245860 Zm00028ab245860_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab245860 Zm00028ab245860_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab245860 Zm00028ab245860_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245890 Zm00028ab245890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245890 Zm00028ab245890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245890 Zm00028ab245890_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245900 Zm00028ab245900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245900 Zm00028ab245900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245900 Zm00028ab245900_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245940 Zm00028ab245940_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab245960 Zm00028ab245960_P004 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab246050 Zm00028ab246050_P003 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab246320 Zm00028ab246320_P001 expected PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00028ab246510 Zm00028ab246510_P005 NA PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab246570 Zm00028ab246570_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab246570 Zm00028ab246570_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab246840 Zm00028ab246840_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab246840 Zm00028ab246840_P002 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab246910 Zm00028ab246910_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab246910 Zm00028ab246910_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab246910 Zm00028ab246910_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab246920 Zm00028ab246920_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab246920 Zm00028ab246920_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab246920 Zm00028ab246920_P001 NA PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00028ab246930 Zm00028ab246930_P001 conditional PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00028ab246930 Zm00028ab246930_P002 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab246940 Zm00028ab246940_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab247180 Zm00028ab247180_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab247300 Zm00028ab247300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab247300 Zm00028ab247300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab247300 Zm00028ab247300_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab247340 Zm00028ab247340_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab247400 Zm00028ab247400_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab247400 Zm00028ab247400_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247680 Zm00028ab247680_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247680 Zm00028ab247680_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247690 Zm00028ab247690_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247690 Zm00028ab247690_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab247720 Zm00028ab247720_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247730 Zm00028ab247730_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247730 Zm00028ab247730_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247740 Zm00028ab247740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247740 Zm00028ab247740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247760 Zm00028ab247760_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247760 Zm00028ab247760_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247770 Zm00028ab247770_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247770 Zm00028ab247770_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247790 Zm00028ab247790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247790 Zm00028ab247790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247850 Zm00028ab247850_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247850 Zm00028ab247850_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab247860 Zm00028ab247860_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab247860 Zm00028ab247860_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab247890 Zm00028ab247890_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab247920 Zm00028ab247920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab247940 Zm00028ab247940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab247940 Zm00028ab247940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab247940 Zm00028ab247940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab247960 Zm00028ab247960_P001 viridiplantae PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00028ab248100 Zm00028ab248100_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00028ab248100 Zm00028ab248100_P001 ubiquitous PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00028ab248100 Zm00028ab248100_P002 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00028ab248100 Zm00028ab248100_P002 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab248140 Zm00028ab248140_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab248140 Zm00028ab248140_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab248140 Zm00028ab248140_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab248170 Zm00028ab248170_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab248170 Zm00028ab248170_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab248170 Zm00028ab248170_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab248220 Zm00028ab248220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab248220 Zm00028ab248220_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00028ab248250 Zm00028ab248250_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00028ab248250 Zm00028ab248250_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00028ab248250 Zm00028ab248250_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00028ab248250 Zm00028ab248250_P004 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab248370 Zm00028ab248370_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab248370 Zm00028ab248370_P001 excluded PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab248590 Zm00028ab248590_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab248700 Zm00028ab248700_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab248780 Zm00028ab248780_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab248780 Zm00028ab248780_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab248880 Zm00028ab248880_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab248880 Zm00028ab248880_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab248880 Zm00028ab248880_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab248880 Zm00028ab248880_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab248880 Zm00028ab248880_P005 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab248950 Zm00028ab248950_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab248950 Zm00028ab248950_P002 ubiquitous VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab249040 Zm00028ab249040_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab249040 Zm00028ab249040_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab249150 Zm00028ab249150_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab249150 Zm00028ab249150_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab249180 Zm00028ab249180_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab249190 Zm00028ab249190_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00028ab249190 Zm00028ab249190_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00028ab249380 Zm00028ab249380_P001 viridiplantae PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab249520 Zm00028ab249520_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab249520 Zm00028ab249520_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab249520 Zm00028ab249520_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab249520 Zm00028ab249520_P002 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab249520 Zm00028ab249520_P002 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab249620 Zm00028ab249620_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab249620 Zm00028ab249620_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab249860 Zm00028ab249860_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab249880 Zm00028ab249880_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab249900 Zm00028ab249900_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00028ab250040 Zm00028ab250040_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00028ab250040 Zm00028ab250040_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab250070 Zm00028ab250070_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab250280 Zm00028ab250280_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab250580 Zm00028ab250580_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab250780 Zm00028ab250780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab250780 Zm00028ab250780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab250780 Zm00028ab250780_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab250820 Zm00028ab250820_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab250820 Zm00028ab250820_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab250820 Zm00028ab250820_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab250820 Zm00028ab250820_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab250820 Zm00028ab250820_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab250840 Zm00028ab250840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab250840 Zm00028ab250840_P002 NA PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00028ab250890 Zm00028ab250890_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab250960 Zm00028ab250960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab251100 Zm00028ab251100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab251100 Zm00028ab251100_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab251130 Zm00028ab251130_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab251230 Zm00028ab251230_P002 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab251260 Zm00028ab251260_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab251280 Zm00028ab251280_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab251280 Zm00028ab251280_P002 conditional HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab251400 Zm00028ab251400_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00028ab251400 Zm00028ab251400_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00028ab251450 Zm00028ab251450_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00028ab251450 Zm00028ab251450_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab251450 Zm00028ab251450_P005 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00028ab251450 Zm00028ab251450_P005 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00028ab251500 Zm00028ab251500_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00028ab251500 Zm00028ab251500_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00028ab251500 Zm00028ab251500_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab251800 Zm00028ab251800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab251800 Zm00028ab251800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab251800 Zm00028ab251800_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab251880 Zm00028ab251880_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab251880 Zm00028ab251880_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab251880 Zm00028ab251880_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab251880 Zm00028ab251880_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab251880 Zm00028ab251880_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab251880 Zm00028ab251880_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab251880 Zm00028ab251880_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab251880 Zm00028ab251880_P004 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab251920 Zm00028ab251920_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00028ab252090 Zm00028ab252090_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00028ab252090 Zm00028ab252090_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab252120 Zm00028ab252120_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab252120 Zm00028ab252120_P002 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab252210 Zm00028ab252210_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab252350 Zm00028ab252350_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00028ab252350 Zm00028ab252350_P001 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab252610 Zm00028ab252610_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab252620 Zm00028ab252620_P001 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab252880 Zm00028ab252880_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab252900 Zm00028ab252900_P001 ubiquitous PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab253100 Zm00028ab253100_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab253360 Zm00028ab253360_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab253590 Zm00028ab253590_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab253590 Zm00028ab253590_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab253590 Zm00028ab253590_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab253650 Zm00028ab253650_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab253650 Zm00028ab253650_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P004 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab253670 Zm00028ab253670_P005 conditional PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00028ab253810 Zm00028ab253810_P001 expected PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00028ab253810 Zm00028ab253810_P002 expected PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00028ab253810 Zm00028ab253810_P003 expected PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00028ab253820 Zm00028ab253820_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab253850 Zm00028ab253850_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab253850 Zm00028ab253850_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab253910 Zm00028ab253910_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab253910 Zm00028ab253910_P002 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab253930 Zm00028ab253930_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab253930 Zm00028ab253930_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab253930 Zm00028ab253930_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab253930 Zm00028ab253930_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab253960 Zm00028ab253960_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab253960 Zm00028ab253960_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab253960 Zm00028ab253960_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab253960 Zm00028ab253960_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00028ab254040 Zm00028ab254040_P003 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab254220 Zm00028ab254220_P005 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab254370 Zm00028ab254370_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00028ab254390 Zm00028ab254390_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab254720 Zm00028ab254720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab254860 Zm00028ab254860_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P002 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab254950 Zm00028ab254950_P003 NA PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00028ab255100 Zm00028ab255100_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab255300 Zm00028ab255300_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab255300 Zm00028ab255300_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab255460 Zm00028ab255460_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00028ab255630 Zm00028ab255630_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P002 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00028ab255630 Zm00028ab255630_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P003 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P003 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00028ab255630 Zm00028ab255630_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P004 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab255630 Zm00028ab255630_P004 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00028ab255630 Zm00028ab255630_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab255960 Zm00028ab255960_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab256190 Zm00028ab256190_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab256520 Zm00028ab256520_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab256520 Zm00028ab256520_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256530 Zm00028ab256530_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256530 Zm00028ab256530_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256530 Zm00028ab256530_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256530 Zm00028ab256530_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256530 Zm00028ab256530_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256540 Zm00028ab256540_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256540 Zm00028ab256540_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6383 EC-4.2.1.116 Zm00028ab256540 Zm00028ab256540_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256540 Zm00028ab256540_P004 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6383 EC-4.2.1.116 Zm00028ab256540 Zm00028ab256540_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00028ab256540 Zm00028ab256540_P006 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab256570 Zm00028ab256570_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab256570 Zm00028ab256570_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab256570 Zm00028ab256570_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab256570 Zm00028ab256570_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab256570 Zm00028ab256570_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab256900 Zm00028ab256900_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab256900 Zm00028ab256900_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab256900 Zm00028ab256900_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab257060 Zm00028ab257060_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab257070 Zm00028ab257070_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab257070 Zm00028ab257070_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00028ab257160 Zm00028ab257160_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab257290 Zm00028ab257290_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab257510 Zm00028ab257510_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab257640 Zm00028ab257640_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P003 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P004 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P004 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab257670 Zm00028ab257670_P004 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYRHAMREDUCT-RXN EC-1.1.1.133 Zm00028ab257780 Zm00028ab257780_P001 conditional DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYDRHAMEPIM-RXN EC-5.1.3.13 Zm00028ab257780 Zm00028ab257780_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab257850 Zm00028ab257850_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00028ab257860 Zm00028ab257860_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00028ab257860 Zm00028ab257860_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab257880 Zm00028ab257880_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab258140 Zm00028ab258140_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab258150 Zm00028ab258150_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab258180 Zm00028ab258180_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00028ab258320 Zm00028ab258320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00028ab258320 Zm00028ab258320_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00028ab258320 Zm00028ab258320_P003 viridiplantae PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00028ab258350 Zm00028ab258350_P001 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00028ab258350 Zm00028ab258350_P002 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00028ab258350 Zm00028ab258350_P003 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00028ab258350 Zm00028ab258350_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab258480 Zm00028ab258480_P001 expected GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00028ab258620 Zm00028ab258620_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00028ab258620 Zm00028ab258620_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00028ab258620 Zm00028ab258620_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab258770 Zm00028ab258770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab258770 Zm00028ab258770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab258770 Zm00028ab258770_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab258870 Zm00028ab258870_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab258870 Zm00028ab258870_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab258870 Zm00028ab258870_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab258920 Zm00028ab258920_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab258920 Zm00028ab258920_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab258920 Zm00028ab258920_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00028ab258920 Zm00028ab258920_P002 conditional PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab259070 Zm00028ab259070_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00028ab259070 Zm00028ab259070_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab259230 Zm00028ab259230_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab259230 Zm00028ab259230_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab259230 Zm00028ab259230_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab259230 Zm00028ab259230_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab259340 Zm00028ab259340_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab259350 Zm00028ab259350_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab259350 Zm00028ab259350_P002 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab259370 Zm00028ab259370_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P002 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P003 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P003 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P004 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P004 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P004 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P005 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P005 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab259590 Zm00028ab259590_P005 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab259600 Zm00028ab259600_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab259630 Zm00028ab259630_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab259630 Zm00028ab259630_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab259630 Zm00028ab259630_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab259630 Zm00028ab259630_P004 NA HISTSYN-PWY L-histidine biosynthesis HISTAMINOTRANS-RXN EC-2.6.1.9 Zm00028ab259680 Zm00028ab259680_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTAMINOTRANS-RXN EC-2.6.1.9 Zm00028ab259680 Zm00028ab259680_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab259880 Zm00028ab259880_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab259880 Zm00028ab259880_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab259920 Zm00028ab259920_P001 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab259930 Zm00028ab259930_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab259930 Zm00028ab259930_P002 ubiquitous PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab259960 Zm00028ab259960_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab259960 Zm00028ab259960_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab259960 Zm00028ab259960_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab259960 Zm00028ab259960_P004 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab259990 Zm00028ab259990_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab259990 Zm00028ab259990_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab259990 Zm00028ab259990_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab260400 Zm00028ab260400_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab260400 Zm00028ab260400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab260550 Zm00028ab260550_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab260560 Zm00028ab260560_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab260560 Zm00028ab260560_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab260960 Zm00028ab260960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab260960 Zm00028ab260960_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab261020 Zm00028ab261020_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab261020 Zm00028ab261020_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab261020 Zm00028ab261020_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab261130 Zm00028ab261130_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab261130 Zm00028ab261130_P002 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261140 Zm00028ab261140_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261140 Zm00028ab261140_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261140 Zm00028ab261140_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261150 Zm00028ab261150_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261150 Zm00028ab261150_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab261150 Zm00028ab261150_P003 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab261210 Zm00028ab261210_P004 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab261310 Zm00028ab261310_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab261310 Zm00028ab261310_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00028ab261310 Zm00028ab261310_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00028ab261310 Zm00028ab261310_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab261460 Zm00028ab261460_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab261480 Zm00028ab261480_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab261480 Zm00028ab261480_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab261580 Zm00028ab261580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab261580 Zm00028ab261580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab261580 Zm00028ab261580_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab261760 Zm00028ab261760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab261760 Zm00028ab261760_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab261760 Zm00028ab261760_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab261760 Zm00028ab261760_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab261760 Zm00028ab261760_P005 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab261890 Zm00028ab261890_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab262000 Zm00028ab262000_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab262000 Zm00028ab262000_P002 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab262010 Zm00028ab262010_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab262010 Zm00028ab262010_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab262010 Zm00028ab262010_P003 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00028ab262360 Zm00028ab262360_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab262400 Zm00028ab262400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab262400 Zm00028ab262400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab262410 Zm00028ab262410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab262410 Zm00028ab262410_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab262610 Zm00028ab262610_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab262640 Zm00028ab262640_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab262640 Zm00028ab262640_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00028ab262780 Zm00028ab262780_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00028ab262780 Zm00028ab262780_P003 conditional PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00028ab263350 Zm00028ab263350_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab263510 Zm00028ab263510_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab263520 Zm00028ab263520_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab263710 Zm00028ab263710_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab263760 Zm00028ab263760_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab263760 Zm00028ab263760_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab263760 Zm00028ab263760_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab264070 Zm00028ab264070_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab264120 Zm00028ab264120_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab264210 Zm00028ab264210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab264210 Zm00028ab264210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab264210 Zm00028ab264210_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab264250 Zm00028ab264250_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab264250 Zm00028ab264250_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab264250 Zm00028ab264250_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab264250 Zm00028ab264250_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab264260 Zm00028ab264260_P003 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P002 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P002 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P003 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264500 Zm00028ab264500_P003 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264510 Zm00028ab264510_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00028ab264510 Zm00028ab264510_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab264730 Zm00028ab264730_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab264730 Zm00028ab264730_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab264730 Zm00028ab264730_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab264730 Zm00028ab264730_P004 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab264820 Zm00028ab264820_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab264820 Zm00028ab264820_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab264820 Zm00028ab264820_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab264820 Zm00028ab264820_P002 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab264880 Zm00028ab264880_P001 viridiplantae PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab265100 Zm00028ab265100_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab265100 Zm00028ab265100_P002 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab265100 Zm00028ab265100_P003 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00028ab265100 Zm00028ab265100_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab265200 Zm00028ab265200_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab265240 Zm00028ab265240_P001 expected PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00028ab265450 Zm00028ab265450_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P001 manual GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab265720 Zm00028ab265720_P002 manual PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P003 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P004 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P004 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P005 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00028ab265850 Zm00028ab265850_P005 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab265980 Zm00028ab265980_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab265980 Zm00028ab265980_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab266000 Zm00028ab266000_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab266000 Zm00028ab266000_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab266000 Zm00028ab266000_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P003 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab266060 Zm00028ab266060_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab266140 Zm00028ab266140_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) RXN-2962 EC-1.1.1.284 Zm00028ab266140 Zm00028ab266140_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab266150 Zm00028ab266150_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab266150 Zm00028ab266150_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab266340 Zm00028ab266340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab266370 Zm00028ab266370_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab266450 Zm00028ab266450_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00028ab266590 Zm00028ab266590_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00028ab266590 Zm00028ab266590_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab266900 Zm00028ab266900_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis HOMOSERKIN-RXN EC-2.7.1.39 Zm00028ab267070 Zm00028ab267070_P001 viridiplantae PWY-702 L-methionine biosynthesis II (plants) HOMOSERKIN-RXN EC-2.7.1.39 Zm00028ab267070 Zm00028ab267070_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab267100 Zm00028ab267100_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab267100 Zm00028ab267100_P002 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab267230 Zm00028ab267230_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab267230 Zm00028ab267230_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab267230 Zm00028ab267230_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab267230 Zm00028ab267230_P001 NA PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab267350 Zm00028ab267350_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab267460 Zm00028ab267460_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab267460 Zm00028ab267460_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab267460 Zm00028ab267460_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab267500 Zm00028ab267500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab267500 Zm00028ab267500_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab267500 Zm00028ab267500_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab267630 Zm00028ab267630_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab267930 Zm00028ab267930_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab267930 Zm00028ab267930_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab267930 Zm00028ab267930_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab267930 Zm00028ab267930_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab268000 Zm00028ab268000_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab268000 Zm00028ab268000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab268120 Zm00028ab268120_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab268120 Zm00028ab268120_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab268120 Zm00028ab268120_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab268230 Zm00028ab268230_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab268230 Zm00028ab268230_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab268230 Zm00028ab268230_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab268300 Zm00028ab268300_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab268390 Zm00028ab268390_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab268390 Zm00028ab268390_P002 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab268420 Zm00028ab268420_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab268710 Zm00028ab268710_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab268730 Zm00028ab268730_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab268780 Zm00028ab268780_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab268800 Zm00028ab268800_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab268900 Zm00028ab268900_P002 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab269090 Zm00028ab269090_P003 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab269250 Zm00028ab269250_P001 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00028ab269480 Zm00028ab269480_P003 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P001 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P001 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P002 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P002 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P003 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00028ab269580 Zm00028ab269580_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab270680 Zm00028ab270680_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab270730 Zm00028ab270730_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab270730 Zm00028ab270730_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab270730 Zm00028ab270730_P001 manual PWY-2541 phytosterol biosynthesis (plants) RXN-4243 EC-1.14.19.41 Zm00028ab270900 Zm00028ab270900_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab271180 Zm00028ab271180_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab271180 Zm00028ab271180_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab271260 Zm00028ab271260_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab271260 Zm00028ab271260_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab271260 Zm00028ab271260_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab271260 Zm00028ab271260_P002 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab271290 Zm00028ab271290_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab271290 Zm00028ab271290_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab271290 Zm00028ab271290_P003 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab271360 Zm00028ab271360_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab271360 Zm00028ab271360_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab271530 Zm00028ab271530_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab271530 Zm00028ab271530_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab271530 Zm00028ab271530_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab271560 Zm00028ab271560_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab271590 Zm00028ab271590_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00028ab271620 Zm00028ab271620_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00028ab271620 Zm00028ab271620_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00028ab271620 Zm00028ab271620_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00028ab271690 Zm00028ab271690_P004 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00028ab271710 Zm00028ab271710_P004 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab271910 Zm00028ab271910_P006 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab272010 Zm00028ab272010_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab272010 Zm00028ab272010_P002 expected PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00028ab272050 Zm00028ab272050_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00028ab272050 Zm00028ab272050_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00028ab272050 Zm00028ab272050_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00028ab272050 Zm00028ab272050_P004 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab272410 Zm00028ab272410_P001 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00028ab272590 Zm00028ab272590_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00028ab272590 Zm00028ab272590_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P004 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P005 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab272790 Zm00028ab272790_P005 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab272790 Zm00028ab272790_P006 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab272810 Zm00028ab272810_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab272810 Zm00028ab272810_P002 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab273030 Zm00028ab273030_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab273030 Zm00028ab273030_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab273030 Zm00028ab273030_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab273030 Zm00028ab273030_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab273170 Zm00028ab273170_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab273170 Zm00028ab273170_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab273170 Zm00028ab273170_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab273200 Zm00028ab273200_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab273200 Zm00028ab273200_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab273200 Zm00028ab273200_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab273260 Zm00028ab273260_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab273450 Zm00028ab273450_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab273670 Zm00028ab273670_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab273670 Zm00028ab273670_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab273670 Zm00028ab273670_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab273670 Zm00028ab273670_P002 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab273990 Zm00028ab273990_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab274070 Zm00028ab274070_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab274070 Zm00028ab274070_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00028ab274070 Zm00028ab274070_P003 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab274650 Zm00028ab274650_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab274660 Zm00028ab274660_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab274670 Zm00028ab274670_P001 conditional PWY-7212 baicalein metabolism RXN-11755 EC-2.4.1.253 Zm00028ab274750 Zm00028ab274750_P001 conditional PWY-7213 wogonin metabolism RXN-14060 EC-2.4.1.253 Zm00028ab274750 Zm00028ab274750_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab274980 Zm00028ab274980_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab275000 Zm00028ab275000_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab275000 Zm00028ab275000_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab275020 Zm00028ab275020_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab275170 Zm00028ab275170_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab275170 Zm00028ab275170_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab275170 