Pathway ID Description Reaction ID EC number Gene Model ID Protein ID Evidence PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab000040 Zm00039ab000040_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab000070 Zm00039ab000070_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab000070 Zm00039ab000070_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab000070 Zm00039ab000070_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab000160 Zm00039ab000160_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab000320 Zm00039ab000320_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab000420 Zm00039ab000420_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab000430 Zm00039ab000430_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab000670 Zm00039ab000670_P001 expected PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab000740 Zm00039ab000740_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab000740 Zm00039ab000740_P002 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab000740 Zm00039ab000740_P003 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab000740 Zm00039ab000740_P004 viridiplantae PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00039ab001070 Zm00039ab001070_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00039ab001070 Zm00039ab001070_P001 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) FUCOKINASE-RXN EC-2.7.1.52 Zm00039ab001070 Zm00039ab001070_P002 expected PWY-6 GDP-L-fucose biosynthesis II (from L-fucose) 2.7.7.30-RXN EC-2.7.7.30 Zm00039ab001070 Zm00039ab001070_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00039ab001120 Zm00039ab001120_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00039ab001120 Zm00039ab001120_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab001130 Zm00039ab001130_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab001150 Zm00039ab001150_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab001150 Zm00039ab001150_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab001150 Zm00039ab001150_P001 conditional PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab001190 Zm00039ab001190_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab001190 Zm00039ab001190_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab001200 Zm00039ab001200_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab001200 Zm00039ab001200_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab001230 Zm00039ab001230_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab001230 Zm00039ab001230_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab001230 Zm00039ab001230_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001260 Zm00039ab001260_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001260 Zm00039ab001260_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001280 Zm00039ab001280_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001280 Zm00039ab001280_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001280 Zm00039ab001280_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab001280 Zm00039ab001280_P004 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab001380 Zm00039ab001380_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab001390 Zm00039ab001390_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab001390 Zm00039ab001390_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab001420 Zm00039ab001420_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab001420 Zm00039ab001420_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab001420 Zm00039ab001420_P001 ubiquitous PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab001450 Zm00039ab001450_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab001450 Zm00039ab001450_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab001590 Zm00039ab001590_P002 conditional PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab001620 Zm00039ab001620_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab001660 Zm00039ab001660_P001 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab001710 Zm00039ab001710_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab001710 Zm00039ab001710_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab001710 Zm00039ab001710_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab001710 Zm00039ab001710_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab001930 Zm00039ab001930_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab002250 Zm00039ab002250_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab002360 Zm00039ab002360_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab002360 Zm00039ab002360_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab002360 Zm00039ab002360_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab002360 Zm00039ab002360_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab002360 Zm00039ab002360_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab002420 Zm00039ab002420_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab002420 Zm00039ab002420_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab002420 Zm00039ab002420_P003 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab002500 Zm00039ab002500_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab002540 Zm00039ab002540_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab002540 Zm00039ab002540_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab002570 Zm00039ab002570_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab002570 Zm00039ab002570_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab002590 Zm00039ab002590_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab002590 Zm00039ab002590_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab002590 Zm00039ab002590_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab002800 Zm00039ab002800_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab002840 Zm00039ab002840_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab002840 Zm00039ab002840_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab002840 Zm00039ab002840_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab002840 Zm00039ab002840_P004 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab002960 Zm00039ab002960_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab002960 Zm00039ab002960_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab002960 Zm00039ab002960_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab002960 Zm00039ab002960_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab002980 Zm00039ab002980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab002980 Zm00039ab002980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab002980 Zm00039ab002980_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab002990 Zm00039ab002990_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab002990 Zm00039ab002990_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab002990 Zm00039ab002990_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab003000 Zm00039ab003000_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab003000 Zm00039ab003000_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab003000 Zm00039ab003000_P001 conditional PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00039ab003050 Zm00039ab003050_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab003090 Zm00039ab003090_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab003130 Zm00039ab003130_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab003170 Zm00039ab003170_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab003170 Zm00039ab003170_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab003170 Zm00039ab003170_P001 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00039ab003420 Zm00039ab003420_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab003420 Zm00039ab003420_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00039ab003420 Zm00039ab003420_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab003420 Zm00039ab003420_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab003660 Zm00039ab003660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab003670 Zm00039ab003670_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab003680 Zm00039ab003680_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab003680 Zm00039ab003680_P002 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab003750 Zm00039ab003750_P005 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P004 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P005 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P006 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab004430 Zm00039ab004430_P007 expected THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab004440 Zm00039ab004440_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab004570 Zm00039ab004570_P003 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab004580 Zm00039ab004580_P002 NA SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00039ab004720 Zm00039ab004720_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PSERTRANSAM-RXN EC-2.6.1.52 Zm00039ab004720 Zm00039ab004720_P002 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab005040 Zm00039ab005040_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab005040 Zm00039ab005040_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab005040 Zm00039ab005040_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab005060 Zm00039ab005060_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab005080 Zm00039ab005080_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab005080 Zm00039ab005080_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab005130 Zm00039ab005130_P002 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab005160 Zm00039ab005160_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab005330 Zm00039ab005330_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab005330 Zm00039ab005330_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab005330 Zm00039ab005330_P002 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab005390 Zm00039ab005390_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab005450 Zm00039ab005450_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab005450 Zm00039ab005450_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab005450 Zm00039ab005450_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab005450 Zm00039ab005450_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab005640 Zm00039ab005640_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P005 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P005 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab005660 Zm00039ab005660_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab005680 Zm00039ab005680_P001 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P001 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P002 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P002 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P003 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P003 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P004 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P004 NA PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P005 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab005750 Zm00039ab005750_P005 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab005900 Zm00039ab005900_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00039ab006030 Zm00039ab006030_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00039ab006090 Zm00039ab006090_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00039ab006090 Zm00039ab006090_P003 ubiquitous PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab006180 Zm00039ab006180_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab006180 Zm00039ab006180_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab006180 Zm00039ab006180_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab006180 Zm00039ab006180_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab006180 Zm00039ab006180_P005 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab006280 Zm00039ab006280_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab006320 Zm00039ab006320_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab006390 Zm00039ab006390_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab006390 Zm00039ab006390_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab006390 Zm00039ab006390_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab006560 Zm00039ab006560_P001 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab006760 Zm00039ab006760_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab006760 Zm00039ab006760_P001 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab006800 Zm00039ab006800_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab006800 Zm00039ab006800_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00039ab006810 Zm00039ab006810_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00039ab006810 Zm00039ab006810_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00039ab006810 Zm00039ab006810_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00039ab006810 Zm00039ab006810_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) UROGENIIISYN-RXN EC-4.2.1.75 Zm00039ab006810 Zm00039ab006810_P005 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00039ab007010 Zm00039ab007010_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00039ab007010 Zm00039ab007010_P001 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007120 Zm00039ab007120_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab007130 Zm00039ab007130_P002 conditional PWY-5027 phylloquinol biosynthesis RXN-7568 EC-2.5.1.130 Zm00039ab007160 Zm00039ab007160_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab007500 Zm00039ab007500_P004 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab007990 Zm00039ab007990_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab008110 Zm00039ab008110_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab008410 Zm00039ab008410_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab008410 Zm00039ab008410_P001 expected PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00039ab008500 Zm00039ab008500_P001 viridiplantae PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00039ab008580 Zm00039ab008580_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab008620 Zm00039ab008620_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab008620 Zm00039ab008620_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab008620 Zm00039ab008620_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab008620 Zm00039ab008620_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab008710 Zm00039ab008710_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab008820 Zm00039ab008820_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab008820 Zm00039ab008820_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab008820 Zm00039ab008820_P003 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab008980 Zm00039ab008980_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab008980 Zm00039ab008980_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab008980 Zm00039ab008980_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab008980 Zm00039ab008980_P004 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab008980 Zm00039ab008980_P005 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00039ab009070 Zm00039ab009070_P001 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00039ab009070 Zm00039ab009070_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab009070 Zm00039ab009070_P004 expected HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00039ab009070 Zm00039ab009070_P005 expected PWY-801 homocysteine and cysteine interconversion CYSTATHIONINE-BETA-SYNTHASE-RXN EC-4.2.1.22 Zm00039ab009070 Zm00039ab009070_P005 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab009200 Zm00039ab009200_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab009200 Zm00039ab009200_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab009200 Zm00039ab009200_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab009200 Zm00039ab009200_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab009210 Zm00039ab009210_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab009240 Zm00039ab009240_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab009270 Zm00039ab009270_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab009270 Zm00039ab009270_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab009270 Zm00039ab009270_P001 conditional PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab009330 Zm00039ab009330_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab009370 Zm00039ab009370_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab009370 Zm00039ab009370_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab009370 Zm00039ab009370_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab009410 Zm00039ab009410_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab009430 Zm00039ab009430_P004 NA NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P005 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPACYLGLCNACDEACETYL-RXN EC-3.5.1.108 Zm00039ab009490 Zm00039ab009490_P006 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab009530 Zm00039ab009530_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab009530 Zm00039ab009530_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab009530 Zm00039ab009530_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab009530 Zm00039ab009530_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab009530 Zm00039ab009530_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab009530 Zm00039ab009530_P003 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab009600 Zm00039ab009600_P001 expected PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab009630 Zm00039ab009630_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab009630 Zm00039ab009630_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab009720 Zm00039ab009720_P001 conditional PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00039ab009780 Zm00039ab009780_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00039ab009780 Zm00039ab009780_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab009820 Zm00039ab009820_P004 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab009870 Zm00039ab009870_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab009870 Zm00039ab009870_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab009870 Zm00039ab009870_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab009870 Zm00039ab009870_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab010020 Zm00039ab010020_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab010030 Zm00039ab010030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab010240 Zm00039ab010240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010240 Zm00039ab010240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010240 Zm00039ab010240_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010260 Zm00039ab010260_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab010270 Zm00039ab010270_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010270 Zm00039ab010270_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010270 Zm00039ab010270_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab010370 Zm00039ab010370_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab010370 Zm00039ab010370_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab010440 Zm00039ab010440_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab010440 Zm00039ab010440_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab010440 Zm00039ab010440_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010440 Zm00039ab010440_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab010440 Zm00039ab010440_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab010440 Zm00039ab010440_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab010440 Zm00039ab010440_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab010460 Zm00039ab010460_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab010460 Zm00039ab010460_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab010460 Zm00039ab010460_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab010460 Zm00039ab010460_P002 viridiplantae PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00039ab010570 Zm00039ab010570_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab010640 Zm00039ab010640_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab010700 Zm00039ab010700_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab010720 Zm00039ab010720_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab010780 Zm00039ab010780_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab010780 Zm00039ab010780_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab010780 Zm00039ab010780_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab010780 Zm00039ab010780_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab010780 Zm00039ab010780_P005 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab010880 Zm00039ab010880_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab010880 Zm00039ab010880_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab010880 Zm00039ab010880_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab011010 Zm00039ab011010_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab011090 Zm00039ab011090_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab011100 Zm00039ab011100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab011100 Zm00039ab011100_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab011160 Zm00039ab011160_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab011160 Zm00039ab011160_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab011260 Zm00039ab011260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab011260 Zm00039ab011260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab011260 Zm00039ab011260_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab011270 Zm00039ab011270_P001 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00039ab011290 Zm00039ab011290_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00039ab011290 Zm00039ab011290_P002 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011360 Zm00039ab011360_P002 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab011390 Zm00039ab011390_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab011390 Zm00039ab011390_P002 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab011470 Zm00039ab011470_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab011470 Zm00039ab011470_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab011470 Zm00039ab011470_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab011470 Zm00039ab011470_P003 manual PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab011800 Zm00039ab011800_P001 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab011830 Zm00039ab011830_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab011880 Zm00039ab011880_P004 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab012050 Zm00039ab012050_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab012210 Zm00039ab012210_P003 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab012270 Zm00039ab012270_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P004 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P005 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab012350 Zm00039ab012350_P006 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab012360 Zm00039ab012360_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab012480 Zm00039ab012480_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab012580 Zm00039ab012580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab012580 Zm00039ab012580_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab012590 Zm00039ab012590_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab012590 Zm00039ab012590_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab012590 Zm00039ab012590_P003 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab012920 Zm00039ab012920_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab012920 Zm00039ab012920_P002 viridiplantae PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab012930 Zm00039ab012930_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab012930 Zm00039ab012930_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab012930 Zm00039ab012930_P003 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab013030 Zm00039ab013030_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab013030 Zm00039ab013030_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) GLUTAMATE-N-ACETYLTRANSFERASE-RXN EC-2.3.1.35 Zm00039ab013030 Zm00039ab013030_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab013360 Zm00039ab013360_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00039ab013370 Zm00039ab013370_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00039ab013370 Zm00039ab013370_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab013460 Zm00039ab013460_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab013460 Zm00039ab013460_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab013490 Zm00039ab013490_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab013490 Zm00039ab013490_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab013490 Zm00039ab013490_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab013570 Zm00039ab013570_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab013630 Zm00039ab013630_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab013680 Zm00039ab013680_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab013700 Zm00039ab013700_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab013710 Zm00039ab013710_P001 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P002 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P003 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P003 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P003 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P003 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P004 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P004 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P004 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab013770 Zm00039ab013770_P004 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P004 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P004 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P004 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab013830 Zm00039ab013830_P004 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab013860 Zm00039ab013860_P001 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P003 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P004 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab013960 Zm00039ab013960_P004 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00039ab013990 Zm00039ab013990_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 3.1.3.46-RXN EC-3.1.3.46 Zm00039ab013990 Zm00039ab013990_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab014250 Zm00039ab014250_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab014250 Zm00039ab014250_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00039ab014380 Zm00039ab014380_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00039ab014420 Zm00039ab014420_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00039ab014420 Zm00039ab014420_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab014430 Zm00039ab014430_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab014550 Zm00039ab014550_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab014550 Zm00039ab014550_P002 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab014590 Zm00039ab014590_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab014590 Zm00039ab014590_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab014590 Zm00039ab014590_P003 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab014820 Zm00039ab014820_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab014820 Zm00039ab014820_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab014900 Zm00039ab014900_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab014990 Zm00039ab014990_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab014990 Zm00039ab014990_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab015000 Zm00039ab015000_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab015000 Zm00039ab015000_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab015020 Zm00039ab015020_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab015020 Zm00039ab015020_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab015020 Zm00039ab015020_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab015020 Zm00039ab015020_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab015020 Zm00039ab015020_P005 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab015430 Zm00039ab015430_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab015430 Zm00039ab015430_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab015470 Zm00039ab015470_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab015470 Zm00039ab015470_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab015470 Zm00039ab015470_P003 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00039ab015510 Zm00039ab015510_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab015530 Zm00039ab015530_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab015690 Zm00039ab015690_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab015890 Zm00039ab015890_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab016100 Zm00039ab016100_P002 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab016150 Zm00039ab016150_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab016150 Zm00039ab016150_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab016150 Zm00039ab016150_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab016170 Zm00039ab016170_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab016170 Zm00039ab016170_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab016170 Zm00039ab016170_P003 expected GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P005 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P005 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab016180 Zm00039ab016180_P005 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab016270 Zm00039ab016270_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab016270 Zm00039ab016270_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab016280 Zm00039ab016280_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab016280 Zm00039ab016280_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab016280 Zm00039ab016280_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab016280 Zm00039ab016280_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab016610 Zm00039ab016610_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab016610 Zm00039ab016610_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab016610 Zm00039ab016610_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab016610 Zm00039ab016610_P002 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab016670 Zm00039ab016670_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab016670 Zm00039ab016670_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab016680 Zm00039ab016680_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab016680 Zm00039ab016680_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab016680 Zm00039ab016680_P001 NA DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab016690 Zm00039ab016690_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab016690 Zm00039ab016690_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab016690 Zm00039ab016690_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab016690 Zm00039ab016690_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab016710 Zm00039ab016710_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab016710 Zm00039ab016710_P002 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00039ab017180 Zm00039ab017180_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00039ab017180 Zm00039ab017180_P001 expected PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00039ab017280 Zm00039ab017280_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab017280 Zm00039ab017280_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P005 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017300 Zm00039ab017300_P005 conditional PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00039ab017410 Zm00039ab017410_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00039ab017410 Zm00039ab017410_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab017420 Zm00039ab017420_P003 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab017440 Zm00039ab017440_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab017440 Zm00039ab017440_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab017440 Zm00039ab017440_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab017440 Zm00039ab017440_P002 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab017460 Zm00039ab017460_P005 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017530 Zm00039ab017530_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017530 Zm00039ab017530_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab017620 Zm00039ab017620_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab017680 Zm00039ab017680_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab017680 Zm00039ab017680_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab017680 Zm00039ab017680_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab017680 Zm00039ab017680_P002 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00039ab017710 Zm00039ab017710_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15775 EC-2.1.1.314 Zm00039ab017710 Zm00039ab017710_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017800 Zm00039ab017800_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017810 Zm00039ab017810_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab017810 Zm00039ab017810_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab017980 Zm00039ab017980_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017990 Zm00039ab017990_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab017990 Zm00039ab017990_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab018030 Zm00039ab018030_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab018390 Zm00039ab018390_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab018390 Zm00039ab018390_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab018390 Zm00039ab018390_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab018400 Zm00039ab018400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab018400 Zm00039ab018400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab018400 Zm00039ab018400_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P004 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P005 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab018720 Zm00039ab018720_P005 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab018810 Zm00039ab018810_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab018810 Zm00039ab018810_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00039ab018810 Zm00039ab018810_P002 NA PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab018950 Zm00039ab018950_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab019010 Zm00039ab019010_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab019010 Zm00039ab019010_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab019010 Zm00039ab019010_P001 conditional PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab019050 Zm00039ab019050_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab019140 Zm00039ab019140_P001 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab019270 Zm00039ab019270_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab019330 Zm00039ab019330_P009 ubiquitous GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab019340 Zm00039ab019340_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab019340 Zm00039ab019340_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab019340 Zm00039ab019340_P001 manual PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab019440 Zm00039ab019440_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab019450 Zm00039ab019450_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab019450 Zm00039ab019450_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab019450 Zm00039ab019450_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab019600 Zm00039ab019600_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab019680 Zm00039ab019680_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab019680 Zm00039ab019680_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab019680 Zm00039ab019680_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab019830 Zm00039ab019830_P001 expected PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00039ab020350 Zm00039ab020350_P001 ubiquitous PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00039ab020350 Zm00039ab020350_P002 ubiquitous PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab020380 Zm00039ab020380_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab020380 Zm00039ab020380_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab020380 Zm00039ab020380_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab020380 Zm00039ab020380_P004 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab020420 Zm00039ab020420_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab020420 Zm00039ab020420_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab020420 Zm00039ab020420_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab020420 Zm00039ab020420_P004 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00039ab020640 Zm00039ab020640_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00039ab020640 Zm00039ab020640_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00039ab020640 Zm00039ab020640_P003 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab020660 Zm00039ab020660_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab020660 Zm00039ab020660_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab020660 Zm00039ab020660_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab020780 Zm00039ab020780_P006 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00039ab021070 Zm00039ab021070_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab021180 Zm00039ab021180_P002 conditional PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00039ab021230 Zm00039ab021230_P001 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00039ab021350 Zm00039ab021350_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab021350 Zm00039ab021350_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00039ab021350 Zm00039ab021350_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab021350 Zm00039ab021350_P001 ubiquitous PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab021480 Zm00039ab021480_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab021480 Zm00039ab021480_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab021480 Zm00039ab021480_P001 conditional PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00039ab021520 Zm00039ab021520_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00039ab021520 Zm00039ab021520_P001 NA PWY-4041 γ-glutamyl cycle 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00039ab021520 Zm00039ab021520_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) 5-OXOPROLINASE-ATP-HYDROLYSING-RXN EC-3.5.2.9 Zm00039ab021520 Zm00039ab021520_P002 NA PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00039ab021540 Zm00039ab021540_P001 expected PWY0-1182 trehalose degradation II (cytosolic) TREHALA-RXN EC-3.2.1.28 Zm00039ab021540 Zm00039ab021540_P002 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab021760 Zm00039ab021760_P002 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021840 Zm00039ab021840_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021860 Zm00039ab021860_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021860 Zm00039ab021860_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021860 Zm00039ab021860_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021870 Zm00039ab021870_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021870 Zm00039ab021870_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021870 Zm00039ab021870_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021880 Zm00039ab021880_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021880 Zm00039ab021880_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021880 Zm00039ab021880_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021890 Zm00039ab021890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021890 Zm00039ab021890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021890 Zm00039ab021890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021900 Zm00039ab021900_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021900 Zm00039ab021900_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021900 Zm00039ab021900_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021920 Zm00039ab021920_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab021940 Zm00039ab021940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab021940 Zm00039ab021940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab021940 Zm00039ab021940_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022010 Zm00039ab022010_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022020 Zm00039ab022020_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022020 Zm00039ab022020_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022020 Zm00039ab022020_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022030 Zm00039ab022030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022030 Zm00039ab022030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022030 Zm00039ab022030_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab022050 Zm00039ab022050_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab022050 Zm00039ab022050_P002 expected PWY-7861 L-pipecolate biosynthesis RXN-8166 EC-1.5.1.1 Zm00039ab022150 Zm00039ab022150_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P002 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P003 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P003 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab022290 Zm00039ab022290_P003 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab022300 Zm00039ab022300_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab022310 Zm00039ab022310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab022310 Zm00039ab022310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab022310 Zm00039ab022310_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab022370 Zm00039ab022370_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab022370 Zm00039ab022370_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab022480 Zm00039ab022480_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab022560 Zm00039ab022560_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab022740 Zm00039ab022740_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022760 Zm00039ab022760_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022760 Zm00039ab022760_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022760 Zm00039ab022760_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022790 Zm00039ab022790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022790 Zm00039ab022790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022790 Zm00039ab022790_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab022810 Zm00039ab022810_P005 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab022910 Zm00039ab022910_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab023180 Zm00039ab023180_P002 conditional VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P004 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P005 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P005 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab023240 Zm00039ab023240_P005 viridiplantae PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P001 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P002 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P003 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab023310 Zm00039ab023310_P003 expected PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab023390 Zm00039ab023390_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab023390 Zm00039ab023390_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P005 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P005 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P005 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P005 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P006 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P006 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P006 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P006 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P006 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P007 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P007 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P007 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P007 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab023390 Zm00039ab023390_P007 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab023420 Zm00039ab023420_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab023990 Zm00039ab023990_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab023990 Zm00039ab023990_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab024040 Zm00039ab024040_P003 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab024150 Zm00039ab024150_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab024150 Zm00039ab024150_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab024150 Zm00039ab024150_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab024150 Zm00039ab024150_P002 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab024180 Zm00039ab024180_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab024180 Zm00039ab024180_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab024270 Zm00039ab024270_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab024310 Zm00039ab024310_P004 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab024500 Zm00039ab024500_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab024500 Zm00039ab024500_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab024500 Zm00039ab024500_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab024500 Zm00039ab024500_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab024840 Zm00039ab024840_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab024920 Zm00039ab024920_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab024920 Zm00039ab024920_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab024920 Zm00039ab024920_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab024990 Zm00039ab024990_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab024990 Zm00039ab024990_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab024990 Zm00039ab024990_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab024990 Zm00039ab024990_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab024990 Zm00039ab024990_P005 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab025170 Zm00039ab025170_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab025190 Zm00039ab025190_P001 expected PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab025270 Zm00039ab025270_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab025270 Zm00039ab025270_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab025270 Zm00039ab025270_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab025340 Zm00039ab025340_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab025350 Zm00039ab025350_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab025380 Zm00039ab025380_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab025520 Zm00039ab025520_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab025520 Zm00039ab025520_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab025520 Zm00039ab025520_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab025520 Zm00039ab025520_P004 ubiquitous PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab025570 Zm00039ab025570_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab025570 Zm00039ab025570_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab025570 Zm00039ab025570_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab025570 Zm00039ab025570_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab025830 Zm00039ab025830_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab025830 Zm00039ab025830_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab025830 Zm00039ab025830_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab025830 Zm00039ab025830_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab025830 Zm00039ab025830_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab025830 Zm00039ab025830_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab025850 Zm00039ab025850_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab025850 Zm00039ab025850_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab025850 Zm00039ab025850_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab025870 Zm00039ab025870_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab025870 Zm00039ab025870_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab025920 Zm00039ab025920_P002 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P003 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P004 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P005 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) GLUCURONOKINASE-RXN EC-2.7.1.43 Zm00039ab025980 Zm00039ab025980_P006 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab026120 Zm00039ab026120_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab026120 Zm00039ab026120_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab026250 Zm00039ab026250_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab026250 Zm00039ab026250_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab026250 Zm00039ab026250_P001 NA GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab026260 Zm00039ab026260_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab026260 Zm00039ab026260_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab026260 Zm00039ab026260_P001 manual PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab026310 Zm00039ab026310_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab026310 Zm00039ab026310_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab026310 Zm00039ab026310_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab026410 Zm00039ab026410_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab026410 Zm00039ab026410_P002 expected PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00039ab026460 Zm00039ab026460_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00039ab026460 Zm00039ab026460_P001 conditional PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab026470 Zm00039ab026470_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab026470 Zm00039ab026470_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab026470 Zm00039ab026470_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab026470 Zm00039ab026470_P001 viridiplantae PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00039ab026480 Zm00039ab026480_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00039ab026480 Zm00039ab026480_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00039ab026490 Zm00039ab026490_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00039ab026490 Zm00039ab026490_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab027090 Zm00039ab027090_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab027200 Zm00039ab027200_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab027200 Zm00039ab027200_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab027200 Zm00039ab027200_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027250 Zm00039ab027250_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab027260 Zm00039ab027260_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab027470 Zm00039ab027470_P002 conditional PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab027620 Zm00039ab027620_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab027620 Zm00039ab027620_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab027620 Zm00039ab027620_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab027620 Zm00039ab027620_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab027620 Zm00039ab027620_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab027620 Zm00039ab027620_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab027620 Zm00039ab027620_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab027620 Zm00039ab027620_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab027900 Zm00039ab027900_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab027900 Zm00039ab027900_P001 ubiquitous CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab027980 Zm00039ab027980_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab027980 Zm00039ab027980_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab028030 Zm00039ab028030_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab028150 Zm00039ab028150_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab028150 Zm00039ab028150_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab028260 Zm00039ab028260_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab028260 Zm00039ab028260_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab028350 Zm00039ab028350_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab028350 Zm00039ab028350_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNPOXI-RXN EC-1.4.3.5 Zm00039ab028430 Zm00039ab028430_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNPOXI-RXN EC-1.4.3.5 Zm00039ab028430 Zm00039ab028430_P001 expected PWY-6938 NADH repair RXN-12752 EC-5.1.99.6 Zm00039ab028430 Zm00039ab028430_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00039ab028480 Zm00039ab028480_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00039ab028480 Zm00039ab028480_P001 conditional PWY-5098 chlorophyll a degradation I RXN-7741 EC-1.3.7.12 Zm00039ab028580 Zm00039ab028580_P001 expected PWY-6927 chlorophyll a degradation II RXN-7741 EC-1.3.7.12 Zm00039ab028580 Zm00039ab028580_P001 expected PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab028650 Zm00039ab028650_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab028650 Zm00039ab028650_P001 conditional ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab028720 Zm00039ab028720_P003 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab028970 Zm00039ab028970_P001 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab029260 Zm00039ab029260_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab029260 Zm00039ab029260_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab029260 Zm00039ab029260_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab029260 Zm00039ab029260_P004 viridiplantae PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab029510 Zm00039ab029510_P001 ubiquitous PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab029520 Zm00039ab029520_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab029520 Zm00039ab029520_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab029520 Zm00039ab029520_P001 NA PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00039ab029580 Zm00039ab029580_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00039ab029580 Zm00039ab029580_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab029670 Zm00039ab029670_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab029690 Zm00039ab029690_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab029810 Zm00039ab029810_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab029810 Zm00039ab029810_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab029810 Zm00039ab029810_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab029840 Zm00039ab029840_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab029920 Zm00039ab029920_P001 conditional ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab030140 Zm00039ab030140_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab030140 Zm00039ab030140_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab030140 Zm00039ab030140_P003 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab030140 Zm00039ab030140_P004 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab030140 Zm00039ab030140_P005 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P003 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P004 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P005 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab030160 Zm00039ab030160_P006 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab030180 Zm00039ab030180_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab030180 Zm00039ab030180_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab030350 Zm00039ab030350_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab030350 Zm00039ab030350_P002 expected PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00039ab030540 Zm00039ab030540_P001 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00039ab030540 Zm00039ab030540_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab030620 Zm00039ab030620_P001 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab030850 Zm00039ab030850_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab030850 Zm00039ab030850_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab030850 Zm00039ab030850_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab030850 Zm00039ab030850_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab030850 Zm00039ab030850_P001 excluded MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5464 EC-2.4.1.131 Zm00039ab030890 Zm00039ab030890_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5464 EC-2.4.1.131 Zm00039ab030890 Zm00039ab030890_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab030930 Zm00039ab030930_P004 ubiquitous PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab031170 Zm00039ab031170_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab031170 Zm00039ab031170_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab031220 Zm00039ab031220_P001 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab031230 Zm00039ab031230_P001 viridiplantae PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00039ab031510 Zm00039ab031510_P001 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab031520 Zm00039ab031520_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00039ab031570 Zm00039ab031570_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00039ab031570 Zm00039ab031570_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis TETRAACYLDISACC4KIN-RXN EC-2.7.1.130 Zm00039ab031570 Zm00039ab031570_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab031590 Zm00039ab031590_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab031660 Zm00039ab031660_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab031660 Zm00039ab031660_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab031660 Zm00039ab031660_P001 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00039ab031700 Zm00039ab031700_P001 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00039ab031700 Zm00039ab031700_P002 NA PWY-5692 allantoin degradation to glyoxylate II UREIDOGLYCOLATE-HYDROLASE-RXN EC-3.5.1.116 Zm00039ab031700 Zm00039ab031700_P003 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab031760 Zm00039ab031760_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab031760 Zm00039ab031760_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab031770 Zm00039ab031770_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab031770 Zm00039ab031770_P001 ubiquitous LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab032020 Zm00039ab032020_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab032020 Zm00039ab032020_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab032060 Zm00039ab032060_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab032060 Zm00039ab032060_P002 ubiquitous PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab032110 Zm00039ab032110_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab032110 Zm00039ab032110_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab032110 Zm00039ab032110_P003 conditional PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab032170 Zm00039ab032170_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab032320 Zm00039ab032320_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab032320 Zm00039ab032320_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab032320 Zm00039ab032320_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab032320 Zm00039ab032320_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab032360 Zm00039ab032360_P005 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab032360 Zm00039ab032360_P005 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab032500 Zm00039ab032500_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab032500 Zm00039ab032500_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14917 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2542 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P004 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2762 EC-2.1.1.295 Zm00039ab032550 Zm00039ab032550_P004 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab032670 Zm00039ab032670_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab032670 Zm00039ab032670_P002 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab032730 Zm00039ab032730_P001 ubiquitous PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab032750 Zm00039ab032750_P001 expected PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab033110 Zm00039ab033110_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab033160 Zm00039ab033160_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P004 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P005 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P006 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab033210 Zm00039ab033210_P006 expected PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab033240 Zm00039ab033240_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab033320 Zm00039ab033320_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab033320 Zm00039ab033320_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab033320 Zm00039ab033320_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab033320 Zm00039ab033320_P004 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab033680 Zm00039ab033680_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab033680 Zm00039ab033680_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab033680 Zm00039ab033680_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab033680 Zm00039ab033680_P004 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab033680 Zm00039ab033680_P005 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab033810 Zm00039ab033810_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab033830 Zm00039ab033830_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab033830 Zm00039ab033830_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab033860 Zm00039ab033860_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab033860 Zm00039ab033860_P002 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab033950 Zm00039ab033950_P004 NA RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab034250 Zm00039ab034250_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab034430 Zm00039ab034430_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab034430 Zm00039ab034430_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab034430 Zm00039ab034430_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab034430 Zm00039ab034430_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab035070 Zm00039ab035070_P001 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P001 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P001 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00039ab035070 Zm00039ab035070_P001 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab035070 Zm00039ab035070_P002 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P002 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P002 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00039ab035070 Zm00039ab035070_P002 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab035070 Zm00039ab035070_P003 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P003 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P003 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00039ab035070 Zm00039ab035070_P003 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P004 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab035070 Zm00039ab035070_P004 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P004 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P004 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00039ab035070 Zm00039ab035070_P004 NA PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P005 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab035070 Zm00039ab035070_P005 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab035070 Zm00039ab035070_P005 expected PWY-181 photorespiration SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P005 ubiquitous GLYSYN2-PWY glycine biosynthesis SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P005 NA PWY-8011 L-serine biosynthesis II SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.45 Zm00039ab035070 Zm00039ab035070_P005 NA PWY-8011 L-serine biosynthesis II SERINE--PYRUVATE-AMINOTRANSFERASE-RXN EC-2.6.1.51 Zm00039ab035070 Zm00039ab035070_P005 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab035280 Zm00039ab035280_P001 conditional PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00039ab035440 Zm00039ab035440_P001 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P003 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab035610 Zm00039ab035610_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab035650 Zm00039ab035650_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab035860 Zm00039ab035860_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab035940 Zm00039ab035940_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab036050 Zm00039ab036050_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab036050 Zm00039ab036050_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab036050 Zm00039ab036050_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab036050 Zm00039ab036050_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab036410 Zm00039ab036410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab036410 Zm00039ab036410_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab036650 Zm00039ab036650_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab036660 Zm00039ab036660_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab036810 Zm00039ab036810_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab036930 Zm00039ab036930_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab036930 Zm00039ab036930_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab036930 Zm00039ab036930_P003 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab036980 Zm00039ab036980_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab036980 Zm00039ab036980_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab036980 Zm00039ab036980_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab036980 Zm00039ab036980_P001 expected PWY-5326 sulfite oxidation IV SULFITE-OXIDASE-RXN EC-1.8.3.1 Zm00039ab037020 Zm00039ab037020_P001 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab037080 Zm00039ab037080_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab037080 Zm00039ab037080_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab037080 Zm00039ab037080_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab037080 Zm00039ab037080_P004 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab037140 Zm00039ab037140_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P005 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P006 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P007 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab037290 Zm00039ab037290_P008 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab037310 Zm00039ab037310_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab037320 Zm00039ab037320_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab037320 Zm00039ab037320_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab037320 Zm00039ab037320_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab037320 Zm00039ab037320_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab037540 Zm00039ab037540_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab037670 Zm00039ab037670_P001 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab037670 Zm00039ab037670_P001 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab037670 Zm00039ab037670_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab037670 Zm00039ab037670_P002 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab037670 Zm00039ab037670_P004 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab037670 Zm00039ab037670_P004 expected SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab037670 Zm00039ab037670_P005 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab037670 Zm00039ab037670_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab037770 Zm00039ab037770_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab037780 Zm00039ab037780_P001 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab037820 Zm00039ab037820_P001 excluded PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00039ab037840 Zm00039ab037840_P003 conditional PWY-4101 D-sorbitol degradation I RXN-7644 EC-1.1.1.14 Zm00039ab037840 Zm00039ab037840_P004 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab038040 Zm00039ab038040_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab038040 Zm00039ab038040_P002 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab038040 Zm00039ab038040_P003 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab038040 Zm00039ab038040_P004 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab038180 Zm00039ab038180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab038180 Zm00039ab038180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab038180 Zm00039ab038180_P001 conditional PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab038190 Zm00039ab038190_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab038190 Zm00039ab038190_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab038190 Zm00039ab038190_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab038230 Zm00039ab038230_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab038230 Zm00039ab038230_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab038240 Zm00039ab038240_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab038240 Zm00039ab038240_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab038240 Zm00039ab038240_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab038240 Zm00039ab038240_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab038250 Zm00039ab038250_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab038250 Zm00039ab038250_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab038250 Zm00039ab038250_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab038250 Zm00039ab038250_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab038260 Zm00039ab038260_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab038260 Zm00039ab038260_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab038270 Zm00039ab038270_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab038270 Zm00039ab038270_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab038270 Zm00039ab038270_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab038270 Zm00039ab038270_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab038280 Zm00039ab038280_P002 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab038490 Zm00039ab038490_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab038490 Zm00039ab038490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab038510 Zm00039ab038510_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab038510 Zm00039ab038510_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab038510 Zm00039ab038510_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab038520 Zm00039ab038520_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab038520 Zm00039ab038520_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab038520 Zm00039ab038520_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab038560 Zm00039ab038560_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab038560 Zm00039ab038560_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab038560 Zm00039ab038560_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab038560 Zm00039ab038560_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab038560 Zm00039ab038560_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab038580 Zm00039ab038580_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038580 Zm00039ab038580_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab038580 Zm00039ab038580_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038580 Zm00039ab038580_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab038590 Zm00039ab038590_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038590 Zm00039ab038590_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab038590 Zm00039ab038590_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038590 Zm00039ab038590_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038600 Zm00039ab038600_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab038610 Zm00039ab038610_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038610 Zm00039ab038610_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab038610 Zm00039ab038610_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab038610 Zm00039ab038610_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab038750 Zm00039ab038750_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab038750 Zm00039ab038750_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab038750 Zm00039ab038750_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab038750 Zm00039ab038750_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab038750 Zm00039ab038750_P001 excluded PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab038770 Zm00039ab038770_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab038860 Zm00039ab038860_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab038920 Zm00039ab038920_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00039ab038960 Zm00039ab038960_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab038980 Zm00039ab038980_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab039000 Zm00039ab039000_P001 NA PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00039ab039020 Zm00039ab039020_P001 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00039ab039020 Zm00039ab039020_P002 expected PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00039ab039020 Zm00039ab039020_P003 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab039270 Zm00039ab039270_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab039270 Zm00039ab039270_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab039270 Zm00039ab039270_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab039270 Zm00039ab039270_P001 NA GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab039350 Zm00039ab039350_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab039350 Zm00039ab039350_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab039350 Zm00039ab039350_P001 manual PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00039ab039350 Zm00039ab039350_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00039ab039350 Zm00039ab039350_P001 manual PWY-7048 malate-oxaloacetate shuttle II MALATE-DEHYDROGENASE-NADP+-RXN EC-1.1.1.82 Zm00039ab039350 Zm00039ab039350_P001 NA DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab039410 Zm00039ab039410_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab039560 Zm00039ab039560_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab039560 Zm00039ab039560_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab039560 Zm00039ab039560_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab039560 Zm00039ab039560_P001 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P002 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab039580 Zm00039ab039580_P003 viridiplantae PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00039ab039620 Zm00039ab039620_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00039ab039620 Zm00039ab039620_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P001 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P002 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P002 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P002 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P003 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P003 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P003 expected PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P004 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P004 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab039760 Zm00039ab039760_P004 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab039770 Zm00039ab039770_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab039770 Zm00039ab039770_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab039780 Zm00039ab039780_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab039780 Zm00039ab039780_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab039790 Zm00039ab039790_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab039790 Zm00039ab039790_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab039810 Zm00039ab039810_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab039810 Zm00039ab039810_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab039830 Zm00039ab039830_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab039850 Zm00039ab039850_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab039850 Zm00039ab039850_P001 viridiplantae PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00039ab039920 Zm00039ab039920_P001 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00039ab039920 Zm00039ab039920_P002 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00039ab039920 Zm00039ab039920_P003 conditional PWY-6367 D-myo-inositol-5-phosphate metabolism RXN-10958 EC-3.1.3.95 Zm00039ab039920 Zm00039ab039920_P004 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab039950 Zm00039ab039950_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab039950 Zm00039ab039950_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab040080 Zm00039ab040080_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab040080 Zm00039ab040080_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab040080 Zm00039ab040080_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab040080 Zm00039ab040080_P002 NA PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00039ab040360 Zm00039ab040360_P001 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab040460 Zm00039ab040460_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab040460 Zm00039ab040460_P002 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab040460 Zm00039ab040460_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab040470 Zm00039ab040470_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab040470 Zm00039ab040470_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab040470 Zm00039ab040470_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab040520 Zm00039ab040520_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab040520 Zm00039ab040520_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab040590 Zm00039ab040590_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab040590 Zm00039ab040590_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab040590 Zm00039ab040590_P003 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab040890 Zm00039ab040890_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab041170 Zm00039ab041170_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab041250 Zm00039ab041250_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab041250 Zm00039ab041250_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab041250 Zm00039ab041250_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab041290 Zm00039ab041290_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab041300 Zm00039ab041300_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab041430 Zm00039ab041430_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab041440 Zm00039ab041440_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab041520 Zm00039ab041520_P001 conditional PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P001 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P001 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P001 NA PWY-762 phospholipid desaturation RXN-1726 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8294 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P002 ubiquitous PWY-5995 linoleate biosynthesis I (plants) RXN-16036 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P002 viridiplantae PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16047 EC-1.14.19.23 Zm00039ab041550 Zm00039ab041550_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab041590 Zm00039ab041590_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab041590 Zm00039ab041590_P001 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab041730 Zm00039ab041730_P003 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab041740 Zm00039ab041740_P001 expected PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab041830 Zm00039ab041830_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab041870 Zm00039ab041870_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab041870 Zm00039ab041870_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab041880 Zm00039ab041880_P001 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab041880 Zm00039ab041880_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab041880 Zm00039ab041880_P003 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab041880 Zm00039ab041880_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P004 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P005 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P006 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P006 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P006 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P007 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P007 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab041880 Zm00039ab041880_P007 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab041900 Zm00039ab041900_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab041920 Zm00039ab041920_P002 NA PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042020 Zm00039ab042020_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042020 Zm00039ab042020_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042020 Zm00039ab042020_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042020 Zm00039ab042020_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042050 Zm00039ab042050_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042050 Zm00039ab042050_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042050 Zm00039ab042050_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab042050 Zm00039ab042050_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab042220 Zm00039ab042220_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab042220 Zm00039ab042220_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab042220 Zm00039ab042220_P003 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P004 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P004 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P005 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P005 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab042260 Zm00039ab042260_P006 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab042260 Zm00039ab042260_P006 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab042320 Zm00039ab042320_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab042320 Zm00039ab042320_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab042430 Zm00039ab042430_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab042430 Zm00039ab042430_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab042830 Zm00039ab042830_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab042830 Zm00039ab042830_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab042830 Zm00039ab042830_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab042830 Zm00039ab042830_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab042930 Zm00039ab042930_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab042930 Zm00039ab042930_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab043210 Zm00039ab043210_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab043210 Zm00039ab043210_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab043210 Zm00039ab043210_P003 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P002 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P003 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P003 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P003 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P004 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P004 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P004 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P005 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P005 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab043240 Zm00039ab043240_P005 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab043450 Zm00039ab043450_P001 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab043450 Zm00039ab043450_P001 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab043450 Zm00039ab043450_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab043450 Zm00039ab043450_P001 expected PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab043480 Zm00039ab043480_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab043490 Zm00039ab043490_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab043490 Zm00039ab043490_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab043490 Zm00039ab043490_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab043490 Zm00039ab043490_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab043550 Zm00039ab043550_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab043550 Zm00039ab043550_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab043560 Zm00039ab043560_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab043560 Zm00039ab043560_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab043560 Zm00039ab043560_P003 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab043570 Zm00039ab043570_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab043570 Zm00039ab043570_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab043730 Zm00039ab043730_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab043730 Zm00039ab043730_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab043730 Zm00039ab043730_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab043750 Zm00039ab043750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab043750 Zm00039ab043750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab043750 Zm00039ab043750_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P004 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P005 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab044170 Zm00039ab044170_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab044540 Zm00039ab044540_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab044540 Zm00039ab044540_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab044540 Zm00039ab044540_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab044540 Zm00039ab044540_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab044540 Zm00039ab044540_P001 NA PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab044680 Zm00039ab044680_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab044760 Zm00039ab044760_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab044870 Zm00039ab044870_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab044870 Zm00039ab044870_P002 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab045050 Zm00039ab045050_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab045050 Zm00039ab045050_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab045050 Zm00039ab045050_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P002 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P003 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P003 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P004 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P004 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P005 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab045080 Zm00039ab045080_P005 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab045120 Zm00039ab045120_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab045170 Zm00039ab045170_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab045170 Zm00039ab045170_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab045170 Zm00039ab045170_P001 manual PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab045180 Zm00039ab045180_P003 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab045400 Zm00039ab045400_P003 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab045450 Zm00039ab045450_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P003 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P004 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P004 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P004 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P005 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P005 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab045530 Zm00039ab045530_P005 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab045620 Zm00039ab045620_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab045620 Zm00039ab045620_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab045620 Zm00039ab045620_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab045640 Zm00039ab045640_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab045640 Zm00039ab045640_P002 expected PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00039ab045770 Zm00039ab045770_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab045770 Zm00039ab045770_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00039ab045770 Zm00039ab045770_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab045770 Zm00039ab045770_P001 ubiquitous PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab046280 Zm00039ab046280_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab046280 Zm00039ab046280_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab046280 Zm00039ab046280_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab046280 Zm00039ab046280_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab046560 Zm00039ab046560_P002 NA PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P005 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P006 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P006 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P006 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P006 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P007 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P007 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P007 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab046610 Zm00039ab046610_P007 ubiquitous PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab046630 Zm00039ab046630_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab046630 Zm00039ab046630_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab046630 Zm00039ab046630_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab046630 Zm00039ab046630_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab046760 Zm00039ab046760_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab046760 Zm00039ab046760_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab046760 Zm00039ab046760_P003 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab046760 Zm00039ab046760_P004 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab046790 Zm00039ab046790_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab046840 Zm00039ab046840_P002 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab047170 Zm00039ab047170_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab047170 Zm00039ab047170_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab047200 Zm00039ab047200_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab047450 Zm00039ab047450_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab047540 Zm00039ab047540_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab047770 Zm00039ab047770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab047770 Zm00039ab047770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab047770 Zm00039ab047770_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-9291 EC-4.2.3.34 Zm00039ab047800 Zm00039ab047800_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab047840 Zm00039ab047840_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab047840 Zm00039ab047840_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab047840 Zm00039ab047840_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab047840 Zm00039ab047840_P002 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P003 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab047850 Zm00039ab047850_P004 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab048050 Zm00039ab048050_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab048050 Zm00039ab048050_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab048050 Zm00039ab048050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab048050 Zm00039ab048050_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab048050 Zm00039ab048050_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab048180 Zm00039ab048180_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab048180 Zm00039ab048180_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab048180 Zm00039ab048180_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab048300 Zm00039ab048300_P001 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab048300 Zm00039ab048300_P002 ubiquitous LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab048300 Zm00039ab048300_P003 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab048320 Zm00039ab048320_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab048410 Zm00039ab048410_P001 ubiquitous PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00039ab048420 Zm00039ab048420_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00039ab048420 Zm00039ab048420_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab048610 Zm00039ab048610_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab048620 Zm00039ab048620_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab048640 Zm00039ab048640_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab048640 Zm00039ab048640_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab048640 Zm00039ab048640_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab048690 Zm00039ab048690_P002 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab048720 Zm00039ab048720_P001 viridiplantae PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P002 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P002 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P002 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P003 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P003 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P003 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P004 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P004 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab048730 Zm00039ab048730_P004 conditional LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab048750 Zm00039ab048750_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab048750 Zm00039ab048750_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab048820 Zm00039ab048820_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab048820 Zm00039ab048820_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab048820 Zm00039ab048820_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab048860 Zm00039ab048860_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab048860 Zm00039ab048860_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab048860 Zm00039ab048860_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab048860 Zm00039ab048860_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P006 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab048940 Zm00039ab048940_P007 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab049000 Zm00039ab049000_P003 viridiplantae PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab049160 Zm00039ab049160_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab049160 Zm00039ab049160_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab049190 Zm00039ab049190_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab049190 Zm00039ab049190_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab049200 Zm00039ab049200_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab049200 Zm00039ab049200_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab049310 Zm00039ab049310_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab049310 Zm00039ab049310_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab049310 Zm00039ab049310_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab049310 Zm00039ab049310_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab049420 Zm00039ab049420_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab049420 Zm00039ab049420_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab049500 Zm00039ab049500_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00039ab049860 Zm00039ab049860_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00039ab049860 Zm00039ab049860_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00039ab049860 Zm00039ab049860_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab049950 Zm00039ab049950_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab049950 Zm00039ab049950_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab049960 Zm00039ab049960_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab049960 Zm00039ab049960_P001 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab050160 Zm00039ab050160_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab050160 Zm00039ab050160_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab050160 Zm00039ab050160_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab050160 Zm00039ab050160_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab050160 Zm00039ab050160_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab050470 Zm00039ab050470_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab050470 Zm00039ab050470_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab050470 Zm00039ab050470_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab050510 Zm00039ab050510_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab050550 Zm00039ab050550_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab050550 Zm00039ab050550_P002 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab050560 Zm00039ab050560_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab050560 Zm00039ab050560_P002 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab050860 Zm00039ab050860_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab050880 Zm00039ab050880_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab050880 Zm00039ab050880_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab050880 Zm00039ab050880_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab050880 Zm00039ab050880_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 ubiquitous PWY-3341 L-proline biosynthesis III ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II ORNITHINE-GLU-AMINOTRANSFERASE-RXN EC-2.6.1.13 Zm00039ab050930 Zm00039ab050930_P002 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab051160 Zm00039ab051160_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab051160 Zm00039ab051160_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab051160 Zm00039ab051160_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab051160 Zm00039ab051160_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab051180 Zm00039ab051180_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab051180 Zm00039ab051180_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab051180 Zm00039ab051180_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab051180 Zm00039ab051180_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab051460 Zm00039ab051460_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab051520 Zm00039ab051520_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab051520 Zm00039ab051520_P002 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab051850 Zm00039ab051850_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab051850 Zm00039ab051850_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab051850 Zm00039ab051850_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab051850 Zm00039ab051850_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLGLUTPREDUCT-RXN EC-1.2.1.38 Zm00039ab051860 Zm00039ab051860_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab051970 Zm00039ab051970_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab052180 Zm00039ab052180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab052180 Zm00039ab052180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab052180 Zm00039ab052180_P001 conditional PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00039ab052260 Zm00039ab052260_P001 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00039ab052260 Zm00039ab052260_P002 viridiplantae PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis PYRIMSYN1-RXN EC-4.1.99.17 Zm00039ab052260 Zm00039ab052260_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab052290 Zm00039ab052290_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab052430 Zm00039ab052430_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab052430 Zm00039ab052430_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab052430 Zm00039ab052430_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab052440 Zm00039ab052440_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab052440 Zm00039ab052440_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab052440 Zm00039ab052440_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab052440 Zm00039ab052440_P001 viridiplantae PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DUTP-PYROP-RXN EC-3.6.1.23 Zm00039ab052550 Zm00039ab052550_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DUTP-PYROP-RXN EC-3.6.1.23 Zm00039ab052550 Zm00039ab052550_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DUTP-PYROP-RXN EC-3.6.1.23 Zm00039ab052550 Zm00039ab052550_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DUTP-PYROP-RXN EC-3.6.1.23 Zm00039ab052550 Zm00039ab052550_P001 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab052950 Zm00039ab052950_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P002 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P003 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P003 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P004 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P004 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P005 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P005 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P006 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P006 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P006 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P007 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P007 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab053100 Zm00039ab053100_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab053230 Zm00039ab053230_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab053230 Zm00039ab053230_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab053240 Zm00039ab053240_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab053240 Zm00039ab053240_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab053260 Zm00039ab053260_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab053260 Zm00039ab053260_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab053260 Zm00039ab053260_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab053260 Zm00039ab053260_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab053260 Zm00039ab053260_P001 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab053380 Zm00039ab053380_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18762 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-4606 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-1443 EC-2.8.2.24 Zm00039ab053400 Zm00039ab053400_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4331 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4330 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4329 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2209 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4332 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4333 EC-2.8.2.38 Zm00039ab053400 Zm00039ab053400_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab053590 Zm00039ab053590_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab053630 Zm00039ab053630_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab053700 Zm00039ab053700_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab053700 Zm00039ab053700_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab053700 Zm00039ab053700_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab053700 Zm00039ab053700_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab053700 Zm00039ab053700_P003 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab053700 Zm00039ab053700_P003 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab053700 Zm00039ab053700_P004 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab053700 Zm00039ab053700_P004 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab053790 Zm00039ab053790_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab053790 Zm00039ab053790_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab053790 Zm00039ab053790_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab053790 Zm00039ab053790_P004 expected GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00039ab053920 Zm00039ab053920_P001 conditional GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00039ab053920 Zm00039ab053920_P002 conditional PWY-1782 superpathway of indole-3-acetate conjugate biosynthesis 2.4.1.121-RXN EC-2.4.1.121 Zm00039ab054110 Zm00039ab054110_P001 NA PWY-1741 indole-3-acetate inactivation IX 2.4.1.121-RXN EC-2.4.1.121 Zm00039ab054110 Zm00039ab054110_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab054380 Zm00039ab054380_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab054380 Zm00039ab054380_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab054470 Zm00039ab054470_P001 NA PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab054490 Zm00039ab054490_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab054490 Zm00039ab054490_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00039ab054500 Zm00039ab054500_P001 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054530 Zm00039ab054530_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab054540 Zm00039ab054540_P003 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab054570 Zm00039ab054570_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab054570 Zm00039ab054570_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab054570 Zm00039ab054570_P003 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab054610 Zm00039ab054610_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab054610 Zm00039ab054610_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab054610 Zm00039ab054610_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054660 Zm00039ab054660_P005 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054720 Zm00039ab054720_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054720 Zm00039ab054720_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054720 Zm00039ab054720_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054730 Zm00039ab054730_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054730 Zm00039ab054730_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054730 Zm00039ab054730_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054740 Zm00039ab054740_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054740 Zm00039ab054740_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab054740 Zm00039ab054740_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab054900 Zm00039ab054900_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab054980 Zm00039ab054980_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab054980 Zm00039ab054980_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab055000 Zm00039ab055000_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab055250 Zm00039ab055250_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab055250 Zm00039ab055250_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab055250 Zm00039ab055250_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab055450 Zm00039ab055450_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab055450 Zm00039ab055450_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab055560 Zm00039ab055560_P001 conditional PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P003 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab055570 Zm00039ab055570_P004 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab055690 Zm00039ab055690_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00039ab055730 Zm00039ab055730_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00039ab055730 Zm00039ab055730_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab055880 Zm00039ab055880_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab055880 Zm00039ab055880_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab055960 Zm00039ab055960_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab055960 Zm00039ab055960_P002 viridiplantae PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab056020 Zm00039ab056020_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab056320 Zm00039ab056320_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056320 Zm00039ab056320_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056320 Zm00039ab056320_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab056320 Zm00039ab056320_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056320 Zm00039ab056320_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056320 Zm00039ab056320_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab056440 Zm00039ab056440_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab056440 Zm00039ab056440_P001 NA PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab056600 Zm00039ab056600_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab056700 Zm00039ab056700_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-884 EC-1.17.7.4 Zm00039ab056720 Zm00039ab056720_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-884 EC-1.17.7.4 Zm00039ab056720 Zm00039ab056720_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab056830 Zm00039ab056830_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056830 Zm00039ab056830_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab056830 Zm00039ab056830_P001 NA PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P005 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P006 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab056850 Zm00039ab056850_P007 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab056880 Zm00039ab056880_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab056880 Zm00039ab056880_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab056880 Zm00039ab056880_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab056880 Zm00039ab056880_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00039ab056990 Zm00039ab056990_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-KINASE-RXN EC-2.7.1.64 Zm00039ab056990 Zm00039ab056990_P002 expected PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab057010 Zm00039ab057010_P005 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab057050 Zm00039ab057050_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab057050 Zm00039ab057050_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab057050 Zm00039ab057050_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab057050 Zm00039ab057050_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab057050 Zm00039ab057050_P001 excluded PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab057150 Zm00039ab057150_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab057150 Zm00039ab057150_P002 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab057150 Zm00039ab057150_P003 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab057150 Zm00039ab057150_P004 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab057150 Zm00039ab057150_P005 ubiquitous GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab057210 Zm00039ab057210_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab057350 Zm00039ab057350_P001 viridiplantae PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab057390 Zm00039ab057390_P002 expected PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00039ab057500 Zm00039ab057500_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab057500 Zm00039ab057500_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab057500 Zm00039ab057500_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00039ab057500 Zm00039ab057500_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00039ab057500 Zm00039ab057500_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00039ab057500 Zm00039ab057500_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab057520 Zm00039ab057520_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab057520 Zm00039ab057520_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab057520 Zm00039ab057520_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab057890 Zm00039ab057890_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab057890 Zm00039ab057890_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab057890 Zm00039ab057890_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab057890 Zm00039ab057890_P002 ubiquitous PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058230 Zm00039ab058230_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058250 Zm00039ab058250_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab058250 Zm00039ab058250_P002 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab058270 Zm00039ab058270_P001 conditional PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab058290 Zm00039ab058290_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab058290 Zm00039ab058290_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab058290 Zm00039ab058290_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab058290 Zm00039ab058290_P004 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab058290 Zm00039ab058290_P005 expected PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00039ab058320 Zm00039ab058320_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00039ab058320 Zm00039ab058320_P002 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab058510 Zm00039ab058510_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab058670 Zm00039ab058670_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058670 Zm00039ab058670_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058670 Zm00039ab058670_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab058700 Zm00039ab058700_P003 conditional PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab059050 Zm00039ab059050_P001 excluded PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab059110 Zm00039ab059110_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab059110 Zm00039ab059110_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab059130 Zm00039ab059130_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab059130 Zm00039ab059130_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab059350 Zm00039ab059350_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab059350 Zm00039ab059350_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab059350 Zm00039ab059350_P003 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab059520 Zm00039ab059520_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab059580 Zm00039ab059580_P002 NA PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab059600 Zm00039ab059600_P003 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00039ab059670 Zm00039ab059670_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab059690 Zm00039ab059690_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P002 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab059740 Zm00039ab059740_P003 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab059810 Zm00039ab059810_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab059840 Zm00039ab059840_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab059840 Zm00039ab059840_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab059840 Zm00039ab059840_P001 manual PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab060050 Zm00039ab060050_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab060050 Zm00039ab060050_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7796 EC-1.14.18.7 Zm00039ab060050 Zm00039ab060050_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060080 Zm00039ab060080_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060080 Zm00039ab060080_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060120 Zm00039ab060120_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060120 Zm00039ab060120_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060120 Zm00039ab060120_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab060120 Zm00039ab060120_P002 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab060250 Zm00039ab060250_P002 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab060320 Zm00039ab060320_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab060370 Zm00039ab060370_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab060370 Zm00039ab060370_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab060370 Zm00039ab060370_P001 conditional PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00039ab060390 Zm00039ab060390_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab060670 Zm00039ab060670_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab060680 Zm00039ab060680_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab060710 Zm00039ab060710_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab060710 Zm00039ab060710_P002 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab060720 Zm00039ab060720_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab060990 Zm00039ab060990_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab061000 Zm00039ab061000_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab061010 Zm00039ab061010_P001 conditional GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P001 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P002 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P002 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P002 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P003 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P003 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P003 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P004 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P004 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P004 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P005 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P005 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P005 expected GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P006 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P007 viridiplantae GLUTAMATE-DEG1-PWY L-glutamate degradation I GLUTAMATE-DEHYDROGENASE-RXN EC-1.4.1.2 Zm00039ab061020 Zm00039ab061020_P007 ubiquitous GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab061020 Zm00039ab061020_P007 expected PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab061280 Zm00039ab061280_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab061280 Zm00039ab061280_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab061280 Zm00039ab061280_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab061280 Zm00039ab061280_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P003 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P003 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P004 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061340 Zm00039ab061340_P004 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061350 Zm00039ab061350_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061350 Zm00039ab061350_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061350 Zm00039ab061350_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab061350 Zm00039ab061350_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab061550 Zm00039ab061550_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab061550 Zm00039ab061550_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab061600 Zm00039ab061600_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab061600 Zm00039ab061600_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab061640 Zm00039ab061640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab061640 Zm00039ab061640_P002 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab061890 Zm00039ab061890_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab061890 Zm00039ab061890_P002 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab061890 Zm00039ab061890_P003 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab061890 Zm00039ab061890_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab061910 Zm00039ab061910_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P003 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P004 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab061930 Zm00039ab061930_P004 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab062050 Zm00039ab062050_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab062260 Zm00039ab062260_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P004 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P005 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab062350 Zm00039ab062350_P006 expected PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00039ab062380 Zm00039ab062380_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab062480 Zm00039ab062480_P001 viridiplantae PWY-3841 folate transformations II 1.5.1.20-RXN EC-1.5.1.20 Zm00039ab062650 Zm00039ab062650_P001 viridiplantae PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P001 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P001 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P002 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P002 excluded PWY-4702 phytate degradation I RXN-7250 EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P003 conditional PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis 3.1.3.62-RXN EC-3.1.3.62 Zm00039ab062790 Zm00039ab062790_P003 excluded PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab062960 Zm00039ab062960_P002 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00039ab063130 Zm00039ab063130_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00039ab063130 Zm00039ab063130_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00039ab063130 Zm00039ab063130_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab063390 Zm00039ab063390_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab063390 Zm00039ab063390_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.83-RXN EC-2.4.1.83 Zm00039ab063410 Zm00039ab063410_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab063470 Zm00039ab063470_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab063470 Zm00039ab063470_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab063470 Zm00039ab063470_P003 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab063470 Zm00039ab063470_P004 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab063600 Zm00039ab063600_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab063610 Zm00039ab063610_P001 ubiquitous PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00039ab063620 Zm00039ab063620_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab063630 Zm00039ab063630_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab063720 Zm00039ab063720_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab063720 Zm00039ab063720_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab063720 Zm00039ab063720_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab063720 Zm00039ab063720_P004 expected PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab063730 Zm00039ab063730_P001 viridiplantae PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00039ab063770 Zm00039ab063770_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00039ab063770 Zm00039ab063770_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab063780 Zm00039ab063780_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab063780 Zm00039ab063780_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab063780 Zm00039ab063780_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab063780 Zm00039ab063780_P001 NA PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P001 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P001 expected PWY-3821 D-galactose detoxification GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P002 expected PWY-6527 stachyose degradation GALACTOKIN-RXN EC-2.7.1.6 Zm00039ab063790 Zm00039ab063790_P002 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab063850 Zm00039ab063850_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab063850 Zm00039ab063850_P002 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab064180 Zm00039ab064180_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab064180 Zm00039ab064180_P002 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P003 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P004 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P005 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P005 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P006 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab064240 Zm00039ab064240_P006 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P003 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P004 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab064410 Zm00039ab064410_P004 expected PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab064620 Zm00039ab064620_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P004 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P005 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab064650 Zm00039ab064650_P006 expected PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P001 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P002 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P002 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P002 NA PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P003 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P003 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab064820 Zm00039ab064820_P003 NA PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab064830 Zm00039ab064830_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab064830 Zm00039ab064830_P002 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab064920 Zm00039ab064920_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab064920 Zm00039ab064920_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab065020 Zm00039ab065020_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab065090 Zm00039ab065090_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOATE-BETA-ALANINE-LIG-RXN EC-6.3.2.1 Zm00039ab065100 Zm00039ab065100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab065130 Zm00039ab065130_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab065150 Zm00039ab065150_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab065150 Zm00039ab065150_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab065150 Zm00039ab065150_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab065150 Zm00039ab065150_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab065150 Zm00039ab065150_P006 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab065150 Zm00039ab065150_P006 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab065280 Zm00039ab065280_P001 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab065390 Zm00039ab065390_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab065600 Zm00039ab065600_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab065660 Zm00039ab065660_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab065690 Zm00039ab065690_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab065690 Zm00039ab065690_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab065690 Zm00039ab065690_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab065980 Zm00039ab065980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab065980 Zm00039ab065980_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab066040 Zm00039ab066040_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P004 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P005 viridiplantae PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P006 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab066150 Zm00039ab066150_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab066370 Zm00039ab066370_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab066370 Zm00039ab066370_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab066370 Zm00039ab066370_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab066370 Zm00039ab066370_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab066380 Zm00039ab066380_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab066490 Zm00039ab066490_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab066490 Zm00039ab066490_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab066490 Zm00039ab066490_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab066490 Zm00039ab066490_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab066590 Zm00039ab066590_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab066630 Zm00039ab066630_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab066710 Zm00039ab066710_P001 viridiplantae PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00039ab066810 Zm00039ab066810_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab066970 Zm00039ab066970_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab067000 Zm00039ab067000_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab067000 Zm00039ab067000_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab067000 Zm00039ab067000_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab067000 Zm00039ab067000_P004 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab067020 Zm00039ab067020_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab067030 Zm00039ab067030_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab067040 Zm00039ab067040_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab067050 Zm00039ab067050_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab067070 Zm00039ab067070_P001 viridiplantae PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00039ab067110 Zm00039ab067110_P001 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00039ab067110 Zm00039ab067110_P002 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00039ab067110 Zm00039ab067110_P003 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00039ab067110 Zm00039ab067110_P004 expected PWY-5107 phytol salvage pathway RXN-7683 EC-2.7.1.182 Zm00039ab067110 Zm00039ab067110_P005 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab067180 Zm00039ab067180_P002 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab067210 Zm00039ab067210_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab067210 Zm00039ab067210_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab067220 Zm00039ab067220_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab067220 Zm00039ab067220_P001 conditional PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab067270 Zm00039ab067270_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab067280 Zm00039ab067280_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab067280 Zm00039ab067280_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab067280 Zm00039ab067280_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab067280 Zm00039ab067280_P004 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067410 Zm00039ab067410_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067410 Zm00039ab067410_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab067410 Zm00039ab067410_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab067410 Zm00039ab067410_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067430 Zm00039ab067430_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067430 Zm00039ab067430_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab067430 Zm00039ab067430_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab067430 Zm00039ab067430_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab067590 Zm00039ab067590_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab067600 Zm00039ab067600_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab067610 Zm00039ab067610_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab067610 Zm00039ab067610_P002 viridiplantae PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab067760 Zm00039ab067760_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab067760 Zm00039ab067760_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab067760 Zm00039ab067760_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab067760 Zm00039ab067760_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067770 Zm00039ab067770_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab067770 Zm00039ab067770_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab067770 Zm00039ab067770_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab067770 Zm00039ab067770_P001 conditional PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab067880 Zm00039ab067880_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab068080 Zm00039ab068080_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab068080 Zm00039ab068080_P002 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab068080 Zm00039ab068080_P003 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab068080 Zm00039ab068080_P004 NA PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab068090 Zm00039ab068090_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab068090 Zm00039ab068090_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab068090 Zm00039ab068090_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab068090 Zm00039ab068090_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab068090 Zm00039ab068090_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab068090 Zm00039ab068090_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II FGAMSYN-RXN EC-6.3.5.3 Zm00039ab068150 Zm00039ab068150_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab068160 Zm00039ab068160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab068160 Zm00039ab068160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab068160 Zm00039ab068160_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00039ab068510 Zm00039ab068510_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab068540 Zm00039ab068540_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab068600 Zm00039ab068600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab068600 Zm00039ab068600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab068600 Zm00039ab068600_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab068620 Zm00039ab068620_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab068620 Zm00039ab068620_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab068680 Zm00039ab068680_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab068730 Zm00039ab068730_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab068750 Zm00039ab068750_P001 expected PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00039ab068940 Zm00039ab068940_P001 viridiplantae PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00039ab068940 Zm00039ab068940_P002 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab069130 Zm00039ab069130_P002 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab069150 Zm00039ab069150_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab069160 Zm00039ab069160_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab069160 Zm00039ab069160_P002 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab069330 Zm00039ab069330_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab069330 Zm00039ab069330_P001 NA PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00039ab069410 Zm00039ab069410_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00039ab069410 Zm00039ab069410_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00039ab069410 Zm00039ab069410_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab069680 Zm00039ab069680_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab069780 Zm00039ab069780_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab069780 Zm00039ab069780_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab069990 Zm00039ab069990_P001 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab070220 Zm00039ab070220_P001 viridiplantae PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00039ab070280 Zm00039ab070280_P001 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab070330 Zm00039ab070330_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00039ab070350 Zm00039ab070350_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVT-RXN EC-2.1.2.10 Zm00039ab070350 Zm00039ab070350_P002 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070370 Zm00039ab070370_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070370 Zm00039ab070370_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070370 Zm00039ab070370_P003 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070370 Zm00039ab070370_P004 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070380 Zm00039ab070380_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab070380 Zm00039ab070380_P002 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab070390 Zm00039ab070390_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab070400 Zm00039ab070400_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab070410 Zm00039ab070410_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab070410 Zm00039ab070410_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab070410 Zm00039ab070410_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab070560 Zm00039ab070560_P001 expected PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab070680 Zm00039ab070680_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00039ab070700 Zm00039ab070700_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00039ab070700 Zm00039ab070700_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00039ab070700 Zm00039ab070700_P003 viridiplantae HISTSYN-PWY L-histidine biosynthesis IMIDPHOSDEHYD-RXN EC-4.2.1.19 Zm00039ab070700 Zm00039ab070700_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab070940 Zm00039ab070940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab070940 Zm00039ab070940_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab070940 Zm00039ab070940_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab070940 Zm00039ab070940_P002 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab071000 Zm00039ab071000_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab071000 Zm00039ab071000_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab071000 Zm00039ab071000_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab071000 Zm00039ab071000_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab071000 Zm00039ab071000_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab071000 Zm00039ab071000_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab071000 Zm00039ab071000_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab071000 Zm00039ab071000_P002 expected PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab071040 Zm00039ab071040_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab071040 Zm00039ab071040_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab071040 Zm00039ab071040_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab071040 Zm00039ab071040_P002 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00039ab071080 Zm00039ab071080_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00039ab071080 Zm00039ab071080_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab071100 Zm00039ab071100_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab071100 Zm00039ab071100_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab071190 Zm00039ab071190_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab071190 Zm00039ab071190_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab071190 Zm00039ab071190_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab071190 Zm00039ab071190_P004 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00039ab071230 Zm00039ab071230_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00039ab071230 Zm00039ab071230_P002 ubiquitous PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00039ab071250 Zm00039ab071250_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00039ab071250 Zm00039ab071250_P001 conditional PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab071260 Zm00039ab071260_P001 viridiplantae PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00039ab071270 Zm00039ab071270_P001 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00039ab071270 Zm00039ab071270_P001 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00039ab071270 Zm00039ab071270_P002 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00039ab071270 Zm00039ab071270_P002 conditional PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00039ab071270 Zm00039ab071270_P003 conditional PWY-5829 geraniol and geranial biosynthesis RXN-8618 EC-3.1.7.11 Zm00039ab071270 Zm00039ab071270_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab071290 Zm00039ab071290_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab071290 Zm00039ab071290_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab071290 Zm00039ab071290_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00039ab071340 Zm00039ab071340_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00039ab071340 Zm00039ab071340_P001 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab071390 Zm00039ab071390_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab071430 Zm00039ab071430_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P001 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P002 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P003 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P004 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P005 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P006 conditional PWY-4 UDP-α-D-galacturonate biosynthesis II (from D-galacturonate) GALACTURONOKINASE-RXN EC-2.7.1.44 Zm00039ab071520 Zm00039ab071520_P007 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab071840 Zm00039ab071840_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab071840 Zm00039ab071840_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab071900 Zm00039ab071900_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab071900 Zm00039ab071900_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab071900 Zm00039ab071900_P001 conditional PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab071970 Zm00039ab071970_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab072090 Zm00039ab072090_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab072150 Zm00039ab072150_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab072150 Zm00039ab072150_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab072230 Zm00039ab072230_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab072230 Zm00039ab072230_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab072240 Zm00039ab072240_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab072250 Zm00039ab072250_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab072420 Zm00039ab072420_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab072420 Zm00039ab072420_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab072420 Zm00039ab072420_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab072420 Zm00039ab072420_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab072570 Zm00039ab072570_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5462 EC-2.4.1.132 Zm00039ab072840 Zm00039ab072840_P006 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5463 EC-2.4.1.257 Zm00039ab072840 Zm00039ab072840_P006 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab072980 Zm00039ab072980_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab072980 Zm00039ab072980_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab072980 Zm00039ab072980_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab072980 Zm00039ab072980_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab072980 Zm00039ab072980_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab073240 Zm00039ab073240_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab073450 Zm00039ab073450_P002 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P002 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P003 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab073660 Zm00039ab073660_P003 NA PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00039ab073760 Zm00039ab073760_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00039ab073760 Zm00039ab073760_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00039ab073760 Zm00039ab073760_P003 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab074090 Zm00039ab074090_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab074090 Zm00039ab074090_P001 excluded PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab074410 Zm00039ab074410_P001 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab074500 Zm00039ab074500_P003 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab074610 Zm00039ab074610_P001 expected PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab074630 Zm00039ab074630_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab074630 Zm00039ab074630_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab074630 Zm00039ab074630_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab074630 Zm00039ab074630_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab074630 Zm00039ab074630_P002 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab074650 Zm00039ab074650_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab074870 Zm00039ab074870_P003 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13642 EC-1.13.11.68 Zm00039ab074880 Zm00039ab074880_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13642 EC-1.13.11.68 Zm00039ab074880 Zm00039ab074880_P002 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab074940 Zm00039ab074940_P002 NA PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00039ab075040 Zm00039ab075040_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00039ab075040 Zm00039ab075040_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00039ab075040 Zm00039ab075040_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00039ab075040 Zm00039ab075040_P002 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab075070 Zm00039ab075070_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab075070 Zm00039ab075070_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab075070 Zm00039ab075070_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab075070 Zm00039ab075070_P004 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab075070 Zm00039ab075070_P005 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab075290 Zm00039ab075290_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab075290 Zm00039ab075290_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab075290 Zm00039ab075290_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab075290 Zm00039ab075290_P004 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab075340 Zm00039ab075340_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab075370 Zm00039ab075370_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab075370 Zm00039ab075370_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab075370 Zm00039ab075370_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab075780 Zm00039ab075780_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab075780 Zm00039ab075780_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab075950 Zm00039ab075950_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab075950 Zm00039ab075950_P002 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab075970 Zm00039ab075970_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00039ab076010 Zm00039ab076010_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab076210 Zm00039ab076210_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab076400 Zm00039ab076400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076400 Zm00039ab076400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076400 Zm00039ab076400_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab076420 Zm00039ab076420_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076420 Zm00039ab076420_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076420 Zm00039ab076420_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab076430 Zm00039ab076430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076430 Zm00039ab076430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076430 Zm00039ab076430_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab076450 Zm00039ab076450_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076450 Zm00039ab076450_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076450 Zm00039ab076450_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab076460 Zm00039ab076460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076460 Zm00039ab076460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab076460 Zm00039ab076460_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab076600 Zm00039ab076600_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab076600 Zm00039ab076600_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab076600 Zm00039ab076600_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab076600 Zm00039ab076600_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab076600 Zm00039ab076600_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab076680 Zm00039ab076680_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab076740 Zm00039ab076740_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab076740 Zm00039ab076740_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab076740 Zm00039ab076740_P004 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab076770 Zm00039ab076770_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab076770 Zm00039ab076770_P002 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab076940 Zm00039ab076940_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab076940 Zm00039ab076940_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab076940 Zm00039ab076940_P003 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab077110 Zm00039ab077110_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab077110 Zm00039ab077110_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P005 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P006 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P007 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab077130 Zm00039ab077130_P008 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077140 Zm00039ab077140_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077140 Zm00039ab077140_P002 viridiplantae PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab077170 Zm00039ab077170_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab077360 Zm00039ab077360_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab077410 Zm00039ab077410_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab077430 Zm00039ab077430_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab077430 Zm00039ab077430_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab077430 Zm00039ab077430_P003 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab077430 Zm00039ab077430_P004 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab077430 Zm00039ab077430_P005 expected PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab077610 Zm00039ab077610_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab077610 Zm00039ab077610_P002 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab077610 Zm00039ab077610_P003 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab077610 Zm00039ab077610_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab077870 Zm00039ab077870_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab077870 Zm00039ab077870_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab077870 Zm00039ab077870_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab077870 Zm00039ab077870_P002 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab077890 Zm00039ab077890_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab077910 Zm00039ab077910_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab077940 Zm00039ab077940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077950 Zm00039ab077950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077980 Zm00039ab077980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077980 Zm00039ab077980_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077980 Zm00039ab077980_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077980 Zm00039ab077980_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab077980 Zm00039ab077980_P005 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078010 Zm00039ab078010_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078040 Zm00039ab078040_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078040 Zm00039ab078040_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078050 Zm00039ab078050_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078050 Zm00039ab078050_P002 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078050 Zm00039ab078050_P003 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab078050 Zm00039ab078050_P004 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab078330 Zm00039ab078330_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab078330 Zm00039ab078330_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab078330 Zm00039ab078330_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab078340 Zm00039ab078340_P001 conditional PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab078370 Zm00039ab078370_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab078370 Zm00039ab078370_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab078480 Zm00039ab078480_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab078560 Zm00039ab078560_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab078560 Zm00039ab078560_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab078560 Zm00039ab078560_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00039ab078570 Zm00039ab078570_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00039ab078570 Zm00039ab078570_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00039ab078570 Zm00039ab078570_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00039ab078570 Zm00039ab078570_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5472 EC-2.4.1.256 Zm00039ab078570 Zm00039ab078570_P005 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab078730 Zm00039ab078730_P004 NA ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab078950 Zm00039ab078950_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab078950 Zm00039ab078950_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab078950 Zm00039ab078950_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab078950 Zm00039ab078950_P002 viridiplantae PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab079020 Zm00039ab079020_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab079020 Zm00039ab079020_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab079020 Zm00039ab079020_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab079020 Zm00039ab079020_P001 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab079250 Zm00039ab079250_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab079260 Zm00039ab079260_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab079260 Zm00039ab079260_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab079260 Zm00039ab079260_P003 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab079470 Zm00039ab079470_P003 viridiplantae GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P001 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P002 conditional GLYOXDEG-PWY glycolate and glyoxylate degradation II MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle MALSYN-RXN EC-2.3.3.9 Zm00039ab079680 Zm00039ab079680_P003 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab079740 Zm00039ab079740_P006 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab079750 Zm00039ab079750_P001 conditional PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab079980 Zm00039ab079980_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab079980 Zm00039ab079980_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab079980 Zm00039ab079980_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab080000 Zm00039ab080000_P001 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00039ab080350 Zm00039ab080350_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab080390 Zm00039ab080390_P001 conditional HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab080940 Zm00039ab080940_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab080980 Zm00039ab080980_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab080980 Zm00039ab080980_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab080980 Zm00039ab080980_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab081010 Zm00039ab081010_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab081010 Zm00039ab081010_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab081060 Zm00039ab081060_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab081060 Zm00039ab081060_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab081060 Zm00039ab081060_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab081230 Zm00039ab081230_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab081240 Zm00039ab081240_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00039ab081240 Zm00039ab081240_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab081240 Zm00039ab081240_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00039ab081240 Zm00039ab081240_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab081240 Zm00039ab081240_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-17809 EC-4.6.1.17 Zm00039ab081240 Zm00039ab081240_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab081340 Zm00039ab081340_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab081340 Zm00039ab081340_P001 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081380 Zm00039ab081380_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081380 Zm00039ab081380_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081380 Zm00039ab081380_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081390 Zm00039ab081390_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081390 Zm00039ab081390_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081390 Zm00039ab081390_P003 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab081410 Zm00039ab081410_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00039ab081430 Zm00039ab081430_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab081430 Zm00039ab081430_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab081430 Zm00039ab081430_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab081430 Zm00039ab081430_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00039ab081430 Zm00039ab081430_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00039ab081430 Zm00039ab081430_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00039ab081430 Zm00039ab081430_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00039ab081500 Zm00039ab081500_P001 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00039ab081500 Zm00039ab081500_P002 conditional PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00039ab081500 Zm00039ab081500_P003 conditional PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab081540 Zm00039ab081540_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab081540 Zm00039ab081540_P001 NA PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYLOSUCCINATE-SYNTHASE-RXN EC-6.3.4.4 Zm00039ab081690 Zm00039ab081690_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab081860 Zm00039ab081860_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab081860 Zm00039ab081860_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab081860 Zm00039ab081860_P001 excluded PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab082010 Zm00039ab082010_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab082010 Zm00039ab082010_P002 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082020 Zm00039ab082020_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082020 Zm00039ab082020_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082040 Zm00039ab082040_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082040 Zm00039ab082040_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082040 Zm00039ab082040_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082040 Zm00039ab082040_P004 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab082040 Zm00039ab082040_P005 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.103-RXN EC-2.3.1.103 Zm00039ab082050 Zm00039ab082050_P001 conditional PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00039ab082080 Zm00039ab082080_P001 conditional PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab082090 Zm00039ab082090_P001 expected PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab082110 Zm00039ab082110_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab082110 Zm00039ab082110_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab082110 Zm00039ab082110_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00039ab082290 Zm00039ab082290_P001 conditional PWY-5934 iron reduction and absorption FERRIC-CHELATE-REDUCTASE-RXN EC-1.16.1.7 Zm00039ab082290 Zm00039ab082290_P002 conditional PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab082500 Zm00039ab082500_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab082500 Zm00039ab082500_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab082880 Zm00039ab082880_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab082940 Zm00039ab082940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab082940 Zm00039ab082940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab082940 Zm00039ab082940_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab083000 Zm00039ab083000_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab083000 Zm00039ab083000_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab083000 Zm00039ab083000_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab083000 Zm00039ab083000_P004 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GART-RXN EC-2.1.2.2 Zm00039ab083210 Zm00039ab083210_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate GART-RXN EC-2.1.2.2 Zm00039ab083210 Zm00039ab083210_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab083380 Zm00039ab083380_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab083380 Zm00039ab083380_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab083390 Zm00039ab083390_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab083390 Zm00039ab083390_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab083390 Zm00039ab083390_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab083390 Zm00039ab083390_P004 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab083390 Zm00039ab083390_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083430 Zm00039ab083430_P006 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab083580 Zm00039ab083580_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab083610 Zm00039ab083610_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083630 Zm00039ab083630_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab083630 Zm00039ab083630_P004 NA CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab083700 Zm00039ab083700_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab083700 Zm00039ab083700_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab083850 Zm00039ab083850_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab083850 Zm00039ab083850_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab083850 Zm00039ab083850_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab083850 Zm00039ab083850_P001 NA PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab083910 Zm00039ab083910_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab083910 Zm00039ab083910_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab083910 Zm00039ab083910_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084110 Zm00039ab084110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084110 Zm00039ab084110_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab084130 Zm00039ab084130_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab084130 Zm00039ab084130_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab084220 Zm00039ab084220_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab084220 Zm00039ab084220_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab084220 Zm00039ab084220_P003 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab084320 Zm00039ab084320_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084340 Zm00039ab084340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084340 Zm00039ab084340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084360 Zm00039ab084360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab084360 Zm00039ab084360_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab084500 Zm00039ab084500_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab084500 Zm00039ab084500_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab084500 Zm00039ab084500_P003 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab084500 Zm00039ab084500_P004 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab084540 Zm00039ab084540_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P002 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P003 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab084570 Zm00039ab084570_P004 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab084700 Zm00039ab084700_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab084710 Zm00039ab084710_P001 viridiplantae PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P001 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P002 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P002 expected PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P003 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab084770 Zm00039ab084770_P003 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab085110 Zm00039ab085110_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab085150 Zm00039ab085150_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab085150 Zm00039ab085150_P002 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00039ab085500 Zm00039ab085500_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00039ab085500 Zm00039ab085500_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab085510 Zm00039ab085510_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab085510 Zm00039ab085510_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab085510 Zm00039ab085510_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab085580 Zm00039ab085580_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab085660 Zm00039ab085660_P001 viridiplantae PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P001 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P002 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P003 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P004 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P005 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P006 expected PWY-5194 siroheme biosynthesis SIROHEME-FERROCHELAT-RXN EC-4.99.1.4 Zm00039ab085670 Zm00039ab085670_P007 expected PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab085780 Zm00039ab085780_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab085780 Zm00039ab085780_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab085780 Zm00039ab085780_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab086160 Zm00039ab086160_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab086160 Zm00039ab086160_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab086160 Zm00039ab086160_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab086160 Zm00039ab086160_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab086160 Zm00039ab086160_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab086330 Zm00039ab086330_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab086330 Zm00039ab086330_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab086350 Zm00039ab086350_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab086350 Zm00039ab086350_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab086350 Zm00039ab086350_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab086380 Zm00039ab086380_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab086380 Zm00039ab086380_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab086540 Zm00039ab086540_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab086630 Zm00039ab086630_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab086630 Zm00039ab086630_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab086740 Zm00039ab086740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab086740 Zm00039ab086740_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab086770 Zm00039ab086770_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab086780 Zm00039ab086780_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab086780 Zm00039ab086780_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab087020 Zm00039ab087020_P001 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab087090 Zm00039ab087090_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab087090 Zm00039ab087090_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab087090 Zm00039ab087090_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab087090 Zm00039ab087090_P004 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab087090 Zm00039ab087090_P005 conditional PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab087100 Zm00039ab087100_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab087100 Zm00039ab087100_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab087100 Zm00039ab087100_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab087100 Zm00039ab087100_P002 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab087100 Zm00039ab087100_P003 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab087100 Zm00039ab087100_P004 expected PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00039ab087330 Zm00039ab087330_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab087460 Zm00039ab087460_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab087460 Zm00039ab087460_P001 conditional PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab087500 Zm00039ab087500_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00039ab087520 Zm00039ab087520_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab087520 Zm00039ab087520_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab087520 Zm00039ab087520_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab087580 Zm00039ab087580_P001 expected PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab088230 Zm00039ab088230_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab088240 Zm00039ab088240_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab088270 Zm00039ab088270_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab088270 Zm00039ab088270_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P002 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P002 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab089080 Zm00039ab089080_P002 NA HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab089090 Zm00039ab089090_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab089120 Zm00039ab089120_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab089120 Zm00039ab089120_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab089120 Zm00039ab089120_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab089200 Zm00039ab089200_P001 viridiplantae ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P001 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P001 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab089340 Zm00039ab089340_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab089340 Zm00039ab089340_P002 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P002 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P002 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P003 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P003 ubiquitous ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P004 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab089340 Zm00039ab089340_P004 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab089430 Zm00039ab089430_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab089430 Zm00039ab089430_P001 NA PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab089500 Zm00039ab089500_P001 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab089620 Zm00039ab089620_P001 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab089730 Zm00039ab089730_P001 NA PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab089740 Zm00039ab089740_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab089740 Zm00039ab089740_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab089740 Zm00039ab089740_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab089740 Zm00039ab089740_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab089760 Zm00039ab089760_P004 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab089880 Zm00039ab089880_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab089880 Zm00039ab089880_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab089950 Zm00039ab089950_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab090040 Zm00039ab090040_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab090040 Zm00039ab090040_P001 conditional PWY-5733 germacrene biosynthesis RXN-8553 EC-4.2.3.71 Zm00039ab090220 Zm00039ab090220_P001 conditional PWY-5733 germacrene biosynthesis RXN-8939 EC-4.2.3.77 Zm00039ab090220 Zm00039ab090220_P001 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab090270 Zm00039ab090270_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab090270 Zm00039ab090270_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab090270 Zm00039ab090270_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab090410 Zm00039ab090410_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab090410 Zm00039ab090410_P002 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab090570 Zm00039ab090570_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab090570 Zm00039ab090570_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab090620 Zm00039ab090620_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab090620 Zm00039ab090620_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab090620 Zm00039ab090620_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab090880 Zm00039ab090880_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab090880 Zm00039ab090880_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab091130 Zm00039ab091130_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab091380 Zm00039ab091380_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab091380 Zm00039ab091380_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab091750 Zm00039ab091750_P004 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab091810 Zm00039ab091810_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab091820 Zm00039ab091820_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab091820 Zm00039ab091820_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab091820 Zm00039ab091820_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab091830 Zm00039ab091830_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab091840 Zm00039ab091840_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab091840 Zm00039ab091840_P002 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab092060 Zm00039ab092060_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab092060 Zm00039ab092060_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab092060 Zm00039ab092060_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab092060 Zm00039ab092060_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab092060 Zm00039ab092060_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab092390 Zm00039ab092390_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab092390 Zm00039ab092390_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab092630 Zm00039ab092630_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab092670 Zm00039ab092670_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab092670 Zm00039ab092670_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab093160 Zm00039ab093160_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab093170 Zm00039ab093170_P001 expected PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab093300 Zm00039ab093300_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab093320 Zm00039ab093320_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab093320 Zm00039ab093320_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab093320 Zm00039ab093320_P002 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab093320 Zm00039ab093320_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab093480 Zm00039ab093480_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab093480 Zm00039ab093480_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab093480 Zm00039ab093480_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab093480 Zm00039ab093480_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab093630 Zm00039ab093630_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab093830 Zm00039ab093830_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab093890 Zm00039ab093890_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab093890 Zm00039ab093890_P001 expected PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab093900 Zm00039ab093900_P001 ubiquitous PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab093950 Zm00039ab093950_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab093950 Zm00039ab093950_P002 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab093990 Zm00039ab093990_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P003 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P003 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P004 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P004 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P004 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab094120 Zm00039ab094120_P004 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab094450 Zm00039ab094450_P002 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab094480 Zm00039ab094480_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab094480 Zm00039ab094480_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab094480 Zm00039ab094480_P003 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab094480 Zm00039ab094480_P004 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab094480 Zm00039ab094480_P005 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab094550 Zm00039ab094550_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab094550 Zm00039ab094550_P002 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab094550 Zm00039ab094550_P003 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab094710 Zm00039ab094710_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab095030 Zm00039ab095030_P001 viridiplantae PWY-5530 sorbitol biosynthesis II 1.1.99.28-RXN EC-1.1.99.28 Zm00039ab095330 Zm00039ab095330_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab095380 Zm00039ab095380_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab095390 Zm00039ab095390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab095390 Zm00039ab095390_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab095390 Zm00039ab095390_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab095400 Zm00039ab095400_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab095400 Zm00039ab095400_P001 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P001 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P002 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P002 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P003 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P003 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P003 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P004 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P004 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P004 excluded PWY3O-4107 NAD salvage pathway V (PNC V cycle) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P005 NA PWY-5381 pyridine nucleotide cycling (plants) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P005 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P005 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NAD-SYNTH-GLN-RXN EC-6.3.5.1 Zm00039ab095430 Zm00039ab095430_P005 excluded BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab095480 Zm00039ab095480_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab095480 Zm00039ab095480_P002 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab095520 Zm00039ab095520_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab095550 Zm00039ab095550_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab095550 Zm00039ab095550_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab095590 Zm00039ab095590_P001 conditional PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P004 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P005 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095710 Zm00039ab095710_P006 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095720 Zm00039ab095720_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab095720 Zm00039ab095720_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab095990 Zm00039ab095990_P001 expected PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab096040 Zm00039ab096040_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab096090 Zm00039ab096090_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab096090 Zm00039ab096090_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab096090 Zm00039ab096090_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab096100 Zm00039ab096100_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab096100 Zm00039ab096100_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab096290 Zm00039ab096290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab096290 Zm00039ab096290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab096290 Zm00039ab096290_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab096430 Zm00039ab096430_P001 NA PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab096520 Zm00039ab096520_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab096670 Zm00039ab096670_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab096670 Zm00039ab096670_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab096670 Zm00039ab096670_P003 viridiplantae PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P001 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P001 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P002 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P002 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P003 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P003 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P004 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P004 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P005 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P005 ubiquitous PWY-6599 guanine and guanosine salvage II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P006 viridiplantae PWY-6607 guanosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P006 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-366 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P006 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-363 EC-3.2.2.1 Zm00039ab096730 Zm00039ab096730_P006 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab096760 Zm00039ab096760_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab096820 Zm00039ab096820_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab096820 Zm00039ab096820_P002 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab096840 Zm00039ab096840_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P005 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P005 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P005 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P005 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P006 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P006 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P006 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab097040 Zm00039ab097040_P006 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab097280 Zm00039ab097280_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab097280 Zm00039ab097280_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab097300 Zm00039ab097300_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab097300 Zm00039ab097300_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab097300 Zm00039ab097300_P003 NA PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab097370 Zm00039ab097370_P001 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab097380 Zm00039ab097380_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab097380 Zm00039ab097380_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab097380 Zm00039ab097380_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab097380 Zm00039ab097380_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab097380 Zm00039ab097380_P005 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab097400 Zm00039ab097400_P001 conditional PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab097420 Zm00039ab097420_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab097580 Zm00039ab097580_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab097580 Zm00039ab097580_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab097620 Zm00039ab097620_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab097640 Zm00039ab097640_P004 ubiquitous PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab097660 Zm00039ab097660_P001 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P006 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab097660 Zm00039ab097660_P007 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab097660 Zm00039ab097660_P008 NA HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab097860 Zm00039ab097860_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab097860 Zm00039ab097860_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab097860 Zm00039ab097860_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab097860 Zm00039ab097860_P004 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P004 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab097860 Zm00039ab097860_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab097960 Zm00039ab097960_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab097960 Zm00039ab097960_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab097960 Zm00039ab097960_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab097960 Zm00039ab097960_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab098030 Zm00039ab098030_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098140 Zm00039ab098140_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098140 Zm00039ab098140_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098140 Zm00039ab098140_P003 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab098200 Zm00039ab098200_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P006 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab098230 Zm00039ab098230_P007 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab098380 Zm00039ab098380_P002 NA PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab098430 Zm00039ab098430_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab098430 Zm00039ab098430_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab098430 Zm00039ab098430_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab098430 Zm00039ab098430_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab098460 Zm00039ab098460_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab098460 Zm00039ab098460_P001 ubiquitous PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab098500 Zm00039ab098500_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab098500 Zm00039ab098500_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab098500 Zm00039ab098500_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab098500 Zm00039ab098500_P001 NA PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P003 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P003 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab098530 Zm00039ab098530_P003 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P003 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P003 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P003 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P003 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab098530 Zm00039ab098530_P003 excluded PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab098570 Zm00039ab098570_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab098600 Zm00039ab098600_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab098600 Zm00039ab098600_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab098600 Zm00039ab098600_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab098690 Zm00039ab098690_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098810 Zm00039ab098810_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098810 Zm00039ab098810_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab098810 Zm00039ab098810_P003 NA TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab098910 Zm00039ab098910_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab098910 Zm00039ab098910_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab098970 Zm00039ab098970_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab098970 Zm00039ab098970_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab098970 Zm00039ab098970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab098970 Zm00039ab098970_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab098970 Zm00039ab098970_P001 NA GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab099090 Zm00039ab099090_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab099220 Zm00039ab099220_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab099220 Zm00039ab099220_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab099230 Zm00039ab099230_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab099230 Zm00039ab099230_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab099240 Zm00039ab099240_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab099250 Zm00039ab099250_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab099310 Zm00039ab099310_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab099390 Zm00039ab099390_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab099390 Zm00039ab099390_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab099390 Zm00039ab099390_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab099800 Zm00039ab099800_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab099800 Zm00039ab099800_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab099800 Zm00039ab099800_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab099980 Zm00039ab099980_P002 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab100020 Zm00039ab100020_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab100040 Zm00039ab100040_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab100040 Zm00039ab100040_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab100330 Zm00039ab100330_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab100330 Zm00039ab100330_P001 ubiquitous PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab100550 Zm00039ab100550_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab100590 Zm00039ab100590_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab100590 Zm00039ab100590_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab100680 Zm00039ab100680_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab100720 Zm00039ab100720_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab100720 Zm00039ab100720_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab100720 Zm00039ab100720_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab100720 Zm00039ab100720_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab101210 Zm00039ab101210_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab101210 Zm00039ab101210_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab101210 Zm00039ab101210_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab101250 Zm00039ab101250_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab101250 Zm00039ab101250_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab101250 Zm00039ab101250_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab101260 Zm00039ab101260_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab101260 Zm00039ab101260_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab101260 Zm00039ab101260_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab101260 Zm00039ab101260_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab101340 Zm00039ab101340_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab101340 Zm00039ab101340_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab101340 Zm00039ab101340_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab101340 Zm00039ab101340_P001 expected PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P002 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P003 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P004 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P005 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab101370 Zm00039ab101370_P006 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab101390 Zm00039ab101390_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab101440 Zm00039ab101440_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab101440 Zm00039ab101440_P002 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab101440 Zm00039ab101440_P003 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab101560 Zm00039ab101560_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab101560 Zm00039ab101560_P001 conditional ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab101680 Zm00039ab101680_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab101680 Zm00039ab101680_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab101730 Zm00039ab101730_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab101730 Zm00039ab101730_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab101880 Zm00039ab101880_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab101880 Zm00039ab101880_P002 expected PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P002 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P003 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P003 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P003 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P003 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P003 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P004 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P004 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P004 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P004 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab101970 Zm00039ab101970_P004 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab102260 Zm00039ab102260_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab102260 Zm00039ab102260_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab102260 Zm00039ab102260_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab102260 Zm00039ab102260_P001 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab102310 Zm00039ab102310_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab102340 Zm00039ab102340_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab102410 Zm00039ab102410_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab102500 Zm00039ab102500_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab102610 Zm00039ab102610_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab102610 Zm00039ab102610_P001 excluded PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab102760 Zm00039ab102760_P001 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab102800 Zm00039ab102800_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab102800 Zm00039ab102800_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab102800 Zm00039ab102800_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab102800 Zm00039ab102800_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab102800 Zm00039ab102800_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab102800 Zm00039ab102800_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab102800 Zm00039ab102800_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab102800 Zm00039ab102800_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab102890 Zm00039ab102890_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab102890 Zm00039ab102890_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab102890 Zm00039ab102890_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab103020 Zm00039ab103020_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab103020 Zm00039ab103020_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab103210 Zm00039ab103210_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab103210 Zm00039ab103210_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab103300 Zm00039ab103300_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab103300 Zm00039ab103300_P002 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P003 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P003 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P003 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab103300 Zm00039ab103300_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab103300 Zm00039ab103300_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab103400 Zm00039ab103400_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab103410 Zm00039ab103410_P001 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab103530 Zm00039ab103530_P001 ubiquitous VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab103630 Zm00039ab103630_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab103630 Zm00039ab103630_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab103840 Zm00039ab103840_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab104050 Zm00039ab104050_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab104070 Zm00039ab104070_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab104070 Zm00039ab104070_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab104070 Zm00039ab104070_P003 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab104120 Zm00039ab104120_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab104130 Zm00039ab104130_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab104140 Zm00039ab104140_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab104140 Zm00039ab104140_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab104140 Zm00039ab104140_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab104140 Zm00039ab104140_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab104190 Zm00039ab104190_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab104270 Zm00039ab104270_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab104270 Zm00039ab104270_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00039ab104420 Zm00039ab104420_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00039ab104420 Zm00039ab104420_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00039ab104420 Zm00039ab104420_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab104480 Zm00039ab104480_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab104480 Zm00039ab104480_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab104480 Zm00039ab104480_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab104480 Zm00039ab104480_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab104480 Zm00039ab104480_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104590 Zm00039ab104590_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104590 Zm00039ab104590_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104590 Zm00039ab104590_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104620 Zm00039ab104620_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104620 Zm00039ab104620_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab104620 Zm00039ab104620_P001 ubiquitous PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab104720 Zm00039ab104720_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab104720 Zm00039ab104720_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab104720 Zm00039ab104720_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab104720 Zm00039ab104720_P002 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab105060 Zm00039ab105060_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab105060 Zm00039ab105060_P001 excluded PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab105060 Zm00039ab105060_P002 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab105060 Zm00039ab105060_P002 excluded PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105170 Zm00039ab105170_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105170 Zm00039ab105170_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105170 Zm00039ab105170_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105170 Zm00039ab105170_P005 NA PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105370 Zm00039ab105370_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105370 Zm00039ab105370_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105370 Zm00039ab105370_P003 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105370 Zm00039ab105370_P004 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105380 Zm00039ab105380_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105400 Zm00039ab105400_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab105400 Zm00039ab105400_P002 excluded PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab105490 Zm00039ab105490_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab105540 Zm00039ab105540_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab105540 Zm00039ab105540_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab105540 Zm00039ab105540_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105690 Zm00039ab105690_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab105690 Zm00039ab105690_P002 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab105750 Zm00039ab105750_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab105760 Zm00039ab105760_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab105760 Zm00039ab105760_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab105760 Zm00039ab105760_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab105760 Zm00039ab105760_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab105760 Zm00039ab105760_P005 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab106040 Zm00039ab106040_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab106040 Zm00039ab106040_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab106040 Zm00039ab106040_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab106040 Zm00039ab106040_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab106280 Zm00039ab106280_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab106280 Zm00039ab106280_P001 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab106340 Zm00039ab106340_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab106410 Zm00039ab106410_P001 conditional SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00039ab106630 Zm00039ab106630_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00039ab106630 Zm00039ab106630_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab106930 Zm00039ab106930_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab106930 Zm00039ab106930_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab107020 Zm00039ab107020_P001 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab107220 Zm00039ab107220_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab107220 Zm00039ab107220_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab107300 Zm00039ab107300_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab107450 Zm00039ab107450_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab107690 Zm00039ab107690_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab107690 Zm00039ab107690_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab107690 Zm00039ab107690_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab107690 Zm00039ab107690_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab107870 Zm00039ab107870_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab108130 Zm00039ab108130_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab108130 Zm00039ab108130_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab108130 Zm00039ab108130_P001 NA PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab108250 Zm00039ab108250_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab108250 Zm00039ab108250_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab108250 Zm00039ab108250_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab108250 Zm00039ab108250_P004 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab108250 Zm00039ab108250_P005 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab108360 Zm00039ab108360_P001 expected PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00039ab108370 Zm00039ab108370_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab108370 Zm00039ab108370_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab108420 Zm00039ab108420_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab108420 Zm00039ab108420_P001 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab108480 Zm00039ab108480_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab108480 Zm00039ab108480_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab108480 Zm00039ab108480_P003 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab108480 Zm00039ab108480_P004 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab108480 Zm00039ab108480_P005 viridiplantae PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab108500 Zm00039ab108500_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab108500 Zm00039ab108500_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab108500 Zm00039ab108500_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab108500 Zm00039ab108500_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab108500 Zm00039ab108500_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab108500 Zm00039ab108500_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab108500 Zm00039ab108500_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab108500 Zm00039ab108500_P001 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P001 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P002 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P002 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P002 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P002 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P003 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P003 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P003 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab108590 Zm00039ab108590_P003 NA PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab108600 Zm00039ab108600_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab109000 Zm00039ab109000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00039ab109360 Zm00039ab109360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00039ab109360 Zm00039ab109360_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab109790 Zm00039ab109790_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab109910 Zm00039ab109910_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab109910 Zm00039ab109910_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab109910 Zm00039ab109910_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab109910 Zm00039ab109910_P001 ubiquitous LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab109940 Zm00039ab109940_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab109940 Zm00039ab109940_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab110120 Zm00039ab110120_P002 viridiplantae PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab110130 Zm00039ab110130_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab110130 Zm00039ab110130_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab110130 Zm00039ab110130_P003 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab110170 Zm00039ab110170_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab110250 Zm00039ab110250_P004 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P005 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4144 EC-1.3.1.70 Zm00039ab110260 Zm00039ab110260_P006 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab110360 Zm00039ab110360_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab110430 Zm00039ab110430_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab110430 Zm00039ab110430_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab110430 Zm00039ab110430_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab110430 Zm00039ab110430_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab110430 Zm00039ab110430_P005 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab110490 Zm00039ab110490_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab110550 Zm00039ab110550_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation XYLULOKIN-RXN EC-2.7.1.17 Zm00039ab110590 Zm00039ab110590_P001 conditional XYLCAT-PWY D-xylose degradation I XYLULOKIN-RXN EC-2.7.1.17 Zm00039ab110590 Zm00039ab110590_P001 expected PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab110600 Zm00039ab110600_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab110640 Zm00039ab110640_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110640 Zm00039ab110640_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110640 Zm00039ab110640_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab110650 Zm00039ab110650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110650 Zm00039ab110650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110650 Zm00039ab110650_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab110660 Zm00039ab110660_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110660 Zm00039ab110660_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab110660 Zm00039ab110660_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab110750 Zm00039ab110750_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab110850 Zm00039ab110850_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00039ab110960 Zm00039ab110960_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab111380 Zm00039ab111380_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab111410 Zm00039ab111410_P004 