Zm00028ab275170_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab275170 Zm00028ab275170_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab275230 Zm00028ab275230_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab275240 Zm00028ab275240_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab275530 Zm00028ab275530_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab275560 Zm00028ab275560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab275560 Zm00028ab275560_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P006 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P007 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00028ab275590 Zm00028ab275590_P008 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab275850 Zm00028ab275850_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab275850 Zm00028ab275850_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab275850 Zm00028ab275850_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab275850 Zm00028ab275850_P001 NA PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab275930 Zm00028ab275930_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab275940 Zm00028ab275940_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab275950 Zm00028ab275950_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab276140 Zm00028ab276140_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab276160 Zm00028ab276160_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab276330 Zm00028ab276330_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00028ab276330 Zm00028ab276330_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab276330 Zm00028ab276330_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00028ab276330 Zm00028ab276330_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00028ab276330 Zm00028ab276330_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00028ab276570 Zm00028ab276570_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00028ab276570 Zm00028ab276570_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab276820 Zm00028ab276820_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab276940 Zm00028ab276940_P001 conditional PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00028ab277000 Zm00028ab277000_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab277090 Zm00028ab277090_P004 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab277240 Zm00028ab277240_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab277240 Zm00028ab277240_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab277260 Zm00028ab277260_P005 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab277350 Zm00028ab277350_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab277350 Zm00028ab277350_P001 conditional PWY-5284 shisonin biosynthesis RXN-8204 EC-2.3.1.215 Zm00028ab277400 Zm00028ab277400_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8204 EC-2.3.1.215 Zm00028ab277400 Zm00028ab277400_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab277580 Zm00028ab277580_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab277580 Zm00028ab277580_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab277670 Zm00028ab277670_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab277670 Zm00028ab277670_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab277670 Zm00028ab277670_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab277850 Zm00028ab277850_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab277900 Zm00028ab277900_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab277900 Zm00028ab277900_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab277900 Zm00028ab277900_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab277920 Zm00028ab277920_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab277920 Zm00028ab277920_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab277920 Zm00028ab277920_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab277940 Zm00028ab277940_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab277940 Zm00028ab277940_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab277940 Zm00028ab277940_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab277980 Zm00028ab277980_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab277980 Zm00028ab277980_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab277980 Zm00028ab277980_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab278120 Zm00028ab278120_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab278120 Zm00028ab278120_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab278170 Zm00028ab278170_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab278170 Zm00028ab278170_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab278400 Zm00028ab278400_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab278420 Zm00028ab278420_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab278420 Zm00028ab278420_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab278420 Zm00028ab278420_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab278420 Zm00028ab278420_P004 NA PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab278450 Zm00028ab278450_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab278450 Zm00028ab278450_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab278470 Zm00028ab278470_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab278470 Zm00028ab278470_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab278500 Zm00028ab278500_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00028ab278690 Zm00028ab278690_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab278690 Zm00028ab278690_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab278690 Zm00028ab278690_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00028ab278690 Zm00028ab278690_P001 ubiquitous PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab278720 Zm00028ab278720_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab278720 Zm00028ab278720_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab278720 Zm00028ab278720_P003 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00028ab278820 Zm00028ab278820_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab278920 Zm00028ab278920_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab278920 Zm00028ab278920_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab278920 Zm00028ab278920_P003 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab279000 Zm00028ab279000_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab279020 Zm00028ab279020_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab279030 Zm00028ab279030_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab279150 Zm00028ab279150_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab279150 Zm00028ab279150_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab279150 Zm00028ab279150_P003 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab279390 Zm00028ab279390_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab279640 Zm00028ab279640_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab279640 Zm00028ab279640_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00028ab279660 Zm00028ab279660_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab279800 Zm00028ab279800_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab279860 Zm00028ab279860_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab279950 Zm00028ab279950_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab279950 Zm00028ab279950_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab279950 Zm00028ab279950_P004 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P002 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00028ab279970 Zm00028ab279970_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab279970 Zm00028ab279970_P004 conditional PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P001 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P002 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P003 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P004 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00028ab280070 Zm00028ab280070_P005 NA PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00028ab280130 Zm00028ab280130_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00028ab280130 Zm00028ab280130_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00028ab280130 Zm00028ab280130_P003 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00028ab280130 Zm00028ab280130_P004 expected PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00028ab280130 Zm00028ab280130_P005 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab280250 Zm00028ab280250_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab280480 Zm00028ab280480_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab280990 Zm00028ab280990_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab280990 Zm00028ab280990_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab280990 Zm00028ab280990_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab280990 Zm00028ab280990_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab280990 Zm00028ab280990_P005 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab281180 Zm00028ab281180_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P002 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P002 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P002 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P003 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P003 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P003 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab281260 Zm00028ab281260_P003 excluded PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab281940 Zm00028ab281940_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab281940 Zm00028ab281940_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab282120 Zm00028ab282120_P005 ubiquitous SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab282400 Zm00028ab282400_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab282400 Zm00028ab282400_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab282400 Zm00028ab282400_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab282400 Zm00028ab282400_P002 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab282470 Zm00028ab282470_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00028ab282470 Zm00028ab282470_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00028ab282470 Zm00028ab282470_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab282680 Zm00028ab282680_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab282680 Zm00028ab282680_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab282680 Zm00028ab282680_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab282740 Zm00028ab282740_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab282740 Zm00028ab282740_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab282740 Zm00028ab282740_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab282740 Zm00028ab282740_P004 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab282740 Zm00028ab282740_P005 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab282920 Zm00028ab282920_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab282920 Zm00028ab282920_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab282920 Zm00028ab282920_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab283440 Zm00028ab283440_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab283460 Zm00028ab283460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab283460 Zm00028ab283460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab283460 Zm00028ab283460_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab283650 Zm00028ab283650_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab283650 Zm00028ab283650_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab283660 Zm00028ab283660_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab283660 Zm00028ab283660_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab283710 Zm00028ab283710_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab283710 Zm00028ab283710_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab283710 Zm00028ab283710_P001 manual PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab283770 Zm00028ab283770_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab283770 Zm00028ab283770_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab283770 Zm00028ab283770_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab283770 Zm00028ab283770_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab283770 Zm00028ab283770_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab283780 Zm00028ab283780_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab283780 Zm00028ab283780_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab283780 Zm00028ab283780_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab283780 Zm00028ab283780_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab283780 Zm00028ab283780_P001 NA PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab283870 Zm00028ab283870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00028ab283870 Zm00028ab283870_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284020 Zm00028ab284020_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284030 Zm00028ab284030_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab284050 Zm00028ab284050_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284060 Zm00028ab284060_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284070 Zm00028ab284070_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284150 Zm00028ab284150_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284160 Zm00028ab284160_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284170 Zm00028ab284170_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab284200 Zm00028ab284200_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab284290 Zm00028ab284290_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab284300 Zm00028ab284300_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab284300 Zm00028ab284300_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab284300 Zm00028ab284300_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab284620 Zm00028ab284620_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab284680 Zm00028ab284680_P004 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab284700 Zm00028ab284700_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab284700 Zm00028ab284700_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab284700 Zm00028ab284700_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab284700 Zm00028ab284700_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab284700 Zm00028ab284700_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab284700 Zm00028ab284700_P002 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab284710 Zm00028ab284710_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab284710 Zm00028ab284710_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab284720 Zm00028ab284720_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab284720 Zm00028ab284720_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab284720 Zm00028ab284720_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab284720 Zm00028ab284720_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab284720 Zm00028ab284720_P001 NA PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab284780 Zm00028ab284780_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab284830 Zm00028ab284830_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab284840 Zm00028ab284840_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab284840 Zm00028ab284840_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab284860 Zm00028ab284860_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab284860 Zm00028ab284860_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab284860 Zm00028ab284860_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab284860 Zm00028ab284860_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00028ab285090 Zm00028ab285090_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab285190 Zm00028ab285190_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab285190 Zm00028ab285190_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab285190 Zm00028ab285190_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab285270 Zm00028ab285270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab285270 Zm00028ab285270_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab285310 Zm00028ab285310_P006 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P004 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab285470 Zm00028ab285470_P005 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00028ab285530 Zm00028ab285530_P001 conditional PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00028ab285530 Zm00028ab285530_P002 conditional PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00028ab285530 Zm00028ab285530_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab285630 Zm00028ab285630_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab285630 Zm00028ab285630_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab285630 Zm00028ab285630_P003 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab285690 Zm00028ab285690_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab285820 Zm00028ab285820_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab285820 Zm00028ab285820_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab285920 Zm00028ab285920_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab285920 Zm00028ab285920_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab285920 Zm00028ab285920_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab285920 Zm00028ab285920_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab285970 Zm00028ab285970_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab285970 Zm00028ab285970_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab285970 Zm00028ab285970_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab285970 Zm00028ab285970_P004 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00028ab286100 Zm00028ab286100_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P001 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00028ab286100 Zm00028ab286100_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab286100 Zm00028ab286100_P002 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab286360 Zm00028ab286360_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab286450 Zm00028ab286450_P001 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab286710 Zm00028ab286710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab286840 Zm00028ab286840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab286840 Zm00028ab286840_P002 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab286970 Zm00028ab286970_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab286970 Zm00028ab286970_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab287070 Zm00028ab287070_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab287070 Zm00028ab287070_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab287160 Zm00028ab287160_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab287210 Zm00028ab287210_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab287210 Zm00028ab287210_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab287210 Zm00028ab287210_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab287210 Zm00028ab287210_P004 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P004 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab287210 Zm00028ab287210_P005 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab287210 Zm00028ab287210_P005 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287360 Zm00028ab287360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287360 Zm00028ab287360_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab287580 Zm00028ab287580_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab287580 Zm00028ab287580_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab287580 Zm00028ab287580_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab287640 Zm00028ab287640_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab287640 Zm00028ab287640_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab287680 Zm00028ab287680_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab287700 Zm00028ab287700_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab287710 Zm00028ab287710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287750 Zm00028ab287750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287750 Zm00028ab287750_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287750 Zm00028ab287750_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287750 Zm00028ab287750_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab287750 Zm00028ab287750_P005 viridiplantae PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00028ab287770 Zm00028ab287770_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab288110 Zm00028ab288110_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab288110 Zm00028ab288110_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab288110 Zm00028ab288110_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab288130 Zm00028ab288130_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00028ab288170 Zm00028ab288170_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab288170 Zm00028ab288170_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab288170 Zm00028ab288170_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00028ab288170 Zm00028ab288170_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab288220 Zm00028ab288220_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab288220 Zm00028ab288220_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab288220 Zm00028ab288220_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab288220 Zm00028ab288220_P004 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab288220 Zm00028ab288220_P005 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab288280 Zm00028ab288280_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab288340 Zm00028ab288340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab288340 Zm00028ab288340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab288340 Zm00028ab288340_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab288720 Zm00028ab288720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab288720 Zm00028ab288720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab288720 Zm00028ab288720_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab288770 Zm00028ab288770_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab288770 Zm00028ab288770_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab288770 Zm00028ab288770_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab288960 Zm00028ab288960_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P005 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00028ab289120 Zm00028ab289120_P006 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab289200 Zm00028ab289200_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab289200 Zm00028ab289200_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab289200 Zm00028ab289200_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab289200 Zm00028ab289200_P004 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab289270 Zm00028ab289270_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab289270 Zm00028ab289270_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab289270 Zm00028ab289270_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab289270 Zm00028ab289270_P004 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P002 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab289510 Zm00028ab289510_P003 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab289580 Zm00028ab289580_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab289580 Zm00028ab289580_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab289580 Zm00028ab289580_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab289650 Zm00028ab289650_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab289650 Zm00028ab289650_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P003 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P004 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab289680 Zm00028ab289680_P004 NA PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00028ab289760 Zm00028ab289760_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab289930 Zm00028ab289930_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289930 Zm00028ab289930_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289930 Zm00028ab289930_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab289940 Zm00028ab289940_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab290030 Zm00028ab290030_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab290030 Zm00028ab290030_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab290030 Zm00028ab290030_P003 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab290050 Zm00028ab290050_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab290450 Zm00028ab290450_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab290450 Zm00028ab290450_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab290450 Zm00028ab290450_P001 conditional PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00028ab290540 Zm00028ab290540_P001 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00028ab290540 Zm00028ab290540_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab290650 Zm00028ab290650_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab290650 Zm00028ab290650_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00028ab290650 Zm00028ab290650_P003 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab290700 Zm00028ab290700_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab290700 Zm00028ab290700_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab290780 Zm00028ab290780_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab290780 Zm00028ab290780_P002 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab290810 Zm00028ab290810_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab290820 Zm00028ab290820_P002 ubiquitous PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab290840 Zm00028ab290840_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab291040 Zm00028ab291040_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab291060 Zm00028ab291060_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab291060 Zm00028ab291060_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab291080 Zm00028ab291080_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab291080 Zm00028ab291080_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab291080 Zm00028ab291080_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab291080 Zm00028ab291080_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab291150 Zm00028ab291150_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab291180 Zm00028ab291180_P002 manual PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab291440 Zm00028ab291440_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab291440 Zm00028ab291440_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab291440 Zm00028ab291440_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab291780 Zm00028ab291780_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab291830 Zm00028ab291830_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab291830 Zm00028ab291830_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab291860 Zm00028ab291860_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab291870 Zm00028ab291870_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab291880 Zm00028ab291880_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab291900 Zm00028ab291900_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab291960 Zm00028ab291960_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab291960 Zm00028ab291960_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab291960 Zm00028ab291960_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab291960 Zm00028ab291960_P002 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab291970 Zm00028ab291970_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab291970 Zm00028ab291970_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab291970 Zm00028ab291970_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab292030 Zm00028ab292030_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab292030 Zm00028ab292030_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab292030 Zm00028ab292030_P003 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab292040 Zm00028ab292040_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab292040 Zm00028ab292040_P002 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab292040 Zm00028ab292040_P003 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab292040 Zm00028ab292040_P004 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab292050 Zm00028ab292050_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab292100 Zm00028ab292100_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab292100 Zm00028ab292100_P002 expected PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00028ab292350 Zm00028ab292350_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00028ab292390 Zm00028ab292390_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00028ab292390 Zm00028ab292390_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab292440 Zm00028ab292440_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab292440 Zm00028ab292440_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab292440 Zm00028ab292440_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab292450 Zm00028ab292450_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab292480 Zm00028ab292480_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab292590 Zm00028ab292590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00028ab292590 Zm00028ab292590_P002 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab292670 Zm00028ab292670_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab292750 Zm00028ab292750_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab292750 Zm00028ab292750_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab292770 Zm00028ab292770_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab292930 Zm00028ab292930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab292930 Zm00028ab292930_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab293040 Zm00028ab293040_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00028ab293090 Zm00028ab293090_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P002 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P003 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P004 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P004 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P005 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P005 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab293220 Zm00028ab293220_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab293240 Zm00028ab293240_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab293240 Zm00028ab293240_P002 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab293370 Zm00028ab293370_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab293370 Zm00028ab293370_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab293420 Zm00028ab293420_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab293470 Zm00028ab293470_P005 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab293550 Zm00028ab293550_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P003 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P004 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab293590 Zm00028ab293590_P005 manual MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab293820 Zm00028ab293820_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab293820 Zm00028ab293820_P002 viridiplantae PWY-5068 chlorophyll cycle RXN1F-66 EC-2.5.1.62 Zm00028ab293830 Zm00028ab293830_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN1F-66 EC-2.5.1.62 Zm00028ab293830 Zm00028ab293830_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-7663 EC-2.5.1.62 Zm00028ab293830 Zm00028ab293830_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab294560 Zm00028ab294560_P001 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab295030 Zm00028ab295030_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab295070 Zm00028ab295070_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab295070 Zm00028ab295070_P001 conditional HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab295260 Zm00028ab295260_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab295260 Zm00028ab295260_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00028ab295260 Zm00028ab295260_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295490 Zm00028ab295490_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P004 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P005 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P006 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P006 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P007 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P007 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P007 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P008 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P008 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P008 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P009 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P009 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab295500 Zm00028ab295500_P009 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab295530 Zm00028ab295530_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab295530 Zm00028ab295530_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab295530 Zm00028ab295530_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab295570 Zm00028ab295570_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab295570 Zm00028ab295570_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab295590 Zm00028ab295590_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab295590 Zm00028ab295590_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab295640 Zm00028ab295640_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab295650 Zm00028ab295650_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab295650 Zm00028ab295650_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab295650 Zm00028ab295650_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab295660 Zm00028ab295660_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab295660 Zm00028ab295660_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab295660 Zm00028ab295660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab295840 Zm00028ab295840_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab295840 Zm00028ab295840_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab295840 Zm00028ab295840_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P005 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P005 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P005 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P005 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab295850 Zm00028ab295850_P005 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab295890 Zm00028ab295890_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab295990 Zm00028ab295990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab295990 Zm00028ab295990_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab295990 Zm00028ab295990_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab296750 Zm00028ab296750_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab296750 Zm00028ab296750_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab296750 Zm00028ab296750_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab296980 Zm00028ab296980_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab296980 Zm00028ab296980_P003 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab297040 Zm00028ab297040_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab297040 Zm00028ab297040_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab297110 Zm00028ab297110_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00028ab297190 Zm00028ab297190_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab297290 Zm00028ab297290_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab297320 Zm00028ab297320_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab297320 Zm00028ab297320_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab297320 Zm00028ab297320_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab297320 Zm00028ab297320_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab297320 Zm00028ab297320_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab297320 Zm00028ab297320_P002 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab297360 Zm00028ab297360_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab297360 Zm00028ab297360_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab297390 Zm00028ab297390_P002 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab297420 Zm00028ab297420_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab297420 Zm00028ab297420_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab297420 Zm00028ab297420_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab297430 Zm00028ab297430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab297430 Zm00028ab297430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab297430 Zm00028ab297430_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab297430 Zm00028ab297430_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab297700 Zm00028ab297700_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab297700 Zm00028ab297700_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab297700 Zm00028ab297700_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab297820 Zm00028ab297820_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab297820 Zm00028ab297820_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab297820 Zm00028ab297820_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00028ab297820 Zm00028ab297820_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab298100 Zm00028ab298100_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab298100 Zm00028ab298100_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab298320 Zm00028ab298320_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab298370 Zm00028ab298370_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab298370 Zm00028ab298370_P002 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00028ab298430 Zm00028ab298430_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00028ab298450 Zm00028ab298450_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab298750 Zm00028ab298750_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab298750 Zm00028ab298750_P002 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab298750 Zm00028ab298750_P003 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab298750 Zm00028ab298750_P004 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00028ab298750 Zm00028ab298750_P005 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab299080 Zm00028ab299080_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab299080 Zm00028ab299080_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab299080 Zm00028ab299080_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab299210 Zm00028ab299210_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab299210 Zm00028ab299210_P005 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab299210 Zm00028ab299210_P006 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab299210 Zm00028ab299210_P007 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab299220 Zm00028ab299220_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab299220 Zm00028ab299220_P002 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00028ab299260 Zm00028ab299260_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00028ab299260 Zm00028ab299260_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P003 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab299570 Zm00028ab299570_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299750 Zm00028ab299750_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab299760 Zm00028ab299760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299760 Zm00028ab299760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab299760 Zm00028ab299760_P001 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00028ab299780 Zm00028ab299780_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab299780 Zm00028ab299780_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab299780 Zm00028ab299780_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00028ab299780 Zm00028ab299780_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00028ab299780 Zm00028ab299780_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00028ab299780 Zm00028ab299780_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab299800 Zm00028ab299800_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab299800 Zm00028ab299800_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00028ab299930 Zm00028ab299930_P002 NA SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00028ab299970 Zm00028ab299970_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00028ab299970 Zm00028ab299970_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab300000 Zm00028ab300000_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab300160 Zm00028ab300160_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab300160 Zm00028ab300160_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab300160 Zm00028ab300160_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab300410 Zm00028ab300410_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00028ab300410 Zm00028ab300410_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab300420 Zm00028ab300420_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab300420 Zm00028ab300420_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab300480 Zm00028ab300480_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab300680 Zm00028ab300680_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab300680 Zm00028ab300680_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab300890 Zm00028ab300890_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab300950 Zm00028ab300950_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab301010 Zm00028ab301010_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab301010 Zm00028ab301010_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab301020 Zm00028ab301020_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab301020 Zm00028ab301020_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab301020 Zm00028ab301020_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab301020 Zm00028ab301020_P004 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab301170 Zm00028ab301170_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab301380 Zm00028ab301380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab301380 