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab111490 Zm00039ab111490_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00039ab111530 Zm00039ab111530_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00039ab111530 Zm00039ab111530_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00039ab111540 Zm00039ab111540_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab111570 Zm00039ab111570_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab111680 Zm00039ab111680_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab111680 Zm00039ab111680_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab112050 Zm00039ab112050_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab112050 Zm00039ab112050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab112050 Zm00039ab112050_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab112060 Zm00039ab112060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab112060 Zm00039ab112060_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab112060 Zm00039ab112060_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab112230 Zm00039ab112230_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab112260 Zm00039ab112260_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab112280 Zm00039ab112280_P002 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab112380 Zm00039ab112380_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab112380 Zm00039ab112380_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab112380 Zm00039ab112380_P001 excluded PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab112590 Zm00039ab112590_P001 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab112590 Zm00039ab112590_P002 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab112590 Zm00039ab112590_P003 conditional PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab112590 Zm00039ab112590_P004 conditional PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab112620 Zm00039ab112620_P002 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P003 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P003 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P003 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab112640 Zm00039ab112640_P003 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab112650 Zm00039ab112650_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab112680 Zm00039ab112680_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab112680 Zm00039ab112680_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab112680 Zm00039ab112680_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab112790 Zm00039ab112790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab112790 Zm00039ab112790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab112790 Zm00039ab112790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab112800 Zm00039ab112800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab112800 Zm00039ab112800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab112800 Zm00039ab112800_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab113040 Zm00039ab113040_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab113040 Zm00039ab113040_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab113100 Zm00039ab113100_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab113100 Zm00039ab113100_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab113170 Zm00039ab113170_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab113170 Zm00039ab113170_P002 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab113260 Zm00039ab113260_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab113260 Zm00039ab113260_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab113260 Zm00039ab113260_P001 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab113300 Zm00039ab113300_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab113300 Zm00039ab113300_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab113450 Zm00039ab113450_P001 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab113520 Zm00039ab113520_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab113520 Zm00039ab113520_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab113520 Zm00039ab113520_P001 NA PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab113530 Zm00039ab113530_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab113530 Zm00039ab113530_P002 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab113530 Zm00039ab113530_P003 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab113550 Zm00039ab113550_P001 viridiplantae PWY66-399 gluconeogenesis III RXN66-526 EC-3.1.3.58 Zm00039ab113650 Zm00039ab113650_P001 conditional PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00039ab113650 Zm00039ab113650_P002 expected RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab113650 Zm00039ab113650_P003 viridiplantae PWY-3881 mannitol biosynthesis MANNITOL-1-PHOSPHATASE-RXN EC-3.1.3.22 Zm00039ab113650 Zm00039ab113650_P004 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab113730 Zm00039ab113730_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab113730 Zm00039ab113730_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab113970 Zm00039ab113970_P002 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab114440 Zm00039ab114440_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab114440 Zm00039ab114440_P002 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab114660 Zm00039ab114660_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab114660 Zm00039ab114660_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab114830 Zm00039ab114830_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab114830 Zm00039ab114830_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab114830 Zm00039ab114830_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab114860 Zm00039ab114860_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab114860 Zm00039ab114860_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab114860 Zm00039ab114860_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab114860 Zm00039ab114860_P004 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab114920 Zm00039ab114920_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab114950 Zm00039ab114950_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab115180 Zm00039ab115180_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab115180 Zm00039ab115180_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab115190 Zm00039ab115190_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab115320 Zm00039ab115320_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab115330 Zm00039ab115330_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab115460 Zm00039ab115460_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab115460 Zm00039ab115460_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab115460 Zm00039ab115460_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab115460 Zm00039ab115460_P004 expected PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab115580 Zm00039ab115580_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab115610 Zm00039ab115610_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab115640 Zm00039ab115640_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab115640 Zm00039ab115640_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab115660 Zm00039ab115660_P001 expected PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00039ab115740 Zm00039ab115740_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab115810 Zm00039ab115810_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab115880 Zm00039ab115880_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115880 Zm00039ab115880_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab115880 Zm00039ab115880_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115880 Zm00039ab115880_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab115960 Zm00039ab115960_P004 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab116040 Zm00039ab116040_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab116040 Zm00039ab116040_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab116080 Zm00039ab116080_P002 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P004 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P005 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P005 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P006 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab116170 Zm00039ab116170_P006 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab116190 Zm00039ab116190_P002 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00039ab116210 Zm00039ab116210_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00039ab116210 Zm00039ab116210_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116230 Zm00039ab116230_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116230 Zm00039ab116230_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116230 Zm00039ab116230_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116250 Zm00039ab116250_P004 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116270 Zm00039ab116270_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116270 Zm00039ab116270_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116270 Zm00039ab116270_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116280 Zm00039ab116280_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116280 Zm00039ab116280_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116280 Zm00039ab116280_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116400 Zm00039ab116400_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116400 Zm00039ab116400_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116400 Zm00039ab116400_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116410 Zm00039ab116410_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab116410 Zm00039ab116410_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab116410 Zm00039ab116410_P001 NA PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab116470 Zm00039ab116470_P001 conditional PWY-2602 brassinosteroid biosynthesis III RXN-4262 EC-1.1.1.145 Zm00039ab116620 Zm00039ab116620_P001 NA PWY-2602 brassinosteroid biosynthesis III RXN-4264 EC-1.1.1.51 Zm00039ab116620 Zm00039ab116620_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab116730 Zm00039ab116730_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab116730 Zm00039ab116730_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab116730 Zm00039ab116730_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab116730 Zm00039ab116730_P001 NA PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab116760 Zm00039ab116760_P001 conditional PWY-401 galactolipid biosynthesis I RXN-1226 EC-2.4.1.184 Zm00039ab116760 Zm00039ab116760_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116840 Zm00039ab116840_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116840 Zm00039ab116840_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116840 Zm00039ab116840_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116840 Zm00039ab116840_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab116840 Zm00039ab116840_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab116860 Zm00039ab116860_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab116860 Zm00039ab116860_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab116860 Zm00039ab116860_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab116860 Zm00039ab116860_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab116890 Zm00039ab116890_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116960 Zm00039ab116960_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116960 Zm00039ab116960_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab116960 Zm00039ab116960_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab116960 Zm00039ab116960_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab116960 Zm00039ab116960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab117340 Zm00039ab117340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab117930 Zm00039ab117930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab117930 Zm00039ab117930_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab118010 Zm00039ab118010_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab118010 Zm00039ab118010_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab118010 Zm00039ab118010_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab118020 Zm00039ab118020_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab118020 Zm00039ab118020_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab118020 Zm00039ab118020_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab118030 Zm00039ab118030_P001 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00039ab118030 Zm00039ab118030_P001 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00039ab118030 Zm00039ab118030_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab118030 Zm00039ab118030_P002 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00039ab118030 Zm00039ab118030_P002 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00039ab118030 Zm00039ab118030_P002 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab118030 Zm00039ab118030_P003 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00039ab118030 Zm00039ab118030_P003 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00039ab118030 Zm00039ab118030_P003 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab118030 Zm00039ab118030_P004 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00039ab118030 Zm00039ab118030_P004 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00039ab118030 Zm00039ab118030_P004 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab118030 Zm00039ab118030_P005 ubiquitous GLYOXDEG-PWY glycolate and glyoxylate degradation II GLYCOLATEDEHYDRO-RXN EC-1.1.99.14 Zm00039ab118030 Zm00039ab118030_P005 conditional PWY-5386 methylglyoxal degradation I DLACTDEHYDROGFAD-RXN EC-1.1.5.12 Zm00039ab118030 Zm00039ab118030_P005 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab118190 Zm00039ab118190_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab118220 Zm00039ab118220_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab118250 Zm00039ab118250_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab118250 Zm00039ab118250_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab118250 Zm00039ab118250_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab118250 Zm00039ab118250_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab118250 Zm00039ab118250_P005 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab118360 Zm00039ab118360_P001 ubiquitous PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab118370 Zm00039ab118370_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab118370 Zm00039ab118370_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab118470 Zm00039ab118470_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab118470 Zm00039ab118470_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab118470 Zm00039ab118470_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab118470 Zm00039ab118470_P004 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab118490 Zm00039ab118490_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab118490 Zm00039ab118490_P002 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab118750 Zm00039ab118750_P003 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab118880 Zm00039ab118880_P003 conditional PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00039ab118940 Zm00039ab118940_P001 ubiquitous PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00039ab118940 Zm00039ab118940_P002 ubiquitous PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P001 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P001 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab119000 Zm00039ab119000_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P002 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P002 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P002 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P002 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P002 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab119000 Zm00039ab119000_P002 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P003 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P003 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P003 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P003 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P003 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P003 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab119000 Zm00039ab119000_P003 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P004 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P004 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab119000 Zm00039ab119000_P004 NA ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab119000 Zm00039ab119000_P004 viridiplantae PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P004 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab119000 Zm00039ab119000_P004 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab119000 Zm00039ab119000_P004 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab119020 Zm00039ab119020_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab119350 Zm00039ab119350_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab119350 Zm00039ab119350_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab119350 Zm00039ab119350_P001 viridiplantae PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00039ab119580 Zm00039ab119580_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00039ab119580 Zm00039ab119580_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab119590 Zm00039ab119590_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab119590 Zm00039ab119590_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab119720 Zm00039ab119720_P001 NA PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab119960 Zm00039ab119960_P001 ubiquitous PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab120000 Zm00039ab120000_P001 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00039ab120090 Zm00039ab120090_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab120200 Zm00039ab120200_P004 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120240 Zm00039ab120240_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120240 Zm00039ab120240_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120240 Zm00039ab120240_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab120520 Zm00039ab120520_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120530 Zm00039ab120530_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120530 Zm00039ab120530_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120530 Zm00039ab120530_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120540 Zm00039ab120540_P002 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PHOSACETYLGLUCOSAMINEMUT-RXN EC-5.4.2.3 Zm00039ab120550 Zm00039ab120550_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab120670 Zm00039ab120670_P003 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4243 EC-1.14.19.41 Zm00039ab120860 Zm00039ab120860_P001 ubiquitous PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab120910 Zm00039ab120910_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab120910 Zm00039ab120910_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab120910 Zm00039ab120910_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab120910 Zm00039ab120910_P004 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab120940 Zm00039ab120940_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab121020 Zm00039ab121020_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab121020 Zm00039ab121020_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab121020 Zm00039ab121020_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab121020 Zm00039ab121020_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab121020 Zm00039ab121020_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab121020 Zm00039ab121020_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab121090 Zm00039ab121090_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab121090 Zm00039ab121090_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab121090 Zm00039ab121090_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab121130 Zm00039ab121130_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab121130 Zm00039ab121130_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab121130 Zm00039ab121130_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00039ab121160 Zm00039ab121160_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00039ab121160 Zm00039ab121160_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AIRCARBOXY-RXN EC-4.1.1.21 Zm00039ab121160 Zm00039ab121160_P003 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab121440 Zm00039ab121440_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab121440 Zm00039ab121440_P001 NA PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab121480 Zm00039ab121480_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab121510 Zm00039ab121510_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab121510 Zm00039ab121510_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab121510 Zm00039ab121510_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab121510 Zm00039ab121510_P004 expected ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab121560 Zm00039ab121560_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab121560 Zm00039ab121560_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab121560 Zm00039ab121560_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab121560 Zm00039ab121560_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab121630 Zm00039ab121630_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab121810 Zm00039ab121810_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab121830 Zm00039ab121830_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab121830 Zm00039ab121830_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab121830 Zm00039ab121830_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab121830 Zm00039ab121830_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab121940 Zm00039ab121940_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab121940 Zm00039ab121940_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab121940 Zm00039ab121940_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab121980 Zm00039ab121980_P005 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab122040 Zm00039ab122040_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab122040 Zm00039ab122040_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab122040 Zm00039ab122040_P001 manual PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab122060 Zm00039ab122060_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab122060 Zm00039ab122060_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab122060 Zm00039ab122060_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab122090 Zm00039ab122090_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab122170 Zm00039ab122170_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab122170 Zm00039ab122170_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab122500 Zm00039ab122500_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab122500 Zm00039ab122500_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab122890 Zm00039ab122890_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab122890 Zm00039ab122890_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab122890 Zm00039ab122890_P003 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab123120 Zm00039ab123120_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab123120 Zm00039ab123120_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123120 Zm00039ab123120_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab123120 Zm00039ab123120_P003 ubiquitous PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00039ab123140 Zm00039ab123140_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab123230 Zm00039ab123230_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab123230 Zm00039ab123230_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab123240 Zm00039ab123240_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab123240 Zm00039ab123240_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab123240 Zm00039ab123240_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab123240 Zm00039ab123240_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab123250 Zm00039ab123250_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab123250 Zm00039ab123250_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab123410 Zm00039ab123410_P001 viridiplantae PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab123490 Zm00039ab123490_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P007 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P007 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P007 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P008 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P008 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P008 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P009 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P009 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab123510 Zm00039ab123510_P009 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5466 EC-2.4.1.258 Zm00039ab123540 Zm00039ab123540_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5466 EC-2.4.1.258 Zm00039ab123540 Zm00039ab123540_P002 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab123630 Zm00039ab123630_P001 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab123660 Zm00039ab123660_P002 conditional PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab123700 Zm00039ab123700_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab123700 Zm00039ab123700_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P002 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P003 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P003 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P004 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab123710 Zm00039ab123710_P004 expected PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab123740 Zm00039ab123740_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab123740 Zm00039ab123740_P002 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab124120 Zm00039ab124120_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab124120 Zm00039ab124120_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab124120 Zm00039ab124120_P001 NA PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab124180 Zm00039ab124180_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab124230 Zm00039ab124230_P002 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab124300 Zm00039ab124300_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab124300 Zm00039ab124300_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab124300 Zm00039ab124300_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab124300 Zm00039ab124300_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab124300 Zm00039ab124300_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab124320 Zm00039ab124320_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab124460 Zm00039ab124460_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab124480 Zm00039ab124480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab124480 Zm00039ab124480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab124480 Zm00039ab124480_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab124560 Zm00039ab124560_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab124860 Zm00039ab124860_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124880 Zm00039ab124880_P005 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124910 Zm00039ab124910_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab124920 Zm00039ab124920_P002 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P004 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P004 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab124970 Zm00039ab124970_P004 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab125000 Zm00039ab125000_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab125000 Zm00039ab125000_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab125000 Zm00039ab125000_P003 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab125060 Zm00039ab125060_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab125060 Zm00039ab125060_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab125060 Zm00039ab125060_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab125110 Zm00039ab125110_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab125180 Zm00039ab125180_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab125180 Zm00039ab125180_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab125180 Zm00039ab125180_P003 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab125620 Zm00039ab125620_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab125820 Zm00039ab125820_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab125820 Zm00039ab125820_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab125820 Zm00039ab125820_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab125820 Zm00039ab125820_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab125960 Zm00039ab125960_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab125960 Zm00039ab125960_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab125960 Zm00039ab125960_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab125960 Zm00039ab125960_P004 conditional PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P004 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P005 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P005 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P005 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P006 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P006 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P006 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P006 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P007 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P007 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P007 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126000 Zm00039ab126000_P007 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126040 Zm00039ab126040_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126040 Zm00039ab126040_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab126040 Zm00039ab126040_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab126040 Zm00039ab126040_P001 NA PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab126060 Zm00039ab126060_P001 conditional PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00039ab126120 Zm00039ab126120_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00039ab126120 Zm00039ab126120_P001 ubiquitous PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00039ab126120 Zm00039ab126120_P002 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00039ab126120 Zm00039ab126120_P002 ubiquitous PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab126250 Zm00039ab126250_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab126420 Zm00039ab126420_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab126420 Zm00039ab126420_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab126420 Zm00039ab126420_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab126420 Zm00039ab126420_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab126420 Zm00039ab126420_P005 conditional PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab126600 Zm00039ab126600_P002 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab126780 Zm00039ab126780_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab127000 Zm00039ab127000_P004 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab127040 Zm00039ab127040_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab127040 Zm00039ab127040_P001 expected GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab127110 Zm00039ab127110_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab127210 Zm00039ab127210_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab127480 Zm00039ab127480_P002 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab127690 Zm00039ab127690_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab127750 Zm00039ab127750_P003 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab127790 Zm00039ab127790_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab127790 Zm00039ab127790_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab127790 Zm00039ab127790_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab127850 Zm00039ab127850_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab127850 Zm00039ab127850_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab127850 Zm00039ab127850_P001 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab127990 Zm00039ab127990_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab128000 Zm00039ab128000_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab128070 Zm00039ab128070_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P004 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P005 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P006 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P007 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P008 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P009 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab128210 Zm00039ab128210_P010 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab128220 Zm00039ab128220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab128220 Zm00039ab128220_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab128220 Zm00039ab128220_P003 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab128350 Zm00039ab128350_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab128350 Zm00039ab128350_P001 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab128370 Zm00039ab128370_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab128370 Zm00039ab128370_P002 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab128370 Zm00039ab128370_P003 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab128470 Zm00039ab128470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab128470 Zm00039ab128470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab128470 Zm00039ab128470_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab128470 Zm00039ab128470_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab128640 Zm00039ab128640_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab128870 Zm00039ab128870_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab128870 Zm00039ab128870_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab129020 Zm00039ab129020_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab129050 Zm00039ab129050_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab129050 Zm00039ab129050_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab129120 Zm00039ab129120_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab129600 Zm00039ab129600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab129600 Zm00039ab129600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab129600 Zm00039ab129600_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00039ab129670 Zm00039ab129670_P001 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00039ab129670 Zm00039ab129670_P002 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00039ab129670 Zm00039ab129670_P003 conditional PWY-5983 trehalose biosynthesis VI RXN-9603 EC-2.4.1.245 Zm00039ab129670 Zm00039ab129670_P004 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab129710 Zm00039ab129710_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab129710 Zm00039ab129710_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab129750 Zm00039ab129750_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab129820 Zm00039ab129820_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab129890 Zm00039ab129890_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab129890 Zm00039ab129890_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab129890 Zm00039ab129890_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab129890 Zm00039ab129890_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab129900 Zm00039ab129900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab129900 Zm00039ab129900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab129900 Zm00039ab129900_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab130080 Zm00039ab130080_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab130140 Zm00039ab130140_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab130140 Zm00039ab130140_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab130140 Zm00039ab130140_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab130140 Zm00039ab130140_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab130620 Zm00039ab130620_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab130620 Zm00039ab130620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab130640 Zm00039ab130640_P001 viridiplantae LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab130690 Zm00039ab130690_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab130690 Zm00039ab130690_P001 NA PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00039ab130750 Zm00039ab130750_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab130910 Zm00039ab130910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130910 Zm00039ab130910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130910 Zm00039ab130910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab130920 Zm00039ab130920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130920 Zm00039ab130920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130920 Zm00039ab130920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab130930 Zm00039ab130930_P002 conditional PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab130980 Zm00039ab130980_P001 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab131070 Zm00039ab131070_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab131070 Zm00039ab131070_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab131080 Zm00039ab131080_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab131080 Zm00039ab131080_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab131090 Zm00039ab131090_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOLINATE-SYNTHA-RXN EC-2.5.1.72 Zm00039ab131130 Zm00039ab131130_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab131170 Zm00039ab131170_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab131170 Zm00039ab131170_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab131170 Zm00039ab131170_P003 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab131430 Zm00039ab131430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab131600 Zm00039ab131600_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab131900 Zm00039ab131900_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab131900 Zm00039ab131900_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00039ab131920 Zm00039ab131920_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00039ab131920 Zm00039ab131920_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00039ab131920 Zm00039ab131920_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 2.3.1.168-RXN EC-2.3.1.168 Zm00039ab131920 Zm00039ab131920_P004 viridiplantae PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00039ab131930 Zm00039ab131930_P001 expected SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P004 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P005 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P005 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P005 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P005 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab132240 Zm00039ab132240_P005 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab132260 Zm00039ab132260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab132260 Zm00039ab132260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab132260 Zm00039ab132260_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab132310 Zm00039ab132310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab132310 Zm00039ab132310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab132310 Zm00039ab132310_P001 conditional PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab132390 Zm00039ab132390_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab132390 Zm00039ab132390_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab132390 Zm00039ab132390_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab132540 Zm00039ab132540_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab132560 Zm00039ab132560_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P002 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P003 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P004 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P004 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P005 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P005 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab133080 Zm00039ab133080_P005 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab133140 Zm00039ab133140_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab133180 Zm00039ab133180_P001 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab133180 Zm00039ab133180_P003 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P006 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P006 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab133190 Zm00039ab133190_P006 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab133320 Zm00039ab133320_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab133330 Zm00039ab133330_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab133360 Zm00039ab133360_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab133360 Zm00039ab133360_P002 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab133360 Zm00039ab133360_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab133400 Zm00039ab133400_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab133400 Zm00039ab133400_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab133400 Zm00039ab133400_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab133920 Zm00039ab133920_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab133920 Zm00039ab133920_P001 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab134340 Zm00039ab134340_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab134450 Zm00039ab134450_P001 NA PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-7788 EC-4.2.3.30 Zm00039ab134930 Zm00039ab134930_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab135030 Zm00039ab135030_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab135190 Zm00039ab135190_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab135210 Zm00039ab135210_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab135210 Zm00039ab135210_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab135210 Zm00039ab135210_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab135230 Zm00039ab135230_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab135230 Zm00039ab135230_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab135320 Zm00039ab135320_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab135520 Zm00039ab135520_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab135520 Zm00039ab135520_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab135550 Zm00039ab135550_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab135550 Zm00039ab135550_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab135820 Zm00039ab135820_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab135820 Zm00039ab135820_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab136080 Zm00039ab136080_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab136260 Zm00039ab136260_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab136340 Zm00039ab136340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab136340 Zm00039ab136340_P002 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab136380 Zm00039ab136380_P001 conditional PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab136610 Zm00039ab136610_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab136610 Zm00039ab136610_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab136640 Zm00039ab136640_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab137000 Zm00039ab137000_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab137000 Zm00039ab137000_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab137000 Zm00039ab137000_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab137000 Zm00039ab137000_P002 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P001 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P002 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P003 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P004 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P005 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P005 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P006 expected PLPSAL-PWY pyridoxal 5'-phosphate salvage I PNKIN-RXN EC-2.7.1.35 Zm00039ab137040 Zm00039ab137040_P006 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab137090 Zm00039ab137090_P003 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab137170 Zm00039ab137170_P001 expected PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab137320 Zm00039ab137320_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab137320 Zm00039ab137320_P002 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab137320 Zm00039ab137320_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab137400 Zm00039ab137400_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab137500 Zm00039ab137500_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab137500 Zm00039ab137500_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab137500 Zm00039ab137500_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab137500 Zm00039ab137500_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab137770 Zm00039ab137770_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab137770 Zm00039ab137770_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab137770 Zm00039ab137770_P003 expected PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab137930 Zm00039ab137930_P001 ubiquitous PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00039ab138280 Zm00039ab138280_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMEPIM-RXN EC-5.1.1.7 Zm00039ab138280 Zm00039ab138280_P002 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab138450 Zm00039ab138450_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab138480 Zm00039ab138480_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab138520 Zm00039ab138520_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab138710 Zm00039ab138710_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab138710 Zm00039ab138710_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab138710 Zm00039ab138710_P001 manual PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab138740 Zm00039ab138740_P003 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab138800 Zm00039ab138800_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab138800 Zm00039ab138800_P001 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab138800 Zm00039ab138800_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab138800 Zm00039ab138800_P002 excluded PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab139020 Zm00039ab139020_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab139020 Zm00039ab139020_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab139020 Zm00039ab139020_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab139020 Zm00039ab139020_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab139020 Zm00039ab139020_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab139190 Zm00039ab139190_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab139190 Zm00039ab139190_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab139190 Zm00039ab139190_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab139190 Zm00039ab139190_P001 NA PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab139200 Zm00039ab139200_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab139350 Zm00039ab139350_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab139370 Zm00039ab139370_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab139370 Zm00039ab139370_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab139370 Zm00039ab139370_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab139370 Zm00039ab139370_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab139380 Zm00039ab139380_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab139440 Zm00039ab139440_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab139440 Zm00039ab139440_P004 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P003 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P004 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTATHIONE-SYN-RXN EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P004 NA PWY-8043 ophthalmate biosynthesis RXN-20401 EC-6.3.2.3 Zm00039ab139460 Zm00039ab139460_P004 NA PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab139570 Zm00039ab139570_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab139570 Zm00039ab139570_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab139570 Zm00039ab139570_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab139570 Zm00039ab139570_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab139570 Zm00039ab139570_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab139570 Zm00039ab139570_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab139570 Zm00039ab139570_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab139570 Zm00039ab139570_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab139570 Zm00039ab139570_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab139570 Zm00039ab139570_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab139570 Zm00039ab139570_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab139570 Zm00039ab139570_P001 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab139590 Zm00039ab139590_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab139590 Zm00039ab139590_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab139590 Zm00039ab139590_P003 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab139740 Zm00039ab139740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8684 EC-1.23.1.4 Zm00039ab139740 Zm00039ab139740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab139750 Zm00039ab139750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00039ab139750 Zm00039ab139750_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab139880 Zm00039ab139880_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab139880 Zm00039ab139880_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab139880 Zm00039ab139880_P003 viridiplantae PWY-861 dhurrin biosynthesis RXN-743 EC-2.4.1.85 Zm00039ab139890 Zm00039ab139890_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab139940 Zm00039ab139940_P005 conditional PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P002 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P003 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis KDO-8PSYNTH-RXN EC-2.5.1.55 Zm00039ab139980 Zm00039ab139980_P003 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab140000 Zm00039ab140000_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab140010 Zm00039ab140010_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab140220 Zm00039ab140220_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab140320 Zm00039ab140320_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab140320 Zm00039ab140320_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab140320 Zm00039ab140320_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab140350 Zm00039ab140350_P003 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab140370 Zm00039ab140370_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P003 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P003 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P003 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P004 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P004 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P004 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P005 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P005 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P005 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P006 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P006 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab140380 Zm00039ab140380_P006 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab140480 Zm00039ab140480_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab140480 Zm00039ab140480_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab140480 Zm00039ab140480_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab140530 Zm00039ab140530_P005 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab140820 Zm00039ab140820_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab141500 Zm00039ab141500_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab141500 Zm00039ab141500_P002 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P004 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P005 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P006 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab141560 Zm00039ab141560_P007 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00039ab141600 Zm00039ab141600_P001 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00039ab141600 Zm00039ab141600_P002 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00039ab141600 Zm00039ab141600_P003 expected PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00039ab141600 Zm00039ab141600_P004 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab141700 Zm00039ab141700_P006 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab141760 Zm00039ab141760_P001 ubiquitous PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab141810 Zm00039ab141810_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab141810 Zm00039ab141810_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab141910 Zm00039ab141910_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141910 Zm00039ab141910_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141910 Zm00039ab141910_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab141920 Zm00039ab141920_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab142100 Zm00039ab142100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab142100 Zm00039ab142100_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P004 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P005 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab142180 Zm00039ab142180_P006 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab142210 Zm00039ab142210_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab142270 Zm00039ab142270_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab142410 Zm00039ab142410_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab142500 Zm00039ab142500_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab142500 Zm00039ab142500_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab142500 Zm00039ab142500_P003 expected PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab142510 Zm00039ab142510_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab142510 Zm00039ab142510_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab142510 Zm00039ab142510_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab142510 Zm00039ab142510_P002 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab142520 Zm00039ab142520_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab142520 Zm00039ab142520_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142570 Zm00039ab142570_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142570 Zm00039ab142570_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142570 Zm00039ab142570_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142600 Zm00039ab142600_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142610 Zm00039ab142610_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142610 Zm00039ab142610_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142610 Zm00039ab142610_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142620 Zm00039ab142620_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142620 Zm00039ab142620_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142620 Zm00039ab142620_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142630 Zm00039ab142630_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142630 Zm00039ab142630_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142630 Zm00039ab142630_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142650 Zm00039ab142650_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142650 Zm00039ab142650_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142650 Zm00039ab142650_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab142660 Zm00039ab142660_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab142660 Zm00039ab142660_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab142660 Zm00039ab142660_P001 conditional PROSYN-PWY L-proline biosynthesis I PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00039ab142760 Zm00039ab142760_P001 conditional PWY-3341 L-proline biosynthesis III PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00039ab142760 Zm00039ab142760_P001 ubiquitous ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) PYRROLINECARBREDUCT-RXN EC-1.5.1.2 Zm00039ab142760 Zm00039ab142760_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab142800 Zm00039ab142800_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab142810 Zm00039ab142810_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab142850 Zm00039ab142850_P001 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab142850 Zm00039ab142850_P002 conditional PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab142850 Zm00039ab142850_P003 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab143140 Zm00039ab143140_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00039ab143170 Zm00039ab143170_P001 conditional PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab143180 Zm00039ab143180_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab143180 Zm00039ab143180_P002 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab143180 Zm00039ab143180_P003 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab143180 Zm00039ab143180_P004 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab143180 Zm00039ab143180_P005 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab143330 Zm00039ab143330_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab143330 Zm00039ab143330_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab143330 Zm00039ab143330_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab143330 Zm00039ab143330_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab143500 Zm00039ab143500_P004 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab143510 Zm00039ab143510_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab143820 Zm00039ab143820_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab143820 Zm00039ab143820_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab143820 Zm00039ab143820_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab143970 Zm00039ab143970_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab143970 Zm00039ab143970_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab143970 Zm00039ab143970_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab144150 Zm00039ab144150_P003 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab144230 Zm00039ab144230_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab144230 Zm00039ab144230_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab144230 Zm00039ab144230_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab144230 Zm00039ab144230_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab144230 Zm00039ab144230_P005 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144260 Zm00039ab144260_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab144290 Zm00039ab144290_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab144290 Zm00039ab144290_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab144290 Zm00039ab144290_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab144290 Zm00039ab144290_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab144290 Zm00039ab144290_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144330 Zm00039ab144330_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144330 Zm00039ab144330_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144340 Zm00039ab144340_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144340 Zm00039ab144340_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144340 Zm00039ab144340_P003 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab144350 Zm00039ab144350_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab144350 Zm00039ab144350_P001 viridiplantae PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00039ab144430 Zm00039ab144430_P001 conditional PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00039ab144430 Zm00039ab144430_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144770 Zm00039ab144770_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144770 Zm00039ab144770_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab144770 Zm00039ab144770_P003 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab144780 Zm00039ab144780_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab144780 Zm00039ab144780_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab144780 Zm00039ab144780_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab144780 Zm00039ab144780_P004 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab144780 Zm00039ab144780_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab144860 Zm00039ab144860_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab144940 Zm00039ab144940_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab144940 Zm00039ab144940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab145140 Zm00039ab145140_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab145250 Zm00039ab145250_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab145690 Zm00039ab145690_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab145820 Zm00039ab145820_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P002 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P003 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P003 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P004 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P004 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00039ab145870 Zm00039ab145870_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab145940 Zm00039ab145940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab145940 Zm00039ab145940_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P006 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P006 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P006 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab146080 Zm00039ab146080_P006 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab146130 Zm00039ab146130_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab146210 Zm00039ab146210_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P002 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P002 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P003 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P003 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P004 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P004 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab146470 Zm00039ab146470_P004 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146490 Zm00039ab146490_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P001 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P002 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P002 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P002 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P003 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P003 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P003 conditional PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P004 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P004 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab146510 Zm00039ab146510_P004 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab146900 Zm00039ab146900_P003 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab146980 Zm00039ab146980_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab146980 Zm00039ab146980_P002 conditional PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P003 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P003 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P003 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00039ab146980 Zm00039ab146980_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00039ab146980 Zm00039ab146980_P003 NA PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P004 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P004 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P004 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab146980 Zm00039ab146980_P004 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00039ab146980 Zm00039ab146980_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00039ab146980 Zm00039ab146980_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab147070 Zm00039ab147070_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab147080 Zm00039ab147080_P001 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab147150 Zm00039ab147150_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab147150 Zm00039ab147150_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab147310 Zm00039ab147310_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab147510 Zm00039ab147510_P001 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab147650 Zm00039ab147650_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab147680 Zm00039ab147680_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab147680 Zm00039ab147680_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab147680 Zm00039ab147680_P003 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00039ab147760 Zm00039ab147760_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00039ab147760 Zm00039ab147760_P001 expected PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00039ab147760 Zm00039ab147760_P002 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00039ab147760 Zm00039ab147760_P002 expected PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab147810 Zm00039ab147810_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab147810 Zm00039ab147810_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab147890 Zm00039ab147890_P004 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab147910 Zm00039ab147910_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab147910 Zm00039ab147910_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab147910 Zm00039ab147910_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab147910 Zm00039ab147910_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab147910 Zm00039ab147910_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab147910 Zm00039ab147910_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab148130 Zm00039ab148130_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab148170 Zm00039ab148170_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab148250 Zm00039ab148250_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab148250 Zm00039ab148250_P002 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab148260 Zm00039ab148260_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab148270 Zm00039ab148270_P001 conditional PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab148280 Zm00039ab148280_P001 conditional PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00039ab148330 Zm00039ab148330_P001 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00039ab148330 Zm00039ab148330_P002 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00039ab148330 Zm00039ab148330_P003 expected PWY-5691 urate conversion to allantoin I URATE-OXIDASE-RXN EC-1.7.3.3 Zm00039ab148330 Zm00039ab148330_P004 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab148560 Zm00039ab148560_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab148580 Zm00039ab148580_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab148590 Zm00039ab148590_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab148600 Zm00039ab148600_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab148700 Zm00039ab148700_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab148700 Zm00039ab148700_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab148700 Zm00039ab148700_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00039ab148900 Zm00039ab148900_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00039ab148900 Zm00039ab148900_P001 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00039ab148900 Zm00039ab148900_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00039ab148900 Zm00039ab148900_P002 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00039ab148900 Zm00039ab148900_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00039ab148900 Zm00039ab148900_P003 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00039ab148900 Zm00039ab148900_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00039ab148900 Zm00039ab148900_P004 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS-RXN EC-2.4.99.12 Zm00039ab148900 Zm00039ab148900_P005 conditional KDOSYN-PWY Kdo transfer to lipid IVA I KDOTRANS2-RXN EC-2.4.99.13 Zm00039ab148900 Zm00039ab148900_P005 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab149070 Zm00039ab149070_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab149070 Zm00039ab149070_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab149070 Zm00039ab149070_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab149070 Zm00039ab149070_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab149110 Zm00039ab149110_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab149110 Zm00039ab149110_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab149110 Zm00039ab149110_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab149110 Zm00039ab149110_P005 expected CALVIN-PWY Calvin-Benson-Bassham cycle SEDOHEPTULOSE-BISPHOSPHATASE-RXN EC-3.1.3.37 Zm00039ab149250 Zm00039ab149250_P001 viridiplantae PWY-7238 sucrose biosynthesis II RXN-14353 EC-2.4.1.1 Zm00039ab149290 Zm00039ab149290_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab149340 Zm00039ab149340_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab149340 Zm00039ab149340_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab149340 Zm00039ab149340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P004 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149350 Zm00039ab149350_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149360 Zm00039ab149360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149360 Zm00039ab149360_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab149500 Zm00039ab149500_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab149500 Zm00039ab149500_P001 conditional PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab149520 Zm00039ab149520_P004 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab149600 Zm00039ab149600_P004 ubiquitous PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab149610 Zm00039ab149610_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab149610 Zm00039ab149610_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab149610 Zm00039ab149610_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab149610 Zm00039ab149610_P001 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab149670 Zm00039ab149670_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149750 Zm00039ab149750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149750 Zm00039ab149750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149780 Zm00039ab149780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149780 Zm00039ab149780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149790 Zm00039ab149790_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab149790 Zm00039ab149790_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab150040 Zm00039ab150040_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab150150 Zm00039ab150150_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab150580 Zm00039ab150580_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab150580 Zm00039ab150580_P002 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab150610 Zm00039ab150610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab150610 Zm00039ab150610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab150610 Zm00039ab150610_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab150680 Zm00039ab150680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab150750 Zm00039ab150750_P003 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab150760 Zm00039ab150760_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab150760 Zm00039ab150760_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab150760 Zm00039ab150760_P001 manual MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab150790 Zm00039ab150790_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab150790 Zm00039ab150790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151050 Zm00039ab151050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151130 Zm00039ab151130_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151220 Zm00039ab151220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151220 Zm00039ab151220_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151220 Zm00039ab151220_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab151250 Zm00039ab151250_P003 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab151430 Zm00039ab151430_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab151460 Zm00039ab151460_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab151500 Zm00039ab151500_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab151500 Zm00039ab151500_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab151720 Zm00039ab151720_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab151720 Zm00039ab151720_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab151730 Zm00039ab151730_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab151730 Zm00039ab151730_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab151730 Zm00039ab151730_P003 NA PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P002 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P002 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P003 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P003 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P004 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab151910 Zm00039ab151910_P004 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab152010 Zm00039ab152010_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.1.148-RXN EC-2.7.1.148 Zm00039ab152130 Zm00039ab152130_P003 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P002 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P003 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P004 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P005 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P006 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab152240 Zm00039ab152240_P007 conditional PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P001 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P002 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P002 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P003 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P003 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P004 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P004 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P004 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P005 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P005 viridiplantae PWY-5269 cardiolipin biosynthesis II PGPPHOSPHA-RXN EC-3.1.3.27 Zm00039ab152400 Zm00039ab152400_P005 viridiplantae PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P001 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P001 viridiplantae PWY-5269 cardiolipin biosynthesis II PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4392 EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P001 NA PWY4FS-8 phosphatidylglycerol biosynthesis II (non-plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P002 viridiplantae PWY4FS-7 phosphatidylglycerol biosynthesis I (plastidic) PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P002 viridiplantae PWY-5269 cardiolipin biosynthesis II PHOSPHAGLYPSYN-RXN EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4392 EC-2.7.8.5 Zm00039ab152590 Zm00039ab152590_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab152690 Zm00039ab152690_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab152690 Zm00039ab152690_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab152690 Zm00039ab152690_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab152700 Zm00039ab152700_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab152880 Zm00039ab152880_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab152980 Zm00039ab152980_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab152980 Zm00039ab152980_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab152980 Zm00039ab152980_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab152980 Zm00039ab152980_P004 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab153010 Zm00039ab153010_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab153030 Zm00039ab153030_P003 NA PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P001 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P002 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P003 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P003 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P004 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P004 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P005 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P005 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.1.152-RXN EC-2.7.4.21 Zm00039ab153180 Zm00039ab153180_P006 conditional PWY-6369 inositol diphosphates biosynthesis 2.7.4.24-RXN EC-2.7.4.24 Zm00039ab153180 Zm00039ab153180_P006 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab153240 Zm00039ab153240_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab153240 Zm00039ab153240_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab153240 Zm00039ab153240_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab153240 Zm00039ab153240_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab153310 Zm00039ab153310_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab153310 Zm00039ab153310_P002 viridiplantae PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab153350 Zm00039ab153350_P001 ubiquitous PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab153360 Zm00039ab153360_P001 ubiquitous PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00039ab153560 Zm00039ab153560_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab153630 Zm00039ab153630_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab153710 Zm00039ab153710_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab153710 Zm00039ab153710_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab153710 Zm00039ab153710_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab153780 Zm00039ab153780_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab153780 Zm00039ab153780_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab153780 Zm00039ab153780_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P006 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P007 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P008 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab153980 Zm00039ab153980_P009 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab154020 Zm00039ab154020_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab154020 Zm00039ab154020_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab154020 Zm00039ab154020_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab154020 Zm00039ab154020_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P004 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P004 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P004 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P004 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P004 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P005 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P005 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P005 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P005 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab154030 Zm00039ab154030_P005 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P003 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab154160 Zm00039ab154160_P004 NA PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab154270 Zm00039ab154270_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab154380 Zm00039ab154380_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab154380 Zm00039ab154380_P004 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab154400 Zm00039ab154400_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab154510 Zm00039ab154510_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab154510 Zm00039ab154510_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab154510 Zm00039ab154510_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab154510 Zm00039ab154510_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab154510 Zm00039ab154510_P005 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13643 EC-1.13.11.69 Zm00039ab154520 Zm00039ab154520_P001 conditional PWY-6806 carotenoid cleavage RXN-12393 EC-1.13.11.70 Zm00039ab154520 Zm00039ab154520_P001 expected PWY-5686 UMP biosynthesis I DIHYDROOROT-RXN EC-3.5.2.3 Zm00039ab154560 Zm00039ab154560_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab154760 Zm00039ab154760_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab154760 Zm00039ab154760_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab154760 Zm00039ab154760_P003 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab154780 Zm00039ab154780_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab154780 Zm00039ab154780_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab154780 Zm00039ab154780_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab154780 Zm00039ab154780_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab154790 Zm00039ab154790_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab154790 Zm00039ab154790_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab154870 Zm00039ab154870_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab154960 Zm00039ab154960_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab154960 Zm00039ab154960_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab154960 Zm00039ab154960_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab154960 Zm00039ab154960_P002 viridiplantae NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00039ab154980 Zm00039ab154980_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis LIPIDADISACCHARIDESYNTH-RXN EC-2.4.1.182 Zm00039ab154980 Zm00039ab154980_P002 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab155000 Zm00039ab155000_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab155090 Zm00039ab155090_P001 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab155200 Zm00039ab155200_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab155460 Zm00039ab155460_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab155510 Zm00039ab155510_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab155510 Zm00039ab155510_P002 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00039ab155900 Zm00039ab155900_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab155990 Zm00039ab155990_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab155990 Zm00039ab155990_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab155990 Zm00039ab155990_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab156080 Zm00039ab156080_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab156080 Zm00039ab156080_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab156080 Zm00039ab156080_P001 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab156140 Zm00039ab156140_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P003 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab156160 Zm00039ab156160_P004 manual PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab156190 Zm00039ab156190_P003 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00039ab156220 Zm00039ab156220_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab156370 Zm00039ab156370_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab156370 Zm00039ab156370_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab156460 Zm00039ab156460_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab156460 Zm00039ab156460_P001 viridiplantae XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab156530 Zm00039ab156530_P001 expected PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab156590 Zm00039ab156590_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00039ab156610 Zm00039ab156610_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab156610 Zm00039ab156610_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab156610 Zm00039ab156610_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab156670 Zm00039ab156670_P001 viridiplantae PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00039ab156880 Zm00039ab156880_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00039ab156880 Zm00039ab156880_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00039ab156880 Zm00039ab156880_P001 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab156900 Zm00039ab156900_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab156900 Zm00039ab156900_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab156900 Zm00039ab156900_P001 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab156900 Zm00039ab156900_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab156900 Zm00039ab156900_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab156900 Zm00039ab156900_P002 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab156910 Zm00039ab156910_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab156940 Zm00039ab156940_P005 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab157010 Zm00039ab157010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab157010 Zm00039ab157010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab157010 Zm00039ab157010_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab157020 Zm00039ab157020_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab157020 Zm00039ab157020_P001 conditional PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab157090 Zm00039ab157090_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab157090 Zm00039ab157090_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab157090 Zm00039ab157090_P003 expected PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab157340 Zm00039ab157340_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab157340 Zm00039ab157340_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab157340 Zm00039ab157340_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab157340 Zm00039ab157340_P001 viridiplantae PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P001 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P001 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P002 expected PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P003 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab157410 Zm00039ab157410_P003 expected PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab157540 Zm00039ab157540_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab157540 Zm00039ab157540_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab157760 Zm00039ab157760_P004 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab157900 Zm00039ab157900_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab157900 Zm00039ab157900_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab157980 Zm00039ab157980_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158000 Zm00039ab158000_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158000 Zm00039ab158000_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158000 Zm00039ab158000_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158010 Zm00039ab158010_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158020 Zm00039ab158020_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158020 Zm00039ab158020_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158020 Zm00039ab158020_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158050 Zm00039ab158050_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158050 Zm00039ab158050_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158050 Zm00039ab158050_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158060 Zm00039ab158060_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158060 Zm00039ab158060_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158060 Zm00039ab158060_P001 conditional PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab158260 Zm00039ab158260_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00039ab158260 Zm00039ab158260_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab158380 Zm00039ab158380_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab158380 Zm00039ab158380_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab158380 Zm00039ab158380_P001 conditional PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab158480 Zm00039ab158480_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab158480 Zm00039ab158480_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab158480 Zm00039ab158480_P003 ubiquitous GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab158540 Zm00039ab158540_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab158570 Zm00039ab158570_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab158570 Zm00039ab158570_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab158570 Zm00039ab158570_P001 expected PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab158600 Zm00039ab158600_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab158730 Zm00039ab158730_P001 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab158850 Zm00039ab158850_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab158850 Zm00039ab158850_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab158850 Zm00039ab158850_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab158850 Zm00039ab158850_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab159040 Zm00039ab159040_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab159040 Zm00039ab159040_P002 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab159210 Zm00039ab159210_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab159250 Zm00039ab159250_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab159250 Zm00039ab159250_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab159250 Zm00039ab159250_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab159330 Zm00039ab159330_P001 viridiplantae PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00039ab159460 Zm00039ab159460_P001 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00039ab159460 Zm00039ab159460_P002 conditional PWY-7158 L-phenylalanine degradation V RXN-13908 EC-4.2.1.96 Zm00039ab159460 Zm00039ab159460_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab159510 Zm00039ab159510_P004 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab159660 Zm00039ab159660_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab159660 Zm00039ab159660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab159660 Zm00039ab159660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab159660 Zm00039ab159660_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab159670 Zm00039ab159670_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab159720 Zm00039ab159720_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab159720 Zm00039ab159720_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab159730 Zm00039ab159730_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab159730 Zm00039ab159730_P002 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab159840 Zm00039ab159840_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab159840 Zm00039ab159840_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab159850 Zm00039ab159850_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab159880 Zm00039ab159880_P001 NA PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab159890 Zm00039ab159890_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab159890 Zm00039ab159890_P002 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab159890 Zm00039ab159890_P003 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab159890 Zm00039ab159890_P004 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab159890 Zm00039ab159890_P005 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab159930 Zm00039ab159930_P005 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab160020 Zm00039ab160020_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab160020 Zm00039ab160020_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab160020 Zm00039ab160020_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab160020 Zm00039ab160020_P002 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab160070 Zm00039ab160070_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab160070 Zm00039ab160070_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab160070 Zm00039ab160070_P002 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab160070 Zm00039ab160070_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160080 Zm00039ab160080_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab160130 Zm00039ab160130_P002 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160150 Zm00039ab160150_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160150 Zm00039ab160150_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160150 Zm00039ab160150_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160160 Zm00039ab160160_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160160 Zm00039ab160160_P002 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160160 Zm00039ab160160_P003 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160160 Zm00039ab160160_P004 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160180 Zm00039ab160180_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160190 Zm00039ab160190_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160200 Zm00039ab160200_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab160200 Zm00039ab160200_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab160210 Zm00039ab160210_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab160210 Zm00039ab160210_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab160220 Zm00039ab160220_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab160220 Zm00039ab160220_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab160290 Zm00039ab160290_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab160290 Zm00039ab160290_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab160360 Zm00039ab160360_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab160360 Zm00039ab160360_P001 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab160600 Zm00039ab160600_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab160600 Zm00039ab160600_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab160600 Zm00039ab160600_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab160600 Zm00039ab160600_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab160610 Zm00039ab160610_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab160610 Zm00039ab160610_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab160610 Zm00039ab160610_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab160610 Zm00039ab160610_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab160620 Zm00039ab160620_P004 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab160670 Zm00039ab160670_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab160670 Zm00039ab160670_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab160690 Zm00039ab160690_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab160690 Zm00039ab160690_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab160700 Zm00039ab160700_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab160700 Zm00039ab160700_P002 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00039ab160720 Zm00039ab160720_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab160720 Zm00039ab160720_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab160720 Zm00039ab160720_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00039ab160720 Zm00039ab160720_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00039ab160720 Zm00039ab160720_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00039ab160720 Zm00039ab160720_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab160780 Zm00039ab160780_P001 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P005 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab160900 Zm00039ab160900_P006 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab160980 Zm00039ab160980_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab160980 Zm00039ab160980_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab160980 Zm00039ab160980_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab160980 Zm00039ab160980_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab161010 Zm00039ab161010_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab161010 Zm00039ab161010_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab161010 Zm00039ab161010_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab161010 Zm00039ab161010_P001 NA PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab161320 Zm00039ab161320_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab161320 Zm00039ab161320_P002 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab161440 Zm00039ab161440_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab161550 Zm00039ab161550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab161550 Zm00039ab161550_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P004 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab161620 Zm00039ab161620_P005 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab161670 Zm00039ab161670_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab161670 Zm00039ab161670_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab161670 Zm00039ab161670_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab161670 Zm00039ab161670_P004 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab161670 Zm00039ab161670_P005 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab161750 Zm00039ab161750_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab161750 Zm00039ab161750_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab161750 Zm00039ab161750_P003 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab161750 Zm00039ab161750_P004 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab161920 Zm00039ab161920_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab161920 Zm00039ab161920_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab161920 Zm00039ab161920_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab161920 Zm00039ab161920_P001 NA PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab162060 Zm00039ab162060_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab162410 Zm00039ab162410_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab162420 Zm00039ab162420_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162590 Zm00039ab162590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162630 Zm00039ab162630_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162630 Zm00039ab162630_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162630 Zm00039ab162630_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162630 Zm00039ab162630_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab162760 Zm00039ab162760_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab162760 Zm00039ab162760_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab162760 Zm00039ab162760_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162780 Zm00039ab162780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162780 Zm00039ab162780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162780 Zm00039ab162780_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162780 Zm00039ab162780_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab162780 Zm00039ab162780_P005 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab162850 Zm00039ab162850_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab162890 Zm00039ab162890_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab162890 Zm00039ab162890_P001 viridiplantae PWY-5049 rosmarinic acid biosynthesis II TYROSINE-3-MONOOXYGENASE-RXN EC-1.14.16.2 Zm00039ab162950 Zm00039ab162950_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P002 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P003 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P003 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P004 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P005 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab163090 Zm00039ab163090_P005 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab163430 Zm00039ab163430_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab163440 Zm00039ab163440_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab163680 Zm00039ab163680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab163680 Zm00039ab163680_P002 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab163730 Zm00039ab163730_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab163880 Zm00039ab163880_P003 expected PWY-5704 urea degradation II UREASE-RXN EC-3.5.1.5 Zm00039ab164000 Zm00039ab164000_P001 ubiquitous GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00039ab164060 Zm00039ab164060_P001 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00039ab164060 Zm00039ab164060_P002 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00039ab164060 Zm00039ab164060_P003 expected GLUTSYNIII-PWY L-glutamate biosynthesis III GLUTDEHYD-RXN EC-1.4.1.4 Zm00039ab164060 Zm00039ab164060_P004 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab164160 Zm00039ab164160_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab164160 Zm00039ab164160_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab164160 Zm00039ab164160_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab164160 Zm00039ab164160_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab164210 Zm00039ab164210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab164210 Zm00039ab164210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab164210 Zm00039ab164210_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab164390 Zm00039ab164390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab164470 Zm00039ab164470_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab164480 Zm00039ab164480_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab164480 Zm00039ab164480_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab164480 Zm00039ab164480_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164570 Zm00039ab164570_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164570 Zm00039ab164570_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164570 Zm00039ab164570_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164570 Zm00039ab164570_P004 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164570 Zm00039ab164570_P005 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab164640 Zm00039ab164640_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab164640 Zm00039ab164640_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab164640 Zm00039ab164640_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab164670 Zm00039ab164670_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab164670 Zm00039ab164670_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab164670 Zm00039ab164670_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164710 Zm00039ab164710_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164710 Zm00039ab164710_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164710 Zm00039ab164710_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab164710 Zm00039ab164710_P004 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab164940 Zm00039ab164940_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab164940 Zm00039ab164940_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab164940 Zm00039ab164940_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab164940 Zm00039ab164940_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab164970 Zm00039ab164970_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab164990 Zm00039ab164990_P001 viridiplantae PWY-5139 pelargonidin conjugates biosynthesis RXN-7832 EC-2.4.1.116 Zm00039ab165150 Zm00039ab165150_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00039ab165310 Zm00039ab165310_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00039ab165310 Zm00039ab165310_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab165480 Zm00039ab165480_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab165500 Zm00039ab165500_P001 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab165640 Zm00039ab165640_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab165640 Zm00039ab165640_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab165650 Zm00039ab165650_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab165650 Zm00039ab165650_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab165670 Zm00039ab165670_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab165670 Zm00039ab165670_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab165670 Zm00039ab165670_P001 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab165860 Zm00039ab165860_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab165910 Zm00039ab165910_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab165910 Zm00039ab165910_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab165910 Zm00039ab165910_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab165920 Zm00039ab165920_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab165920 Zm00039ab165920_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab165920 Zm00039ab165920_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab166050 Zm00039ab166050_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab166080 Zm00039ab166080_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab166080 Zm00039ab166080_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab166080 Zm00039ab166080_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab166080 Zm00039ab166080_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab166170 Zm00039ab166170_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab166610 Zm00039ab166610_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab166930 Zm00039ab166930_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab166940 Zm00039ab166940_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab166940 Zm00039ab166940_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab166940 Zm00039ab166940_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab166940 Zm00039ab166940_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab166960 Zm00039ab166960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab166960 Zm00039ab166960_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab166960 Zm00039ab166960_P003 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab167320 Zm00039ab167320_P001 ubiquitous PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab167390 Zm00039ab167390_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab167410 Zm00039ab167410_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab167410 Zm00039ab167410_P002 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab167530 Zm00039ab167530_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab167550 Zm00039ab167550_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab167550 Zm00039ab167550_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab167690 Zm00039ab167690_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab167690 Zm00039ab167690_P002 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab167750 Zm00039ab167750_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab167750 Zm00039ab167750_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab167750 Zm00039ab167750_P001 NA PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00039ab167810 Zm00039ab167810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab167820 Zm00039ab167820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab167820 Zm00039ab167820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab167820 Zm00039ab167820_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab167820 Zm00039ab167820_P002 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab167900 Zm00039ab167900_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab167920 Zm00039ab167920_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab167920 Zm00039ab167920_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab167920 Zm00039ab167920_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab167920 Zm00039ab167920_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab167920 Zm00039ab167920_P001 NA PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab168100 Zm00039ab168100_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab168100 Zm00039ab168100_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P002 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P003 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P004 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P006 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab168160 Zm00039ab168160_P007 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab168200 Zm00039ab168200_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab168640 Zm00039ab168640_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab168640 Zm00039ab168640_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab168640 Zm00039ab168640_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab168640 Zm00039ab168640_P004 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab168710 Zm00039ab168710_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab168710 Zm00039ab168710_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab168710 Zm00039ab168710_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab168710 Zm00039ab168710_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab168910 Zm00039ab168910_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab168910 Zm00039ab168910_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab168910 Zm00039ab168910_P001 NA PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168920 Zm00039ab168920_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168920 Zm00039ab168920_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168920 Zm00039ab168920_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168980 Zm00039ab168980_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168980 Zm00039ab168980_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab168980 Zm00039ab168980_P001 conditional PWY-6887 kauralexin biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab169000 Zm00039ab169000_P001 conditional PWY-5032 ent-kaurene biosynthesis I 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab169000 Zm00039ab169000_P001 ubiquitous PWY-2981 diterpene phytoalexins precursors biosynthesis 5.5.1.13-RXN EC-5.5.1.13 Zm00039ab169000 Zm00039ab169000_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab169130 Zm00039ab169130_P002 NA PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P001 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P002 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P002 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P002 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P002 expected PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P003 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P003 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P003 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab169270 Zm00039ab169270_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169390 Zm00039ab169390_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab169440 Zm00039ab169440_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab169440 Zm00039ab169440_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab169440 Zm00039ab169440_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab169510 Zm00039ab169510_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab169640 Zm00039ab169640_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab169640 Zm00039ab169640_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab169640 Zm00039ab169640_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P001 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P001 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P002 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P002 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P002 conditional PWY-5115 GDP-L-galactose biosynthesis RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P003 viridiplantae PWY4FS-13 extended VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P003 conditional PWY4FS-12 VTC2 cycle RXN-1882 EC-5.1.3.18 Zm00039ab169650 Zm00039ab169650_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab169770 Zm00039ab169770_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab169770 Zm00039ab169770_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab169770 Zm00039ab169770_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab169770 Zm00039ab169770_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab169770 Zm00039ab169770_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab169830 Zm00039ab169830_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab169830 Zm00039ab169830_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab169840 Zm00039ab169840_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab170100 Zm00039ab170100_P002 expected PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab170170 Zm00039ab170170_P003 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab170210 Zm00039ab170210_P001 expected PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00039ab170290 Zm00039ab170290_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00039ab170290 Zm00039ab170290_P002 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I 5.3.1.23-RXN EC-5.3.1.23 Zm00039ab170290 Zm00039ab170290_P003 ubiquitous PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab170380 Zm00039ab170380_P003 viridiplantae PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab170420 Zm00039ab170420_P005 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab170470 Zm00039ab170470_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab170490 Zm00039ab170490_P002 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00039ab170510 Zm00039ab170510_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab170520 Zm00039ab170520_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab170530 Zm00039ab170530_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab170530 Zm00039ab170530_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab170540 Zm00039ab170540_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab170540 Zm00039ab170540_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab170550 Zm00039ab170550_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab170550 Zm00039ab170550_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab170560 Zm00039ab170560_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab170560 Zm00039ab170560_P001 ubiquitous PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab170650 Zm00039ab170650_P003 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00039ab170680 Zm00039ab170680_P001 conditional PWY-6938 NADH repair 4.2.1.93-RXN EC-4.2.1.93 Zm00039ab170680 Zm00039ab170680_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab170760 Zm00039ab170760_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab171010 Zm00039ab171010_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab171230 Zm00039ab171230_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab171230 Zm00039ab171230_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab171230 Zm00039ab171230_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab171230 Zm00039ab171230_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab171300 Zm00039ab171300_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab171310 Zm00039ab171310_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab171310 Zm00039ab171310_P001 conditional PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab171320 Zm00039ab171320_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab171320 Zm00039ab171320_P001 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab171640 Zm00039ab171640_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab171640 Zm00039ab171640_P002 excluded PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00039ab171650 Zm00039ab171650_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00039ab171660 Zm00039ab171660_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab171720 Zm00039ab171720_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P002 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P002 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P002 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P003 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P003 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P003 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P004 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P004 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P004 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P004 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P005 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P005 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P005 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P005 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P005 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P005 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P005 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P006 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P006 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P006 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P006 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P006 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P006 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P006 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P006 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P007 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P007 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P007 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P007 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P007 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P007 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P007 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P007 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P008 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P008 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P008 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P008 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P008 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P008 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P008 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P008 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P009 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P009 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P009 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P009 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P009 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P009 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P009 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P009 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P010 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P010 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab171730 Zm00039ab171730_P010 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P010 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P010 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P010 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P010 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab171730 Zm00039ab171730_P010 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R145-RXN EC-4.2.1.109 Zm00039ab171760 Zm00039ab171760_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab171790 Zm00039ab171790_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab171820 Zm00039ab171820_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab171840 Zm00039ab171840_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab171890 Zm00039ab171890_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab171890 Zm00039ab171890_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab171890 Zm00039ab171890_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab171890 Zm00039ab171890_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab171930 Zm00039ab171930_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab172080 Zm00039ab172080_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab172080 Zm00039ab172080_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab172080 Zm00039ab172080_P003 expected PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P001 excluded PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P002 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P002 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P002 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P002 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab172150 Zm00039ab172150_P002 excluded PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P001 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P001 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P002 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P002 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P003 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P003 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P004 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P004 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P005 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P005 ubiquitous PWY-5041 S-adenosyl-L-methionine cycle II ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P006 viridiplantae METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) ADENOSYLHOMOCYSTEINASE-RXN EC-3.3.1.1 Zm00039ab172200 Zm00039ab172200_P006 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab172410 Zm00039ab172410_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab172410 Zm00039ab172410_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab172430 Zm00039ab172430_P001 viridiplantae PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00039ab172460 Zm00039ab172460_P001 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00039ab172460 Zm00039ab172460_P002 conditional PWY-6950 DIMBOA-glucoside biosynthesis RXN-6687 EC-2.1.1.241 Zm00039ab172460 Zm00039ab172460_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab172490 Zm00039ab172490_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab172490 Zm00039ab172490_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab172490 Zm00039ab172490_P001 conditional PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00039ab172540 Zm00039ab172540_P001 ubiquitous PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00039ab172540 Zm00039ab172540_P002 ubiquitous PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab172550 Zm00039ab172550_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab172550 Zm00039ab172550_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab172870 Zm00039ab172870_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab172930 Zm00039ab172930_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab172930 Zm00039ab172930_P002 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab172970 Zm00039ab172970_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab172970 Zm00039ab172970_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00039ab173080 Zm00039ab173080_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00039ab173080 Zm00039ab173080_P002 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P002 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P003 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab173340 Zm00039ab173340_P003 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P003 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab173340 Zm00039ab173340_P003 expected PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab173480 Zm00039ab173480_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab173480 Zm00039ab173480_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab173550 Zm00039ab173550_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab173830 Zm00039ab173830_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab173830 Zm00039ab173830_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab173830 Zm00039ab173830_P003 NA PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab173940 Zm00039ab173940_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P003 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P004 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab174200 Zm00039ab174200_P004 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab174250 Zm00039ab174250_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab174250 Zm00039ab174250_P002 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00039ab174400 Zm00039ab174400_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00039ab174400 Zm00039ab174400_P002 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00039ab174420 Zm00039ab174420_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1104 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 expected PWY-7186 superpathway of scopolin and esculin biosynthesis RXN-1104 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 NA PWY-361 phenylpropanoid biosynthesis RXN-1143 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 conditional PWY-5868 simple coumarins biosynthesis RXN-1104 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 NA PWY-2181 free phenylpropanoid acid biosynthesis RXN-1104 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 conditional PWY-5168 ferulate and sinapate biosynthesis RXN-1143 EC-2.1.1.68 Zm00039ab174440 Zm00039ab174440_P001 conditional PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P001 viridiplantae PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P002 viridiplantae PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab174620 Zm00039ab174620_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab174720 Zm00039ab174720_P003 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab174820 Zm00039ab174820_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab174820 Zm00039ab174820_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab174820 Zm00039ab174820_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab174860 Zm00039ab174860_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab174860 Zm00039ab174860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab174870 Zm00039ab174870_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00039ab174870 Zm00039ab174870_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00039ab174950 Zm00039ab174950_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab174980 Zm00039ab174980_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab174980 Zm00039ab174980_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab174980 Zm00039ab174980_P003 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab175020 Zm00039ab175020_P001 conditional PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab175060 Zm00039ab175060_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab175100 Zm00039ab175100_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab175100 Zm00039ab175100_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab175100 Zm00039ab175100_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab175100 Zm00039ab175100_P001 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab175310 Zm00039ab175310_P004 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab175370 Zm00039ab175370_P003 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab175980 Zm00039ab175980_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab175980 Zm00039ab175980_P001 conditional PWY-5098 chlorophyll a degradation I 3.1.1.82-RXN EC-3.1.1.82 Zm00039ab176010 Zm00039ab176010_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab176180 Zm00039ab176180_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab176240 Zm00039ab176240_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab176240 Zm00039ab176240_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab176240 Zm00039ab176240_P003 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab176440 Zm00039ab176440_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab176440 Zm00039ab176440_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab176710 Zm00039ab176710_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab176710 Zm00039ab176710_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab176830 Zm00039ab176830_P001 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab176970 Zm00039ab176970_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab176970 Zm00039ab176970_P002 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00039ab177260 Zm00039ab177260_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P003 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P003 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P004 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P004 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P004 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P004 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P005 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P005 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P005 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab177470 Zm00039ab177470_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab177500 Zm00039ab177500_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab177500 Zm00039ab177500_P002 NA THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab177510 Zm00039ab177510_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab177510 Zm00039ab177510_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00039ab177520 Zm00039ab177520_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab177820 Zm00039ab177820_P002 conditional VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab177840 Zm00039ab177840_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab177840 Zm00039ab177840_P001 viridiplantae VALSYN-PWY L-valine biosynthesis DIHYDROXYISOVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab177840 Zm00039ab177840_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) DIHYDROXYMETVALDEHYDRAT-RXN EC-4.2.1.9 Zm00039ab177840 Zm00039ab177840_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab177980 Zm00039ab177980_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab177980 Zm00039ab177980_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab177980 Zm00039ab177980_P001 expected PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab177990 Zm00039ab177990_P004 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab178050 Zm00039ab178050_P001 viridiplantae PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00039ab178070 Zm00039ab178070_P001 ubiquitous PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P002 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P003 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P004 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab178160 Zm00039ab178160_P004 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab178170 Zm00039ab178170_P001 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab178260 Zm00039ab178260_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab178260 Zm00039ab178260_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab178260 Zm00039ab178260_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab178310 Zm00039ab178310_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab178310 Zm00039ab178310_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab178380 Zm00039ab178380_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab178380 Zm00039ab178380_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab178400 Zm00039ab178400_P002 expected PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P001 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P002 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P003 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P004 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P005 conditional PWY-4702 phytate degradation I RXN0-1001 EC-3.1.3.8 Zm00039ab178640 Zm00039ab178640_P006 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab178690 Zm00039ab178690_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab178690 Zm00039ab178690_P002 viridiplantae PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab178730 Zm00039ab178730_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab178730 Zm00039ab178730_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab178920 Zm00039ab178920_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab178970 Zm00039ab178970_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab179120 Zm00039ab179120_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab179140 Zm00039ab179140_P001 expected PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab179300 Zm00039ab179300_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab179420 Zm00039ab179420_P003 conditional HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab179480 Zm00039ab179480_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179480 Zm00039ab179480_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179480 Zm00039ab179480_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab179490 Zm00039ab179490_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179490 Zm00039ab179490_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179490 Zm00039ab179490_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab179490 Zm00039ab179490_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179490 Zm00039ab179490_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab179490 Zm00039ab179490_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab179630 Zm00039ab179630_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab179630 Zm00039ab179630_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab179630 Zm00039ab179630_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab179630 Zm00039ab179630_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab179640 Zm00039ab179640_P001 expected PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00039ab179730 Zm00039ab179730_P001 conditional PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00039ab179730 Zm00039ab179730_P002 conditional PWY-5530 sorbitol biosynthesis II GLUCONOKIN-RXN EC-2.7.1.12 Zm00039ab179730 Zm00039ab179730_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab179740 Zm00039ab179740_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab179900 Zm00039ab179900_P001 expected PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00039ab180050 Zm00039ab180050_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab180120 Zm00039ab180120_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab180120 Zm00039ab180120_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab180120 Zm00039ab180120_P001 manual PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab180260 Zm00039ab180260_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab180260 Zm00039ab180260_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab180360 Zm00039ab180360_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab180370 Zm00039ab180370_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab180400 Zm00039ab180400_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab180790 Zm00039ab180790_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab181000 Zm00039ab181000_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab181000 Zm00039ab181000_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab181000 Zm00039ab181000_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab181000 Zm00039ab181000_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab181000 Zm00039ab181000_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab181000 Zm00039ab181000_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab181000 Zm00039ab181000_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab181000 Zm00039ab181000_P004 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab181180 Zm00039ab181180_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab181180 Zm00039ab181180_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab181180 Zm00039ab181180_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab181190 Zm00039ab181190_P001 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P001 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P002 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P002 viridiplantae PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P003 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00039ab181280 Zm00039ab181280_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab181320 Zm00039ab181320_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab181320 Zm00039ab181320_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab181320 Zm00039ab181320_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab181320 Zm00039ab181320_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLCROTONYL-COA-CARBOXYLASE-RXN EC-6.4.1.4 Zm00039ab181320 Zm00039ab181320_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab181330 Zm00039ab181330_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab181330 Zm00039ab181330_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab181330 Zm00039ab181330_P003 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab181330 Zm00039ab181330_P004 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab181500 Zm00039ab181500_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab181660 Zm00039ab181660_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P004 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab181810 Zm00039ab181810_P005 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab181860 Zm00039ab181860_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab181860 Zm00039ab181860_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab181860 Zm00039ab181860_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab181890 Zm00039ab181890_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 1.2.1.9-RXN EC-1.2.1.9 Zm00039ab181920 Zm00039ab181920_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab182010 Zm00039ab182010_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab182010 Zm00039ab182010_P001 viridiplantae PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab182040 Zm00039ab182040_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab182040 Zm00039ab182040_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab182040 Zm00039ab182040_P001 excluded PWY-7199 pyrimidine deoxyribonucleosides salvage THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab182040 Zm00039ab182040_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab182040 Zm00039ab182040_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab182040 Zm00039ab182040_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab182040 Zm00039ab182040_P001 NA PWY-3841 folate transformations II THYMIDYLATESYN-RXN EC-2.1.1.45 Zm00039ab182040 Zm00039ab182040_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P004 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P005 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P005 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P005 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P006 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P006 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182200 Zm00039ab182200_P006 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182210 Zm00039ab182210_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182210 Zm00039ab182210_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab182210 Zm00039ab182210_P001 ubiquitous PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab182260 Zm00039ab182260_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab182260 Zm00039ab182260_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab182260 Zm00039ab182260_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab182390 Zm00039ab182390_P002 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab182560 Zm00039ab182560_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab182560 