Zm00028ab301380_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab301400 Zm00028ab301400_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab301400 Zm00028ab301400_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab301400 Zm00028ab301400_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab301490 Zm00028ab301490_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab301610 Zm00028ab301610_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab301780 Zm00028ab301780_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab301780 Zm00028ab301780_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab301790 Zm00028ab301790_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P002 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P002 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P003 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab301830 Zm00028ab301830_P003 excluded PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab301860 Zm00028ab301860_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P001 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P002 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P003 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab301930 Zm00028ab301930_P005 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab301960 Zm00028ab301960_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab302120 Zm00028ab302120_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab302220 Zm00028ab302220_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab302220 Zm00028ab302220_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab302220 Zm00028ab302220_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab302310 Zm00028ab302310_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab302320 Zm00028ab302320_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab302520 Zm00028ab302520_P003 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab302590 Zm00028ab302590_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab302600 Zm00028ab302600_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab302610 Zm00028ab302610_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab302610 Zm00028ab302610_P002 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab302770 Zm00028ab302770_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00028ab302770 Zm00028ab302770_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P004 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P005 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab302920 Zm00028ab302920_P005 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab302960 Zm00028ab302960_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab302960 Zm00028ab302960_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab303010 Zm00028ab303010_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab303010 Zm00028ab303010_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab303010 Zm00028ab303010_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00028ab303190 Zm00028ab303190_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab303280 Zm00028ab303280_P001 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab303400 Zm00028ab303400_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab303520 Zm00028ab303520_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab303940 Zm00028ab303940_P002 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab304070 Zm00028ab304070_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab304170 Zm00028ab304170_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab304170 Zm00028ab304170_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab304170 Zm00028ab304170_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab304180 Zm00028ab304180_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab304180 Zm00028ab304180_P002 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab304180 Zm00028ab304180_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab304200 Zm00028ab304200_P004 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab304300 Zm00028ab304300_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab304300 Zm00028ab304300_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab304310 Zm00028ab304310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab304310 Zm00028ab304310_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab304320 Zm00028ab304320_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab304350 Zm00028ab304350_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab304350 Zm00028ab304350_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab304350 Zm00028ab304350_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab304370 Zm00028ab304370_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab304550 Zm00028ab304550_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab304550 Zm00028ab304550_P002 expected PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab304770 Zm00028ab304770_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab304770 Zm00028ab304770_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab304770 Zm00028ab304770_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab304770 Zm00028ab304770_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab304770 Zm00028ab304770_P005 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab304860 Zm00028ab304860_P001 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00028ab304860 Zm00028ab304860_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab304860 Zm00028ab304860_P001 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00028ab304860 Zm00028ab304860_P001 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00028ab304860 Zm00028ab304860_P001 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab304860 Zm00028ab304860_P002 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00028ab304860 Zm00028ab304860_P002 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab304860 Zm00028ab304860_P002 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00028ab304860 Zm00028ab304860_P002 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00028ab304860 Zm00028ab304860_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab305180 Zm00028ab305180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab305180 Zm00028ab305180_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab305180 Zm00028ab305180_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab305340 Zm00028ab305340_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab305370 Zm00028ab305370_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab305370 Zm00028ab305370_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab305370 Zm00028ab305370_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab305370 Zm00028ab305370_P002 viridiplantae PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab305520 Zm00028ab305520_P002 ubiquitous PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab305530 Zm00028ab305530_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab305530 Zm00028ab305530_P002 excluded PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab305580 Zm00028ab305580_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab305590 Zm00028ab305590_P001 expected PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00028ab305620 Zm00028ab305620_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab305700 Zm00028ab305700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab305700 Zm00028ab305700_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab305860 Zm00028ab305860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305860 Zm00028ab305860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305860 Zm00028ab305860_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab305870 Zm00028ab305870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305870 Zm00028ab305870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305870 Zm00028ab305870_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab305890 Zm00028ab305890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305890 Zm00028ab305890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305890 Zm00028ab305890_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab305900 Zm00028ab305900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305900 Zm00028ab305900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab305900 Zm00028ab305900_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab305930 Zm00028ab305930_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab306060 Zm00028ab306060_P001 conditional PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab306140 Zm00028ab306140_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00028ab306140 Zm00028ab306140_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab306170 Zm00028ab306170_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00028ab306280 Zm00028ab306280_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab306290 Zm00028ab306290_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab307140 Zm00028ab307140_P002 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab307190 Zm00028ab307190_P001 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab307450 Zm00028ab307450_P001 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab307500 Zm00028ab307500_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab307500 Zm00028ab307500_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab307610 Zm00028ab307610_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab307700 Zm00028ab307700_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab307700 Zm00028ab307700_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab307700 Zm00028ab307700_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab307720 Zm00028ab307720_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00028ab307720 Zm00028ab307720_P002 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab307800 Zm00028ab307800_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab307980 Zm00028ab307980_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00028ab308150 Zm00028ab308150_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab308180 Zm00028ab308180_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab308180 Zm00028ab308180_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab308180 Zm00028ab308180_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab308200 Zm00028ab308200_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab308200 Zm00028ab308200_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab308200 Zm00028ab308200_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab308210 Zm00028ab308210_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab308210 Zm00028ab308210_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab308210 Zm00028ab308210_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab308220 Zm00028ab308220_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab308220 Zm00028ab308220_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab308220 Zm00028ab308220_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab308250 Zm00028ab308250_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab308250 Zm00028ab308250_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab308250 Zm00028ab308250_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab308270 Zm00028ab308270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab308270 Zm00028ab308270_P002 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab308330 Zm00028ab308330_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab308900 Zm00028ab308900_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab308900 Zm00028ab308900_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00028ab308900 Zm00028ab308900_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00028ab309030 Zm00028ab309030_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00028ab309030 Zm00028ab309030_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab309100 Zm00028ab309100_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab309100 Zm00028ab309100_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab309100 Zm00028ab309100_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab309100 Zm00028ab309100_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab309180 Zm00028ab309180_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00028ab309180 Zm00028ab309180_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab309580 Zm00028ab309580_P001 ubiquitous PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00028ab309630 Zm00028ab309630_P001 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00028ab309630 Zm00028ab309630_P002 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00028ab309630 Zm00028ab309630_P003 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00028ab309630 Zm00028ab309630_P004 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab309750 Zm00028ab309750_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab309750 Zm00028ab309750_P002 expected VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00028ab309760 Zm00028ab309760_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab309820 Zm00028ab309820_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab309820 Zm00028ab309820_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab309820 Zm00028ab309820_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab309820 Zm00028ab309820_P001 expected GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00028ab310090 Zm00028ab310090_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab310110 Zm00028ab310110_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab310110 Zm00028ab310110_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab310110 Zm00028ab310110_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab310200 Zm00028ab310200_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00028ab310290 Zm00028ab310290_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab310360 Zm00028ab310360_P005 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab310520 Zm00028ab310520_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab310520 Zm00028ab310520_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab310520 Zm00028ab310520_P003 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab310600 Zm00028ab310600_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P005 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab310720 Zm00028ab310720_P006 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab310730 Zm00028ab310730_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab310780 Zm00028ab310780_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab310970 Zm00028ab310970_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab310970 Zm00028ab310970_P002 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab311180 Zm00028ab311180_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab311200 Zm00028ab311200_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab311200 Zm00028ab311200_P002 expected PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab311310 Zm00028ab311310_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00028ab311310 Zm00028ab311310_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab311450 Zm00028ab311450_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311540 Zm00028ab311540_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311540 Zm00028ab311540_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311550 Zm00028ab311550_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311550 Zm00028ab311550_P003 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311560 Zm00028ab311560_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311600 Zm00028ab311600_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311610 Zm00028ab311610_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311610 Zm00028ab311610_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311650 Zm00028ab311650_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab311650 Zm00028ab311650_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab311660 Zm00028ab311660_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311760 Zm00028ab311760_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311760 Zm00028ab311760_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311760 Zm00028ab311760_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311770 Zm00028ab311770_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311770 Zm00028ab311770_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311770 Zm00028ab311770_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311770 Zm00028ab311770_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00028ab311770 Zm00028ab311770_P005 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab312120 Zm00028ab312120_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab312120 Zm00028ab312120_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P002 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00028ab312460 Zm00028ab312460_P002 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab312560 Zm00028ab312560_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab312560 Zm00028ab312560_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab312640 Zm00028ab312640_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab312640 Zm00028ab312640_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab312640 Zm00028ab312640_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab312650 Zm00028ab312650_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab312770 Zm00028ab312770_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab312780 Zm00028ab312780_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab312860 Zm00028ab312860_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab312940 Zm00028ab312940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab312940 Zm00028ab312940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab312940 Zm00028ab312940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab313100 Zm00028ab313100_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab313180 Zm00028ab313180_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab313180 Zm00028ab313180_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab313180 Zm00028ab313180_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab313200 Zm00028ab313200_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab313200 Zm00028ab313200_P002 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00028ab313200 Zm00028ab313200_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab313310 Zm00028ab313310_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab313310 Zm00028ab313310_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab313310 Zm00028ab313310_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab313310 Zm00028ab313310_P004 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab313360 Zm00028ab313360_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab313360 Zm00028ab313360_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab313360 Zm00028ab313360_P003 viridiplantae PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 2.7.1.127-RXN EC-2.7.1.127 Zm00028ab313400 Zm00028ab313400_P001 excluded PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P005 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00028ab313510 Zm00028ab313510_P006 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab313580 Zm00028ab313580_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab313580 Zm00028ab313580_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab313690 Zm00028ab313690_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab313730 Zm00028ab313730_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab313750 Zm00028ab313750_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab313750 Zm00028ab313750_P001 ubiquitous PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab313770 Zm00028ab313770_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab313770 Zm00028ab313770_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab313770 Zm00028ab313770_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab313770 Zm00028ab313770_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab313770 Zm00028ab313770_P001 NA PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00028ab313800 Zm00028ab313800_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab313950 Zm00028ab313950_P001 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P005 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab314000 Zm00028ab314000_P006 expected PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab314140 Zm00028ab314140_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab314140 Zm00028ab314140_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab314140 Zm00028ab314140_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab314240 Zm00028ab314240_P001 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab314360 Zm00028ab314360_P001 ubiquitous PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab314380 Zm00028ab314380_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab314380 Zm00028ab314380_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab314380 Zm00028ab314380_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab314380 Zm00028ab314380_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab314550 Zm00028ab314550_P001 viridiplantae PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00028ab314640 Zm00028ab314640_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P005 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00028ab314690 Zm00028ab314690_P006 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab314850 Zm00028ab314850_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab314850 Zm00028ab314850_P002 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab314900 Zm00028ab314900_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab314900 Zm00028ab314900_P001 excluded PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P002 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P003 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P004 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P005 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P006 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P007 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00028ab315090 Zm00028ab315090_P008 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab315410 Zm00028ab315410_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab315530 Zm00028ab315530_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab315580 Zm00028ab315580_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P005 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P006 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P006 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P007 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab315590 Zm00028ab315590_P007 conditional PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00028ab315610 Zm00028ab315610_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00028ab315610 Zm00028ab315610_P001 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P004 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P005 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab316230 Zm00028ab316230_P005 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab316540 Zm00028ab316540_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab316540 Zm00028ab316540_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab316540 Zm00028ab316540_P003 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00028ab316660 Zm00028ab316660_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00028ab316660 Zm00028ab316660_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00028ab316660 Zm00028ab316660_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00028ab316660 Zm00028ab316660_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab316760 Zm00028ab316760_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab316760 Zm00028ab316760_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P002 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P003 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P004 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab316990 Zm00028ab316990_P005 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00028ab316990 Zm00028ab316990_P005 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab317070 Zm00028ab317070_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab317070 Zm00028ab317070_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab317070 Zm00028ab317070_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab317070 Zm00028ab317070_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab317070 Zm00028ab317070_P004 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab317080 Zm00028ab317080_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab317170 Zm00028ab317170_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab317170 Zm00028ab317170_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab317170 Zm00028ab317170_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab317170 Zm00028ab317170_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab317210 Zm00028ab317210_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab317230 Zm00028ab317230_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab317460 Zm00028ab317460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab317460 Zm00028ab317460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab317460 Zm00028ab317460_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab317540 Zm00028ab317540_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab317540 Zm00028ab317540_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab317540 Zm00028ab317540_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab317560 Zm00028ab317560_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab317560 Zm00028ab317560_P002 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab317730 Zm00028ab317730_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab317730 Zm00028ab317730_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab317730 Zm00028ab317730_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab317730 Zm00028ab317730_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab317770 Zm00028ab317770_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab317770 Zm00028ab317770_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab317770 Zm00028ab317770_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab317770 Zm00028ab317770_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab317770 Zm00028ab317770_P005 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab317810 Zm00028ab317810_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab317810 Zm00028ab317810_P002 ubiquitous PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P002 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P003 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P004 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00028ab317870 Zm00028ab317870_P004 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab317890 Zm00028ab317890_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab317890 Zm00028ab317890_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab317890 Zm00028ab317890_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab317890 Zm00028ab317890_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab318000 Zm00028ab318000_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab318000 Zm00028ab318000_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab318000 Zm00028ab318000_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab318000 Zm00028ab318000_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab318000 Zm00028ab318000_P005 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab318040 Zm00028ab318040_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab318280 Zm00028ab318280_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab318280 Zm00028ab318280_P001 expected PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab318280 Zm00028ab318280_P002 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00028ab318280 Zm00028ab318280_P002 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00028ab318350 Zm00028ab318350_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00028ab318350 Zm00028ab318350_P002 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab318450 Zm00028ab318450_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab318450 Zm00028ab318450_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00028ab318450 Zm00028ab318450_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab318770 Zm00028ab318770_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab318770 Zm00028ab318770_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab318770 Zm00028ab318770_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P001 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P002 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P002 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P003 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P004 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00028ab318850 Zm00028ab318850_P004 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00028ab319120 Zm00028ab319120_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab319180 Zm00028ab319180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab319180 Zm00028ab319180_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab319280 Zm00028ab319280_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab319280 Zm00028ab319280_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab319280 Zm00028ab319280_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab319280 Zm00028ab319280_P004 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab319560 Zm00028ab319560_P002 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab319830 Zm00028ab319830_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab319830 Zm00028ab319830_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00028ab319830 Zm00028ab319830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab319860 Zm00028ab319860_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab319860 Zm00028ab319860_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab319870 Zm00028ab319870_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab319870 Zm00028ab319870_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab319870 Zm00028ab319870_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab320020 Zm00028ab320020_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab320060 Zm00028ab320060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00028ab320060 Zm00028ab320060_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00028ab320060 Zm00028ab320060_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab320150 Zm00028ab320150_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab320230 Zm00028ab320230_P001 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab320240 Zm00028ab320240_P006 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab320240 Zm00028ab320240_P006 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab320290 Zm00028ab320290_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab320300 Zm00028ab320300_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab320330 Zm00028ab320330_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab320330 Zm00028ab320330_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab320450 Zm00028ab320450_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00028ab320450 Zm00028ab320450_P002 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab320550 Zm00028ab320550_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab320550 Zm00028ab320550_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab320640 Zm00028ab320640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab320760 Zm00028ab320760_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab321590 Zm00028ab321590_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab321590 Zm00028ab321590_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab321590 Zm00028ab321590_P003 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00028ab321650 Zm00028ab321650_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00028ab321650 Zm00028ab321650_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321720 Zm00028ab321720_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321720 Zm00028ab321720_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321720 Zm00028ab321720_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321720 Zm00028ab321720_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321740 Zm00028ab321740_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321740 Zm00028ab321740_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321760 Zm00028ab321760_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab321760 Zm00028ab321760_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab321780 Zm00028ab321780_P004 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab321920 Zm00028ab321920_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab321920 Zm00028ab321920_P002 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab322210 Zm00028ab322210_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab322210 Zm00028ab322210_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab322210 Zm00028ab322210_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab322210 Zm00028ab322210_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab322290 Zm00028ab322290_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab322290 Zm00028ab322290_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab322290 Zm00028ab322290_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab322290 Zm00028ab322290_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab322290 Zm00028ab322290_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab322290 Zm00028ab322290_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P002 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P003 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P004 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P004 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P005 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P005 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P006 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P006 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P007 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab322390 Zm00028ab322390_P007 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab322670 Zm00028ab322670_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab322720 Zm00028ab322720_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab322720 Zm00028ab322720_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab322720 Zm00028ab322720_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab322720 Zm00028ab322720_P002 conditional PWY-3841 folate transformations II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00028ab322870 Zm00028ab322870_P001 viridiplantae PWY-2161 folate polyglutamylation FORMATETHFLIG-RXN EC-6.3.4.3 Zm00028ab322870 Zm00028ab322870_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00028ab322870 Zm00028ab322870_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate FORMATETHFLIG-RXN EC-6.3.4.3 Zm00028ab322870 Zm00028ab322870_P001 excluded ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab323010 Zm00028ab323010_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab323110 Zm00028ab323110_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab323110 Zm00028ab323110_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323190 Zm00028ab323190_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323190 Zm00028ab323190_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323190 Zm00028ab323190_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323400 Zm00028ab323400_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323400 Zm00028ab323400_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323400 Zm00028ab323400_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323440 Zm00028ab323440_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323440 Zm00028ab323440_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323440 Zm00028ab323440_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323450 Zm00028ab323450_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323450 Zm00028ab323450_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323450 Zm00028ab323450_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323490 Zm00028ab323490_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab323500 Zm00028ab323500_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P005 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P006 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P006 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab323660 Zm00028ab323660_P006 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P002 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P003 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab323710 Zm00028ab323710_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab323780 Zm00028ab323780_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab323780 Zm00028ab323780_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab323780 Zm00028ab323780_P001 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab323900 Zm00028ab323900_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab323950 Zm00028ab323950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab323950 Zm00028ab323950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab323950 Zm00028ab323950_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab323970 Zm00028ab323970_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab323980 Zm00028ab323980_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab323980 Zm00028ab323980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab324040 Zm00028ab324040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab324040 Zm00028ab324040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab324040 Zm00028ab324040_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab324060 Zm00028ab324060_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab324060 Zm00028ab324060_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab324060 Zm00028ab324060_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab324060 Zm00028ab324060_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab324060 Zm00028ab324060_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab324190 Zm00028ab324190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab324190 Zm00028ab324190_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab324260 Zm00028ab324260_P003 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab324450 Zm00028ab324450_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab324450 Zm00028ab324450_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab324530 Zm00028ab324530_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab324530 Zm00028ab324530_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab324530 Zm00028ab324530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab324570 Zm00028ab324570_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab324570 Zm00028ab324570_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00028ab324830 Zm00028ab324830_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00028ab324830 Zm00028ab324830_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325230 Zm00028ab325230_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325230 Zm00028ab325230_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325230 Zm00028ab325230_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325230 Zm00028ab325230_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325230 Zm00028ab325230_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325240 Zm00028ab325240_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325260 Zm00028ab325260_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325260 Zm00028ab325260_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325270 Zm00028ab325270_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab325290 Zm00028ab325290_P006 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00028ab325300 Zm00028ab325300_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab325360 Zm00028ab325360_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab325430 Zm00028ab325430_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00028ab325820 Zm00028ab325820_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00028ab325820 Zm00028ab325820_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab325950 Zm00028ab325950_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab326110 Zm00028ab326110_P005 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab326140 Zm00028ab326140_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab326140 Zm00028ab326140_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab326140 Zm00028ab326140_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab326260 Zm00028ab326260_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab326260 Zm00028ab326260_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab326370 Zm00028ab326370_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab326370 Zm00028ab326370_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab326370 Zm00028ab326370_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab326370 Zm00028ab326370_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab326370 Zm00028ab326370_P001 excluded PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab326390 Zm00028ab326390_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab326420 Zm00028ab326420_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab326420 Zm00028ab326420_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab326420 Zm00028ab326420_P006 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab326580 Zm00028ab326580_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab326580 Zm00028ab326580_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab326580 Zm00028ab326580_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab326670 Zm00028ab326670_P005 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab326680 Zm00028ab326680_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab326680 Zm00028ab326680_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab326680 Zm00028ab326680_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab326680 Zm00028ab326680_P004 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab326680 Zm00028ab326680_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab326800 Zm00028ab326800_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab326940 Zm00028ab326940_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab326940 Zm00028ab326940_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab326970 Zm00028ab326970_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab326970 Zm00028ab326970_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab326970 Zm00028ab326970_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab326970 Zm00028ab326970_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab326970 Zm00028ab326970_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab326970 Zm00028ab326970_P002 NA PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab327170 Zm00028ab327170_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab327170 Zm00028ab327170_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab327170 Zm00028ab327170_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00028ab327170 Zm00028ab327170_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab327280 Zm00028ab327280_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab327280 Zm00028ab327280_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab327280 Zm00028ab327280_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab327290 Zm00028ab327290_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab327520 Zm00028ab327520_P001 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00028ab327640 Zm00028ab327640_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab327990 Zm00028ab327990_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab327990 Zm00028ab327990_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab327990 Zm00028ab327990_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab327990 Zm00028ab327990_P004 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab328080 Zm00028ab328080_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab328080 Zm00028ab328080_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab328080 Zm00028ab328080_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab328080 Zm00028ab328080_P004 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab328080 Zm00028ab328080_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab328190 Zm00028ab328190_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab328290 Zm00028ab328290_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab328290 Zm00028ab328290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab328400 Zm00028ab328400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00028ab328400 Zm00028ab328400_P001 conditional PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P001 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P001 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P001 NA PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P002 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P002 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P002 NA PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P003 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00028ab328410 Zm00028ab328410_P003 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00028ab328410 Zm00028ab328410_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab328480 Zm00028ab328480_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab328480 Zm00028ab328480_P002 NA PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00028ab328570 Zm00028ab328570_P001 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00028ab328570 Zm00028ab328570_P002 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab328660 Zm00028ab328660_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab328690 Zm00028ab328690_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab328690 Zm00028ab328690_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab328690 Zm00028ab328690_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab329060 Zm00028ab329060_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab329090 Zm00028ab329090_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab329180 Zm00028ab329180_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00028ab329180 Zm00028ab329180_P001 excluded PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab329620 Zm00028ab329620_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab329620 Zm00028ab329620_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab329690 Zm00028ab329690_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab329690 Zm00028ab329690_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab329690 Zm00028ab329690_P001 conditional GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab329820 Zm00028ab329820_P001 NA PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab330030 Zm00028ab330030_P001 viridiplantae PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00028ab330060 Zm00028ab330060_P001 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00028ab330060 Zm00028ab330060_P001 expected PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00028ab330060 Zm00028ab330060_P002 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00028ab330060 Zm00028ab330060_P002 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab330090 Zm00028ab330090_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab330090 Zm00028ab330090_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab330430 Zm00028ab330430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab330430 Zm00028ab330430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab330430 Zm00028ab330430_P001 conditional GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P001 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P002 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P003 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P004 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00028ab330600 Zm00028ab330600_P005 NA PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00028ab330690 Zm00028ab330690_P001 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00028ab330690 Zm00028ab330690_P001 viridiplantae PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00028ab330690 Zm00028ab330690_P002 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00028ab330690 Zm00028ab330690_P002 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab330880 Zm00028ab330880_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab330880 Zm00028ab330880_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab330880 Zm00028ab330880_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab330880 Zm00028ab330880_P001 NA SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P001 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P002 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P002 expected SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P003 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00028ab331110 Zm00028ab331110_P003 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab331240 Zm00028ab331240_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331240 Zm00028ab331240_P001 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab331240 Zm00028ab331240_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331240 Zm00028ab331240_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab331240 Zm00028ab331240_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331240 Zm00028ab331240_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab331240 Zm00028ab331240_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331240 Zm00028ab331240_P004 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab331240 Zm00028ab331240_P005 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331240 Zm00028ab331240_P005 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab331280 Zm00028ab331280_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab331280 Zm00028ab331280_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab331290 Zm00028ab331290_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab331290 Zm00028ab331290_P001 expected ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P001 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00028ab331370 Zm00028ab331370_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab331520 Zm00028ab331520_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab331570 Zm00028ab331570_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab331570 Zm00028ab331570_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00028ab331740 Zm00028ab331740_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00028ab331740 Zm00028ab331740_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00028ab331740 Zm00028ab331740_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00028ab331740 Zm00028ab331740_P004 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P004 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P005 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P005 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P005 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab331840 Zm00028ab331840_P005 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab332090 Zm00028ab332090_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab332090 Zm00028ab332090_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab332170 Zm00028ab332170_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab332370 Zm00028ab332370_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab332370 Zm00028ab332370_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab332370 Zm00028ab332370_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab332390 Zm00028ab332390_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab332420 Zm00028ab332420_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab332890 Zm00028ab332890_P003 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab333150 Zm00028ab333150_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab333150 Zm00028ab333150_P002 expected DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab333180 Zm00028ab333180_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab333180 Zm00028ab333180_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab333180 Zm00028ab333180_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab333180 Zm00028ab333180_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab333660 Zm00028ab333660_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab333660 Zm00028ab333660_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab333660 Zm00028ab333660_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab333660 Zm00028ab333660_P004 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab333760 Zm00028ab333760_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab333760 Zm00028ab333760_P001 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab333820 Zm00028ab333820_P001 expected PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab333950 Zm00028ab333950_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab333950 Zm00028ab333950_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab333950 Zm00028ab333950_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab333950 Zm00028ab333950_P002 NA PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab334070 Zm00028ab334070_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab334070 Zm00028ab334070_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab334070 Zm00028ab334070_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00028ab334070 Zm00028ab334070_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab334070 Zm00028ab334070_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab334070 Zm00028ab334070_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab334070 Zm00028ab334070_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab334070 Zm00028ab334070_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P005 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab334390 Zm00028ab334390_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab334500 Zm00028ab334500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab334500 Zm00028ab334500_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab334500 Zm00028ab334500_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab334660 Zm00028ab334660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab334660 Zm00028ab334660_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab334660 Zm00028ab334660_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab334900 Zm00028ab334900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab334900 Zm00028ab334900_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab334910 Zm00028ab334910_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab334910 Zm00028ab334910_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab335220 Zm00028ab335220_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab335360 Zm00028ab335360_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab335360 Zm00028ab335360_P001 conditional PWY-641 proanthocyanidins biosynthesis from flavanols RXN-10693 EC-1.3.1.77 Zm00028ab335360 Zm00028ab335360_P004 conditional PWY-6035 2,3-cis-flavanols biosynthesis RXN-9725 EC-1.3.1.77 Zm00028ab335360 Zm00028ab335360_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab335430 Zm00028ab335430_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab335500 Zm00028ab335500_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab335500 Zm00028ab335500_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab335500 Zm00028ab335500_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab335500 Zm00028ab335500_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00028ab335500 Zm00028ab335500_P005 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab335670 Zm00028ab335670_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00028ab335670 Zm00028ab335670_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab335730 Zm00028ab335730_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab335730 Zm00028ab335730_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab335730 Zm00028ab335730_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab335930 Zm00028ab335930_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab335930 Zm00028ab335930_P002 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab335940 Zm00028ab335940_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab335940 Zm00028ab335940_P004 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab336100 Zm00028ab336100_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab336100 Zm00028ab336100_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab336100 Zm00028ab336100_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab336100 Zm00028ab336100_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab336150 Zm00028ab336150_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab336160 Zm00028ab336160_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab336160 Zm00028ab336160_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab336160 Zm00028ab336160_P003 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab336390 Zm00028ab336390_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab336390 Zm00028ab336390_P002 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab336480 Zm00028ab336480_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab336480 Zm00028ab336480_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab336490 Zm00028ab336490_P001 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab336650 Zm00028ab336650_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab336650 Zm00028ab336650_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00028ab336710 Zm00028ab336710_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336730 Zm00028ab336730_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336770 Zm00028ab336770_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336810 Zm00028ab336810_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336830 Zm00028ab336830_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336840 Zm00028ab336840_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab336840 Zm00028ab336840_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab336890 Zm00028ab336890_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab336950 Zm00028ab336950_P001 NA PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab337180 Zm00028ab337180_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab337180 Zm00028ab337180_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab337180 Zm00028ab337180_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab337180 Zm00028ab337180_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab337270 Zm00028ab337270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab337270 Zm00028ab337270_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab337270 Zm00028ab337270_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab337270 Zm00028ab337270_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab337270 Zm00028ab337270_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337430 Zm00028ab337430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337430 Zm00028ab337430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337430 Zm00028ab337430_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337450 Zm00028ab337450_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337470 Zm00028ab337470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337470 Zm00028ab337470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337470 Zm00028ab337470_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337480 Zm00028ab337480_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337480 Zm00028ab337480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337480 Zm00028ab337480_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337500 Zm00028ab337500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337500 Zm00028ab337500_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337500 Zm00028ab337500_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab337510 Zm00028ab337510_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337510 Zm00028ab337510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab337510 Zm00028ab337510_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337750 Zm00028ab337750_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337750 Zm00028ab337750_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337750 Zm00028ab337750_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337770 Zm00028ab337770_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337790 Zm00028ab337790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337790 Zm00028ab337790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337790 Zm00028ab337790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337830 Zm00028ab337830_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab337840 Zm00028ab337840_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab337840 Zm00028ab337840_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab337840 Zm00028ab337840_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab338010 Zm00028ab338010_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab338160 Zm00028ab338160_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab338210 Zm00028ab338210_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab338210 Zm00028ab338210_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab338210 Zm00028ab338210_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P004 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P005 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab338280 Zm00028ab338280_P006 viridiplantae PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P001 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P001 NA PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P002 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00028ab338340 Zm00028ab338340_P002 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab338370 Zm00028ab338370_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab338390 Zm00028ab338390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab338390 Zm00028ab338390_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00028ab338480 Zm00028ab338480_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab338530 Zm00028ab338530_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab338530 Zm00028ab338530_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab338540 Zm00028ab338540_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab338540 Zm00028ab338540_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab338610 Zm00028ab338610_P001 NA PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P001 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P002 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P002 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P003 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P003 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P004 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00028ab338650 Zm00028ab338650_P004 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab338680 Zm00028ab338680_P003 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab338710 Zm00028ab338710_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab338710 Zm00028ab338710_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab338710 Zm00028ab338710_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab338710 Zm00028ab338710_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab338800 Zm00028ab338800_P005 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P004 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P005 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P006 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab338830 Zm00028ab338830_P007 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab338900 Zm00028ab338900_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab339070 Zm00028ab339070_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab339140 Zm00028ab339140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339140 Zm00028ab339140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339140 Zm00028ab339140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab339150 Zm00028ab339150_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339150 Zm00028ab339150_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339150 Zm00028ab339150_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab339160 Zm00028ab339160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339160 Zm00028ab339160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339160 Zm00028ab339160_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab339200 Zm00028ab339200_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339200 Zm00028ab339200_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab339200 Zm00028ab339200_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab339260 Zm00028ab339260_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab339260 Zm00028ab339260_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab339260 Zm00028ab339260_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab339260 Zm00028ab339260_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab339260 Zm00028ab339260_P005 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab339410 Zm00028ab339410_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab339410 Zm00028ab339410_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab339410 Zm00028ab339410_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab339410 Zm00028ab339410_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab339460 Zm00028ab339460_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab339460 Zm00028ab339460_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab339460 Zm00028ab339460_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab339460 Zm00028ab339460_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab339460 Zm00028ab339460_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab339500 Zm00028ab339500_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00028ab339750 Zm00028ab339750_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00028ab339760 Zm00028ab339760_P001 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P002 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P003 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P005 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P005 excluded PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P006 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P006 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00028ab339830 Zm00028ab339830_P006 excluded PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab339920 Zm00028ab339920_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab339950 Zm00028ab339950_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab339950 Zm00028ab339950_P001 ubiquitous PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab340120 Zm00028ab340120_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00028ab340120 Zm00028ab340120_P002 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab340170 Zm00028ab340170_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab340170 Zm00028ab340170_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00028ab340320 Zm00028ab340320_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00028ab340320 Zm00028ab340320_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab340350 Zm00028ab340350_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00028ab340350 Zm00028ab340350_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab340360 Zm00028ab340360_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab340360 Zm00028ab340360_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab340360 Zm00028ab340360_P001 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00028ab340590 Zm00028ab340590_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab340600 Zm00028ab340600_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab340790 Zm00028ab340790_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab340790 Zm00028ab340790_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab340790 Zm00028ab340790_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab340830 Zm00028ab340830_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab340830 Zm00028ab340830_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab340830 Zm00028ab340830_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab340830 Zm00028ab340830_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab340830 Zm00028ab340830_P001 ubiquitous PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab340900 Zm00028ab340900_P001 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab340900 Zm00028ab340900_P002 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab340910 Zm00028ab340910_P001 conditional PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00028ab340910 Zm00028ab340910_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab340940 Zm00028ab340940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab340940 Zm00028ab340940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab340940 Zm00028ab340940_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab340990 Zm00028ab340990_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00028ab341020 Zm00028ab341020_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTCYCLOHYD-RXN EC-3.5.4.19 Zm00028ab341340 Zm00028ab341340_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTPRATPHYD-RXN EC-3.6.1.31 Zm00028ab341340 Zm00028ab341340_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab341400 Zm00028ab341400_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab341450 Zm00028ab341450_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab341450 Zm00028ab341450_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab341450 Zm00028ab341450_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab341480 Zm00028ab341480_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab341480 Zm00028ab341480_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab341480 Zm00028ab341480_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab341480 Zm00028ab341480_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab341570 Zm00028ab341570_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab341570 Zm00028ab341570_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab341570 Zm00028ab341570_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab341570 Zm00028ab341570_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab341580 Zm00028ab341580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341580 Zm00028ab341580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341580 Zm00028ab341580_P001 conditional LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab341640 Zm00028ab341640_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab341640 Zm00028ab341640_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab341640 Zm00028ab341640_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00028ab341640 Zm00028ab341640_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab341860 Zm00028ab341860_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab341870 Zm00028ab341870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341870 Zm00028ab341870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341870 Zm00028ab341870_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab341880 Zm00028ab341880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341880 Zm00028ab341880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab341880 Zm00028ab341880_P001 conditional HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00028ab341920 Zm00028ab341920_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00028ab341920 Zm00028ab341920_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00028ab341920 Zm00028ab341920_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00028ab341920 Zm00028ab341920_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00028ab341920 Zm00028ab341920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab341960 Zm00028ab341960_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab341990 Zm00028ab341990_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab341990 Zm00028ab341990_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab341990 Zm00028ab341990_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00028ab341990 Zm00028ab341990_P004 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab342140 Zm00028ab342140_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab342160 Zm00028ab342160_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab342330 Zm00028ab342330_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab342330 Zm00028ab342330_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab342330 Zm00028ab342330_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab342330 Zm00028ab342330_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab342380 Zm00028ab342380_P003 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab342470 Zm00028ab342470_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab342520 Zm00028ab342520_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab342520 Zm00028ab342520_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab342520 Zm00028ab342520_P003 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab342550 Zm00028ab342550_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab342550 Zm00028ab342550_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab342550 Zm00028ab342550_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab342550 Zm00028ab342550_P002 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab342820 Zm00028ab342820_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab343030 Zm00028ab343030_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab343030 Zm00028ab343030_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab343030 Zm00028ab343030_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab343030 Zm00028ab343030_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00028ab343040 Zm00028ab343040_P003 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab343110 Zm00028ab343110_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab343120 Zm00028ab343120_P004 ubiquitous ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab343450 Zm00028ab343450_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab343500 Zm00028ab343500_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab343510 Zm00028ab343510_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab343510 Zm00028ab343510_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab343510 Zm00028ab343510_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab343510 Zm00028ab343510_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab343680 Zm00028ab343680_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab343680 Zm00028ab343680_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P002 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P003 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P003 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P003 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P003 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P004 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P004 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P004 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00028ab343850 Zm00028ab343850_P004 expected PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00028ab344180 Zm00028ab344180_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00028ab344180 Zm00028ab344180_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab344320 Zm00028ab344320_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab344320 Zm00028ab344320_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab344370 Zm00028ab344370_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab344430 Zm00028ab344430_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab344430 Zm00028ab344430_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab344580 Zm00028ab344580_P001 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab344720 Zm00028ab344720_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00028ab344750 Zm00028ab344750_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00028ab344750 Zm00028ab344750_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00028ab344750 Zm00028ab344750_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab344780 Zm00028ab344780_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab344780 Zm00028ab344780_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab344780 Zm00028ab344780_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab344810 Zm00028ab344810_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab344810 Zm00028ab344810_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab344810 Zm00028ab344810_P003 viridiplantae PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00028ab344820 Zm00028ab344820_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P001 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00028ab344820 Zm00028ab344820_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00028ab344820 Zm00028ab344820_P002 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P002 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00028ab344820 Zm00028ab344820_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab344860 Zm00028ab344860_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab344860 Zm00028ab344860_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab344860 Zm00028ab344860_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab344870 Zm00028ab344870_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab344870 Zm00028ab344870_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab344870 Zm00028ab344870_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab344910 Zm00028ab344910_P001 NA PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab345060 Zm00028ab345060_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab345060 Zm00028ab345060_P001 expected PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00028ab345200 Zm00028ab345200_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab345230 Zm00028ab345230_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab345230 Zm00028ab345230_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab345230 Zm00028ab345230_P001 NA PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab345270 Zm00028ab345270_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345360 Zm00028ab345360_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345360 Zm00028ab345360_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345360 Zm00028ab345360_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345360 Zm00028ab345360_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345360 Zm00028ab345360_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab345480 Zm00028ab345480_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab345590 Zm00028ab345590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab345590 Zm00028ab345590_P002 viridiplantae PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00028ab345610 Zm00028ab345610_P002 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab345670 Zm00028ab345670_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab345670 Zm00028ab345670_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab345670 Zm00028ab345670_P003 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P004 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P004 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P004 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P004 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab345670 Zm00028ab345670_P004 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P005 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P005 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P005 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P005 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00028ab345670 Zm00028ab345670_P005 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00028ab345670 Zm00028ab345670_P005 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab345840 Zm00028ab345840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab345840 Zm00028ab345840_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab345840 Zm00028ab345840_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab345840 Zm00028ab345840_P004 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab345920 Zm00028ab345920_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab345920 Zm00028ab345920_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab345920 Zm00028ab345920_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab346200 Zm00028ab346200_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab346280 Zm00028ab346280_P002 conditional PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00028ab346300 Zm00028ab346300_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00028ab346300 Zm00028ab346300_P002 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00028ab346300 Zm00028ab346300_P003 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00028ab346300 Zm00028ab346300_P003 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab346310 Zm00028ab346310_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab346430 Zm00028ab346430_P001 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab346830 Zm00028ab346830_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab346830 Zm00028ab346830_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab346830 Zm00028ab346830_P003 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab346890 Zm00028ab346890_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab346920 Zm00028ab346920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab346920 Zm00028ab346920_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab346920 Zm00028ab346920_P002 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00028ab346980 Zm00028ab346980_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00028ab346980 Zm00028ab346980_P002 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab347080 Zm00028ab347080_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00028ab347230 Zm00028ab347230_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347280 Zm00028ab347280_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347290 Zm00028ab347290_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347290 Zm00028ab347290_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347290 Zm00028ab347290_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347320 Zm00028ab347320_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347320 Zm00028ab347320_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347320 Zm00028ab347320_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347330 Zm00028ab347330_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347330 Zm00028ab347330_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347330 Zm00028ab347330_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab347340 Zm00028ab347340_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab347340 Zm00028ab347340_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab347340 Zm00028ab347340_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab347350 Zm00028ab347350_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab347350 Zm00028ab347350_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab347450 Zm00028ab347450_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab347450 Zm00028ab347450_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab347450 Zm00028ab347450_P003 NA PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00028ab347770 Zm00028ab347770_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00028ab347770 Zm00028ab347770_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXN-19838 EC-4.99.1.6 Zm00028ab347900 Zm00028ab347900_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00028ab347980 Zm00028ab347980_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00028ab347980 Zm00028ab347980_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab348020 Zm00028ab348020_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab348020 Zm00028ab348020_P002 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab348220 Zm00028ab348220_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab348220 Zm00028ab348220_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab348250 Zm00028ab348250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab348250 Zm00028ab348250_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab348250 Zm00028ab348250_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab348250 Zm00028ab348250_P004 viridiplantae PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00028ab348260 Zm00028ab348260_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab348550 Zm00028ab348550_P001 NA PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab348560 Zm00028ab348560_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab348560 Zm00028ab348560_P003 conditional PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab348630 Zm00028ab348630_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab348740 Zm00028ab348740_P006 ubiquitous PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab349090 Zm00028ab349090_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00028ab349090 Zm00028ab349090_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab349180 