Zm00039ab182560_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab182560 Zm00039ab182560_P001 NA PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab182570 Zm00039ab182570_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab182570 Zm00039ab182570_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab182740 Zm00039ab182740_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab182740 Zm00039ab182740_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab182750 Zm00039ab182750_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab182750 Zm00039ab182750_P001 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab182760 Zm00039ab182760_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab183040 Zm00039ab183040_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab183040 Zm00039ab183040_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab183040 Zm00039ab183040_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab183050 Zm00039ab183050_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab183050 Zm00039ab183050_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab183140 Zm00039ab183140_P004 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P005 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab183650 Zm00039ab183650_P006 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab184320 Zm00039ab184320_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab184330 Zm00039ab184330_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab184330 Zm00039ab184330_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab184330 Zm00039ab184330_P001 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab184590 Zm00039ab184590_P001 conditional PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab184900 Zm00039ab184900_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab184900 Zm00039ab184900_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab184900 Zm00039ab184900_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P003 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P004 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab185000 Zm00039ab185000_P005 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab185190 Zm00039ab185190_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab185190 Zm00039ab185190_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab185190 Zm00039ab185190_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab185190 Zm00039ab185190_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab185190 Zm00039ab185190_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab185190 Zm00039ab185190_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab185190 Zm00039ab185190_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab185190 Zm00039ab185190_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab185190 Zm00039ab185190_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab185190 Zm00039ab185190_P005 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00039ab185340 Zm00039ab185340_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab185430 Zm00039ab185430_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab185430 Zm00039ab185430_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab185430 Zm00039ab185430_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab185460 Zm00039ab185460_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab185460 Zm00039ab185460_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab185460 Zm00039ab185460_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab185530 Zm00039ab185530_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab185850 Zm00039ab185850_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab185940 Zm00039ab185940_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab185970 Zm00039ab185970_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab185970 Zm00039ab185970_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186000 Zm00039ab186000_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186090 Zm00039ab186090_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186120 Zm00039ab186120_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186120 Zm00039ab186120_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab186150 Zm00039ab186150_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab186160 Zm00039ab186160_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab186240 Zm00039ab186240_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186270 Zm00039ab186270_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186270 Zm00039ab186270_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186280 Zm00039ab186280_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186280 Zm00039ab186280_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186340 Zm00039ab186340_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186350 Zm00039ab186350_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186370 Zm00039ab186370_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186390 Zm00039ab186390_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186390 Zm00039ab186390_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186400 Zm00039ab186400_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186400 Zm00039ab186400_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186520 Zm00039ab186520_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186520 Zm00039ab186520_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186530 Zm00039ab186530_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186530 Zm00039ab186530_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186600 Zm00039ab186600_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186680 Zm00039ab186680_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186680 Zm00039ab186680_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186690 Zm00039ab186690_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186690 Zm00039ab186690_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186840 Zm00039ab186840_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186840 Zm00039ab186840_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186880 Zm00039ab186880_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186890 Zm00039ab186890_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186900 Zm00039ab186900_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186960 Zm00039ab186960_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab186960 Zm00039ab186960_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab186970 Zm00039ab186970_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab186990 Zm00039ab186990_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187000 Zm00039ab187000_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187010 Zm00039ab187010_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187050 Zm00039ab187050_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187060 Zm00039ab187060_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187090 Zm00039ab187090_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187100 Zm00039ab187100_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187110 Zm00039ab187110_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187120 Zm00039ab187120_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187140 Zm00039ab187140_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187170 Zm00039ab187170_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab187180 Zm00039ab187180_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab187250 Zm00039ab187250_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab187250 Zm00039ab187250_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab187420 Zm00039ab187420_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab187580 Zm00039ab187580_P002 NA PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab187630 Zm00039ab187630_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab187630 Zm00039ab187630_P002 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab187770 Zm00039ab187770_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab187770 Zm00039ab187770_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab187770 Zm00039ab187770_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab187800 Zm00039ab187800_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab187860 Zm00039ab187860_P003 expected VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab188000 Zm00039ab188000_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab188120 Zm00039ab188120_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab188120 Zm00039ab188120_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188130 Zm00039ab188130_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188130 Zm00039ab188130_P002 NA PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.71-RXN EC-2.1.1.71 Zm00039ab188160 Zm00039ab188160_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.71-RXN EC-2.1.1.71 Zm00039ab188160 Zm00039ab188160_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV RXN4FS-2 EC-2.1.1.71 Zm00039ab188160 Zm00039ab188160_P001 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188210 Zm00039ab188210_P003 NA PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P001 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P002 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P003 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P004 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P005 viridiplantae PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab188250 Zm00039ab188250_P006 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188590 Zm00039ab188590_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188590 Zm00039ab188590_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188590 Zm00039ab188590_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab188590 Zm00039ab188590_P004 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab188620 Zm00039ab188620_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab188620 Zm00039ab188620_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab188620 Zm00039ab188620_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab188620 Zm00039ab188620_P002 NA PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab188630 Zm00039ab188630_P001 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab188630 Zm00039ab188630_P002 conditional PWY-2724 alkane oxidation RXN-4444 EC-1.1.3.20 Zm00039ab188630 Zm00039ab188630_P003 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab188730 Zm00039ab188730_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab188820 Zm00039ab188820_P001 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab189040 Zm00039ab189040_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab189040 Zm00039ab189040_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab189040 Zm00039ab189040_P001 NA PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab189190 Zm00039ab189190_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab189190 Zm00039ab189190_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00039ab189190 Zm00039ab189190_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P001 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P002 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P004 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab189260 Zm00039ab189260_P005 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab189440 Zm00039ab189440_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P002 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P003 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P004 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P005 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab189600 Zm00039ab189600_P005 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab189870 Zm00039ab189870_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab189870 Zm00039ab189870_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab189870 Zm00039ab189870_P001 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab189970 Zm00039ab189970_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab189970 Zm00039ab189970_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab189970 Zm00039ab189970_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab189970 Zm00039ab189970_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab189970 Zm00039ab189970_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab190010 Zm00039ab190010_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab190090 Zm00039ab190090_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab190090 Zm00039ab190090_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab190090 Zm00039ab190090_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab190090 Zm00039ab190090_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab190230 Zm00039ab190230_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00039ab190270 Zm00039ab190270_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00039ab190270 Zm00039ab190270_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00039ab190270 Zm00039ab190270_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7799 EC-2.7.1.138 Zm00039ab190270 Zm00039ab190270_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab190320 Zm00039ab190320_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab190320 Zm00039ab190320_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab190330 Zm00039ab190330_P001 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab190350 Zm00039ab190350_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLGLUTKIN-RXN EC-2.7.2.8 Zm00039ab190350 Zm00039ab190350_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab190550 Zm00039ab190550_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab190640 Zm00039ab190640_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab190640 Zm00039ab190640_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P003 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P003 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab190640 Zm00039ab190640_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P004 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab190640 Zm00039ab190640_P004 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab190770 Zm00039ab190770_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab190780 Zm00039ab190780_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab190960 Zm00039ab190960_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab191230 Zm00039ab191230_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab191230 Zm00039ab191230_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab191230 Zm00039ab191230_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab191230 Zm00039ab191230_P001 expected PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab191240 Zm00039ab191240_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab191340 Zm00039ab191340_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00039ab191400 Zm00039ab191400_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00039ab191400 Zm00039ab191400_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I RXN0-302 EC-4.6.1.12 Zm00039ab191400 Zm00039ab191400_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II RXN0-302 EC-4.6.1.12 Zm00039ab191400 Zm00039ab191400_P002 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-10451 EC-2.8.2.39 Zm00039ab191550 Zm00039ab191550_P001 expected PWY-6235 hydroxyjasmonate sulfate biosynthesis RXN-10451 EC-2.8.2.39 Zm00039ab191550 Zm00039ab191550_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab191650 Zm00039ab191650_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab191650 Zm00039ab191650_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P002 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P003 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab192120 Zm00039ab192120_P004 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192130 Zm00039ab192130_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192130 Zm00039ab192130_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192130 Zm00039ab192130_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab192300 Zm00039ab192300_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab192300 Zm00039ab192300_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192360 Zm00039ab192360_P001 NA CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab192400 Zm00039ab192400_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab192420 Zm00039ab192420_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab192420 Zm00039ab192420_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab192420 Zm00039ab192420_P003 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab192430 Zm00039ab192430_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab192450 Zm00039ab192450_P001 NA PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00039ab192520 Zm00039ab192520_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00039ab192520 Zm00039ab192520_P002 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192560 Zm00039ab192560_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab192590 Zm00039ab192590_P003 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab192590 Zm00039ab192590_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192720 Zm00039ab192720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192730 Zm00039ab192730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab192740 Zm00039ab192740_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab192780 Zm00039ab192780_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab192780 Zm00039ab192780_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab192780 Zm00039ab192780_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab192780 Zm00039ab192780_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192810 Zm00039ab192810_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192810 Zm00039ab192810_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192810 Zm00039ab192810_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab192810 Zm00039ab192810_P004 NA PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab193070 Zm00039ab193070_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab193090 Zm00039ab193090_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab193100 Zm00039ab193100_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab193100 Zm00039ab193100_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab193130 Zm00039ab193130_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab193130 Zm00039ab193130_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab193130 Zm00039ab193130_P001 NA PWY-5068 chlorophyll cycle RXN-7679 EC-1.17.7.2 Zm00039ab193210 Zm00039ab193210_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab193320 Zm00039ab193320_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab193400 Zm00039ab193400_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab193400 Zm00039ab193400_P003 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab193420 Zm00039ab193420_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab193420 Zm00039ab193420_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOSAMINEPNACETYLTRANS-RXN EC-2.3.1.4 Zm00039ab193440 Zm00039ab193440_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab193560 Zm00039ab193560_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab194060 Zm00039ab194060_P002 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab194130 Zm00039ab194130_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab194250 Zm00039ab194250_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab194250 Zm00039ab194250_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab194250 Zm00039ab194250_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab194390 Zm00039ab194390_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab194390 Zm00039ab194390_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab194440 Zm00039ab194440_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab194440 Zm00039ab194440_P002 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab194470 Zm00039ab194470_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab194580 Zm00039ab194580_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab194730 Zm00039ab194730_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab194740 Zm00039ab194740_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab194740 Zm00039ab194740_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab194740 Zm00039ab194740_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab194740 Zm00039ab194740_P004 expected PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00039ab194840 Zm00039ab194840_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P006 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P007 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P007 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9230 EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P008 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.5.1.39-RXN EC-2.5.1.39 Zm00039ab194850 Zm00039ab194850_P008 expected PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab195210 Zm00039ab195210_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab195210 Zm00039ab195210_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab195240 Zm00039ab195240_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab195270 Zm00039ab195270_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab195270 Zm00039ab195270_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab195340 Zm00039ab195340_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab195340 Zm00039ab195340_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P001 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P004 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P004 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P005 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P005 ubiquitous PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P006 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab195390 Zm00039ab195390_P006 ubiquitous PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00039ab195560 Zm00039ab195560_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00039ab195560 Zm00039ab195560_P001 expected PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00039ab195560 Zm00039ab195560_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde NICONUCADENYLYLTRAN-RXN EC-2.7.7.18 Zm00039ab195560 Zm00039ab195560_P001 excluded PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab195600 Zm00039ab195600_P001 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab195640 Zm00039ab195640_P001 conditional GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab195660 Zm00039ab195660_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab195660 Zm00039ab195660_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab195660 Zm00039ab195660_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab195660 Zm00039ab195660_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab195660 Zm00039ab195660_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab195900 Zm00039ab195900_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab195900 Zm00039ab195900_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab195900 Zm00039ab195900_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab196240 Zm00039ab196240_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab196240 Zm00039ab196240_P001 expected PWY-5307 gentiodelphin biosynthesis RXN-8233 EC-2.3.1.153 Zm00039ab196500 Zm00039ab196500_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab196550 Zm00039ab196550_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab196580 Zm00039ab196580_P003 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab196600 Zm00039ab196600_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab196600 Zm00039ab196600_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab196600 Zm00039ab196600_P003 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab196710 Zm00039ab196710_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab196710 Zm00039ab196710_P001 expected LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab196940 Zm00039ab196940_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab196940 Zm00039ab196940_P001 NA PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab197070 Zm00039ab197070_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab197080 Zm00039ab197080_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab197080 Zm00039ab197080_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab197080 Zm00039ab197080_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab197080 Zm00039ab197080_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P003 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P004 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P004 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P004 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P005 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P005 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab197170 Zm00039ab197170_P005 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P005 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab197180 Zm00039ab197180_P005 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab197390 Zm00039ab197390_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab197390 Zm00039ab197390_P002 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab197520 Zm00039ab197520_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab197710 Zm00039ab197710_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab197710 Zm00039ab197710_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab198030 Zm00039ab198030_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab198030 Zm00039ab198030_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab198030 Zm00039ab198030_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab198310 Zm00039ab198310_P001 expected PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P001 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P002 viridiplantae PWY66-399 gluconeogenesis III RXN-15513 EC-5.4.2.11 Zm00039ab198370 Zm00039ab198370_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab198480 Zm00039ab198480_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab198480 Zm00039ab198480_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00039ab198510 Zm00039ab198510_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab198630 Zm00039ab198630_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab198630 Zm00039ab198630_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab198660 Zm00039ab198660_P001 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab198690 Zm00039ab198690_P001 viridiplantae PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab198710 Zm00039ab198710_P001 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab198850 Zm00039ab198850_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab198860 Zm00039ab198860_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab198880 Zm00039ab198880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab198880 Zm00039ab198880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab198880 Zm00039ab198880_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab198920 Zm00039ab198920_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab198920 Zm00039ab198920_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab198920 Zm00039ab198920_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab198940 Zm00039ab198940_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab199020 Zm00039ab199020_P001 expected PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00039ab199030 Zm00039ab199030_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00039ab199030 Zm00039ab199030_P002 NA PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P001 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P002 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P003 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P004 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P005 expected PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab199080 Zm00039ab199080_P006 expected PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00039ab199210 Zm00039ab199210_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P003 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab199250 Zm00039ab199250_P003 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab199310 Zm00039ab199310_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199350 Zm00039ab199350_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab199360 Zm00039ab199360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199360 Zm00039ab199360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab199360 Zm00039ab199360_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab199560 Zm00039ab199560_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab199560 Zm00039ab199560_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab199560 Zm00039ab199560_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab199570 Zm00039ab199570_P004 conditional PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00039ab199580 Zm00039ab199580_P001 expected PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00039ab199580 Zm00039ab199580_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199730 Zm00039ab199730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199730 Zm00039ab199730_P002 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab199740 Zm00039ab199740_P001 ubiquitous PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab199740 Zm00039ab199740_P002 ubiquitous PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab199820 Zm00039ab199820_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab199840 Zm00039ab199840_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab199840 Zm00039ab199840_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab199840 Zm00039ab199840_P001 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab199910 Zm00039ab199910_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199970 Zm00039ab199970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199970 Zm00039ab199970_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199970 Zm00039ab199970_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab199970 Zm00039ab199970_P004 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P005 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab199990 Zm00039ab199990_P006 NA PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00039ab200220 Zm00039ab200220_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab200300 Zm00039ab200300_P001 viridiplantae PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab200300 Zm00039ab200300_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab200350 Zm00039ab200350_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab200350 Zm00039ab200350_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab200350 Zm00039ab200350_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab200350 Zm00039ab200350_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab200350 Zm00039ab200350_P005 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab200400 Zm00039ab200400_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab200400 Zm00039ab200400_P002 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab200630 Zm00039ab200630_P001 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00039ab200680 Zm00039ab200680_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00039ab200680 Zm00039ab200680_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00039ab200680 Zm00039ab200680_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab200700 Zm00039ab200700_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab200700 Zm00039ab200700_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab200720 Zm00039ab200720_P005 NA PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab200750 Zm00039ab200750_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab200750 Zm00039ab200750_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab200750 Zm00039ab200750_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab200750 Zm00039ab200750_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab200780 Zm00039ab200780_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab200780 Zm00039ab200780_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab200780 Zm00039ab200780_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab200780 Zm00039ab200780_P001 viridiplantae PWY-6887 kauralexin biosynthesis RXN-12593 EC-4.2.3.103 Zm00039ab200850 Zm00039ab200850_P001 conditional PWY-7481 oryzalide A biosynthesis RXN-12593 EC-4.2.3.103 Zm00039ab200850 Zm00039ab200850_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab200860 Zm00039ab200860_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab200920 Zm00039ab200920_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab200920 Zm00039ab200920_P001 conditional PWYQT-4433 CA1P biosynthesis 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN EC-3.1.3.63 Zm00039ab200960 Zm00039ab200960_P001 NA PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab200970 Zm00039ab200970_P001 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab201140 Zm00039ab201140_P001 NA GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab201140 Zm00039ab201140_P002 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab201200 Zm00039ab201200_P004 expected CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab201440 Zm00039ab201440_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab201440 Zm00039ab201440_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab201550 Zm00039ab201550_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab201550 Zm00039ab201550_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab201550 Zm00039ab201550_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab201550 Zm00039ab201550_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab201650 Zm00039ab201650_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab201670 Zm00039ab201670_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab201680 Zm00039ab201680_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab201680 Zm00039ab201680_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab201990 Zm00039ab201990_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab201990 Zm00039ab201990_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab201990 Zm00039ab201990_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab201990 Zm00039ab201990_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab201990 Zm00039ab201990_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00039ab202010 Zm00039ab202010_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202030 Zm00039ab202030_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202050 Zm00039ab202050_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202050 Zm00039ab202050_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab202050 Zm00039ab202050_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab202050 Zm00039ab202050_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab202310 Zm00039ab202310_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab202310 Zm00039ab202310_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab202500 Zm00039ab202500_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab202500 Zm00039ab202500_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab202500 Zm00039ab202500_P003 excluded PWY-5640 nitrobenzene degradation II RXN-3661 EC-1.14.12.23 Zm00039ab203070 Zm00039ab203070_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab203130 Zm00039ab203130_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab203130 Zm00039ab203130_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab203130 Zm00039ab203130_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab203140 Zm00039ab203140_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab203140 Zm00039ab203140_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab203150 Zm00039ab203150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab203150 Zm00039ab203150_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab203180 Zm00039ab203180_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab203180 Zm00039ab203180_P002 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab203180 Zm00039ab203180_P003 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab203200 Zm00039ab203200_P001 expected PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab203300 Zm00039ab203300_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab203300 Zm00039ab203300_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab203330 Zm00039ab203330_P001 conditional GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab203410 Zm00039ab203410_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab203410 Zm00039ab203410_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab203410 Zm00039ab203410_P001 manual PWY18C3-22 methylsalicylate biosynthesis RXN-6723 EC-2.1.1.274 Zm00039ab203430 Zm00039ab203430_P002 NA PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6723 EC-2.1.1.274 Zm00039ab203430 Zm00039ab203430_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab203490 Zm00039ab203490_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab203490 Zm00039ab203490_P001 expected PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203610 Zm00039ab203610_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203610 Zm00039ab203610_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203610 Zm00039ab203610_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203610 Zm00039ab203610_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203610 Zm00039ab203610_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00039ab203610 Zm00039ab203610_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P001 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00039ab203620 Zm00039ab203620_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab203620 Zm00039ab203620_P002 NA PWY-5391 syringetin biosynthesis RXN-8451 EC-2.1.1.267 Zm00039ab203620 Zm00039ab203620_P002 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab203780 Zm00039ab203780_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab203850 Zm00039ab203850_P001 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab203880 Zm00039ab203880_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab204030 Zm00039ab204030_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab204030 Zm00039ab204030_P002 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab204270 Zm00039ab204270_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab204270 Zm00039ab204270_P002 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab204270 Zm00039ab204270_P003 ubiquitous PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab204440 Zm00039ab204440_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab204440 Zm00039ab204440_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab204440 Zm00039ab204440_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab204440 Zm00039ab204440_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab204510 Zm00039ab204510_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab204780 Zm00039ab204780_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab204780 Zm00039ab204780_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab204780 Zm00039ab204780_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab204780 Zm00039ab204780_P002 viridiplantae PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00039ab204940 Zm00039ab204940_P004 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00039ab204940 Zm00039ab204940_P004 NA PWY-5203 soybean saponin I biosynthesis RXN-7570 EC-5.4.99.39 Zm00039ab204940 Zm00039ab204940_P005 conditional PWY-6115 avenacin biosynthesis, initial reactions RXN-7570 EC-5.4.99.39 Zm00039ab204940 Zm00039ab204940_P005 NA PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab205010 Zm00039ab205010_P003 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab205010 Zm00039ab205010_P004 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab205170 Zm00039ab205170_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab205170 Zm00039ab205170_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab205170 Zm00039ab205170_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab205170 Zm00039ab205170_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab205250 Zm00039ab205250_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab205270 Zm00039ab205270_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab205310 Zm00039ab205310_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab205330 Zm00039ab205330_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab205650 Zm00039ab205650_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab205680 Zm00039ab205680_P003 conditional PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab205810 Zm00039ab205810_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab205810 Zm00039ab205810_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab205810 Zm00039ab205810_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab205810 Zm00039ab205810_P001 manual ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab205820 Zm00039ab205820_P001 ubiquitous PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab205840 Zm00039ab205840_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab205840 Zm00039ab205840_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206030 Zm00039ab206030_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206030 Zm00039ab206030_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206030 Zm00039ab206030_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206030 Zm00039ab206030_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P004 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P004 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P005 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206070 Zm00039ab206070_P005 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab206080 Zm00039ab206080_P001 conditional PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab206110 Zm00039ab206110_P002 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab206150 Zm00039ab206150_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab206160 Zm00039ab206160_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab206160 Zm00039ab206160_P002 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab206310 Zm00039ab206310_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab206380 Zm00039ab206380_P002 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P005 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P006 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P006 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab206500 Zm00039ab206500_P006 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab206590 Zm00039ab206590_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab206590 Zm00039ab206590_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab206600 Zm00039ab206600_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab206620 Zm00039ab206620_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab206620 Zm00039ab206620_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab206620 Zm00039ab206620_P003 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab206620 Zm00039ab206620_P004 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab206880 Zm00039ab206880_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab206930 Zm00039ab206930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab207150 Zm00039ab207150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab207150 Zm00039ab207150_P003 viridiplantae PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab207270 Zm00039ab207270_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab207270 Zm00039ab207270_P001 expected PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab207310 Zm00039ab207310_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab207310 Zm00039ab207310_P002 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab207380 Zm00039ab207380_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab207440 Zm00039ab207440_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab207890 Zm00039ab207890_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab207890 Zm00039ab207890_P002 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab208020 Zm00039ab208020_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab208020 Zm00039ab208020_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab208020 Zm00039ab208020_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab208030 Zm00039ab208030_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab208100 Zm00039ab208100_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab208100 Zm00039ab208100_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab208150 Zm00039ab208150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab208160 Zm00039ab208160_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab208270 Zm00039ab208270_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab208560 Zm00039ab208560_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P002 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P003 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P004 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P004 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P005 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P005 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P005 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P006 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P006 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P006 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab208830 Zm00039ab208830_P007 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P007 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab208830 Zm00039ab208830_P007 NA PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab208860 Zm00039ab208860_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab208860 Zm00039ab208860_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab208930 Zm00039ab208930_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab208930 Zm00039ab208930_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab208930 Zm00039ab208930_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab209220 Zm00039ab209220_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab209220 Zm00039ab209220_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab209220 Zm00039ab209220_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab209220 Zm00039ab209220_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab209560 Zm00039ab209560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab209560 Zm00039ab209560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab209560 Zm00039ab209560_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab209700 Zm00039ab209700_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab209840 Zm00039ab209840_P002 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab209890 Zm00039ab209890_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab209910 Zm00039ab209910_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab209910 Zm00039ab209910_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00039ab210640 Zm00039ab210640_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00039ab210640 Zm00039ab210640_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00039ab210640 Zm00039ab210640_P003 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab210770 Zm00039ab210770_P002 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab210830 Zm00039ab210830_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab210840 Zm00039ab210840_P002 NA PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab211120 Zm00039ab211120_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab211120 Zm00039ab211120_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab211120 Zm00039ab211120_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab211120 Zm00039ab211120_P004 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab211150 Zm00039ab211150_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab211150 Zm00039ab211150_P002 expected PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab211200 Zm00039ab211200_P001 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab211320 Zm00039ab211320_P001 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab211340 Zm00039ab211340_P001 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab211590 Zm00039ab211590_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab211590 Zm00039ab211590_P002 NA PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab211760 Zm00039ab211760_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab211770 Zm00039ab211770_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab211790 Zm00039ab211790_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab211820 Zm00039ab211820_P001 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab212060 Zm00039ab212060_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00039ab212100 Zm00039ab212100_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00039ab212100 Zm00039ab212100_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00039ab212100 Zm00039ab212100_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab212110 Zm00039ab212110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab212110 Zm00039ab212110_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab212130 Zm00039ab212130_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab212130 Zm00039ab212130_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab212130 Zm00039ab212130_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab212130 Zm00039ab212130_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab212130 Zm00039ab212130_P005 viridiplantae PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212180 Zm00039ab212180_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212180 Zm00039ab212180_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212180 Zm00039ab212180_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212180 Zm00039ab212180_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab212410 Zm00039ab212410_P003 conditional PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00039ab212540 Zm00039ab212540_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212610 Zm00039ab212610_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab212610 Zm00039ab212610_P002 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab212980 Zm00039ab212980_P001 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8342 EC-2.8.1.12 Zm00039ab212990 Zm00039ab212990_P001 viridiplantae PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab213000 Zm00039ab213000_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab213000 Zm00039ab213000_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab213000 Zm00039ab213000_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab213060 Zm00039ab213060_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab213060 Zm00039ab213060_P002 expected PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab213100 Zm00039ab213100_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab213100 Zm00039ab213100_P002 excluded PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab213110 Zm00039ab213110_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab213110 Zm00039ab213110_P002 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab213190 Zm00039ab213190_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab213190 Zm00039ab213190_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab213190 Zm00039ab213190_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab213190 Zm00039ab213190_P002 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab213230 Zm00039ab213230_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab213230 Zm00039ab213230_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab213240 Zm00039ab213240_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab213240 Zm00039ab213240_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab213290 Zm00039ab213290_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab213290 Zm00039ab213290_P001 conditional PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00039ab213390 Zm00039ab213390_P001 expected PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab213580 Zm00039ab213580_P002 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab213720 Zm00039ab213720_P003 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab213780 Zm00039ab213780_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab213780 Zm00039ab213780_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00039ab213810 Zm00039ab213810_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00039ab213810 Zm00039ab213810_P003 viridiplantae PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab214080 Zm00039ab214080_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab214080 Zm00039ab214080_P002 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab214270 Zm00039ab214270_P001 ubiquitous PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab214270 Zm00039ab214270_P002 ubiquitous PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab214580 Zm00039ab214580_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00039ab214620 Zm00039ab214620_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab214720 Zm00039ab214720_P001 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab214730 Zm00039ab214730_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab214730 Zm00039ab214730_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab214730 Zm00039ab214730_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab214730 Zm00039ab214730_P004 conditional PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P003 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab214790 Zm00039ab214790_P004 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab214790 Zm00039ab214790_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab215000 Zm00039ab215000_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab215370 Zm00039ab215370_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab215400 Zm00039ab215400_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab215400 Zm00039ab215400_P001 viridiplantae LARABITOLUTIL-PWY xylitol degradation D-XYLULOSE-REDUCTASE-RXN EC-1.1.1.9 Zm00039ab215420 Zm00039ab215420_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab215480 Zm00039ab215480_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab215480 Zm00039ab215480_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab215480 Zm00039ab215480_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab215480 Zm00039ab215480_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab215480 Zm00039ab215480_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab215480 Zm00039ab215480_P002 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab215490 Zm00039ab215490_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab215490 Zm00039ab215490_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab215490 Zm00039ab215490_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab215490 Zm00039ab215490_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab215490 Zm00039ab215490_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab215600 Zm00039ab215600_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab215600 Zm00039ab215600_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab215660 Zm00039ab215660_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-8042 EC-5.2.1.13 Zm00039ab215660 Zm00039ab215660_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab216090 Zm00039ab216090_P001 ubiquitous TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab216100 Zm00039ab216100_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab216100 Zm00039ab216100_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab216200 Zm00039ab216200_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab216200 Zm00039ab216200_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.117-RXN EC-2.4.1.117 Zm00039ab216310 Zm00039ab216310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab216320 Zm00039ab216320_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab216320 Zm00039ab216320_P002 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab216470 Zm00039ab216470_P002 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216570 Zm00039ab216570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216570 Zm00039ab216570_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216570 Zm00039ab216570_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216570 Zm00039ab216570_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216580 Zm00039ab216580_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab216590 Zm00039ab216590_P001 conditional PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab216620 Zm00039ab216620_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab216730 Zm00039ab216730_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab216870 Zm00039ab216870_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00039ab216900 Zm00039ab216900_P001 ubiquitous PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab216970 Zm00039ab216970_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab217010 Zm00039ab217010_P001 viridiplantae PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217160 Zm00039ab217160_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217160 Zm00039ab217160_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217160 Zm00039ab217160_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217160 Zm00039ab217160_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217180 Zm00039ab217180_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab217180 Zm00039ab217180_P002 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab217290 Zm00039ab217290_P001 viridiplantae PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab217330 Zm00039ab217330_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab217450 Zm00039ab217450_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab217450 Zm00039ab217450_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab217780 Zm00039ab217780_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab217780 Zm00039ab217780_P002 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab217820 Zm00039ab217820_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab217950 Zm00039ab217950_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab217950 Zm00039ab217950_P002 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab217950 Zm00039ab217950_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab217960 Zm00039ab217960_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab217960 Zm00039ab217960_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab217960 Zm00039ab217960_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P002 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P003 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P004 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab218330 Zm00039ab218330_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab218340 Zm00039ab218340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab218340 Zm00039ab218340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab218340 Zm00039ab218340_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab218340 Zm00039ab218340_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab218340 Zm00039ab218340_P005 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab218370 Zm00039ab218370_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I IMP-DEHYDROG-RXN EC-1.1.1.205 Zm00039ab218370 Zm00039ab218370_P001 ubiquitous PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab218420 Zm00039ab218420_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab218420 Zm00039ab218420_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab218610 Zm00039ab218610_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab218660 Zm00039ab218660_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab218660 Zm00039ab218660_P002 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab218770 Zm00039ab218770_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab218770 Zm00039ab218770_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab219030 Zm00039ab219030_P002 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab219080 Zm00039ab219080_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab219080 Zm00039ab219080_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00039ab219130 Zm00039ab219130_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.11 Zm00039ab219130 Zm00039ab219130_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab219160 Zm00039ab219160_P001 viridiplantae PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab219380 Zm00039ab219380_P001 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab219380 Zm00039ab219380_P002 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab219380 Zm00039ab219380_P003 expected PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UGD-RXN EC-1.1.1.22 Zm00039ab219380 Zm00039ab219380_P004 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab219600 Zm00039ab219600_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab219600 Zm00039ab219600_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab219600 Zm00039ab219600_P001 conditional PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P001 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P001 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P002 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P002 expected PWY-5340 sulfate activation for sulfonation SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P003 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFATE-ADENYLYLTRANS-RXN EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P003 viridiplantae PWY-6932 selenate reduction RXN-12720 EC-2.7.7.4 Zm00039ab219870 Zm00039ab219870_P003 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab220490 Zm00039ab220490_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab220490 Zm00039ab220490_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab220490 Zm00039ab220490_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab220490 Zm00039ab220490_P003 NA LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab220770 Zm00039ab220770_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab221100 Zm00039ab221100_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab221240 Zm00039ab221240_P004 expected PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab221470 Zm00039ab221470_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab221470 Zm00039ab221470_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab221470 Zm00039ab221470_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab221470 Zm00039ab221470_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P003 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab221480 Zm00039ab221480_P004 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab221480 Zm00039ab221480_P004 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab221510 Zm00039ab221510_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab221580 Zm00039ab221580_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab221580 Zm00039ab221580_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab221580 Zm00039ab221580_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab221580 Zm00039ab221580_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab221610 Zm00039ab221610_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab221610 Zm00039ab221610_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab221700 Zm00039ab221700_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab221700 Zm00039ab221700_P002 viridiplantae PWY-5406 divinyl ether biosynthesis I RXN-8495 EC-1.13.11.58 Zm00039ab221740 Zm00039ab221740_P001 conditional PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8495 EC-1.13.11.58 Zm00039ab221740 Zm00039ab221740_P001 conditional PWY-5408 9-lipoxygenase and 9-hydroperoxide lyase pathway RXN-8495 EC-1.13.11.58 Zm00039ab221740 Zm00039ab221740_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab221780 Zm00039ab221780_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab221780 Zm00039ab221780_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab221780 Zm00039ab221780_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab221990 Zm00039ab221990_P003 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab222010 Zm00039ab222010_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab222010 Zm00039ab222010_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab222010 Zm00039ab222010_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab222010 Zm00039ab222010_P004 expected PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab222110 Zm00039ab222110_P003 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab222230 Zm00039ab222230_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab222350 Zm00039ab222350_P001 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab222760 Zm00039ab222760_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab222880 Zm00039ab222880_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab222890 Zm00039ab222890_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P001 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P001 viridiplantae PWY-5041 S-adenosyl-L-methionine cycle II HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12730 EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P002 expected PWY-702 L-methionine biosynthesis II (plants) HOMOCYSMET-RXN EC-2.1.1.14 Zm00039ab223090 Zm00039ab223090_P002 viridiplantae PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00039ab223140 Zm00039ab223140_P001 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00039ab223140 Zm00039ab223140_P002 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00039ab223140 Zm00039ab223140_P003 expected PWY-5068 chlorophyll cycle RXN-7678 EC-1.1.1.294 Zm00039ab223140 Zm00039ab223140_P004 expected PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab223220 Zm00039ab223220_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab223220 Zm00039ab223220_P001 ubiquitous PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14026 EC-3.1.3.91 Zm00039ab223310 Zm00039ab223310_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab223310 Zm00039ab223310_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14026 EC-3.1.3.91 Zm00039ab223310 Zm00039ab223310_P002 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab223470 Zm00039ab223470_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab223500 Zm00039ab223500_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab223500 Zm00039ab223500_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab223500 Zm00039ab223500_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab223510 Zm00039ab223510_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab223510 Zm00039ab223510_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab223510 Zm00039ab223510_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab223570 Zm00039ab223570_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab223570 Zm00039ab223570_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab223570 Zm00039ab223570_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab223570 Zm00039ab223570_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab223740 Zm00039ab223740_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab223740 Zm00039ab223740_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab223740 Zm00039ab223740_P001 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab223810 Zm00039ab223810_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab223810 Zm00039ab223810_P002 conditional PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab224360 Zm00039ab224360_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab224360 Zm00039ab224360_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab224360 Zm00039ab224360_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab224410 Zm00039ab224410_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab224410 Zm00039ab224410_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab224410 Zm00039ab224410_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab224410 Zm00039ab224410_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab224410 Zm00039ab224410_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab224410 Zm00039ab224410_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab224570 Zm00039ab224570_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab224580 Zm00039ab224580_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab224580 Zm00039ab224580_P001 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab224880 Zm00039ab224880_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab224880 Zm00039ab224880_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab225110 Zm00039ab225110_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab225110 Zm00039ab225110_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) PYRIDOXINE-4-DEHYDROGENASE-RXN EC-1.1.1.65 Zm00039ab225110 Zm00039ab225110_P003 expected GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab225670 Zm00039ab225670_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab225670 Zm00039ab225670_P001 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab225690 Zm00039ab225690_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab225740 Zm00039ab225740_P005 expected PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab225840 Zm00039ab225840_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab225850 Zm00039ab225850_P003 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab225870 Zm00039ab225870_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-5285 EC-1.3.1.33 Zm00039ab225870 Zm00039ab225870_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab225900 Zm00039ab225900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab225900 Zm00039ab225900_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab225900 Zm00039ab225900_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab226110 Zm00039ab226110_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab226110 Zm00039ab226110_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab226110 Zm00039ab226110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab226110 Zm00039ab226110_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab226110 Zm00039ab226110_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P001 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P001 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P002 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P002 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P003 conditional PWY-6515 phloridzin biosynthesis RXN-11468 EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P003 conditional PWY-7897 flavonoid di-C-glucosylation NARINGENIN-CHALCONE-SYNTHASE-RXN EC-2.3.1.74 Zm00039ab226290 