Zm00028ab349180_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab349180 Zm00028ab349180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab349180 Zm00028ab349180_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab349190 Zm00028ab349190_P004 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab349350 Zm00028ab349350_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab349350 Zm00028ab349350_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab349350 Zm00028ab349350_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab349430 Zm00028ab349430_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab349430 Zm00028ab349430_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab349490 Zm00028ab349490_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab349490 Zm00028ab349490_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab349580 Zm00028ab349580_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab349680 Zm00028ab349680_P003 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab350070 Zm00028ab350070_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00028ab350070 Zm00028ab350070_P001 NA PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00028ab350150 Zm00028ab350150_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00028ab350150 Zm00028ab350150_P001 conditional PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00028ab350150 Zm00028ab350150_P002 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00028ab350150 Zm00028ab350150_P002 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab350260 Zm00028ab350260_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab350740 Zm00028ab350740_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab350740 Zm00028ab350740_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab350740 Zm00028ab350740_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab350910 Zm00028ab350910_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab351130 Zm00028ab351130_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00028ab351130 Zm00028ab351130_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab351300 Zm00028ab351300_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00028ab351300 Zm00028ab351300_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab351360 Zm00028ab351360_P005 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab351430 Zm00028ab351430_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab351430 Zm00028ab351430_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab351430 Zm00028ab351430_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab351690 Zm00028ab351690_P001 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab351890 Zm00028ab351890_P001 ubiquitous PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab351970 Zm00028ab351970_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab352310 Zm00028ab352310_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab352310 Zm00028ab352310_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab352310 Zm00028ab352310_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab352310 Zm00028ab352310_P004 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00028ab352410 Zm00028ab352410_P003 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab352520 Zm00028ab352520_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab352520 Zm00028ab352520_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab352520 Zm00028ab352520_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab352930 Zm00028ab352930_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab352930 Zm00028ab352930_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab352930 Zm00028ab352930_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab353160 Zm00028ab353160_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab353180 Zm00028ab353180_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab353180 Zm00028ab353180_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab353180 Zm00028ab353180_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00028ab353180 Zm00028ab353180_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab353220 Zm00028ab353220_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab353220 Zm00028ab353220_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00028ab353240 Zm00028ab353240_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab353430 Zm00028ab353430_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab353430 Zm00028ab353430_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab353430 Zm00028ab353430_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab353430 Zm00028ab353430_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab353430 Zm00028ab353430_P005 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab353430 Zm00028ab353430_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab353480 Zm00028ab353480_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab353480 Zm00028ab353480_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab353480 Zm00028ab353480_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab353530 Zm00028ab353530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354070 Zm00028ab354070_P006 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab354220 Zm00028ab354220_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab354220 Zm00028ab354220_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab354220 Zm00028ab354220_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab354220 Zm00028ab354220_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354230 Zm00028ab354230_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab354230 Zm00028ab354230_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab354550 Zm00028ab354550_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab354550 Zm00028ab354550_P002 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab354560 Zm00028ab354560_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P004 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P004 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00028ab354610 Zm00028ab354610_P004 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab354670 Zm00028ab354670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab354670 Zm00028ab354670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab354670 Zm00028ab354670_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab354740 Zm00028ab354740_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab354740 Zm00028ab354740_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab354750 Zm00028ab354750_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab354750 Zm00028ab354750_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab354750 Zm00028ab354750_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab355050 Zm00028ab355050_P002 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab355240 Zm00028ab355240_P003 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab355330 Zm00028ab355330_P001 expected PWY-6019 pseudouridine degradation PSEUDOURIDINE-KINASE-RXN EC-2.7.1.83 Zm00028ab355550 Zm00028ab355550_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab355580 Zm00028ab355580_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab355590 Zm00028ab355590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab355590 Zm00028ab355590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab355590 Zm00028ab355590_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab355750 Zm00028ab355750_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab355750 Zm00028ab355750_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab355820 Zm00028ab355820_P001 expected PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00028ab356080 Zm00028ab356080_P001 viridiplantae PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00028ab356080 Zm00028ab356080_P002 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab356200 Zm00028ab356200_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab356650 Zm00028ab356650_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P003 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P003 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P003 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P003 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P003 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P004 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P004 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P004 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P004 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P004 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P005 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P005 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P005 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P005 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P005 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P006 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P006 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P006 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P006 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P006 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P006 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P007 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P007 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P007 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P007 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P007 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P007 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P008 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P008 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P008 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P008 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab356750 Zm00028ab356750_P008 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P008 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P008 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P008 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P008 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab356750 Zm00028ab356750_P008 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P008 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab356750 Zm00028ab356750_P008 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab356780 Zm00028ab356780_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab356830 Zm00028ab356830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab356830 Zm00028ab356830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab356830 Zm00028ab356830_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab356840 Zm00028ab356840_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab356920 Zm00028ab356920_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab356920 Zm00028ab356920_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab356920 Zm00028ab356920_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab356920 Zm00028ab356920_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab357010 Zm00028ab357010_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab357010 Zm00028ab357010_P002 viridiplantae PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357090 Zm00028ab357090_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357090 Zm00028ab357090_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357100 Zm00028ab357100_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357100 Zm00028ab357100_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357100 Zm00028ab357100_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357100 Zm00028ab357100_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357110 Zm00028ab357110_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357110 Zm00028ab357110_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357110 Zm00028ab357110_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357110 Zm00028ab357110_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357120 Zm00028ab357120_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357120 Zm00028ab357120_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357120 Zm00028ab357120_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357120 Zm00028ab357120_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357150 Zm00028ab357150_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357150 Zm00028ab357150_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357150 Zm00028ab357150_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357150 Zm00028ab357150_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357270 Zm00028ab357270_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357270 Zm00028ab357270_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357270 Zm00028ab357270_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357270 Zm00028ab357270_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab357280 Zm00028ab357280_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab357280 Zm00028ab357280_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab357280 Zm00028ab357280_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab357280 Zm00028ab357280_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab357390 Zm00028ab357390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab357400 Zm00028ab357400_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00028ab357570 Zm00028ab357570_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P002 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab357770 Zm00028ab357770_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00028ab357840 Zm00028ab357840_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00028ab357880 Zm00028ab357880_P002 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab357920 Zm00028ab357920_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab357920 Zm00028ab357920_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab357960 Zm00028ab357960_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab357960 Zm00028ab357960_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00028ab357960 Zm00028ab357960_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00028ab357960 Zm00028ab357960_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab358180 Zm00028ab358180_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab358180 Zm00028ab358180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab358180 Zm00028ab358180_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00028ab358710 Zm00028ab358710_P004 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab358800 Zm00028ab358800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab358800 Zm00028ab358800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab358800 Zm00028ab358800_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00028ab359000 Zm00028ab359000_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359040 Zm00028ab359040_P002 conditional PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00028ab359060 Zm00028ab359060_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab359060 Zm00028ab359060_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00028ab359060 Zm00028ab359060_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00028ab359060 Zm00028ab359060_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359100 Zm00028ab359100_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359100 Zm00028ab359100_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359100 Zm00028ab359100_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00028ab359110 Zm00028ab359110_P003 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab359170 Zm00028ab359170_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab359280 Zm00028ab359280_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab359290 Zm00028ab359290_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab359290 Zm00028ab359290_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab359290 Zm00028ab359290_P001 manual LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab359320 Zm00028ab359320_P001 ubiquitous PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab359340 Zm00028ab359340_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab359370 Zm00028ab359370_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab359370 Zm00028ab359370_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab359380 Zm00028ab359380_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab359390 Zm00028ab359390_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab359390 Zm00028ab359390_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab359390 Zm00028ab359390_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00028ab359400 Zm00028ab359400_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00028ab359400 Zm00028ab359400_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab359640 Zm00028ab359640_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab359640 Zm00028ab359640_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab359640 Zm00028ab359640_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab359870 Zm00028ab359870_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359960 Zm00028ab359960_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab359970 Zm00028ab359970_P004 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab359990 Zm00028ab359990_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab359990 Zm00028ab359990_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab359990 Zm00028ab359990_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab359990 Zm00028ab359990_P004 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab360110 Zm00028ab360110_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab360110 Zm00028ab360110_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00028ab360380 Zm00028ab360380_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab360570 Zm00028ab360570_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab360570 Zm00028ab360570_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab360600 Zm00028ab360600_P002 NA SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P006 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab360640 Zm00028ab360640_P006 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab360740 Zm00028ab360740_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00028ab360740 Zm00028ab360740_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00028ab360750 Zm00028ab360750_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab360870 Zm00028ab360870_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab360970 Zm00028ab360970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab360970 Zm00028ab360970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab360970 Zm00028ab360970_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab360980 Zm00028ab360980_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab360980 Zm00028ab360980_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab360980 Zm00028ab360980_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab361110 Zm00028ab361110_P002 manual PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab361160 Zm00028ab361160_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab361710 Zm00028ab361710_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab361710 Zm00028ab361710_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab361900 Zm00028ab361900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab361900 Zm00028ab361900_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab361960 Zm00028ab361960_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00028ab361990 Zm00028ab361990_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab362340 Zm00028ab362340_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab362340 Zm00028ab362340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab362600 Zm00028ab362600_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00028ab362620 Zm00028ab362620_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00028ab362620 Zm00028ab362620_P001 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00028ab362620 Zm00028ab362620_P002 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00028ab362620 Zm00028ab362620_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab362700 Zm00028ab362700_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab362700 Zm00028ab362700_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362780 Zm00028ab362780_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362810 Zm00028ab362810_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362810 Zm00028ab362810_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362850 Zm00028ab362850_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab362870 Zm00028ab362870_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab362870 Zm00028ab362870_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab362870 Zm00028ab362870_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362890 Zm00028ab362890_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362930 Zm00028ab362930_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab362980 Zm00028ab362980_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab363010 Zm00028ab363010_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab363150 Zm00028ab363150_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab363210 Zm00028ab363210_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab363380 Zm00028ab363380_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab363380 Zm00028ab363380_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab363380 Zm00028ab363380_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00028ab363380 Zm00028ab363380_P004 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab363410 Zm00028ab363410_P001 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00028ab363840 Zm00028ab363840_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00028ab363840 Zm00028ab363840_P002 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab363870 Zm00028ab363870_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab364010 Zm00028ab364010_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab364080 Zm00028ab364080_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab364080 Zm00028ab364080_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab364080 Zm00028ab364080_P003 viridiplantae PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P001 ubiquitous PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P003 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab364150 Zm00028ab364150_P003 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab364200 Zm00028ab364200_P001 expected SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab364300 Zm00028ab364300_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab364300 Zm00028ab364300_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab364300 Zm00028ab364300_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab364300 Zm00028ab364300_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab364300 Zm00028ab364300_P001 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab364320 Zm00028ab364320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab364320 Zm00028ab364320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab364320 Zm00028ab364320_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab364330 Zm00028ab364330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab364330 Zm00028ab364330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab364330 Zm00028ab364330_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab364450 Zm00028ab364450_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab364520 Zm00028ab364520_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00028ab364520 Zm00028ab364520_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00028ab364520 Zm00028ab364520_P001 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab364680 Zm00028ab364680_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab364680 Zm00028ab364680_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab364680 Zm00028ab364680_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00028ab364680 Zm00028ab364680_P004 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab364760 Zm00028ab364760_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab364760 Zm00028ab364760_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab364770 Zm00028ab364770_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab364770 Zm00028ab364770_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab364770 Zm00028ab364770_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab364800 Zm00028ab364800_P001 NA PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab365000 Zm00028ab365000_P001 ubiquitous PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab365100 Zm00028ab365100_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab365110 Zm00028ab365110_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab365110 Zm00028ab365110_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab365110 Zm00028ab365110_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab365110 Zm00028ab365110_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00028ab365240 Zm00028ab365240_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab365240 Zm00028ab365240_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab365240 Zm00028ab365240_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab365520 Zm00028ab365520_P001 NA PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab365640 Zm00028ab365640_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P001 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P001 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P001 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P002 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P002 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00028ab365650 Zm00028ab365650_P002 expected PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00028ab365900 Zm00028ab365900_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00028ab365900 Zm00028ab365900_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00028ab365900 Zm00028ab365900_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab366110 Zm00028ab366110_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab366110 Zm00028ab366110_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab366110 Zm00028ab366110_P001 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab366200 Zm00028ab366200_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00028ab366380 Zm00028ab366380_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00028ab366490 Zm00028ab366490_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab366620 Zm00028ab366620_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab366620 Zm00028ab366620_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab366620 Zm00028ab366620_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab366620 Zm00028ab366620_P004 ubiquitous PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00028ab366630 Zm00028ab366630_P001 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00028ab366630 Zm00028ab366630_P001 conditional PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00028ab366630 Zm00028ab366630_P002 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00028ab366630 Zm00028ab366630_P002 conditional PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab367310 Zm00028ab367310_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab367310 Zm00028ab367310_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab367310 Zm00028ab367310_P001 NA PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00028ab367350 Zm00028ab367350_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00028ab367350 Zm00028ab367350_P001 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab367480 Zm00028ab367480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab367710 Zm00028ab367710_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab367740 Zm00028ab367740_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab367740 Zm00028ab367740_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab367900 Zm00028ab367900_P002 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab367930 Zm00028ab367930_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab367930 Zm00028ab367930_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab367930 Zm00028ab367930_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab367930 Zm00028ab367930_P004 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab368020 Zm00028ab368020_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab368020 Zm00028ab368020_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P006 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P007 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P007 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P008 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00028ab368100 Zm00028ab368100_P008 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab368110 Zm00028ab368110_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab368480 Zm00028ab368480_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab368480 Zm00028ab368480_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab368480 Zm00028ab368480_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab368480 Zm00028ab368480_P001 NA PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab368560 Zm00028ab368560_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab368560 Zm00028ab368560_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab368570 Zm00028ab368570_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab368570 Zm00028ab368570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab368660 Zm00028ab368660_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab368660 Zm00028ab368660_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab368660 Zm00028ab368660_P003 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab368690 Zm00028ab368690_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab368950 Zm00028ab368950_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab368960 Zm00028ab368960_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab368970 Zm00028ab368970_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab368970 Zm00028ab368970_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00028ab369000 Zm00028ab369000_P005 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P002 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P003 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P004 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P005 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P006 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab369010 Zm00028ab369010_P007 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab369020 Zm00028ab369020_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab369020 Zm00028ab369020_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab369140 Zm00028ab369140_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab370070 Zm00028ab370070_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab370070 Zm00028ab370070_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab370070 Zm00028ab370070_P001 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P004 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P005 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00028ab370150 Zm00028ab370150_P005 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00028ab370240 Zm00028ab370240_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00028ab370240 Zm00028ab370240_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab370360 Zm00028ab370360_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab370480 Zm00028ab370480_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab370480 Zm00028ab370480_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab370550 Zm00028ab370550_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab370550 Zm00028ab370550_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab370550 Zm00028ab370550_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab370550 Zm00028ab370550_P001 ubiquitous PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab370860 Zm00028ab370860_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab370860 Zm00028ab370860_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00028ab370860 Zm00028ab370860_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab370860 Zm00028ab370860_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00028ab370860 Zm00028ab370860_P002 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab371000 Zm00028ab371000_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00028ab371000 Zm00028ab371000_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00028ab371080 Zm00028ab371080_P004 expected PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00028ab371190 Zm00028ab371190_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00028ab371190 Zm00028ab371190_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00028ab371190 Zm00028ab371190_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab371390 Zm00028ab371390_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab371390 Zm00028ab371390_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab371390 Zm00028ab371390_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab371390 Zm00028ab371390_P002 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab371420 Zm00028ab371420_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00028ab371420 Zm00028ab371420_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00028ab371460 Zm00028ab371460_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00028ab371460 Zm00028ab371460_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00028ab371460 Zm00028ab371460_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00028ab371460 Zm00028ab371460_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00028ab371460 Zm00028ab371460_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab371670 Zm00028ab371670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab371680 Zm00028ab371680_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab371720 Zm00028ab371720_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab371760 Zm00028ab371760_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab371770 Zm00028ab371770_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab371830 Zm00028ab371830_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab371830 Zm00028ab371830_P001 ubiquitous PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab371900 Zm00028ab371900_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab372020 Zm00028ab372020_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab372020 Zm00028ab372020_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab372160 Zm00028ab372160_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab372190 Zm00028ab372190_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab372190 Zm00028ab372190_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab372190 Zm00028ab372190_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab372240 Zm00028ab372240_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab372240 Zm00028ab372240_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab372240 Zm00028ab372240_P003 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P001 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P002 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00028ab372250 Zm00028ab372250_P003 NA PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERDECARB-RXN EC-4.1.1.65 Zm00028ab372410 Zm00028ab372410_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab372480 Zm00028ab372480_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab372480 Zm00028ab372480_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab372500 Zm00028ab372500_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00028ab372500 Zm00028ab372500_P002 viridiplantae PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab372620 Zm00028ab372620_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab372620 Zm00028ab372620_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab372620 Zm00028ab372620_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab372620 Zm00028ab372620_P001 ubiquitous PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00028ab372750 Zm00028ab372750_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00028ab372750 Zm00028ab372750_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab372960 Zm00028ab372960_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab372960 Zm00028ab372960_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab372960 Zm00028ab372960_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00028ab372970 Zm00028ab372970_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00028ab372970 Zm00028ab372970_P002 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00028ab372970 Zm00028ab372970_P003 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00028ab372970 Zm00028ab372970_P004 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab373080 Zm00028ab373080_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00028ab373100 Zm00028ab373100_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00028ab373100 Zm00028ab373100_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab373210 Zm00028ab373210_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab373430 Zm00028ab373430_P003 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab373570 Zm00028ab373570_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab373690 Zm00028ab373690_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab373690 Zm00028ab373690_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab373690 Zm00028ab373690_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab373690 Zm00028ab373690_P004 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab373710 Zm00028ab373710_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab373710 Zm00028ab373710_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab373730 Zm00028ab373730_P001 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab373740 Zm00028ab373740_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00028ab373740 Zm00028ab373740_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab373850 Zm00028ab373850_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab374160 Zm00028ab374160_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab374160 Zm00028ab374160_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab374290 Zm00028ab374290_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab374290 Zm00028ab374290_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab374290 Zm00028ab374290_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab374290 Zm00028ab374290_P002 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab374330 Zm00028ab374330_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab374340 Zm00028ab374340_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab374340 Zm00028ab374340_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab374610 Zm00028ab374610_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab374620 Zm00028ab374620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab374630 Zm00028ab374630_P001 viridiplantae PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab374730 Zm00028ab374730_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab374730 Zm00028ab374730_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab374730 Zm00028ab374730_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab374730 Zm00028ab374730_P002 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab374730 Zm00028ab374730_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab374740 Zm00028ab374740_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab374740 Zm00028ab374740_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab374740 Zm00028ab374740_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab374740 Zm00028ab374740_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab374740 Zm00028ab374740_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab374740 Zm00028ab374740_P002 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab374760 Zm00028ab374760_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab374760 Zm00028ab374760_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00028ab374960 Zm00028ab374960_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab374970 Zm00028ab374970_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab375000 Zm00028ab375000_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab375090 Zm00028ab375090_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab375150 Zm00028ab375150_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab375250 Zm00028ab375250_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab375250 Zm00028ab375250_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab375270 Zm00028ab375270_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab375270 Zm00028ab375270_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab375280 Zm00028ab375280_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab375280 Zm00028ab375280_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab375380 Zm00028ab375380_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab375540 Zm00028ab375540_P002 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab375560 Zm00028ab375560_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab375560 Zm00028ab375560_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab375560 Zm00028ab375560_P003 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00028ab375560 Zm00028ab375560_P004 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab375620 Zm00028ab375620_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab375620 Zm00028ab375620_P002 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00028ab375690 Zm00028ab375690_P004 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab375790 Zm00028ab375790_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab375790 Zm00028ab375790_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00028ab375790 Zm00028ab375790_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab375830 Zm00028ab375830_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab375830 Zm00028ab375830_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab375930 Zm00028ab375930_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab375930 Zm00028ab375930_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab375930 Zm00028ab375930_P003 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab376210 Zm00028ab376210_P002 excluded PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab376450 Zm00028ab376450_P001 conditional PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00028ab376730 Zm00028ab376730_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab376890 Zm00028ab376890_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab376930 Zm00028ab376930_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab376930 