Zm00039ab226290_P003 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab226670 Zm00039ab226670_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab226700 Zm00039ab226700_P001 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P003 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P004 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P004 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P004 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P005 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P005 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P005 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab226710 Zm00039ab226710_P005 ubiquitous PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab227080 Zm00039ab227080_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab227080 Zm00039ab227080_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab227080 Zm00039ab227080_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab227080 Zm00039ab227080_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P003 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P003 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab227160 Zm00039ab227160_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab227330 Zm00039ab227330_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab227400 Zm00039ab227400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab227400 Zm00039ab227400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab227400 Zm00039ab227400_P001 conditional PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00039ab227410 Zm00039ab227410_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab227640 Zm00039ab227640_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab227800 Zm00039ab227800_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab227800 Zm00039ab227800_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab227800 Zm00039ab227800_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab228270 Zm00039ab228270_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab228360 Zm00039ab228360_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab228440 Zm00039ab228440_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab228470 Zm00039ab228470_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab228470 Zm00039ab228470_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab228470 Zm00039ab228470_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab228470 Zm00039ab228470_P001 ubiquitous ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P003 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P004 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P004 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P004 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P004 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P005 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P005 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P005 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P005 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P006 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P006 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P006 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P006 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P007 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P007 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P007 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P007 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P008 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P008 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P008 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P008 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P009 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P009 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P009 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228540 Zm00039ab228540_P009 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228550 Zm00039ab228550_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab228550 Zm00039ab228550_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228550 Zm00039ab228550_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab228550 Zm00039ab228550_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab228750 Zm00039ab228750_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab228750 Zm00039ab228750_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab228750 Zm00039ab228750_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab228750 Zm00039ab228750_P002 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab228780 Zm00039ab228780_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab228780 Zm00039ab228780_P001 expected PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab228840 Zm00039ab228840_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab229140 Zm00039ab229140_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab229190 Zm00039ab229190_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229330 Zm00039ab229330_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229330 Zm00039ab229330_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229330 Zm00039ab229330_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229330 Zm00039ab229330_P004 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229360 Zm00039ab229360_P001 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229360 Zm00039ab229360_P002 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229360 Zm00039ab229360_P003 expected PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab229360 Zm00039ab229360_P004 expected VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab229430 Zm00039ab229430_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab229430 Zm00039ab229430_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab229430 Zm00039ab229430_P003 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab229430 Zm00039ab229430_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN EC-1.1.1.31 Zm00039ab229430 Zm00039ab229430_P005 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab229460 Zm00039ab229460_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab229720 Zm00039ab229720_P004 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230000 Zm00039ab230000_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab230020 Zm00039ab230020_P001 viridiplantae PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab230070 Zm00039ab230070_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab230070 Zm00039ab230070_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab230110 Zm00039ab230110_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab230110 Zm00039ab230110_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab230110 Zm00039ab230110_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab230130 Zm00039ab230130_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab230130 Zm00039ab230130_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab230130 Zm00039ab230130_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab230220 Zm00039ab230220_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab230220 Zm00039ab230220_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab230260 Zm00039ab230260_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab230420 Zm00039ab230420_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab230420 Zm00039ab230420_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab230440 Zm00039ab230440_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab230440 Zm00039ab230440_P002 expected PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab230460 Zm00039ab230460_P001 conditional PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab230460 Zm00039ab230460_P002 conditional PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab230530 Zm00039ab230530_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab230680 Zm00039ab230680_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab230780 Zm00039ab230780_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab230790 Zm00039ab230790_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab230790 Zm00039ab230790_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab230790 Zm00039ab230790_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab230790 Zm00039ab230790_P004 ubiquitous PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab230900 Zm00039ab230900_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab230910 Zm00039ab230910_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230960 Zm00039ab230960_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230960 Zm00039ab230960_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230960 Zm00039ab230960_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230970 Zm00039ab230970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230970 Zm00039ab230970_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230970 Zm00039ab230970_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230980 Zm00039ab230980_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230980 Zm00039ab230980_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230980 Zm00039ab230980_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab230990 Zm00039ab230990_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230990 Zm00039ab230990_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab230990 Zm00039ab230990_P001 conditional PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab231190 Zm00039ab231190_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab231190 Zm00039ab231190_P001 viridiplantae PWY-6498 eumelanin biosynthesis DOPACHROME-DELTA-ISOMERASE-RXN EC-5.3.3.12 Zm00039ab231410 Zm00039ab231410_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab231470 Zm00039ab231470_P001 viridiplantae PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P003 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P004 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P005 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab231500 Zm00039ab231500_P006 NA PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00039ab231560 Zm00039ab231560_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab231560 Zm00039ab231560_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab231690 Zm00039ab231690_P001 conditional PWY-5086 chlorophyll a biosynthesis I RXN-5286 EC-1.3.1.75 Zm00039ab231990 Zm00039ab231990_P002 expected PWY-5064 chlorophyll a biosynthesis II RXN-5286 EC-1.3.1.75 Zm00039ab231990 Zm00039ab231990_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab232040 Zm00039ab232040_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00039ab232170 Zm00039ab232170_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab232190 Zm00039ab232190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab232190 Zm00039ab232190_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00039ab232200 Zm00039ab232200_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab232250 Zm00039ab232250_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab232250 Zm00039ab232250_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab232250 Zm00039ab232250_P001 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab232450 Zm00039ab232450_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab232450 Zm00039ab232450_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab232540 Zm00039ab232540_P001 NA CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab232860 Zm00039ab232860_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab232860 Zm00039ab232860_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab232930 Zm00039ab232930_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab232930 Zm00039ab232930_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab232980 Zm00039ab232980_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab232980 Zm00039ab232980_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab232980 Zm00039ab232980_P003 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab233110 Zm00039ab233110_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab233120 Zm00039ab233120_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab233140 Zm00039ab233140_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab233140 Zm00039ab233140_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab233200 Zm00039ab233200_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab233200 Zm00039ab233200_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab233200 Zm00039ab233200_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab233320 Zm00039ab233320_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab233320 Zm00039ab233320_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab233320 Zm00039ab233320_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab233320 Zm00039ab233320_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab233410 Zm00039ab233410_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab233410 Zm00039ab233410_P002 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab233480 Zm00039ab233480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab233480 Zm00039ab233480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab233480 Zm00039ab233480_P001 conditional PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00039ab233500 Zm00039ab233500_P001 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00039ab233500 Zm00039ab233500_P002 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00039ab233500 Zm00039ab233500_P003 NA PWY-6663 plant sterol biosynthesis II RXN66-28 EC-1.3.1.72 Zm00039ab233500 Zm00039ab233500_P004 NA PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233660 Zm00039ab233660_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233670 Zm00039ab233670_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233670 Zm00039ab233670_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233670 Zm00039ab233670_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab233670 Zm00039ab233670_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P003 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P004 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P004 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P005 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab233730 Zm00039ab233730_P005 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P001 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P002 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P002 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P003 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P003 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P003 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P004 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab233750 Zm00039ab233750_P004 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab233750 Zm00039ab233750_P004 expected PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab233860 Zm00039ab233860_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab233860 Zm00039ab233860_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab233860 Zm00039ab233860_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab233860 Zm00039ab233860_P004 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab233930 Zm00039ab233930_P002 NA PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00039ab234020 Zm00039ab234020_P001 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00039ab234020 Zm00039ab234020_P002 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00039ab234020 Zm00039ab234020_P003 expected PWY-5481 pyruvate fermentation to (S)-lactate L-LACTATE-DEHYDROGENASE-RXN EC-1.1.1.27 Zm00039ab234030 Zm00039ab234030_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab234050 Zm00039ab234050_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab234050 Zm00039ab234050_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab234050 Zm00039ab234050_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab234130 Zm00039ab234130_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab234130 Zm00039ab234130_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab234130 Zm00039ab234130_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab234130 Zm00039ab234130_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab234320 Zm00039ab234320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5468 EC-2.4.1.260 Zm00039ab234320 Zm00039ab234320_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab234370 Zm00039ab234370_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab234370 Zm00039ab234370_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab234460 Zm00039ab234460_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab234460 Zm00039ab234460_P002 viridiplantae PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab234690 Zm00039ab234690_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab234690 Zm00039ab234690_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab234690 Zm00039ab234690_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab234690 Zm00039ab234690_P001 expected BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab234780 Zm00039ab234780_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab234780 Zm00039ab234780_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab234780 Zm00039ab234780_P001 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab234780 Zm00039ab234780_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab234780 Zm00039ab234780_P002 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab234780 Zm00039ab234780_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00039ab234830 Zm00039ab234830_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P001 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00039ab234830 Zm00039ab234830_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab234830 Zm00039ab234830_P002 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab234870 Zm00039ab234870_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab234870 Zm00039ab234870_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab234870 Zm00039ab234870_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab234890 Zm00039ab234890_P006 viridiplantae PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab234940 Zm00039ab234940_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab234940 Zm00039ab234940_P001 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab234940 Zm00039ab234940_P002 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab234940 Zm00039ab234940_P002 conditional PWY-7141 (3S)-linalool biosynthesis 4.2.3.25-RXN EC-4.2.3.25 Zm00039ab234960 Zm00039ab234960_P001 conditional PWY-5434 (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I RXN-8616 EC-4.2.3.48 Zm00039ab234960 Zm00039ab234960_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab234980 Zm00039ab234980_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab235090 Zm00039ab235090_P001 NA PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab235370 Zm00039ab235370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab235430 Zm00039ab235430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab235430 Zm00039ab235430_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab235460 Zm00039ab235460_P003 NA PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab235500 Zm00039ab235500_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab235500 Zm00039ab235500_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab235560 Zm00039ab235560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab235560 Zm00039ab235560_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab235630 Zm00039ab235630_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab235630 Zm00039ab235630_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab235630 Zm00039ab235630_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab235630 Zm00039ab235630_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab235630 Zm00039ab235630_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00039ab236020 Zm00039ab236020_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00039ab236020 Zm00039ab236020_P001 NA PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00039ab236030 Zm00039ab236030_P001 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00039ab236030 Zm00039ab236030_P002 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00039ab236030 Zm00039ab236030_P003 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) L-ASPARTATE-OXID-RXN EC-1.4.3.16 Zm00039ab236030 Zm00039ab236030_P004 viridiplantae PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00039ab236320 Zm00039ab236320_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00039ab236330 Zm00039ab236330_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00039ab236360 Zm00039ab236360_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00039ab236390 Zm00039ab236390_P001 expected PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6722 EC-2.1.1.273 Zm00039ab236400 Zm00039ab236400_P001 expected PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab236470 Zm00039ab236470_P002 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab236610 Zm00039ab236610_P004 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab236910 Zm00039ab236910_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab237010 Zm00039ab237010_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis DARAB5PISOM-RXN EC-5.3.1.13 Zm00039ab237030 Zm00039ab237030_P001 expected PWY-3881 mannitol biosynthesis MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN EC-1.1.1.224 Zm00039ab237180 Zm00039ab237180_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab237260 Zm00039ab237260_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTINLIG-RXN EC-6.3.4.15 Zm00039ab237390 Zm00039ab237390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab237410 Zm00039ab237410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab237410 Zm00039ab237410_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab237410 Zm00039ab237410_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab237520 Zm00039ab237520_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab237520 Zm00039ab237520_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab237520 Zm00039ab237520_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab237520 Zm00039ab237520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab237520 Zm00039ab237520_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab237540 Zm00039ab237540_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab237540 Zm00039ab237540_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab237540 Zm00039ab237540_P001 conditional PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab237610 Zm00039ab237610_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab237610 Zm00039ab237610_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab237610 Zm00039ab237610_P003 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab237610 Zm00039ab237610_P004 viridiplantae PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab237610 Zm00039ab237610_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab237620 Zm00039ab237620_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab237620 Zm00039ab237620_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab237620 Zm00039ab237620_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) OHMETHYLBILANESYN-RXN EC-2.5.1.61 Zm00039ab237620 Zm00039ab237620_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab237680 Zm00039ab237680_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab237750 Zm00039ab237750_P004 conditional PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab237870 Zm00039ab237870_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab237870 Zm00039ab237870_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab237870 Zm00039ab237870_P001 ubiquitous PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P001 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P001 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P002 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P002 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P002 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P003 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P003 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P003 expected PWY-6473 4-aminobutanoate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P004 viridiplantae PWY-6535 4-aminobutanoate degradation I SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P004 expected PWY-4321 L-glutamate degradation IV SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN EC-1.2.1.24 Zm00039ab237900 Zm00039ab237900_P004 expected PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab237980 Zm00039ab237980_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab237980 Zm00039ab237980_P002 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab237980 Zm00039ab237980_P003 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab238320 Zm00039ab238320_P002 NA PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab238690 Zm00039ab238690_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab238690 Zm00039ab238690_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab238690 Zm00039ab238690_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab238710 Zm00039ab238710_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab238710 Zm00039ab238710_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab238710 Zm00039ab238710_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab238710 Zm00039ab238710_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab239130 Zm00039ab239130_P004 conditional PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab239400 Zm00039ab239400_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab239400 Zm00039ab239400_P003 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab239410 Zm00039ab239410_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab239410 Zm00039ab239410_P002 expected PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab239470 Zm00039ab239470_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab239470 Zm00039ab239470_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab239470 Zm00039ab239470_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab239470 Zm00039ab239470_P004 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab239470 Zm00039ab239470_P005 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab239510 Zm00039ab239510_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab239510 Zm00039ab239510_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab239510 Zm00039ab239510_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab239570 Zm00039ab239570_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab239570 Zm00039ab239570_P002 conditional PWY-5947 lutein biosynthesis RXN1F-148 EC-5.5.1.19 Zm00039ab239780 Zm00039ab239780_P001 viridiplantae PWY-5943 β-carotene biosynthesis RXN1F-151 EC-5.5.1.19 Zm00039ab239780 Zm00039ab239780_P001 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab240080 Zm00039ab240080_P001 ubiquitous TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab240650 Zm00039ab240650_P001 expected GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab240750 Zm00039ab240750_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab240750 Zm00039ab240750_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00039ab240750 Zm00039ab240750_P001 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab241090 Zm00039ab241090_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab241090 Zm00039ab241090_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab241090 Zm00039ab241090_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab241090 Zm00039ab241090_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab241090 Zm00039ab241090_P005 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab241110 Zm00039ab241110_P002 ubiquitous TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00039ab241140 Zm00039ab241140_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I FUMARYLACETOACETASE-RXN EC-3.7.1.2 Zm00039ab241140 Zm00039ab241140_P002 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P001 conditional PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P002 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab241390 Zm00039ab241390_P002 conditional PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab241410 Zm00039ab241410_P002 NA PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab241760 Zm00039ab241760_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab241760 Zm00039ab241760_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab241760 Zm00039ab241760_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242010 Zm00039ab242010_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab242020 Zm00039ab242020_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab242040 Zm00039ab242040_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab242210 Zm00039ab242210_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab242210 Zm00039ab242210_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab242210 Zm00039ab242210_P003 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P005 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14921 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P006 conditional PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2543 EC-5.5.1.24 Zm00039ab242250 Zm00039ab242250_P006 viridiplantae PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P002 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab242280 Zm00039ab242280_P003 expected PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab242330 Zm00039ab242330_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab242330 Zm00039ab242330_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab242350 Zm00039ab242350_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab242440 Zm00039ab242440_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab242440 Zm00039ab242440_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab242440 Zm00039ab242440_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab242440 Zm00039ab242440_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab242440 Zm00039ab242440_P001 viridiplantae PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P001 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P002 NA PWY-6543 4-aminobenzoate biosynthesis ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II ADCLY-RXN EC-4.1.3.38 Zm00039ab242470 Zm00039ab242470_P003 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab242660 Zm00039ab242660_P002 conditional PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab242720 Zm00039ab242720_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab242720 Zm00039ab242720_P002 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab242720 Zm00039ab242720_P003 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab242720 Zm00039ab242720_P004 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab242790 Zm00039ab242790_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab242790 Zm00039ab242790_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab243150 Zm00039ab243150_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab243150 Zm00039ab243150_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab243340 Zm00039ab243340_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab243340 Zm00039ab243340_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab243340 Zm00039ab243340_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab243500 Zm00039ab243500_P003 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab243580 Zm00039ab243580_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab243580 Zm00039ab243580_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab243660 Zm00039ab243660_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab243660 Zm00039ab243660_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab243660 Zm00039ab243660_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab243660 Zm00039ab243660_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243720 Zm00039ab243720_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243720 Zm00039ab243720_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243720 Zm00039ab243720_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243740 Zm00039ab243740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243740 Zm00039ab243740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243740 Zm00039ab243740_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P004 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P004 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243760 Zm00039ab243760_P004 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab243770 Zm00039ab243770_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab243850 Zm00039ab243850_P002 NA PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab244170 Zm00039ab244170_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab244170 Zm00039ab244170_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab244170 Zm00039ab244170_P003 expected PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab244190 Zm00039ab244190_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis NAPHTHOATE-SYN-RXN EC-4.1.3.36 Zm00039ab244190 Zm00039ab244190_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P001 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P001 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P001 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P002 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P002 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P002 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P003 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P003 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P003 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P004 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P004 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P004 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P004 NA PWY-5690 TCA cycle II (plants and fungi) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P005 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P005 conditional PWY-6549 L-glutamine biosynthesis III CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P005 conditional PWYQT-4481 TCA cycle variation V (plant) CITSYN-RXN EC-2.3.3.16 Zm00039ab244290 Zm00039ab244290_P005 NA PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab244370 Zm00039ab244370_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab244370 Zm00039ab244370_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab244400 Zm00039ab244400_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab244400 Zm00039ab244400_P001 ubiquitous PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab244680 Zm00039ab244680_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab244680 Zm00039ab244680_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab244680 Zm00039ab244680_P003 expected PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00039ab244770 Zm00039ab244770_P001 conditional PWY-3385 choline biosynthesis I RXN-5647 EC-3.1.3.75 Zm00039ab244770 Zm00039ab244770_P002 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab244790 Zm00039ab244790_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab245210 Zm00039ab245210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab245210 Zm00039ab245210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab245210 Zm00039ab245210_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab245250 Zm00039ab245250_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab245250 Zm00039ab245250_P002 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245700 Zm00039ab245700_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245700 Zm00039ab245700_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245710 Zm00039ab245710_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245710 Zm00039ab245710_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245740 Zm00039ab245740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245740 Zm00039ab245740_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245750 Zm00039ab245750_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245750 Zm00039ab245750_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245780 Zm00039ab245780_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245780 Zm00039ab245780_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245790 Zm00039ab245790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245790 Zm00039ab245790_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245820 Zm00039ab245820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245820 Zm00039ab245820_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245830 Zm00039ab245830_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245830 Zm00039ab245830_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245870 Zm00039ab245870_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245870 Zm00039ab245870_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab245880 Zm00039ab245880_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab245880 Zm00039ab245880_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab245940 Zm00039ab245940_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab245970 Zm00039ab245970_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.6.1.80-RXN EC-2.6.1.80 Zm00039ab245970 Zm00039ab245970_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab246000 Zm00039ab246000_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab246020 Zm00039ab246020_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab246030 Zm00039ab246030_P001 NA PWY-6556 pyrimidine ribonucleosides salvage II URIDINE-NUCLEOSIDASE-RXN EC-3.2.2.3 Zm00039ab246030 Zm00039ab246030_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) RXN-8441 EC-3.2.2.3 Zm00039ab246030 Zm00039ab246030_P001 expected PWY-6663 plant sterol biosynthesis II RXN66-27 EC-1.3.1.21 Zm00039ab246170 Zm00039ab246170_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-707 EC-1.3.1.21 Zm00039ab246170 Zm00039ab246170_P001 ubiquitous PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab246190 Zm00039ab246190_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab246190 Zm00039ab246190_P002 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab246190 Zm00039ab246190_P003 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab246190 Zm00039ab246190_P004 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab246190 Zm00039ab246190_P005 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab246230 Zm00039ab246230_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab246230 Zm00039ab246230_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab246230 Zm00039ab246230_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab246260 Zm00039ab246260_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab246260 Zm00039ab246260_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00039ab246290 Zm00039ab246290_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00039ab246290 Zm00039ab246290_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00039ab246290 Zm00039ab246290_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00039ab246290 Zm00039ab246290_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNREDUC-RXN EC-1.1.1.193 Zm00039ab246290 Zm00039ab246290_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab246320 Zm00039ab246320_P001 expected PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab246430 Zm00039ab246430_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab246430 Zm00039ab246430_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab246430 Zm00039ab246430_P003 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab246430 Zm00039ab246430_P003 excluded PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab246760 Zm00039ab246760_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab246760 Zm00039ab246760_P002 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab246850 Zm00039ab246850_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab246850 Zm00039ab246850_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab246960 Zm00039ab246960_P001 conditional VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab247110 Zm00039ab247110_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab247110 Zm00039ab247110_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab247110 Zm00039ab247110_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab247110 Zm00039ab247110_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab247220 Zm00039ab247220_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab247220 Zm00039ab247220_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab247220 Zm00039ab247220_P003 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab247290 Zm00039ab247290_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab247310 Zm00039ab247310_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab247310 Zm00039ab247310_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINSYNDEAM-RXN EC-3.5.4.26 Zm00039ab247310 Zm00039ab247310_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab247500 Zm00039ab247500_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab247620 Zm00039ab247620_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab247620 Zm00039ab247620_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab247620 Zm00039ab247620_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab247620 Zm00039ab247620_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab247620 Zm00039ab247620_P001 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab247700 Zm00039ab247700_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab247700 Zm00039ab247700_P001 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab247930 Zm00039ab247930_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab247950 Zm00039ab247950_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab247960 Zm00039ab247960_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00039ab248070 Zm00039ab248070_P001 viridiplantae PWY-43 putrescine biosynthesis II N-CARBAMOYLPUTRESCINE-AMIDASE-RXN EC-3.5.1.53 Zm00039ab248070 Zm00039ab248070_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab248130 Zm00039ab248130_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab248130 Zm00039ab248130_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab248360 Zm00039ab248360_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab248640 Zm00039ab248640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab248850 Zm00039ab248850_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab248890 Zm00039ab248890_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab248890 Zm00039ab248890_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab248890 Zm00039ab248890_P003 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab248890 Zm00039ab248890_P004 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab248890 Zm00039ab248890_P005 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab248920 Zm00039ab248920_P001 NA PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab248990 Zm00039ab248990_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab249070 Zm00039ab249070_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab249230 Zm00039ab249230_P001 conditional PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde KYNURENINE-3-MONOOXYGENASE-RXN EC-1.14.13.9 Zm00039ab249340 Zm00039ab249340_P002 NA PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab249350 Zm00039ab249350_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab249380 Zm00039ab249380_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab249390 Zm00039ab249390_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab249390 Zm00039ab249390_P002 conditional HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab249490 Zm00039ab249490_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab249490 Zm00039ab249490_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOHEMEFERROCHELAT-RXN EC-4.99.1.1 Zm00039ab249490 Zm00039ab249490_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00039ab249550 Zm00039ab249550_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab249550 Zm00039ab249550_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I MALEYLACETOACETATE-ISOMERASE-RXN EC-5.2.1.2 Zm00039ab249550 Zm00039ab249550_P003 conditional PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab249600 Zm00039ab249600_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab249600 Zm00039ab249600_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab249600 Zm00039ab249600_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-8340 EC-4.1.99.22 Zm00039ab249600 Zm00039ab249600_P004 viridiplantae GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab249790 Zm00039ab249790_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab249890 Zm00039ab249890_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab249890 Zm00039ab249890_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab249890 Zm00039ab249890_P001 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab249960 Zm00039ab249960_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab249960 Zm00039ab249960_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab249960 Zm00039ab249960_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab249960 Zm00039ab249960_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab249960 Zm00039ab249960_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab249960 Zm00039ab249960_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab249960 Zm00039ab249960_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab249960 Zm00039ab249960_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab249960 Zm00039ab249960_P005 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) DIOHBUTANONEPSYN-RXN EC-4.1.99.12 Zm00039ab249960 Zm00039ab249960_P005 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab249970 Zm00039ab249970_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00039ab249970 Zm00039ab249970_P001 conditional PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab250050 Zm00039ab250050_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab250050 Zm00039ab250050_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab250050 Zm00039ab250050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab250050 Zm00039ab250050_P001 viridiplantae PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab250220 Zm00039ab250220_P001 expected PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab250430 Zm00039ab250430_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab250430 Zm00039ab250430_P001 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab250680 Zm00039ab250680_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) 2.5.1.64-RXN EC-2.2.1.9 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis 2.5.1.64-RXN EC-2.2.1.9 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-SYN-RXN EC-4.2.1.113 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9310 EC-4.2.99.20 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9310 EC-4.2.99.20 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab250690 Zm00039ab250690_P001 NA PWY-381 nitrate reduction II (assimilatory) NITRATE-REDUCTASE-NADH-RXN EC-1.7.1.1 Zm00039ab250900 Zm00039ab250900_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab251010 Zm00039ab251010_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab251190 Zm00039ab251190_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P003 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P004 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P004 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab251360 Zm00039ab251360_P004 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab251530 Zm00039ab251530_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab251530 Zm00039ab251530_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab251530 Zm00039ab251530_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab251630 Zm00039ab251630_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab251630 Zm00039ab251630_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab251650 Zm00039ab251650_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab251810 Zm00039ab251810_P001 conditional PWY-7560 methylerythritol phosphate pathway II RXN0-882 EC-1.17.7.1 Zm00039ab251840 Zm00039ab251840_P001 expected PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab251850 Zm00039ab251850_P001 conditional PWY-6673 caffeoylglucarate biosynthesis 2.3.1.98-RXN EC-2.3.1.98 Zm00039ab251850 Zm00039ab251850_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab251890 Zm00039ab251890_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab251890 Zm00039ab251890_P001 expected PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab251890 Zm00039ab251890_P002 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab251890 Zm00039ab251890_P002 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab251940 Zm00039ab251940_P001 expected PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab251960 Zm00039ab251960_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab251960 Zm00039ab251960_P002 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab251960 Zm00039ab251960_P003 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab252060 Zm00039ab252060_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab252060 Zm00039ab252060_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTSYN-RXN EC-2.2.1.6 Zm00039ab252060 Zm00039ab252060_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTSYN-RXN EC-2.2.1.6 Zm00039ab252060 Zm00039ab252060_P002 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P003 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P004 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P004 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab252240 Zm00039ab252240_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab252340 Zm00039ab252340_P004 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab252370 Zm00039ab252370_P001 expected PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab252390 Zm00039ab252390_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab252630 Zm00039ab252630_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab252790 Zm00039ab252790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab252790 Zm00039ab252790_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab252790 Zm00039ab252790_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab252790 Zm00039ab252790_P004 viridiplantae PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab252920 Zm00039ab252920_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab252920 Zm00039ab252920_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab252920 Zm00039ab252920_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab252920 Zm00039ab252920_P002 NA PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab253000 Zm00039ab253000_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab253000 Zm00039ab253000_P001 conditional PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab253020 Zm00039ab253020_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab253250 Zm00039ab253250_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab253250 Zm00039ab253250_P002 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab253510 Zm00039ab253510_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P001 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00039ab253690 Zm00039ab253690_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P002 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00039ab253690 Zm00039ab253690_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P003 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P003 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00039ab253690 Zm00039ab253690_P003 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P004 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab253690 Zm00039ab253690_P004 conditional ASPSYNII-PWY cyanide detoxification I 3.5.5.4-RXN EC-3.5.5.4 Zm00039ab253690 Zm00039ab253690_P004 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab253820 Zm00039ab253820_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab253830 Zm00039ab253830_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab254690 Zm00039ab254690_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab254690 Zm00039ab254690_P001 conditional LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254700 Zm00039ab254700_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254700 Zm00039ab254700_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254710 Zm00039ab254710_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254710 Zm00039ab254710_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254710 Zm00039ab254710_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I METHYLGLUTACONYL-COA-HYDRATASE-RXN EC-4.2.1.18 Zm00039ab254710 Zm00039ab254710_P004 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab254740 Zm00039ab254740_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab254740 Zm00039ab254740_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab254740 Zm00039ab254740_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab254740 Zm00039ab254740_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab254740 Zm00039ab254740_P001 NA TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab255100 Zm00039ab255100_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab255100 Zm00039ab255100_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab255100 Zm00039ab255100_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab255100 Zm00039ab255100_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab255270 Zm00039ab255270_P001 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab255460 Zm00039ab255460_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab255750 Zm00039ab255750_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab255780 Zm00039ab255780_P002 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYRHAMREDUCT-RXN EC-1.1.1.133 Zm00039ab255920 Zm00039ab255920_P001 conditional DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPDEHYDRHAMEPIM-RXN EC-5.1.3.13 Zm00039ab255920 Zm00039ab255920_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab255980 Zm00039ab255980_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab256230 Zm00039ab256230_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab256320 Zm00039ab256320_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5471 EC-2.4.1.265 Zm00039ab256390 Zm00039ab256390_P001 viridiplantae PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00039ab256420 Zm00039ab256420_P001 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00039ab256420 Zm00039ab256420_P002 expected PWY-6019 pseudouridine degradation RXN0-5398 EC-4.2.1.70 Zm00039ab256420 Zm00039ab256420_P003 expected GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00039ab256530 Zm00039ab256530_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00039ab256530 Zm00039ab256530_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNDEACET-RXN EC-3.5.1.16 Zm00039ab256530 Zm00039ab256530_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab256680 Zm00039ab256680_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab256680 Zm00039ab256680_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab256680 Zm00039ab256680_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab256750 Zm00039ab256750_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab256770 Zm00039ab256770_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab256770 Zm00039ab256770_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P001 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P002 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P003 viridiplantae PWY-5723 Rubisco shunt PHOSPHORIBULOKINASE-RXN EC-2.7.1.19 Zm00039ab256810 Zm00039ab256810_P003 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab256850 Zm00039ab256850_P001 expected PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab256970 Zm00039ab256970_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) RXN-6883 EC-1.10.3.11 Zm00039ab256970 Zm00039ab256970_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab257180 Zm00039ab257180_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab257180 Zm00039ab257180_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab257180 Zm00039ab257180_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab257180 Zm00039ab257180_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) 3-DEHYDROSPHINGANINE-REDUCTASE-RXN EC-1.1.1.102 Zm00039ab257190 Zm00039ab257190_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab257300 Zm00039ab257300_P001 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab257310 Zm00039ab257310_P001 viridiplantae CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P001 expected CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab257330 Zm00039ab257330_P002 expected PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P001 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P002 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P002 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P002 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P003 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P003 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P003 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P004 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P004 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P004 NA PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P005 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P005 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab257540 Zm00039ab257540_P005 NA PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P001 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P002 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P002 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P003 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P003 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P004 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P004 expected PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P005 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab257550 Zm00039ab257550_P005 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab257570 Zm00039ab257570_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab257590 Zm00039ab257590_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab257590 Zm00039ab257590_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab257590 Zm00039ab257590_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab257590 Zm00039ab257590_P004 NA HISTSYN-PWY L-histidine biosynthesis HISTAMINOTRANS-RXN EC-2.6.1.9 Zm00039ab257630 Zm00039ab257630_P001 viridiplantae PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab257880 Zm00039ab257880_P001 ubiquitous PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab257900 Zm00039ab257900_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab257900 Zm00039ab257900_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab257900 Zm00039ab257900_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab257900 Zm00039ab257900_P004 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab257950 Zm00039ab257950_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab257950 Zm00039ab257950_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab258460 Zm00039ab258460_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab258470 Zm00039ab258470_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab258470 Zm00039ab258470_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab258470 Zm00039ab258470_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258570 Zm00039ab258570_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258570 Zm00039ab258570_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258570 Zm00039ab258570_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258570 Zm00039ab258570_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258580 Zm00039ab258580_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab258580 Zm00039ab258580_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab258800 Zm00039ab258800_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab258800 Zm00039ab258800_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab258870 Zm00039ab258870_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab258870 Zm00039ab258870_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab258870 Zm00039ab258870_P001 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab258960 Zm00039ab258960_P001 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab258970 Zm00039ab258970_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab258970 Zm00039ab258970_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab258970 Zm00039ab258970_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab258980 Zm00039ab258980_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab258980 Zm00039ab258980_P002 ubiquitous PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab259030 Zm00039ab259030_P003 NA PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab259050 Zm00039ab259050_P001 expected PWY-3982 uracil degradation I (reductive) DIHYDROPYRIMIDINASE-RXN EC-3.5.2.2 Zm00039ab259100 Zm00039ab259100_P001 viridiplantae PWY-6430 thymine degradation RXN-11211 EC-3.5.2.2 Zm00039ab259100 Zm00039ab259100_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab259320 Zm00039ab259320_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab259330 Zm00039ab259330_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab259330 Zm00039ab259330_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab259430 Zm00039ab259430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab259430 Zm00039ab259430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab259430 Zm00039ab259430_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab259570 Zm00039ab259570_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab259570 Zm00039ab259570_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab259610 Zm00039ab259610_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab259610 Zm00039ab259610_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab259720 Zm00039ab259720_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab259830 Zm00039ab259830_P001 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab259840 Zm00039ab259840_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab259840 Zm00039ab259840_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab259840 Zm00039ab259840_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab259840 Zm00039ab259840_P004 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259870 Zm00039ab259870_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259870 Zm00039ab259870_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259870 Zm00039ab259870_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259870 Zm00039ab259870_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259880 Zm00039ab259880_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab259880 Zm00039ab259880_P001 expected PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-KINASE-RXN EC-2.7.1.71 Zm00039ab260310 Zm00039ab260310_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab260330 Zm00039ab260330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab260330 Zm00039ab260330_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab260510 Zm00039ab260510_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab260510 Zm00039ab260510_P002 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab260540 Zm00039ab260540_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab260540 Zm00039ab260540_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P001 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P002 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P002 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P003 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P003 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P003 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P003 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P004 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P004 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P004 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P004 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P005 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINAMID-RXN EC-3.5.1.19 Zm00039ab260670 Zm00039ab260670_P005 expected PWY-581 indole-3-acetate biosynthesis II RXNN-404 EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P005 conditional ARGDEG-V-PWY L-arginine degradation X (arginine monooxygenase pathway) GUANIDINOBUTANAMIDE-NH3-RXN EC-3.5.1.4 Zm00039ab260670 Zm00039ab260670_P005 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab260710 Zm00039ab260710_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab260710 Zm00039ab260710_P002 expected PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab261250 Zm00039ab261250_P001 viridiplantae PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab261250 Zm00039ab261250_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab261280 Zm00039ab261280_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab261300 Zm00039ab261300_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab261310 Zm00039ab261310_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab261320 Zm00039ab261320_P001 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P002 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab261410 Zm00039ab261410_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab261550 Zm00039ab261550_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab261800 Zm00039ab261800_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab261850 Zm00039ab261850_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab261850 Zm00039ab261850_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab261850 Zm00039ab261850_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab262280 Zm00039ab262280_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab262280 Zm00039ab262280_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab262280 Zm00039ab262280_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab262290 Zm00039ab262290_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab262290 Zm00039ab262290_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab262290 Zm00039ab262290_P001 conditional PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P002 expected PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab262320 Zm00039ab262320_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab262320 Zm00039ab262320_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation RXN-7913 EC-2.7.4.25 Zm00039ab262320 Zm00039ab262320_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab262320 Zm00039ab262320_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P002 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P003 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P003 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P003 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P004 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P004 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P004 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P005 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P005 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab262360 Zm00039ab262360_P005 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P001 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P001 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P002 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P002 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P003 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P003 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P004 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P004 NA LYSINE-DEG2-PWY lysine degradation II 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P005 NA PWYQT-1 lysine degradation III 1.5.1.9-RXN EC-1.5.1.9 Zm00039ab262620 Zm00039ab262620_P005 NA PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab262890 Zm00039ab262890_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab262890 Zm00039ab262890_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab262890 Zm00039ab262890_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab262890 Zm00039ab262890_P004 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab263010 Zm00039ab263010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab263010 Zm00039ab263010_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab263010 Zm00039ab263010_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab263010 Zm00039ab263010_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab263010 Zm00039ab263010_P003 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab263090 Zm00039ab263090_P001 viridiplantae PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab263220 Zm00039ab263220_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab263220 Zm00039ab263220_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab263220 Zm00039ab263220_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab263220 Zm00039ab263220_P001 NA PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab263350 Zm00039ab263350_P001 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab263350 Zm00039ab263350_P002 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab263350 Zm00039ab263350_P003 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab263350 Zm00039ab263350_P004 ubiquitous PWY-922 mevalonate pathway I DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN EC-4.1.1.33 Zm00039ab263350 Zm00039ab263350_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P003 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P003 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P003 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P003 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab263430 Zm00039ab263430_P003 NA PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00039ab263660 Zm00039ab263660_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00039ab263660 Zm00039ab263660_P002 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00039ab263660 Zm00039ab263660_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab263910 Zm00039ab263910_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab263910 Zm00039ab263910_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab263910 Zm00039ab263910_P001 manual PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P002 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P002 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P003 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P003 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P004 expected PWY-6482 diphthamide biosynthesis I (archaea) DIPHTINE--AMMONIA-LIGASE-RXN EC-6.3.1.14 Zm00039ab263980 Zm00039ab263980_P004 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab264130 