Zm00028ab376930_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab376930 Zm00028ab376930_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab376930 Zm00028ab376930_P002 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab377330 Zm00028ab377330_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab377330 Zm00028ab377330_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab377330 Zm00028ab377330_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab377330 Zm00028ab377330_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab377330 Zm00028ab377330_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab377330 Zm00028ab377330_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab377330 Zm00028ab377330_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab377330 Zm00028ab377330_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab377330 Zm00028ab377330_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab377330 Zm00028ab377330_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab377330 Zm00028ab377330_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab377330 Zm00028ab377330_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab377380 Zm00028ab377380_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00028ab377430 Zm00028ab377430_P002 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00028ab377500 Zm00028ab377500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab377510 Zm00028ab377510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab377510 Zm00028ab377510_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab377510 Zm00028ab377510_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab377510 Zm00028ab377510_P002 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab377720 Zm00028ab377720_P001 viridiplantae PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab378020 Zm00028ab378020_P001 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab378020 Zm00028ab378020_P002 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00028ab378020 Zm00028ab378020_P003 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab378180 Zm00028ab378180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab378180 Zm00028ab378180_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab378610 Zm00028ab378610_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab378610 Zm00028ab378610_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab378610 Zm00028ab378610_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab378610 Zm00028ab378610_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab378610 Zm00028ab378610_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00028ab379140 Zm00028ab379140_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00028ab379360 Zm00028ab379360_P003 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab379620 Zm00028ab379620_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab379650 Zm00028ab379650_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab379650 Zm00028ab379650_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00028ab380010 Zm00028ab380010_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab380110 Zm00028ab380110_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab380110 Zm00028ab380110_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab380160 Zm00028ab380160_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P003 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P003 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00028ab380200 Zm00028ab380200_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab380210 Zm00028ab380210_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab380240 Zm00028ab380240_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab380240 Zm00028ab380240_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab380240 Zm00028ab380240_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab380240 Zm00028ab380240_P004 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00028ab380460 Zm00028ab380460_P002 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P004 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab380480 Zm00028ab380480_P004 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab380490 Zm00028ab380490_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab380490 Zm00028ab380490_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00028ab380500 Zm00028ab380500_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab380540 Zm00028ab380540_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab380890 Zm00028ab380890_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab380920 Zm00028ab380920_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab380920 Zm00028ab380920_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab380920 Zm00028ab380920_P002 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00028ab381040 Zm00028ab381040_P002 manual PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab381480 Zm00028ab381480_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab381480 Zm00028ab381480_P002 ubiquitous PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab381520 Zm00028ab381520_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab381590 Zm00028ab381590_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab381590 Zm00028ab381590_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00028ab381590 Zm00028ab381590_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab381620 Zm00028ab381620_P001 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab381640 Zm00028ab381640_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00028ab382060 Zm00028ab382060_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P004 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P004 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00028ab382170 Zm00028ab382170_P004 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00028ab382240 Zm00028ab382240_P001 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab382320 Zm00028ab382320_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00028ab382340 Zm00028ab382340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab382420 Zm00028ab382420_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab382420 Zm00028ab382420_P002 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00028ab382450 Zm00028ab382450_P001 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab382550 Zm00028ab382550_P001 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00028ab382810 Zm00028ab382810_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00028ab382810 Zm00028ab382810_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab382870 Zm00028ab382870_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab382880 Zm00028ab382880_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00028ab382900 Zm00028ab382900_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00028ab382970 Zm00028ab382970_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00028ab382970 Zm00028ab382970_P002 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00028ab382970 Zm00028ab382970_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab382970 Zm00028ab382970_P004 conditional PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00028ab382970 Zm00028ab382970_P004 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab382980 Zm00028ab382980_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab382980 Zm00028ab382980_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab382980 Zm00028ab382980_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P002 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00028ab383120 Zm00028ab383120_P003 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab383180 Zm00028ab383180_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab383180 Zm00028ab383180_P001 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00028ab383500 Zm00028ab383500_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00028ab383700 Zm00028ab383700_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00028ab383700 Zm00028ab383700_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00028ab383700 Zm00028ab383700_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00028ab383780 Zm00028ab383780_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab383780 Zm00028ab383780_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00028ab383780 Zm00028ab383780_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00028ab383780 Zm00028ab383780_P002 conditional COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P004 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P004 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P005 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P005 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P006 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P006 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P007 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P007 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P008 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00028ab383960 Zm00028ab383960_P008 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab384030 Zm00028ab384030_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab384030 Zm00028ab384030_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00028ab384030 Zm00028ab384030_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab384050 Zm00028ab384050_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab384050 Zm00028ab384050_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00028ab384050 Zm00028ab384050_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab384130 Zm00028ab384130_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab384130 Zm00028ab384130_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab384130 Zm00028ab384130_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab384130 Zm00028ab384130_P004 expected PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00028ab384140 Zm00028ab384140_P001 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00028ab384140 Zm00028ab384140_P002 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00028ab384140 Zm00028ab384140_P003 conditional PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00028ab384280 Zm00028ab384280_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00028ab384280 Zm00028ab384280_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00028ab384280 Zm00028ab384280_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00028ab384280 Zm00028ab384280_P001 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab384430 Zm00028ab384430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab384540 Zm00028ab384540_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab384550 Zm00028ab384550_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab384570 Zm00028ab384570_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab384570 Zm00028ab384570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00028ab384570 Zm00028ab384570_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00028ab384570 Zm00028ab384570_P001 NA PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab384900 Zm00028ab384900_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab385190 Zm00028ab385190_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab385340 Zm00028ab385340_P001 ubiquitous PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab385440 Zm00028ab385440_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab385440 Zm00028ab385440_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab385440 Zm00028ab385440_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab385440 Zm00028ab385440_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00028ab385440 Zm00028ab385440_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00028ab385440 Zm00028ab385440_P003 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00028ab385480 Zm00028ab385480_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00028ab385540 Zm00028ab385540_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab385540 Zm00028ab385540_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab385540 Zm00028ab385540_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00028ab385540 Zm00028ab385540_P001 ubiquitous PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab385680 Zm00028ab385680_P004 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab385990 Zm00028ab385990_P001 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab386120 Zm00028ab386120_P002 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab386200 Zm00028ab386200_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab386200 Zm00028ab386200_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab386200 Zm00028ab386200_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab386510 Zm00028ab386510_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab386510 Zm00028ab386510_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab386510 Zm00028ab386510_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab386550 Zm00028ab386550_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab386610 Zm00028ab386610_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab386630 Zm00028ab386630_P002 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00028ab386710 Zm00028ab386710_P001 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00028ab386710 Zm00028ab386710_P002 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00028ab386710 Zm00028ab386710_P003 conditional PWY-6730 methylhalides biosynthesis (plants) RXN-11241 EC-2.1.1.165 Zm00028ab386710 Zm00028ab386710_P004 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab386760 Zm00028ab386760_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00028ab386820 Zm00028ab386820_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00028ab386820 Zm00028ab386820_P003 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab386860 Zm00028ab386860_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab386860 Zm00028ab386860_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab386860 Zm00028ab386860_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386870 Zm00028ab386870_P004 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab386960 Zm00028ab386960_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab386990 Zm00028ab386990_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab387000 Zm00028ab387000_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab387000 Zm00028ab387000_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab387030 Zm00028ab387030_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab387030 Zm00028ab387030_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00028ab387060 Zm00028ab387060_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab387120 Zm00028ab387120_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab387220 Zm00028ab387220_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab387220 Zm00028ab387220_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab387220 Zm00028ab387220_P003 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00028ab387350 Zm00028ab387350_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab387360 Zm00028ab387360_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab387360 Zm00028ab387360_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab387370 Zm00028ab387370_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab387400 Zm00028ab387400_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab387400 Zm00028ab387400_P002 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab387450 Zm00028ab387450_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab387550 Zm00028ab387550_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab387570 Zm00028ab387570_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab387570 Zm00028ab387570_P001 viridiplantae PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00028ab387770 Zm00028ab387770_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P004 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P005 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab387870 Zm00028ab387870_P006 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab387980 Zm00028ab387980_P001 NA PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00028ab388010 Zm00028ab388010_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00028ab388010 Zm00028ab388010_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P002 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P003 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00028ab388020 Zm00028ab388020_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab388070 Zm00028ab388070_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab388070 Zm00028ab388070_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00028ab388150 Zm00028ab388150_P001 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab388220 Zm00028ab388220_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab388220 Zm00028ab388220_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab388220 Zm00028ab388220_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab388320 Zm00028ab388320_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab388320 Zm00028ab388320_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab388490 Zm00028ab388490_P003 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab388500 Zm00028ab388500_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab388500 Zm00028ab388500_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab388500 Zm00028ab388500_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab388500 Zm00028ab388500_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab388500 Zm00028ab388500_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab388730 Zm00028ab388730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab388730 Zm00028ab388730_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00028ab388760 Zm00028ab388760_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00028ab388760 Zm00028ab388760_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab388760 Zm00028ab388760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab388760 Zm00028ab388760_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00028ab388760 Zm00028ab388760_P001 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab388800 Zm00028ab388800_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab388800 Zm00028ab388800_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00028ab388800 Zm00028ab388800_P003 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab388890 Zm00028ab388890_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab388890 Zm00028ab388890_P001 expected LYSINE-DEG2-PWY lysine degradation II ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00028ab389010 Zm00028ab389010_P001 NA PWYQT-1 lysine degradation III ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00028ab389010 Zm00028ab389010_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab389080 Zm00028ab389080_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab389080 Zm00028ab389080_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab389100 Zm00028ab389100_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab389100 Zm00028ab389100_P002 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab389110 Zm00028ab389110_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab389110 Zm00028ab389110_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab389110 Zm00028ab389110_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00028ab389110 Zm00028ab389110_P004 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab389250 Zm00028ab389250_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab389250 Zm00028ab389250_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00028ab389310 Zm00028ab389310_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab389410 Zm00028ab389410_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab389410 Zm00028ab389410_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab389410 Zm00028ab389410_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P002 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P003 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P004 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P004 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab389540 Zm00028ab389540_P004 NA TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00028ab389560 Zm00028ab389560_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00028ab389560 Zm00028ab389560_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00028ab389560 Zm00028ab389560_P003 conditional PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00028ab389840 Zm00028ab389840_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab389840 Zm00028ab389840_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00028ab389840 Zm00028ab389840_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00028ab389840 Zm00028ab389840_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab389900 Zm00028ab389900_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab389920 Zm00028ab389920_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab389920 Zm00028ab389920_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab389920 Zm00028ab389920_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab390020 Zm00028ab390020_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab390070 Zm00028ab390070_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab390080 Zm00028ab390080_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00028ab390240 Zm00028ab390240_P003 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab390300 Zm00028ab390300_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab390310 Zm00028ab390310_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab390590 Zm00028ab390590_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab390590 Zm00028ab390590_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab390710 Zm00028ab390710_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab390710 Zm00028ab390710_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00028ab390890 Zm00028ab390890_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab391000 Zm00028ab391000_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab391000 Zm00028ab391000_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab391000 Zm00028ab391000_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00028ab391160 Zm00028ab391160_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00028ab391160 Zm00028ab391160_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab391220 Zm00028ab391220_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab391220 Zm00028ab391220_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab391220 Zm00028ab391220_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab391230 Zm00028ab391230_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab391230 Zm00028ab391230_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab391230 Zm00028ab391230_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab391750 Zm00028ab391750_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab391750 Zm00028ab391750_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab391790 Zm00028ab391790_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab391790 Zm00028ab391790_P002 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P002 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P003 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00028ab392110 Zm00028ab392110_P003 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00028ab392160 Zm00028ab392160_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab392230 Zm00028ab392230_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab392230 Zm00028ab392230_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab392330 Zm00028ab392330_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab392370 Zm00028ab392370_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab392370 Zm00028ab392370_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab392410 Zm00028ab392410_P004 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab392550 Zm00028ab392550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab392550 Zm00028ab392550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab392550 Zm00028ab392550_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab392630 Zm00028ab392630_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab392630 Zm00028ab392630_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab392690 Zm00028ab392690_P001 expected ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P001 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P002 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P003 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P004 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P005 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P006 NA ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00028ab393010 Zm00028ab393010_P007 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab393230 Zm00028ab393230_P002 conditional PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P003 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P004 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P005 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P006 viridiplantae PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00028ab393530 Zm00028ab393530_P007 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab393550 Zm00028ab393550_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab393680 Zm00028ab393680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393680 Zm00028ab393680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393680 Zm00028ab393680_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab393740 Zm00028ab393740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393740 Zm00028ab393740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393740 Zm00028ab393740_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab393750 Zm00028ab393750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393750 Zm00028ab393750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab393750 Zm00028ab393750_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab393940 Zm00028ab393940_P006 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00028ab394130 Zm00028ab394130_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00028ab394130 Zm00028ab394130_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00028ab394130 Zm00028ab394130_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab394990 Zm00028ab394990_P005 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab395110 Zm00028ab395110_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab395160 Zm00028ab395160_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00028ab395160 Zm00028ab395160_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab395250 Zm00028ab395250_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab395710 Zm00028ab395710_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab395710 Zm00028ab395710_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab395710 Zm00028ab395710_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab395800 Zm00028ab395800_P002 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab395840 Zm00028ab395840_P003 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00028ab395860 Zm00028ab395860_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00028ab395860 Zm00028ab395860_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00028ab395860 Zm00028ab395860_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab395940 Zm00028ab395940_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab395990 Zm00028ab395990_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab396000 Zm00028ab396000_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab396150 Zm00028ab396150_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00028ab396210 Zm00028ab396210_P003 ubiquitous PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab396320 Zm00028ab396320_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00028ab396320 Zm00028ab396320_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00028ab396480 Zm00028ab396480_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab396630 Zm00028ab396630_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00028ab396660 Zm00028ab396660_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00028ab396660 Zm00028ab396660_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab396960 Zm00028ab396960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab396960 Zm00028ab396960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab396960 Zm00028ab396960_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab396960 Zm00028ab396960_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab396960 Zm00028ab396960_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab396960 Zm00028ab396960_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab396960 Zm00028ab396960_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab396970 Zm00028ab396970_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab396970 Zm00028ab396970_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab396970 Zm00028ab396970_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00028ab396970 Zm00028ab396970_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab397060 Zm00028ab397060_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab397060 Zm00028ab397060_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab397060 Zm00028ab397060_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00028ab397080 Zm00028ab397080_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00028ab397080 Zm00028ab397080_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00028ab397080 Zm00028ab397080_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00028ab397160 Zm00028ab397160_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab397230 Zm00028ab397230_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab397230 Zm00028ab397230_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab397230 Zm00028ab397230_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab397230 Zm00028ab397230_P004 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab397230 Zm00028ab397230_P005 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P003 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P003 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00028ab397240 Zm00028ab397240_P003 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab397420 Zm00028ab397420_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00028ab397420 Zm00028ab397420_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab397730 Zm00028ab397730_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab397730 Zm00028ab397730_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab397730 Zm00028ab397730_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab397730 Zm00028ab397730_P004 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397760 Zm00028ab397760_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397760 Zm00028ab397760_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397770 Zm00028ab397770_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397770 Zm00028ab397770_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397810 Zm00028ab397810_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397810 Zm00028ab397810_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397810 Zm00028ab397810_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397810 Zm00028ab397810_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397820 Zm00028ab397820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397840 Zm00028ab397840_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab397840 Zm00028ab397840_P002 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00028ab398140 Zm00028ab398140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab398390 Zm00028ab398390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab398390 Zm00028ab398390_P002 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab398440 Zm00028ab398440_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P005 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P006 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P006 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00028ab398540 Zm00028ab398540_P006 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab398700 Zm00028ab398700_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab398700 Zm00028ab398700_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab398700 Zm00028ab398700_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab398700 Zm00028ab398700_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab398970 Zm00028ab398970_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab398970 Zm00028ab398970_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab398980 Zm00028ab398980_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab398980 Zm00028ab398980_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab399020 Zm00028ab399020_P001 ubiquitous PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00028ab399190 Zm00028ab399190_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00028ab399190 Zm00028ab399190_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab399280 Zm00028ab399280_P001 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab399330 Zm00028ab399330_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00028ab399330 Zm00028ab399330_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab399340 Zm00028ab399340_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab399340 Zm00028ab399340_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab399340 Zm00028ab399340_P003 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab399410 Zm00028ab399410_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab399410 Zm00028ab399410_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab399410 Zm00028ab399410_P003 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab399410 Zm00028ab399410_P004 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00028ab399410 Zm00028ab399410_P005 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab399480 Zm00028ab399480_P002 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab399560 Zm00028ab399560_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00028ab399740 Zm00028ab399740_P001 conditional PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00028ab399810 Zm00028ab399810_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00028ab399810 Zm00028ab399810_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab400020 Zm00028ab400020_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab400020 Zm00028ab400020_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab400020 Zm00028ab400020_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00028ab400020 Zm00028ab400020_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab400100 Zm00028ab400100_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab400100 Zm00028ab400100_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00028ab400100 Zm00028ab400100_P003 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab400310 Zm00028ab400310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab400310 Zm00028ab400310_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab400310 Zm00028ab400310_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab400310 Zm00028ab400310_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab400310 Zm00028ab400310_P005 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab400320 Zm00028ab400320_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab400660 Zm00028ab400660_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab400730 Zm00028ab400730_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab400730 Zm00028ab400730_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab400730 Zm00028ab400730_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab400740 Zm00028ab400740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab400740 Zm00028ab400740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab400740 Zm00028ab400740_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab400820 Zm00028ab400820_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab400820 Zm00028ab400820_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab400820 Zm00028ab400820_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab400820 Zm00028ab400820_P002 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab400830 Zm00028ab400830_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab400910 Zm00028ab400910_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab400910 Zm00028ab400910_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab400940 Zm00028ab400940_P005 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab401100 Zm00028ab401100_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00028ab401100 Zm00028ab401100_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab401600 Zm00028ab401600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab401600 Zm00028ab401600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab401600 Zm00028ab401600_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab401680 Zm00028ab401680_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab401680 Zm00028ab401680_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab401680 Zm00028ab401680_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab401680 Zm00028ab401680_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00028ab401680 Zm00028ab401680_P005 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00028ab401830 Zm00028ab401830_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab401830 Zm00028ab401830_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00028ab401830 Zm00028ab401830_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab402040 Zm00028ab402040_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab402050 Zm00028ab402050_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P005 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00028ab402110 Zm00028ab402110_P005 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00028ab402210 Zm00028ab402210_P002 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00028ab402210 Zm00028ab402210_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab402210 Zm00028ab402210_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00028ab402210 Zm00028ab402210_P003 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00028ab402210 Zm00028ab402210_P004 NA PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab402260 Zm00028ab402260_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab402260 Zm00028ab402260_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00028ab402260 Zm00028ab402260_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00028ab402260 Zm00028ab402260_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab402320 Zm00028ab402320_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab402320 Zm00028ab402320_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab402320 Zm00028ab402320_P001 conditional PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P001 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P001 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P001 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P001 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P002 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P002 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P002 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P002 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P007 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P007 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P007 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P007 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P008 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P008 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P008 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P008 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P009 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00028ab402560 Zm00028ab402560_P009 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P009 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00028ab402560 Zm00028ab402560_P009 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab402820 Zm00028ab402820_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab402820 Zm00028ab402820_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab402820 Zm00028ab402820_P003 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P004 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P004 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P005 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00028ab402830 Zm00028ab402830_P005 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab402920 Zm00028ab402920_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab403010 Zm00028ab403010_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab403150 Zm00028ab403150_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab403150 Zm00028ab403150_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab403310 Zm00028ab403310_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00028ab403450 Zm00028ab403450_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab403630 Zm00028ab403630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab403630 Zm00028ab403630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab403630 Zm00028ab403630_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab403780 Zm00028ab403780_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab403780 Zm00028ab403780_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab403780 Zm00028ab403780_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00028ab403800 Zm00028ab403800_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab403900 Zm00028ab403900_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab403900 Zm00028ab403900_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00028ab404270 Zm00028ab404270_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8609 EC-4.2.3.86 Zm00028ab404270 Zm00028ab404270_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00028ab404350 Zm00028ab404350_P004 conditional DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab404370 Zm00028ab404370_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab404370 Zm00028ab404370_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab404370 Zm00028ab404370_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab404370 Zm00028ab404370_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab404480 Zm00028ab404480_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00028ab404480 Zm00028ab404480_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab404700 Zm00028ab404700_P006 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab404710 Zm00028ab404710_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab404710 Zm00028ab404710_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00028ab404730 Zm00028ab404730_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00028ab404730 Zm00028ab404730_P001 conditional PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00028ab404770 Zm00028ab404770_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab404980 Zm00028ab404980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab404980 Zm00028ab404980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab404980 Zm00028ab404980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab405030 Zm00028ab405030_P002 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab405130 Zm00028ab405130_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab405130 Zm00028ab405130_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab405290 Zm00028ab405290_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab405290 Zm00028ab405290_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab405290 Zm00028ab405290_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab405470 Zm00028ab405470_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab405640 Zm00028ab405640_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00028ab405680 Zm00028ab405680_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab405710 Zm00028ab405710_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab405710 Zm00028ab405710_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab405770 Zm00028ab405770_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab405850 Zm00028ab405850_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00028ab405890 Zm00028ab405890_P004 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab405940 Zm00028ab405940_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab406170 Zm00028ab406170_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab406170 Zm00028ab406170_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab406170 Zm00028ab406170_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab406170 Zm00028ab406170_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab406170 Zm00028ab406170_P005 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406200 Zm00028ab406200_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406200 Zm00028ab406200_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406210 Zm00028ab406210_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406210 Zm00028ab406210_P001 ubiquitous PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00028ab406230 Zm00028ab406230_P001 conditional PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00028ab406230 Zm00028ab406230_P002 conditional PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00028ab406230 Zm00028ab406230_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00028ab406240 Zm00028ab406240_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab406270 Zm00028ab406270_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab406280 Zm00028ab406280_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406290 Zm00028ab406290_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406290 Zm00028ab406290_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab406310 Zm00028ab406310_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406320 Zm00028ab406320_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406320 Zm00028ab406320_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab406350 Zm00028ab406350_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406360 Zm00028ab406360_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00028ab406360 Zm00028ab406360_P001 ubiquitous PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab406420 Zm00028ab406420_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00028ab406420 Zm00028ab406420_P001 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab406440 Zm00028ab406440_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00028ab406450 Zm00028ab406450_P003 NA PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P001 conditional PWY-4984 urea cycle ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P002 conditional PWY-4984 urea cycle ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00028ab406500 Zm00028ab406500_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab406510 Zm00028ab406510_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab406510 Zm00028ab406510_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab406670 Zm00028ab406670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab406670 Zm00028ab406670_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab406670 Zm00028ab406670_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab406680 Zm00028ab406680_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab406680 Zm00028ab406680_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab406680 Zm00028ab406680_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab406680 Zm00028ab406680_P004 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab406700 Zm00028ab406700_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab406760 Zm00028ab406760_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00028ab406770 Zm00028ab406770_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab406800 Zm00028ab406800_P001 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00028ab406840 Zm00028ab406840_P001 ubiquitous PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab406960 Zm00028ab406960_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab406960 Zm00028ab406960_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab406960 Zm00028ab406960_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab406960 Zm00028ab406960_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab406960 Zm00028ab406960_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab406970 Zm00028ab406970_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab406970 Zm00028ab406970_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab406970 Zm00028ab406970_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab406970 Zm00028ab406970_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab406970 Zm00028ab406970_P001 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab407140 Zm00028ab407140_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab407140 Zm00028ab407140_P002 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00028ab407190 Zm00028ab407190_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab407240 Zm00028ab407240_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab407240 Zm00028ab407240_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab407250 Zm00028ab407250_P001 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P003 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P004 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P005 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P006 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00028ab407340 Zm00028ab407340_P007 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab407340 Zm00028ab407340_P007 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab407360 Zm00028ab407360_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab407360 Zm00028ab407360_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab407360 Zm00028ab407360_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00028ab407390 Zm00028ab407390_P001 conditional PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab407470 Zm00028ab407470_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00028ab407470 Zm00028ab407470_P002 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab407590 Zm00028ab407590_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab407590 Zm00028ab407590_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00028ab407930 Zm00028ab407930_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab407940 Zm00028ab407940_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00028ab407940 Zm00028ab407940_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab408080 Zm00028ab408080_P001 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00028ab408330 Zm00028ab408330_P002 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00028ab408500 Zm00028ab408500_P006 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab408610 Zm00028ab408610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab408610 Zm00028ab408610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab408610 Zm00028ab408610_P001 conditional PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab408710 Zm00028ab408710_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab408710 Zm00028ab408710_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab408710 Zm00028ab408710_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab408710 Zm00028ab408710_P001 manual PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab408750 Zm00028ab408750_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab408750 Zm00028ab408750_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab408750 Zm00028ab408750_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00028ab408750 Zm00028ab408750_P004 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab408820 Zm00028ab408820_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab408820 Zm00028ab408820_P002 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00028ab408820 Zm00028ab408820_P003 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab408840 Zm00028ab408840_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00028ab408840 Zm00028ab408840_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab408900 Zm00028ab408900_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab408900 Zm00028ab408900_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00028ab408900 Zm00028ab408900_P003 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab409000 Zm00028ab409000_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab409000 Zm00028ab409000_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab409000 Zm00028ab409000_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P005 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00028ab409060 Zm00028ab409060_P006 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab409160 Zm00028ab409160_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab409440 Zm00028ab409440_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab409440 Zm00028ab409440_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00028ab409440 Zm00028ab409440_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab409450 Zm00028ab409450_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab409470 Zm00028ab409470_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab409570 Zm00028ab409570_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab409570 Zm00028ab409570_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab409570 Zm00028ab409570_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab409570 Zm00028ab409570_P004 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab409570 Zm00028ab409570_P004 NA PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P002 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P003 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P004 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P005 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00028ab409610 Zm00028ab409610_P006 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab409880 Zm00028ab409880_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab409880 Zm00028ab409880_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00028ab409880 Zm00028ab409880_P002 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00028ab409880 Zm00028ab409880_P002 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00028ab409940 Zm00028ab409940_P002 excluded PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00028ab409970 Zm00028ab409970_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab410090 Zm00028ab410090_P002 NA PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab410180 Zm00028ab410180_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab410190 Zm00028ab410190_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab410190 Zm00028ab410190_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab410190 Zm00028ab410190_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab410350 Zm00028ab410350_P001 conditional PWY-5116 sakuranetin biosynthesis RXN-7773 EC-2.1.1.232 Zm00028ab410450 Zm00028ab410450_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab410560 Zm00028ab410560_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab410560 Zm00028ab410560_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab410560 Zm00028ab410560_P003 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab410580 Zm00028ab410580_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00028ab410590 Zm00028ab410590_P001 expected PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00028ab410650 Zm00028ab410650_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab410650 Zm00028ab410650_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00028ab410650 Zm00028ab410650_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00028ab410650 Zm00028ab410650_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00028ab410650 Zm00028ab410650_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00028ab410650 Zm00028ab410650_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab410680 Zm00028ab410680_P001 expected PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab410870 Zm00028ab410870_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab410870 Zm00028ab410870_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab410870 Zm00028ab410870_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00028ab410870 Zm00028ab410870_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00028ab410890 Zm00028ab410890_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P004 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P005 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00028ab411100 Zm00028ab411100_P006 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411110 Zm00028ab411110_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P005 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab411130 Zm00028ab411130_P006 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00028ab411580 Zm00028ab411580_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab412020 Zm00028ab412020_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab412160 Zm00028ab412160_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab412160 Zm00028ab412160_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab412160 Zm00028ab412160_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab412210 Zm00028ab412210_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab412210 Zm00028ab412210_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab412210 Zm00028ab412210_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab412250 Zm00028ab412250_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab412250 Zm00028ab412250_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab412250 Zm00028ab412250_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00028ab412250 Zm00028ab412250_P004 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00028ab412480 Zm00028ab412480_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00028ab412480 Zm00028ab412480_P004 ubiquitous PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00028ab412560 Zm00028ab412560_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab412620 Zm00028ab412620_P001 expected PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab412790 Zm00028ab412790_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00028ab412790 Zm00028ab412790_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00028ab412870 Zm00028ab412870_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab412900 Zm00028ab412900_P001 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00028ab412950 Zm00028ab412950_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab413010 Zm00028ab413010_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab413140 Zm00028ab413140_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab413140 Zm00028ab413140_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab413140 Zm00028ab413140_P001 conditional PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00028ab413170 Zm00028ab413170_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00028ab413330 Zm00028ab413330_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab413390 Zm00028ab413390_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00028ab413390 Zm00028ab413390_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00028ab413390 Zm00028ab413390_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab413660 Zm00028ab413660_P002 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab413690 Zm00028ab413690_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab413690 Zm00028ab413690_P002 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab413700 Zm00028ab413700_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00028ab413860 Zm00028ab413860_P002 expected PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00028ab414010 Zm00028ab414010_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab414080 Zm00028ab414080_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00028ab414180 Zm00028ab414180_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab414280 Zm00028ab414280_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab414280 Zm00028ab414280_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab414420 Zm00028ab414420_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab414420 Zm00028ab414420_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00028ab414420 Zm00028ab414420_P003 ubiquitous PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab414560 Zm00028ab414560_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab414560 Zm00028ab414560_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab414560 Zm00028ab414560_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00028ab414630 Zm00028ab414630_P002 NA PWY-7985 oxalate degradation VI OXALATE--COA-LIGASE-RXN EC-6.2.1.8 Zm00028ab414680 Zm00028ab414680_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab414800 Zm00028ab414800_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab414800 Zm00028ab414800_P002 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab414830 Zm00028ab414830_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00028ab414860 Zm00028ab414860_P003 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00028ab414950 Zm00028ab414950_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00028ab414950 Zm00028ab414950_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab415030 Zm00028ab415030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab415030 Zm00028ab415030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab415030 Zm00028ab415030_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab415040 Zm00028ab415040_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab415040 Zm00028ab415040_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab415040 Zm00028ab415040_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab415050 Zm00028ab415050_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab415050 Zm00028ab415050_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab415050 Zm00028ab415050_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab415060 Zm00028ab415060_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab415060 Zm00028ab415060_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab415060 Zm00028ab415060_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab415070 Zm00028ab415070_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab415090 Zm00028ab415090_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab415090 Zm00028ab415090_P005 ubiquitous ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab415180 Zm00028ab415180_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab415180 Zm00028ab415180_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab415180 Zm00028ab415180_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00028ab415180 Zm00028ab415180_P002 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab415340 Zm00028ab415340_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab415350 Zm00028ab415350_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab415470 Zm00028ab415470_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab415530 Zm00028ab415530_P001 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00028ab415600 Zm00028ab415600_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00028ab415760 Zm00028ab415760_P001 conditional PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00028ab415760 Zm00028ab415760_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab415900 Zm00028ab415900_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00028ab415900 Zm00028ab415900_P003 expected HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab415990 Zm00028ab415990_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00028ab415990 Zm00028ab415990_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab416130 Zm00028ab416130_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab416180 Zm00028ab416180_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab416180 Zm00028ab416180_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab416180 Zm00028ab416180_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab416230 Zm00028ab416230_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab416230 Zm00028ab416230_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab416230 Zm00028ab416230_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab416460 Zm00028ab416460_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab416460 Zm00028ab416460_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab416460 Zm00028ab416460_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab416680 Zm00028ab416680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab416680 Zm00028ab416680_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab417170 Zm00028ab417170_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab417170 Zm00028ab417170_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab417170 Zm00028ab417170_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab417170 Zm00028ab417170_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417290 Zm00028ab417290_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417300 Zm00028ab417300_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417330 Zm00028ab417330_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab417390 Zm00028ab417390_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab417390 Zm00028ab417390_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab417430 Zm00028ab417430_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab417430 Zm00028ab417430_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417470 Zm00028ab417470_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417470 Zm00028ab417470_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417470 Zm00028ab417470_P003 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab417480 Zm00028ab417480_P001 conditional PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00028ab417600 Zm00028ab417600_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00028ab417600 Zm00028ab417600_P002 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00028ab417690 Zm00028ab417690_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab417750 Zm00028ab417750_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00028ab417750 Zm00028ab417750_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab417750 Zm00028ab417750_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00028ab417750 Zm00028ab417750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab417800 Zm00028ab417800_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab417800 Zm00028ab417800_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab417800 Zm00028ab417800_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00028ab418210 Zm00028ab418210_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab418630 Zm00028ab418630_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab418630 Zm00028ab418630_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab418630 Zm00028ab418630_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab418630 Zm00028ab418630_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab418630 Zm00028ab418630_P005 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab418650 Zm00028ab418650_P004 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00028ab418890 Zm00028ab418890_P003 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab419080 Zm00028ab419080_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00028ab419220 Zm00028ab419220_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab419300 Zm00028ab419300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab419300 Zm00028ab419300_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab419300 Zm00028ab419300_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab419300 Zm00028ab419300_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00028ab419500 Zm00028ab419500_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1884 EC-1.1.1.316 Zm00028ab419510 Zm00028ab419510_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00028ab419540 Zm00028ab419540_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00028ab419550 Zm00028ab419550_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00028ab419550 Zm00028ab419550_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab419590 Zm00028ab419590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab419590 Zm00028ab419590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab419590 Zm00028ab419590_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab419810 Zm00028ab419810_P001 ubiquitous PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab419830 Zm00028ab419830_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00028ab419830 Zm00028ab419830_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P005 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P006 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P007 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00028ab419900 Zm00028ab419900_P008 viridiplantae PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab420040 Zm00028ab420040_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00028ab420040 Zm00028ab420040_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab420050 Zm00028ab420050_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab420050 Zm00028ab420050_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P003 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P004 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P004 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P005 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P005 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P006 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00028ab420200 Zm00028ab420200_P006 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab420490 Zm00028ab420490_P001 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00028ab420500 Zm00028ab420500_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00028ab420500 Zm00028ab420500_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab420510 Zm00028ab420510_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab420510 Zm00028ab420510_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00028ab420510 Zm00028ab420510_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00028ab420510 Zm00028ab420510_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00028ab420510 Zm00028ab420510_P001 viridiplantae PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00028ab420570 Zm00028ab420570_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00028ab420610 Zm00028ab420610_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00028ab420610 Zm00028ab420610_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab420760 Zm00028ab420760_P001 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab420810 Zm00028ab420810_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab420810 Zm00028ab420810_P001 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab420810 Zm00028ab420810_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00028ab420810 Zm00028ab420810_P002 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab420900 Zm00028ab420900_P003 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00028ab420910 Zm00028ab420910_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00028ab420910 Zm00028ab420910_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00028ab420910 Zm00028ab420910_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00028ab420910 Zm00028ab420910_P004 viridiplantae PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00028ab421060 Zm00028ab421060_P001 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00028ab421090 Zm00028ab421090_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab421230 Zm00028ab421230_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00028ab421260 Zm00028ab421260_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab421300 Zm00028ab421300_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00028ab421320 Zm00028ab421320_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P005 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P006 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P007 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00028ab421400 Zm00028ab421400_P008 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab421450 Zm00028ab421450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab421450 Zm00028ab421450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab421450 Zm00028ab421450_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab421580 Zm00028ab421580_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab421580 Zm00028ab421580_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab421580 Zm00028ab421580_P003 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab421600 Zm00028ab421600_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab421600 Zm00028ab421600_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab421630 Zm00028ab421630_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab421630 Zm00028ab421630_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00028ab421630 Zm00028ab421630_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab421850 Zm00028ab421850_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab421900 Zm00028ab421900_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab422030 Zm00028ab422030_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P006 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P007 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P007 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P007 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P008 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P008 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P008 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P009 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P009 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab422040 Zm00028ab422040_P009 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab422160 Zm00028ab422160_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab422160 Zm00028ab422160_P002 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00028ab422240 Zm00028ab422240_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab422240 Zm00028ab422240_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00028ab422240 Zm00028ab422240_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00028ab422240 Zm00028ab422240_P001 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P003 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P004 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P005 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422280 Zm00028ab422280_P006 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422280 Zm00028ab422280_P006 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422320 Zm00028ab422320_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422320 Zm00028ab422320_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422320 Zm00028ab422320_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422320 Zm00028ab422320_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab422610 Zm00028ab422610_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab422690 Zm00028ab422690_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab422690 Zm00028ab422690_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P001 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P002 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P002 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P003 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P003 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P003 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P004 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P004 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P004 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P005 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P005 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00028ab422760 Zm00028ab422760_P005 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab422800 Zm00028ab422800_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00028ab422870 Zm00028ab422870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00028ab422870 Zm00028ab422870_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab423110 Zm00028ab423110_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab423110 Zm00028ab423110_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P002 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P003 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00028ab423190 Zm00028ab423190_P004 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab423230 Zm00028ab423230_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab423230 Zm00028ab423230_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab423230 Zm00028ab423230_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00028ab423290 Zm00028ab423290_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab423480 Zm00028ab423480_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab423480 Zm00028ab423480_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab423480 Zm00028ab423480_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab423480 Zm00028ab423480_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab423480 Zm00028ab423480_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab423480 Zm00028ab423480_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab423480 Zm00028ab423480_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab423480 Zm00028ab423480_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00028ab423480 Zm00028ab423480_P005 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00028ab423480 Zm00028ab423480_P005 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab423560 Zm00028ab423560_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab423560 Zm00028ab423560_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab423560 Zm00028ab423560_P004 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab423560 Zm00028ab423560_P005 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00028ab423560 Zm00028ab423560_P006 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00028ab423630 Zm00028ab423630_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab423680 Zm00028ab423680_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab423780 Zm00028ab423780_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab423790 Zm00028ab423790_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00028ab423790 Zm00028ab423790_P001 expected PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab423870 Zm00028ab423870_P001 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab423870 Zm00028ab423870_P002 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab423870 Zm00028ab423870_P003 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00028ab423870 Zm00028ab423870_P004 viridiplantae PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00028ab423910 Zm00028ab423910_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00028ab423920 Zm00028ab423920_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00028ab423930 Zm00028ab423930_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00028ab423940 Zm00028ab423940_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00028ab423950 Zm00028ab423950_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab423960 Zm00028ab423960_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab423960 Zm00028ab423960_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00028ab423960 Zm00028ab423960_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424040 Zm00028ab424040_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424040 Zm00028ab424040_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424040 Zm00028ab424040_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424040 Zm00028ab424040_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424040 Zm00028ab424040_P005 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab424100 Zm00028ab424100_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00028ab424100 Zm00028ab424100_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab424110 Zm00028ab424110_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab424110 Zm00028ab424110_P002 conditional PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00028ab424170 Zm00028ab424170_P001 ubiquitous PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00028ab424210 Zm00028ab424210_P001 ubiquitous PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab424310 Zm00028ab424310_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab424310 Zm00028ab424310_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab424310 Zm00028ab424310_P003 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00028ab424320 Zm00028ab424320_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab424390 Zm00028ab424390_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00028ab424400 Zm00028ab424400_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab424430 Zm00028ab424430_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00028ab424440 Zm00028ab424440_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab424640 Zm00028ab424640_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab424640 Zm00028ab424640_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab424640 Zm00028ab424640_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab424640 Zm00028ab424640_P002 conditional PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab424700 Zm00028ab424700_P001 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab424700 Zm00028ab424700_P002 expected PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00028ab424700 Zm00028ab424700_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424840 Zm00028ab424840_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424840 Zm00028ab424840_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424840 Zm00028ab424840_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424840 Zm00028ab424840_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab424840 Zm00028ab424840_P005 NA PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00028ab424860 Zm00028ab424860_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00028ab424860 Zm00028ab424860_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00028ab424860 Zm00028ab424860_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00028ab424860 Zm00028ab424860_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00028ab424860 Zm00028ab424860_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00028ab424860 Zm00028ab424860_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00028ab424860 Zm00028ab424860_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00028ab424860 Zm00028ab424860_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab424900 Zm00028ab424900_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab424900 Zm00028ab424900_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab424930 Zm00028ab424930_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00028ab424930 Zm00028ab424930_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00028ab424980 Zm00028ab424980_P002 conditional PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00028ab425210 Zm00028ab425210_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab425250 Zm00028ab425250_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00028ab425250 Zm00028ab425250_P002 ubiquitous PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab425390 Zm00028ab425390_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab425630 Zm00028ab425630_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab425630 Zm00028ab425630_P002 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab425760 Zm00028ab425760_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00028ab425760 Zm00028ab425760_P002 NA RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab425870 Zm00028ab425870_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab425930 Zm00028ab425930_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab425930 Zm00028ab425930_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00028ab425940 Zm00028ab425940_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00028ab425940 Zm00028ab425940_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00028ab426010 Zm00028ab426010_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00028ab426050 Zm00028ab426050_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00028ab426050 Zm00028ab426050_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00028ab426050 Zm00028ab426050_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00028ab426270 Zm00028ab426270_P002 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00028ab426420 Zm00028ab426420_P001 conditional PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00028ab426420 Zm00028ab426420_P001 conditional PWY-6243 bergamotene biosynthesis I RXN-8621 EC-4.2.3.81 Zm00028ab426420 Zm00028ab426420_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab426570 Zm00028ab426570_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab426610 Zm00028ab426610_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab426610 Zm00028ab426610_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab426620 Zm00028ab426620_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab426620 Zm00028ab426620_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab426680 Zm00028ab426680_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab426680 Zm00028ab426680_P002 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab426680 Zm00028ab426680_P003 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab426680 Zm00028ab426680_P003 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab426680 Zm00028ab426680_P003 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab426690 Zm00028ab426690_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00028ab426700 Zm00028ab426700_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P003 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P004 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00028ab426870 Zm00028ab426870_P004 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab426930 Zm00028ab426930_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab426930 Zm00028ab426930_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab426930 Zm00028ab426930_P003 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00028ab427060 Zm00028ab427060_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab427160 Zm00028ab427160_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00028ab427160 Zm00028ab427160_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab427430 Zm00028ab427430_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab427520 Zm00028ab427520_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab427520 Zm00028ab427520_P002 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab427530 Zm00028ab427530_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab427530 Zm00028ab427530_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab427530 Zm00028ab427530_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab427530 Zm00028ab427530_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00028ab427530 Zm00028ab427530_P001 NA PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab427990 Zm00028ab427990_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab427990 Zm00028ab427990_P002 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00028ab428130 Zm00028ab428130_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00028ab428140 Zm00028ab428140_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428180 Zm00028ab428180_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab428190 Zm00028ab428190_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab428190 Zm00028ab428190_P004 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P004 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P005 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00028ab428190 Zm00028ab428190_P006 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00028ab428190 Zm00028ab428190_P006 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00028ab428540 Zm00028ab428540_P001 expected PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab428660 Zm00028ab428660_P002 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab428660 Zm00028ab428660_P003 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab428660 Zm00028ab428660_P004 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab428660 Zm00028ab428660_P005 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab428700 Zm00028ab428700_P004 NA PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00028ab428770 Zm00028ab428770_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428830 Zm00028ab428830_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428840 Zm00028ab428840_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428840 Zm00028ab428840_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428840 Zm00028ab428840_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428870 Zm00028ab428870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428870 Zm00028ab428870_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428870 Zm00028ab428870_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428880 Zm00028ab428880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428880 Zm00028ab428880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428880 Zm00028ab428880_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428940 Zm00028ab428940_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428940 Zm00028ab428940_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428940 Zm00028ab428940_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428950 Zm00028ab428950_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428950 Zm00028ab428950_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428950 Zm00028ab428950_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab428960 Zm00028ab428960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428960 Zm00028ab428960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab428960 Zm00028ab428960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429000 Zm00028ab429000_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab429010 Zm00028ab429010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429010 Zm00028ab429010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429010 Zm00028ab429010_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab429020 Zm00028ab429020_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429020 Zm00028ab429020_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429020 Zm00028ab429020_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab429030 Zm00028ab429030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429030 Zm00028ab429030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab429030 Zm00028ab429030_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00028ab429040 Zm00028ab429040_P003 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab429180 Zm00028ab429180_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00028ab429180 Zm00028ab429180_P002 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab429210 Zm00028ab429210_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab429210 Zm00028ab429210_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00028ab429220 Zm00028ab429220_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00028ab429220 Zm00028ab429220_P001 NA SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00028ab429520 Zm00028ab429520_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P006 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P006 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P007 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00028ab429730 Zm00028ab429730_P007 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab429800 Zm00028ab429800_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab429800 Zm00028ab429800_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab429800 Zm00028ab429800_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab429890 Zm00028ab429890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab429890 Zm00028ab429890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab429890 Zm00028ab429890_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab429920 Zm00028ab429920_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab429920 Zm00028ab429920_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab429930 Zm00028ab429930_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab429940 Zm00028ab429940_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab429950 Zm00028ab429950_P001 ubiquitous PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab430020 Zm00028ab430020_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab430030 Zm00028ab430030_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab430030 Zm00028ab430030_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab430030 Zm00028ab430030_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab430030 Zm00028ab430030_P004 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00028ab430030 Zm00028ab430030_P005 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab430100 Zm00028ab430100_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00028ab430100 Zm00028ab430100_P002 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab430340 Zm00028ab430340_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab430340 Zm00028ab430340_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab430340 Zm00028ab430340_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab430360 Zm00028ab430360_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab430360 Zm00028ab430360_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab430360 Zm00028ab430360_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00028ab430360 Zm00028ab430360_P002 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430490 Zm00028ab430490_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430490 Zm00028ab430490_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430500 Zm00028ab430500_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430500 Zm00028ab430500_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430500 Zm00028ab430500_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00028ab430500 Zm00028ab430500_P004 NA ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00028ab430510 Zm00028ab430510_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00028ab430590 Zm00028ab430590_P003 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab430640 Zm00028ab430640_P001 conditional PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab430650 Zm00028ab430650_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab430650 Zm00028ab430650_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab430650 Zm00028ab430650_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab430650 Zm00028ab430650_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00028ab430650 Zm00028ab430650_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00028ab430650 Zm00028ab430650_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00028ab430650 Zm00028ab430650_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab430650 Zm00028ab430650_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00028ab430650 Zm00028ab430650_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00028ab430650 Zm00028ab430650_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00028ab430650 Zm00028ab430650_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00028ab430650 Zm00028ab430650_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab430740 Zm00028ab430740_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab430740 Zm00028ab430740_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab431050 Zm00028ab431050_P002 conditional PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab431060 Zm00028ab431060_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab431060 Zm00028ab431060_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00028ab431060 Zm00028ab431060_P001 NA PWY-4261 glycerol degradation I RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P001 viridiplantae PWY-6952 glycerophosphodiester degradation RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P001 conditional PWY-6118 glycerol-3-phosphate shuttle RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P001 expected PWY-4261 glycerol degradation I RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P002 viridiplantae PWY-6952 glycerophosphodiester degradation RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P002 conditional PWY-6118 glycerol-3-phosphate shuttle RXN-15745 EC-1.1.5.3 Zm00028ab431080 Zm00028ab431080_P002 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00028ab431170 Zm00028ab431170_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00028ab431170 Zm00028ab431170_P001 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab431240 Zm00028ab431240_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab431240 Zm00028ab431240_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab431240 Zm00028ab431240_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab431240 Zm00028ab431240_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab431240 Zm00028ab431240_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab431240 Zm00028ab431240_P003 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab431240 Zm00028ab431240_P004 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab431240 Zm00028ab431240_P004 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00028ab431240 Zm00028ab431240_P005 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab431240 Zm00028ab431240_P005 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00028ab431290 Zm00028ab431290_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00028ab431290 Zm00028ab431290_P001 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab431380 Zm00028ab431380_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab431380 Zm00028ab431380_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab431390 Zm00028ab431390_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00028ab431390 Zm00028ab431390_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab431650 Zm00028ab431650_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00028ab431760 Zm00028ab431760_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00028ab431880 Zm00028ab431880_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab431970 Zm00028ab431970_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P004 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P005 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00028ab432140 Zm00028ab432140_P006 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab432160 Zm00028ab432160_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00028ab432160 Zm00028ab432160_P002 conditional PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab432360 Zm00028ab432360_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab432360 Zm00028ab432360_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab432370 Zm00028ab432370_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab432370 Zm00028ab432370_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00028ab432370 Zm00028ab432370_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00028ab432370 Zm00028ab432370_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00028ab432400 Zm00028ab432400_P003 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab432460 Zm00028ab432460_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab432470 Zm00028ab432470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab432580 Zm00028ab432580_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00028ab432730 Zm00028ab432730_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00028ab432730 Zm00028ab432730_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab432910 Zm00028ab432910_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab432910 Zm00028ab432910_P002 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00028ab432940 Zm00028ab432940_P001 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab433220 Zm00028ab433220_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00028ab433220 Zm00028ab433220_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab433330 Zm00028ab433330_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab433330 Zm00028ab433330_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab433330 Zm00028ab433330_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00028ab433330 Zm00028ab433330_P004 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00028ab433770 Zm00028ab433770_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00028ab433850 Zm00028ab433850_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00028ab433920 Zm00028ab433920_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00028ab433920 Zm00028ab433920_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab434000 Zm00028ab434000_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab434010 Zm00028ab434010_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00028ab434050 Zm00028ab434050_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab434120 Zm00028ab434120_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434330 Zm00028ab434330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434330 Zm00028ab434330_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434330 Zm00028ab434330_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434330 Zm00028ab434330_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434330 Zm00028ab434330_P005 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00028ab434420 Zm00028ab434420_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00028ab434420 Zm00028ab434420_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00028ab434420 Zm00028ab434420_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00028ab434420 Zm00028ab434420_P001 NA PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00028ab434450 Zm00028ab434450_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab434490 Zm00028ab434490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab434490 Zm00028ab434490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab434490 Zm00028ab434490_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab434560 Zm00028ab434560_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00028ab434560 Zm00028ab434560_P001 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00028ab434740 Zm00028ab434740_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab434910 Zm00028ab434910_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab434930 Zm00028ab434930_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab435000 Zm00028ab435000_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00028ab435030 Zm00028ab435030_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435100 Zm00028ab435100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435100 Zm00028ab435100_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435130 Zm00028ab435130_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435130 Zm00028ab435130_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435130 Zm00028ab435130_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab435130 Zm00028ab435130_P004 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00028ab435520 Zm00028ab435520_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab435560 Zm00028ab435560_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab435560 Zm00028ab435560_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab435560 Zm00028ab435560_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab435570 Zm00028ab435570_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00028ab435570 Zm00028ab435570_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab435640 Zm00028ab435640_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab435640 Zm00028ab435640_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab435640 Zm00028ab435640_P003 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00028ab435640 Zm00028ab435640_P004 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00028ab435690 Zm00028ab435690_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00028ab435690 Zm00028ab435690_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00028ab435690 Zm00028ab435690_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00028ab435710 Zm00028ab435710_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00028ab435710 Zm00028ab435710_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00028ab435710 Zm00028ab435710_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab436100 Zm00028ab436100_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00028ab436100 Zm00028ab436100_P002 expected CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab436160 Zm00028ab436160_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab436240 Zm00028ab436240_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00028ab436250 Zm00028ab436250_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00028ab436320 Zm00028ab436320_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab436470 Zm00028ab436470_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00028ab436470 Zm00028ab436470_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436490 Zm00028ab436490_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436490 Zm00028ab436490_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436490 Zm00028ab436490_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436490 Zm00028ab436490_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436490 Zm00028ab436490_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab436500 Zm00028ab436500_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab436500 Zm00028ab436500_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00028ab436500 Zm00028ab436500_P003 expected PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00028ab436570 Zm00028ab436570_P001 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00028ab436570 Zm00028ab436570_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab436660 Zm00028ab436660_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab436660 Zm00028ab436660_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab436660 Zm00028ab436660_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00028ab436660 Zm00028ab436660_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab436800 Zm00028ab436800_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab436810 Zm00028ab436810_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab436810 Zm00028ab436810_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab436810 Zm00028ab436810_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab436810 Zm00028ab436810_P002 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00028ab436810 Zm00028ab436810_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00028ab436810 Zm00028ab436810_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab436830 Zm00028ab436830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab436830 Zm00028ab436830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00028ab436830 Zm00028ab436830_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00028ab436970 Zm00028ab436970_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00028ab437150 Zm00028ab437150_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab437200 Zm00028ab437200_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00028ab437240 Zm00028ab437240_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00028ab437240 Zm00028ab437240_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab437320 Zm00028ab437320_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00028ab437320 Zm00028ab437320_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00028ab437570 Zm00028ab437570_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00028ab437610 Zm00028ab437610_P001 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00028ab437610 Zm00028ab437610_P002 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00028ab437680 Zm00028ab437680_P001 expected ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00028ab437850 Zm00028ab437850_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00028ab437850 Zm00028ab437850_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab437860 Zm00028ab437860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab437860 Zm00028ab437860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab437860 Zm00028ab437860_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-7569 EC-2.1.1.329 Zm00028ab438300 Zm00028ab438300_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-7569 EC-2.1.1.329 Zm00028ab438300 Zm00028ab438300_P002 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00028ab438310 Zm00028ab438310_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00028ab438310 Zm00028ab438310_P002 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab438430 Zm00028ab438430_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab438430 Zm00028ab438430_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab438430 Zm00028ab438430_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00028ab438430 Zm00028ab438430_P004 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00028ab438470 Zm00028ab438470_P001 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438540 Zm00028ab438540_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438540 Zm00028ab438540_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438540 Zm00028ab438540_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438560 Zm00028ab438560_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438560 Zm00028ab438560_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438560 Zm00028ab438560_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00028ab438560 Zm00028ab438560_P004 conditional GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab438670 Zm00028ab438670_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab438670 Zm00028ab438670_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab438670 Zm00028ab438670_P003 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab438670 Zm00028ab438670_P004 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00028ab438670 Zm00028ab438670_P005 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab438780 Zm00028ab438780_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab438920 Zm00028ab438920_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab438920 Zm00028ab438920_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P005 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00028ab438990 Zm00028ab438990_P006 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab439250 Zm00028ab439250_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab439250 Zm00028ab439250_P002 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00028ab439460 Zm00028ab439460_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00028ab439700 Zm00028ab439700_P003 conditional GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab439840 Zm00028ab439840_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00028ab439840 Zm00028ab439840_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00028ab439880 Zm00028ab439880_P006 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab440260 Zm00028ab440260_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab440660 Zm00028ab440660_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab440660 Zm00028ab440660_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab440660 Zm00028ab440660_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00028ab440660 Zm00028ab440660_P002 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab440930 Zm00028ab440930_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab440930 Zm00028ab440930_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab440930 Zm00028ab440930_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00028ab440930 Zm00028ab440930_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab441470 Zm00028ab441470_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab441470 Zm00028ab441470_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P003 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P003 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P003 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab441470 Zm00028ab441470_P003 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P004 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P004 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P004 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00028ab441470 Zm00028ab441470_P004 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab441470 Zm00028ab441470_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab441530 Zm00028ab441530_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab441530 Zm00028ab441530_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00028ab441530 Zm00028ab441530_P003 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00028ab441560 Zm00028ab441560_P001 conditional DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab441570 Zm00028ab441570_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab441570 Zm00028ab441570_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00028ab441570 Zm00028ab441570_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab441570 Zm00028ab441570_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00028ab441570 Zm00028ab441570_P002 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab442020 Zm00028ab442020_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P003 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00028ab442020 Zm00028ab442020_P004 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00028ab442020 Zm00028ab442020_P004 manual PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab442730 Zm00028ab442730_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00028ab442730 Zm00028ab442730_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00028ab442780 Zm00028ab442780_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00028ab442870 Zm00028ab442870_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00028ab442910 Zm00028ab442910_P003 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab442940 Zm00028ab442940_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab442940 Zm00028ab442940_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab442940 Zm00028ab442940_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab442940 Zm00028ab442940_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab442940 Zm00028ab442940_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00028ab442940 Zm00028ab442940_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab442940 Zm00028ab442940_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00028ab442940 Zm00028ab442940_P002 expected PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00028ab443020 Zm00028ab443020_P001 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00028ab443130 Zm00028ab443130_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab443290 Zm00028ab443290_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab443290 Zm00028ab443290_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab443290 Zm00028ab443290_P003 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab443330 Zm00028ab443330_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00028ab443330 Zm00028ab443330_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab443450 Zm00028ab443450_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab443520 Zm00028ab443520_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab443520 Zm00028ab443520_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab443520 Zm00028ab443520_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P002 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P003 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab443650 Zm00028ab443650_P003 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00028ab443660 Zm00028ab443660_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00028ab443660 Zm00028ab443660_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab443660 Zm00028ab443660_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab443660 Zm00028ab443660_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00028ab443670 Zm00028ab443670_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00028ab443670 Zm00028ab443670_P001 conditional PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab443760 Zm00028ab443760_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00028ab443760 Zm00028ab443760_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab443770 Zm00028ab443770_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443770 Zm00028ab443770_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443770 Zm00028ab443770_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab443780 Zm00028ab443780_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00028ab443780 Zm00028ab443780_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab443780 Zm00028ab443780_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00028ab443780 Zm00028ab443780_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00028ab443780 Zm00028ab443780_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab443810 Zm00028ab443810_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443810 Zm00028ab443810_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443810 Zm00028ab443810_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00028ab443840 Zm00028ab443840_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443840 Zm00028ab443840_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00028ab443840 Zm00028ab443840_P001 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab443960 Zm00028ab443960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00028ab443960 Zm00028ab443960_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00028ab444000 Zm00028ab444000_P001 expected PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab444160 Zm00028ab444160_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab444160 Zm00028ab444160_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab444160 Zm00028ab444160_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab444160 Zm00028ab444160_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00028ab444160 Zm00028ab444160_P005 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab444200 Zm00028ab444200_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00028ab444200 Zm00028ab444200_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00028ab444300 Zm00028ab444300_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00028ab444300 Zm00028ab444300_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00028ab444300 Zm00028ab444300_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab444310 Zm00028ab444310_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab444310 Zm00028ab444310_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00028ab444310 Zm00028ab444310_P003 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab444320 Zm00028ab444320_P002 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00028ab444330 Zm00028ab444330_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab444610 Zm00028ab444610_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00028ab444610 Zm00028ab444610_P002 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00028ab444740 Zm00028ab444740_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab444750 Zm00028ab444750_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00028ab444750 Zm00028ab444750_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00028ab444790 Zm00028ab444790_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00028ab445010 Zm00028ab445010_P004 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00028ab445070 Zm00028ab445070_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00028ab445070 Zm00028ab445070_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P002 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P003 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P003 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P003 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P004 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P004 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P004 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P004 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P005 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P005 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P005 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P005 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P005 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P006 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P006 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P006 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P006 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00028ab445090 Zm00028ab445090_P006 expected PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00028ab445110 Zm00028ab445110_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00028ab445110 Zm00028ab445110_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab445160 Zm00028ab445160_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00028ab445160 Zm00028ab445160_P002 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab445370 Zm00028ab445370_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00028ab445370 Zm00028ab445370_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P002 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P003 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P003 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00028ab445560 Zm00028ab445560_P003 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00028ab445640 Zm00028ab445640_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab445710 Zm00028ab445710_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00028ab445720 Zm00028ab445720_P001 conditional PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00028ab445740 Zm00028ab445740_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00028ab445740 Zm00028ab445740_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00028ab445740 Zm00028ab445740_P003 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab445800 Zm00028ab445800_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab445800 Zm00028ab445800_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab445820 Zm00028ab445820_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab445820 Zm00028ab445820_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab445820 Zm00028ab445820_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00028ab445820 Zm00028ab445820_P004 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab445840 Zm00028ab445840_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab445840 Zm00028ab445840_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab445840 Zm00028ab445840_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00028ab445840 Zm00028ab445840_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab445900 Zm00028ab445900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab445900 Zm00028ab445900_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab446000 Zm00028ab446000_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00028ab446000 Zm00028ab446000_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab446050 Zm00028ab446050_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab446050 Zm00028ab446050_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab446050 Zm00028ab446050_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00028ab446050 Zm00028ab446050_P004 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROTATE-DEHYDROGENASE-RXN EC-1.3.5.2 Zm00028ab446080 Zm00028ab446080_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00028ab446140 Zm00028ab446140_P002 viridiplantae PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00028ab446270 Zm00028ab446270_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00028ab446270 Zm00028ab446270_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00028ab446390 Zm00028ab446390_P001 NA PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00028ab446580 Zm00028ab446580_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00028ab446600 Zm00028ab446600_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab446650 Zm00028ab446650_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab446770 Zm00028ab446770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab446770 Zm00028ab446770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab446770 Zm00028ab446770_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00028ab446780 Zm00028ab446780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab446780 Zm00028ab446780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00028ab446780 Zm00028ab446780_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis GMP-SYN-GLUT-RXN EC-6.3.5.2 Zm00028ab446800 Zm00028ab446800_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00028ab446970 Zm00028ab446970_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00028ab447560 Zm00028ab447560_P001 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab448080 Zm00028ab448080_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00028ab448090 Zm00028ab448090_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00028ab448110 Zm00028ab448110_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab448190 Zm00028ab448190_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00028ab448210 Zm00028ab448210_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00028ab448790 Zm00028ab448790_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab448800 Zm00028ab448800_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab448810 Zm00028ab448810_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00028ab448820 Zm00028ab448820_P001 viridiplantae PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab449090 Zm00028ab449090_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab449090 Zm00028ab449090_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab449100 Zm00028ab449100_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab449100 Zm00028ab449100_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00028ab449110 Zm00028ab449110_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00028ab449110 Zm00028ab449110_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449380 Zm00028ab449380_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449380 Zm00028ab449380_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449380 Zm00028ab449380_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P002 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P002 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449390 Zm00028ab449390_P002 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab449400 Zm00028ab449400_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449410 Zm00028ab449410_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449410 Zm00028ab449410_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449410 Zm00028ab449410_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449420 Zm00028ab449420_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449420 Zm00028ab449420_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449420 Zm00028ab449420_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449430 Zm00028ab449430_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449430 Zm00028ab449430_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449430 Zm00028ab449430_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449440 Zm00028ab449440_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449440 Zm00028ab449440_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449440 Zm00028ab449440_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab449450 Zm00028ab449450_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449460 Zm00028ab449460_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449460 Zm00028ab449460_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab449460 Zm00028ab449460_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00028ab450340 Zm00028ab450340_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab450410 Zm00028ab450410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00028ab450410 Zm00028ab450410_P002 viridiplantae PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab450470 Zm00028ab450470_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab450470 Zm00028ab450470_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00028ab450470 Zm00028ab450470_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00028ab450480 Zm00028ab450480_P001 conditional