Zm00039ab264130_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab264130 Zm00039ab264130_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab264140 Zm00039ab264140_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab264140 Zm00039ab264140_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab264140 Zm00039ab264140_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P002 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P003 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab264180 Zm00039ab264180_P003 conditional PWY-5486 pyruvate fermentation to ethanol II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 viridiplantae PWY66-21 ethanol degradation II ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 expected PWY-6333 acetaldehyde biosynthesis I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 ubiquitous PWY-6802 salidroside biosynthesis RXN3O-4113 EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 conditional PWY-5079 L-phenylalanine degradation III RXN-7700 EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 NA ETOH-ACETYLCOA-ANA-PWY ethanol degradation I ALCOHOL-DEHYDROG-RXN EC-1.1.1.1 Zm00039ab264280 Zm00039ab264280_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) RXN-2962 EC-1.1.1.284 Zm00039ab264280 Zm00039ab264280_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab264290 Zm00039ab264290_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab264290 Zm00039ab264290_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P002 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P002 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab264450 Zm00039ab264450_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab264480 Zm00039ab264480_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab264550 Zm00039ab264550_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab264680 Zm00039ab264680_P001 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab264680 Zm00039ab264680_P002 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab264680 Zm00039ab264680_P003 viridiplantae PWY-5905 hypusine biosynthesis DEOXYHYPUSINE-MONOOXYGENASE-RXN EC-1.14.99.29 Zm00039ab264680 Zm00039ab264680_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab265010 Zm00039ab265010_P001 viridiplantae HOMOSER-THRESYN-PWY L-threonine biosynthesis HOMOSERKIN-RXN EC-2.7.1.39 Zm00039ab265130 Zm00039ab265130_P001 viridiplantae PWY-702 L-methionine biosynthesis II (plants) HOMOSERKIN-RXN EC-2.7.1.39 Zm00039ab265130 Zm00039ab265130_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab265160 Zm00039ab265160_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab265170 Zm00039ab265170_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab265180 Zm00039ab265180_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab265200 Zm00039ab265200_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab265330 Zm00039ab265330_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab265330 Zm00039ab265330_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab265330 Zm00039ab265330_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab265330 Zm00039ab265330_P001 NA GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00039ab265420 Zm00039ab265420_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00039ab265430 Zm00039ab265430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab265650 Zm00039ab265650_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab265650 Zm00039ab265650_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab265770 Zm00039ab265770_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab265770 Zm00039ab265770_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab265770 Zm00039ab265770_P003 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab266030 Zm00039ab266030_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab266030 Zm00039ab266030_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab266030 Zm00039ab266030_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab266030 Zm00039ab266030_P004 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab266100 Zm00039ab266100_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab266100 Zm00039ab266100_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab266100 Zm00039ab266100_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab266100 Zm00039ab266100_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab266180 Zm00039ab266180_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab266240 Zm00039ab266240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab266240 Zm00039ab266240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab266240 Zm00039ab266240_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab266330 Zm00039ab266330_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab266330 Zm00039ab266330_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab266330 Zm00039ab266330_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab266380 Zm00039ab266380_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab266420 Zm00039ab266420_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab266740 Zm00039ab266740_P001 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab266830 Zm00039ab266830_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab266920 Zm00039ab266920_P002 NA GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P001 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P002 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P003 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P004 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P005 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P006 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P007 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P008 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P009 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P010 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P011 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P012 conditional GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab267080 Zm00039ab267080_P013 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab267350 Zm00039ab267350_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab267350 Zm00039ab267350_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P003 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P004 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P005 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P006 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P006 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P007 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P007 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-7614 EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P008 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis O-SUCCINYLBENZOATE-COA-LIG-RXN EC-6.2.1.26 Zm00039ab267560 Zm00039ab267560_P008 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P001 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P001 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P002 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P002 NA DTDPRHAMSYN-PWY dTDP-L-rhamnose biosynthesis DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P003 conditional PWY-3221 dTDP-L-rhamnose biosynthesis II DTDPGLUCDEHYDRAT-RXN EC-4.2.1.46 Zm00039ab267640 Zm00039ab267640_P003 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab268660 Zm00039ab268660_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab268690 Zm00039ab268690_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab268690 Zm00039ab268690_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab268690 Zm00039ab268690_P001 manual PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab268920 Zm00039ab268920_P001 NA PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P003 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P004 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P004 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P005 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab269250 Zm00039ab269250_P005 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab269280 Zm00039ab269280_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab269280 Zm00039ab269280_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab269280 Zm00039ab269280_P003 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab269330 Zm00039ab269330_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab269330 Zm00039ab269330_P002 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab269330 Zm00039ab269330_P003 conditional PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab269510 Zm00039ab269510_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269530 Zm00039ab269530_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269530 Zm00039ab269530_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269530 Zm00039ab269530_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269540 Zm00039ab269540_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269540 Zm00039ab269540_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab269540 Zm00039ab269540_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab269580 Zm00039ab269580_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab269580 Zm00039ab269580_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab269580 Zm00039ab269580_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab269580 Zm00039ab269580_P004 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab269600 Zm00039ab269600_P002 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4141 EC-2.7.7.69 Zm00039ab269620 Zm00039ab269620_P001 viridiplantae PWY4FS-13 extended VTC2 cycle RXN4FS-13 EC-2.7.7.69 Zm00039ab269620 Zm00039ab269620_P001 conditional PWY4FS-12 VTC2 cycle RXN4FS-12 EC-2.7.7.69 Zm00039ab269620 Zm00039ab269620_P001 conditional ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P005 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P006 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P006 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P007 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P007 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P008 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P008 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P009 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I ACETYLORNTRANSAM-RXN EC-2.6.1.11 Zm00039ab269700 Zm00039ab269700_P009 viridiplantae GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P001 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P002 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P002 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P002 NA GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P003 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P003 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00039ab269770 Zm00039ab269770_P003 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P002 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P003 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P004 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P005 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab269990 Zm00039ab269990_P006 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab270090 Zm00039ab270090_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab270090 Zm00039ab270090_P002 expected PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00039ab270140 Zm00039ab270140_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00039ab270140 Zm00039ab270140_P002 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00039ab270140 Zm00039ab270140_P003 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00039ab270140 Zm00039ab270140_P004 ubiquitous PWY-2541 phytosterol biosynthesis (plants) CYCLOEUCALENOL-CYCLOISOMERASE-RXN EC-5.5.1.9 Zm00039ab270140 Zm00039ab270140_P005 ubiquitous PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab270310 Zm00039ab270310_P001 viridiplantae PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab270480 Zm00039ab270480_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab270500 Zm00039ab270500_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab270510 Zm00039ab270510_P001 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab271010 Zm00039ab271010_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab271010 Zm00039ab271010_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab271010 Zm00039ab271010_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab271010 Zm00039ab271010_P003 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab271010 Zm00039ab271010_P004 viridiplantae PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab271030 Zm00039ab271030_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab271030 Zm00039ab271030_P002 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab271030 Zm00039ab271030_P003 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab271030 Zm00039ab271030_P004 expected LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab271330 Zm00039ab271330_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab271330 Zm00039ab271330_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab271330 Zm00039ab271330_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab271370 Zm00039ab271370_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab271370 Zm00039ab271370_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab271370 Zm00039ab271370_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab271490 Zm00039ab271490_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab271660 Zm00039ab271660_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab271770 Zm00039ab271770_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab271770 Zm00039ab271770_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab271770 Zm00039ab271770_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab271770 Zm00039ab271770_P002 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab271800 Zm00039ab271800_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab271800 Zm00039ab271800_P002 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab272090 Zm00039ab272090_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab272100 Zm00039ab272100_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab272180 Zm00039ab272180_P001 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab272180 Zm00039ab272180_P002 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab272180 Zm00039ab272180_P003 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab272180 Zm00039ab272180_P004 ubiquitous PWY-181 photorespiration GLY3KIN-RXN EC-2.7.1.31 Zm00039ab272180 Zm00039ab272180_P005 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab272440 Zm00039ab272440_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab272440 Zm00039ab272440_P001 ubiquitous VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00039ab272490 Zm00039ab272490_P001 viridiplantae VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00039ab272490 Zm00039ab272490_P002 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab272750 Zm00039ab272750_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab272760 Zm00039ab272760_P001 conditional PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab273010 Zm00039ab273010_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab273160 Zm00039ab273160_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab273170 Zm00039ab273170_P001 expected PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab273310 Zm00039ab273310_P001 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab273310 Zm00039ab273310_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab273310 Zm00039ab273310_P001 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab273310 Zm00039ab273310_P001 NA PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P005 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab273640 Zm00039ab273640_P005 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab273680 Zm00039ab273680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab273680 Zm00039ab273680_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab273680 Zm00039ab273680_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab273680 Zm00039ab273680_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P003 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P004 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P005 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P006 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I RXN-9952 EC-1.1.1.44 Zm00039ab273710 Zm00039ab273710_P007 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab274010 Zm00039ab274010_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab274010 Zm00039ab274010_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab274010 Zm00039ab274010_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab274010 Zm00039ab274010_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab274010 Zm00039ab274010_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab274010 Zm00039ab274010_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab274190 Zm00039ab274190_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab274190 Zm00039ab274190_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab274190 Zm00039ab274190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab274190 Zm00039ab274190_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab274190 Zm00039ab274190_P001 NA PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab274290 Zm00039ab274290_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN EC-2.1.1.11 Zm00039ab274720 Zm00039ab274720_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab275060 Zm00039ab275060_P003 conditional PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00039ab275100 Zm00039ab275100_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab275210 Zm00039ab275210_P003 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab275330 Zm00039ab275330_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab275330 Zm00039ab275330_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab275370 Zm00039ab275370_P005 conditional PWY-5284 shisonin biosynthesis RXN-8204 EC-2.3.1.215 Zm00039ab275500 Zm00039ab275500_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8204 EC-2.3.1.215 Zm00039ab275500 Zm00039ab275500_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab275600 Zm00039ab275600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab275600 Zm00039ab275600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab275600 Zm00039ab275600_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab275740 Zm00039ab275740_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab275740 Zm00039ab275740_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab275740 Zm00039ab275740_P003 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab275820 Zm00039ab275820_P002 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab276000 Zm00039ab276000_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab276000 Zm00039ab276000_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab276000 Zm00039ab276000_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab276010 Zm00039ab276010_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab276010 Zm00039ab276010_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab276010 Zm00039ab276010_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab276030 Zm00039ab276030_P003 conditional PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab276130 Zm00039ab276130_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab276150 Zm00039ab276150_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab276150 Zm00039ab276150_P001 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab276380 Zm00039ab276380_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab276380 Zm00039ab276380_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab276380 Zm00039ab276380_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab276380 Zm00039ab276380_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab276380 Zm00039ab276380_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab276400 Zm00039ab276400_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab276400 Zm00039ab276400_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab276400 Zm00039ab276400_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab276400 Zm00039ab276400_P004 NA PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab276450 Zm00039ab276450_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab276450 Zm00039ab276450_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab276450 Zm00039ab276450_P003 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab276460 Zm00039ab276460_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab276460 Zm00039ab276460_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab276480 Zm00039ab276480_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P001 ubiquitous PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P002 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P002 ubiquitous PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P003 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab276670 Zm00039ab276670_P003 ubiquitous PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab276680 Zm00039ab276680_P001 viridiplantae PWY-2781 cis-zeatin biosynthesis RXN0-6274 EC-2.5.1.75 Zm00039ab276810 Zm00039ab276810_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab276930 Zm00039ab276930_P001 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab276930 Zm00039ab276930_P002 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab276930 Zm00039ab276930_P003 expected PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab276930 Zm00039ab276930_P004 expected PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab277040 Zm00039ab277040_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab277060 Zm00039ab277060_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab277070 Zm00039ab277070_P001 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab277170 Zm00039ab277170_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab277170 Zm00039ab277170_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab277640 Zm00039ab277640_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab277640 Zm00039ab277640_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CYCLOHEXADIENYL-DEHYDROGENASE-RXN EC-1.3.1.43 Zm00039ab277660 Zm00039ab277660_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab277780 Zm00039ab277780_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab277830 Zm00039ab277830_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P004 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) 2.7.7.44-RXN EC-2.7.7.44 Zm00039ab277910 Zm00039ab277910_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 expected PWY-3821 D-galactose detoxification UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 expected PWY-7343 UDP-α-D-glucose biosynthesis I GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 NA PWY-6527 stachyose degradation UTPHEXPURIDYLYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 expected PWY-7238 sucrose biosynthesis II GLUC1PURIDYLTRANS-RXN EC-2.7.7.64 Zm00039ab277910 Zm00039ab277910_P005 conditional PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P001 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P002 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P003 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P004 NA PWY-6543 4-aminobenzoate biosynthesis PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P005 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II PABASYN-RXN EC-2.6.1.85 Zm00039ab277990 Zm00039ab277990_P005 NA PWY1F-353 glycine betaine biosynthesis III (plants) RXN1F-357 EC-1.14.15.7 Zm00039ab278050 Zm00039ab278050_P001 expected LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab278270 Zm00039ab278270_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab278410 Zm00039ab278410_P001 expected PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab278980 Zm00039ab278980_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab278980 Zm00039ab278980_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab278980 Zm00039ab278980_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P002 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P002 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P002 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P002 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P003 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P003 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P003 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab279240 Zm00039ab279240_P003 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab279500 Zm00039ab279500_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279590 Zm00039ab279590_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab279650 Zm00039ab279650_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab279930 Zm00039ab279930_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab279930 Zm00039ab279930_P001 expected PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab280100 Zm00039ab280100_P004 ubiquitous SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab280400 Zm00039ab280400_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab280550 Zm00039ab280550_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab280550 Zm00039ab280550_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab280550 Zm00039ab280550_P002 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab280610 Zm00039ab280610_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab280610 Zm00039ab280610_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab280610 Zm00039ab280610_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab280610 Zm00039ab280610_P004 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab280610 Zm00039ab280610_P005 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab280780 Zm00039ab280780_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab280780 Zm00039ab280780_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab280780 Zm00039ab280780_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab280780 Zm00039ab280780_P004 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab280780 Zm00039ab280780_P005 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab281410 Zm00039ab281410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab281410 Zm00039ab281410_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab281410 Zm00039ab281410_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab281430 Zm00039ab281430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab281430 Zm00039ab281430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab281430 Zm00039ab281430_P001 conditional PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab281560 Zm00039ab281560_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab281570 Zm00039ab281570_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab281750 Zm00039ab281750_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab281750 Zm00039ab281750_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab281750 Zm00039ab281750_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab281750 Zm00039ab281750_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab281750 Zm00039ab281750_P001 NA PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab281860 Zm00039ab281860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8679 EC-1.23.1.2 Zm00039ab281860 Zm00039ab281860_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab282010 Zm00039ab282010_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab282020 Zm00039ab282020_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab282060 Zm00039ab282060_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab282190 Zm00039ab282190_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab282260 Zm00039ab282260_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab282290 Zm00039ab282290_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab282290 Zm00039ab282290_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab282290 Zm00039ab282290_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab282540 Zm00039ab282540_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab282540 Zm00039ab282540_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab282540 Zm00039ab282540_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab282550 Zm00039ab282550_P001 ubiquitous CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab282590 Zm00039ab282590_P003 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab282710 Zm00039ab282710_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab282740 Zm00039ab282740_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab282740 Zm00039ab282740_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab282770 Zm00039ab282770_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab282770 Zm00039ab282770_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab282770 Zm00039ab282770_P003 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab283190 Zm00039ab283190_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab283200 Zm00039ab283200_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab283320 Zm00039ab283320_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab283400 Zm00039ab283400_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab283400 Zm00039ab283400_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab283400 Zm00039ab283400_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab283400 Zm00039ab283400_P004 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab283400 Zm00039ab283400_P005 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab283520 Zm00039ab283520_P003 expected PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00039ab283550 Zm00039ab283550_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab283640 Zm00039ab283640_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab283640 Zm00039ab283640_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab283640 Zm00039ab283640_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab283640 Zm00039ab283640_P004 viridiplantae PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab283650 Zm00039ab283650_P001 conditional PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab283690 Zm00039ab283690_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab283770 Zm00039ab283770_P001 viridiplantae PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab283810 Zm00039ab283810_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab283810 Zm00039ab283810_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab283940 Zm00039ab283940_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab283940 Zm00039ab283940_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab283940 Zm00039ab283940_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab283940 Zm00039ab283940_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab283940 Zm00039ab283940_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab283990 Zm00039ab283990_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab283990 Zm00039ab283990_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab283990 Zm00039ab283990_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab283990 Zm00039ab283990_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab283990 Zm00039ab283990_P005 viridiplantae PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00039ab284110 Zm00039ab284110_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P001 NA PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P002 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P002 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P002 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P002 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P002 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00039ab284110 Zm00039ab284110_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P003 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P003 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P003 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P003 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P003 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINEPHOSPHOTRANSFERASE-RXN EC-2.7.8.1 Zm00039ab284110 Zm00039ab284110_P004 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P004 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P004 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P004 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P004 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab284110 Zm00039ab284110_P004 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab284280 Zm00039ab284280_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab284480 Zm00039ab284480_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab284480 Zm00039ab284480_P002 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab284580 Zm00039ab284580_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab284580 Zm00039ab284580_P001 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P003 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P004 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P004 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P005 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab284690 Zm00039ab284690_P005 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab284760 Zm00039ab284760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab284930 Zm00039ab284930_P001 viridiplantae PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab285060 Zm00039ab285060_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab285060 Zm00039ab285060_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab285160 Zm00039ab285160_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab285170 Zm00039ab285170_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab285270 Zm00039ab285270_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab285270 Zm00039ab285270_P002 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab285330 Zm00039ab285330_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab285330 Zm00039ab285330_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab285330 Zm00039ab285330_P003 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab285330 Zm00039ab285330_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285460 Zm00039ab285460_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285460 Zm00039ab285460_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285460 Zm00039ab285460_P003 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab285540 Zm00039ab285540_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab285660 Zm00039ab285660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285790 Zm00039ab285790_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285790 Zm00039ab285790_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285790 Zm00039ab285790_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab285790 Zm00039ab285790_P004 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab286100 Zm00039ab286100_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab286100 Zm00039ab286100_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab286100 Zm00039ab286100_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab286140 Zm00039ab286140_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab286140 Zm00039ab286140_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab286140 Zm00039ab286140_P003 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab286190 Zm00039ab286190_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab286190 Zm00039ab286190_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab286190 Zm00039ab286190_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab286190 Zm00039ab286190_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab286260 Zm00039ab286260_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab286260 Zm00039ab286260_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab286260 Zm00039ab286260_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab286260 Zm00039ab286260_P004 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab286360 Zm00039ab286360_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab286360 Zm00039ab286360_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab286360 Zm00039ab286360_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab286700 Zm00039ab286700_P001 expected GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab286720 Zm00039ab286720_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab286790 Zm00039ab286790_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab286790 Zm00039ab286790_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab286790 Zm00039ab286790_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab286830 Zm00039ab286830_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab286830 Zm00039ab286830_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab286830 Zm00039ab286830_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab286930 Zm00039ab286930_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P005 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRAISOM-RXN EC-5.3.1.24 Zm00039ab287050 Zm00039ab287050_P006 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab287120 Zm00039ab287120_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab287120 Zm00039ab287120_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab287120 Zm00039ab287120_P003 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab287240 Zm00039ab287240_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab287240 Zm00039ab287240_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab287240 Zm00039ab287240_P003 expected PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00039ab287350 Zm00039ab287350_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab287420 Zm00039ab287420_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab287450 Zm00039ab287450_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab287450 Zm00039ab287450_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab287510 Zm00039ab287510_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab287510 Zm00039ab287510_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab287530 Zm00039ab287530_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab287530 Zm00039ab287530_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab287620 Zm00039ab287620_P002 NA PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00039ab287730 Zm00039ab287730_P001 expected PWY66-423 fructose 2,6-bisphosphate biosynthesis 6-PHOSPHOFRUCTO-2-KINASE-RXN EC-2.7.1.105 Zm00039ab287730 Zm00039ab287730_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab287900 Zm00039ab287900_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287900 Zm00039ab287900_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287900 Zm00039ab287900_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab287930 Zm00039ab287930_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab288040 Zm00039ab288040_P001 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab288040 Zm00039ab288040_P002 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab288170 Zm00039ab288170_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab288350 Zm00039ab288350_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab288360 Zm00039ab288360_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab288410 Zm00039ab288410_P001 expected PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00039ab288530 Zm00039ab288530_P001 viridiplantae PWY-6599 guanine and guanosine salvage II GUANPRIBOSYLTRAN-RXN EC-2.4.2.8 Zm00039ab288530 Zm00039ab288530_P002 viridiplantae PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00039ab288630 Zm00039ab288630_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-170 EC-1.14.11.15 Zm00039ab288630 Zm00039ab288630_P002 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab288650 Zm00039ab288650_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab288650 Zm00039ab288650_P001 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab288700 Zm00039ab288700_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab288700 Zm00039ab288700_P002 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab288740 Zm00039ab288740_P002 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab288860 Zm00039ab288860_P001 expected PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab289050 Zm00039ab289050_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab289090 Zm00039ab289090_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab289090 Zm00039ab289090_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab289110 Zm00039ab289110_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab289110 Zm00039ab289110_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289170 Zm00039ab289170_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab289180 Zm00039ab289180_P002 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab289230 Zm00039ab289230_P002 manual PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab289240 Zm00039ab289240_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab289370 Zm00039ab289370_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab289490 Zm00039ab289490_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab289530 Zm00039ab289530_P001 conditional PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab289650 Zm00039ab289650_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab289820 Zm00039ab289820_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab289820 Zm00039ab289820_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab289860 Zm00039ab289860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab289860 Zm00039ab289860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab289860 Zm00039ab289860_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab289860 Zm00039ab289860_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab289860 Zm00039ab289860_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab289880 Zm00039ab289880_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab289880 Zm00039ab289880_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab289880 Zm00039ab289880_P003 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab289880 Zm00039ab289880_P004 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab289910 Zm00039ab289910_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab289920 Zm00039ab289920_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00039ab289970 Zm00039ab289970_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00039ab289970 Zm00039ab289970_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab289980 Zm00039ab289980_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab289980 Zm00039ab289980_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab289980 Zm00039ab289980_P001 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab290060 Zm00039ab290060_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab290060 Zm00039ab290060_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab290060 Zm00039ab290060_P003 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab290060 Zm00039ab290060_P004 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab290070 Zm00039ab290070_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab290070 Zm00039ab290070_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab290070 Zm00039ab290070_P003 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab290070 Zm00039ab290070_P004 viridiplantae PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab290070 Zm00039ab290070_P005 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab290080 Zm00039ab290080_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab290140 Zm00039ab290140_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab290140 Zm00039ab290140_P002 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab290140 Zm00039ab290140_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab290520 Zm00039ab290520_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab290540 Zm00039ab290540_P002 conditional PWY-6124 inosine-5'-phosphate biosynthesis II SAICARSYN-RXN EC-6.3.2.6 Zm00039ab290600 Zm00039ab290600_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab290840 Zm00039ab290840_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab290840 Zm00039ab290840_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab290860 Zm00039ab290860_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab291050 Zm00039ab291050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab291050 Zm00039ab291050_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab291130 Zm00039ab291130_P003 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab291240 Zm00039ab291240_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab291260 Zm00039ab291260_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab291260 Zm00039ab291260_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab291290 Zm00039ab291290_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab291290 Zm00039ab291290_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab291290 Zm00039ab291290_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab291380 Zm00039ab291380_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P001 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab291440 Zm00039ab291440_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab291480 Zm00039ab291480_P002 ubiquitous GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291590 Zm00039ab291590_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab291600 Zm00039ab291600_P003 manual MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab291930 Zm00039ab291930_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab291930 Zm00039ab291930_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab291930 Zm00039ab291930_P003 viridiplantae PWY-5068 chlorophyll cycle RXN1F-66 EC-2.5.1.62 Zm00039ab291940 Zm00039ab291940_P001 expected PWY-5086 chlorophyll a biosynthesis I RXN1F-66 EC-2.5.1.62 Zm00039ab291940 Zm00039ab291940_P001 expected PWY-5064 chlorophyll a biosynthesis II RXN-7663 EC-2.5.1.62 Zm00039ab291940 Zm00039ab291940_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab292180 Zm00039ab292180_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab292240 Zm00039ab292240_P001 ubiquitous PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab292660 Zm00039ab292660_P001 expected PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab293140 Zm00039ab293140_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab293170 Zm00039ab293170_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab293170 Zm00039ab293170_P001 conditional HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00039ab293370 Zm00039ab293370_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis PRIBFAICARPISOM-RXN EC-5.3.1.16 Zm00039ab293370 Zm00039ab293370_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293540 Zm00039ab293540_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P004 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P005 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P005 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P006 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab293570 Zm00039ab293570_P006 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab293610 Zm00039ab293610_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab293610 Zm00039ab293610_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab293610 Zm00039ab293610_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab293630 Zm00039ab293630_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab293630 Zm00039ab293630_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab293660 Zm00039ab293660_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab293660 Zm00039ab293660_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab293660 Zm00039ab293660_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab293660 Zm00039ab293660_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab293710 Zm00039ab293710_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab293720 Zm00039ab293720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab293720 Zm00039ab293720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab293720 Zm00039ab293720_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab293730 Zm00039ab293730_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab293730 Zm00039ab293730_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab293730 Zm00039ab293730_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab293890 Zm00039ab293890_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab293890 Zm00039ab293890_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab293890 Zm00039ab293890_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P005 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P005 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P005 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P005 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P005 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P006 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P006 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P006 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P006 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P006 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P007 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P007 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P007 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P007 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab293900 Zm00039ab293900_P007 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab293930 Zm00039ab293930_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab294050 Zm00039ab294050_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab294070 Zm00039ab294070_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab294070 Zm00039ab294070_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab294070 Zm00039ab294070_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab294070 Zm00039ab294070_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab294070 Zm00039ab294070_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P002 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P002 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P002 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P003 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P003 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P003 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab295100 Zm00039ab295100_P004 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P004 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P004 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P004 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab295100 Zm00039ab295100_P004 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab295160 Zm00039ab295160_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab295160 Zm00039ab295160_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab295230 Zm00039ab295230_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab295320 Zm00039ab295320_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab295410 Zm00039ab295410_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab295410 Zm00039ab295410_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab295410 Zm00039ab295410_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab295410 Zm00039ab295410_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab295410 Zm00039ab295410_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab295410 Zm00039ab295410_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab295410 Zm00039ab295410_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab295410 Zm00039ab295410_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab295410 Zm00039ab295410_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab295410 Zm00039ab295410_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab295410 Zm00039ab295410_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab295410 Zm00039ab295410_P001 viridiplantae PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab295440 Zm00039ab295440_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab295440 Zm00039ab295440_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab295440 Zm00039ab295440_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab295440 Zm00039ab295440_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab295480 Zm00039ab295480_P003 NA PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab295510 Zm00039ab295510_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab295510 Zm00039ab295510_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab295760 Zm00039ab295760_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab295760 Zm00039ab295760_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab295850 Zm00039ab295850_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab295850 Zm00039ab295850_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab295850 Zm00039ab295850_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00039ab295850 Zm00039ab295850_P001 NA GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab296360 Zm00039ab296360_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab296360 Zm00039ab296360_P002 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab296400 Zm00039ab296400_P001 expected GLYSYN-ALA-PWY glycine biosynthesis III ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN EC-2.6.1.44 Zm00039ab296400 Zm00039ab296400_P002 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab296660 Zm00039ab296660_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab296660 Zm00039ab296660_P002 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab296660 Zm00039ab296660_P003 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab296660 Zm00039ab296660_P004 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-35528 EC-2.3.1.87 Zm00039ab296660 Zm00039ab296660_P005 conditional PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab296710 Zm00039ab296710_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab297120 Zm00039ab297120_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab297120 Zm00039ab297120_P003 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab297120 Zm00039ab297120_P004 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab297120 Zm00039ab297120_P006 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab297130 Zm00039ab297130_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab297130 Zm00039ab297130_P002 NA PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00039ab297190 Zm00039ab297190_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GSAAMINOTRANS-RXN EC-5.4.3.8 Zm00039ab297190 Zm00039ab297190_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab297430 Zm00039ab297430_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297580 Zm00039ab297580_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab297590 Zm00039ab297590_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297590 Zm00039ab297590_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab297590 Zm00039ab297590_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P001 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P001 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P002 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P002 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P002 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P003 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P003 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P003 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P003 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P004 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1623 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P004 viridiplantae PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15043 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P004 expected PWY0-1319 CDP-diacylglycerol biosynthesis II 1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4388 EC-2.3.1.51 Zm00039ab297740 Zm00039ab297740_P004 NA SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00039ab297800 Zm00039ab297800_P001 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00039ab297800 Zm00039ab297800_P002 viridiplantae SULFMETII-PWY assimilatory sulfate reduction II SULFITE-REDUCTASE-FERREDOXIN-RXN EC-1.8.7.1 Zm00039ab297800 Zm00039ab297800_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab297830 Zm00039ab297830_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab297970 Zm00039ab297970_P002 conditional PWY-5474 hydroxycinnamic acid tyramine amides biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab298230 Zm00039ab298230_P001 conditional PWY-6802 salidroside biosynthesis TYROSINE-DECARBOXYLASE-RXN EC-4.1.1.25 Zm00039ab298230 Zm00039ab298230_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab298320 Zm00039ab298320_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab298320 Zm00039ab298320_P002 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab298380 Zm00039ab298380_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab298380 Zm00039ab298380_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00039ab298380 Zm00039ab298380_P001 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab298540 Zm00039ab298540_P001 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXN-11433 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXN-11432 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXN-11431 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11664 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-11430 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXN-11434 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWY-7901 glucosinolate biosynthesis from tyrosine RXN-18759 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 NA PWY-2821 glucosinolate biosynthesis from phenylalanine RXN-11428 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXN-11435 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional PWY-601 glucosinolate biosynthesis from tryptophan RXN-11429 EC-3.4.19.16 Zm00039ab298700 Zm00039ab298700_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab298830 Zm00039ab298830_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab298830 Zm00039ab298830_P002 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298870 Zm00039ab298870_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298870 Zm00039ab298870_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298870 Zm00039ab298870_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298910 Zm00039ab298910_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298910 Zm00039ab298910_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab298910 Zm00039ab298910_P001 manual CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab298960 Zm00039ab298960_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab298960 Zm00039ab298960_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab298960 Zm00039ab298960_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab298960 Zm00039ab298960_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab298970 Zm00039ab298970_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab298970 Zm00039ab298970_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab298970 Zm00039ab298970_P003 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab299120 Zm00039ab299120_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab299120 Zm00039ab299120_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab299120 Zm00039ab299120_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab299310 Zm00039ab299310_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab299320 Zm00039ab299320_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab299320 Zm00039ab299320_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab299320 Zm00039ab299320_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab299440 Zm00039ab299440_P001 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab299480 Zm00039ab299480_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab299480 Zm00039ab299480_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab299480 Zm00039ab299480_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab299480 Zm00039ab299480_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab299480 Zm00039ab299480_P001 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab299550 Zm00039ab299550_P001 viridiplantae PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab299710 Zm00039ab299710_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab299710 Zm00039ab299710_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab299720 Zm00039ab299720_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab299760 Zm00039ab299760_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab299760 Zm00039ab299760_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab299760 Zm00039ab299760_P002 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab299760 Zm00039ab299760_P002 excluded PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab299790 Zm00039ab299790_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab299820 Zm00039ab299820_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab299820 Zm00039ab299820_P001 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P001 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P002 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P003 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P004 viridiplantae ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab299910 Zm00039ab299910_P005 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P002 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P003 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab300120 Zm00039ab300120_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab300220 Zm00039ab300220_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab300220 Zm00039ab300220_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab300220 Zm00039ab300220_P001 conditional PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab300560 Zm00039ab300560_P003 ubiquitous HOMOSER-THRESYN-PWY L-threonine biosynthesis THRESYN-RXN EC-4.2.3.1 Zm00039ab300720 Zm00039ab300720_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab300730 Zm00039ab300730_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab300740 Zm00039ab300740_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab300740 Zm00039ab300740_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab300740 Zm00039ab300740_P003 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab300810 Zm00039ab300810_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab300940 Zm00039ab300940_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00039ab300940 Zm00039ab300940_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab301130 Zm00039ab301130_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab301130 Zm00039ab301130_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab301130 Zm00039ab301130_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab301130 Zm00039ab301130_P002 conditional GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab301180 Zm00039ab301180_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab301180 Zm00039ab301180_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab301230 Zm00039ab301230_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab301230 Zm00039ab301230_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab301230 Zm00039ab301230_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab301420 Zm00039ab301420_P001 viridiplantae PWY0-501 lipoate biosynthesis and incorporation I RXN0-947 EC-2.3.1.181 Zm00039ab301430 Zm00039ab301430_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab301480 Zm00039ab301480_P001 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab301590 Zm00039ab301590_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab301700 Zm00039ab301700_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab302090 Zm00039ab302090_P002 conditional PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab302200 Zm00039ab302200_P001 NA PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab302280 Zm00039ab302280_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab302280 Zm00039ab302280_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab302320 Zm00039ab302320_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab302320 Zm00039ab302320_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab302330 Zm00039ab302330_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab302330 Zm00039ab302330_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab302350 Zm00039ab302350_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab302350 Zm00039ab302350_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab302350 Zm00039ab302350_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab302350 Zm00039ab302350_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab302430 Zm00039ab302430_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab302430 Zm00039ab302430_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab302440 Zm00039ab302440_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab302440 Zm00039ab302440_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P002 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab302450 Zm00039ab302450_P003 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab302480 Zm00039ab302480_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab302480 Zm00039ab302480_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab302480 Zm00039ab302480_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab302520 Zm00039ab302520_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab302520 Zm00039ab302520_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab303010 Zm00039ab303010_P001 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab303010 Zm00039ab303010_P002 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab303010 Zm00039ab303010_P003 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab303010 Zm00039ab303010_P004 viridiplantae PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab303010 Zm00039ab303010_P005 viridiplantae PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab303110 Zm00039ab303110_P001 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00039ab303110 Zm00039ab303110_P001 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab303110 Zm00039ab303110_P001 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00039ab303110 Zm00039ab303110_P001 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00039ab303110 Zm00039ab303110_P001 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab303110 Zm00039ab303110_P002 viridiplantae HEXPPSYN-PWY hexaprenyl diphosphate biosynthesis TRANS-PENTAPRENYLTRANSFERASE-RXN EC-2.5.1.83 Zm00039ab303110 Zm00039ab303110_P002 conditional PWY-5805 nonaprenyl diphosphate biosynthesis I TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.84 Zm00039ab303110 Zm00039ab303110_P002 expected PWY-6520 nonaprenyl diphosphate biosynthesis II RXN-11486 EC-2.5.1.85 Zm00039ab303110 Zm00039ab303110_P002 expected PWY-5783 octaprenyl diphosphate biosynthesis RXN-8992 EC-2.5.1.90 Zm00039ab303110 Zm00039ab303110_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab303430 Zm00039ab303430_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab303570 Zm00039ab303570_P001 viridiplantae LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab303600 Zm00039ab303600_P001 viridiplantae PWYQT-4450 aliphatic glucosinolate biosynthesis, side chain elongation cycle RXNQT-4163 EC-2.3.3.17 Zm00039ab303600 Zm00039ab303600_P001 conditional PWY-1186 L-homomethionine biosynthesis RXN-2202 EC-2.3.3.17 Zm00039ab303600 Zm00039ab303600_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab303610 Zm00039ab303610_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab303610 Zm00039ab303610_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab303640 Zm00039ab303640_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab303800 Zm00039ab303800_P001 ubiquitous PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab303810 Zm00039ab303810_P001 excluded PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab303860 Zm00039ab303860_P001 expected PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab303950 Zm00039ab303950_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab303960 Zm00039ab303960_P001 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab303960 Zm00039ab303960_P002 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab304050 Zm00039ab304050_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab304050 Zm00039ab304050_P001 conditional PWY-3041 monoterpene biosynthesis RXN-5110 EC-4.2.3.15 Zm00039ab304140 Zm00039ab304140_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab304240 Zm00039ab304240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304240 Zm00039ab304240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304240 Zm00039ab304240_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab304250 Zm00039ab304250_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304250 Zm00039ab304250_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304250 Zm00039ab304250_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab304260 Zm00039ab304260_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304260 Zm00039ab304260_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304260 Zm00039ab304260_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab304270 Zm00039ab304270_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304270 Zm00039ab304270_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab304270 Zm00039ab304270_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab304300 Zm00039ab304300_P001 viridiplantae PWY-6466 pyridoxal 5'-phosphate biosynthesis II RXN-11322 EC-4.3.3.6 Zm00039ab304400 Zm00039ab304400_P001 conditional PWY-181 photorespiration GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab304460 Zm00039ab304460_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYCINE-AMINOTRANSFERASE-RXN EC-2.6.1.4 Zm00039ab304460 Zm00039ab304460_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab304490 Zm00039ab304490_P001 viridiplantae PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P002 conditional PWYQT-4473 glucosinolate biosynthesis from tetrahomomethionine RXNQT-4336 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWYQT-4472 glucosinolate biosynthesis from trihomomethionine RXNQT-4335 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWYQT-4471 glucosinolate biosynthesis from dihomomethionine RXNQT-4334 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWY-1187 glucosinolate biosynthesis from homomethionine RXN-2221 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWYQT-4474 glucosinolate biosynthesis from pentahomomethionine RXNQT-4337 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWYQT-4475 glucosinolate biosynthesis from hexahomomethionine RXNQT-4338 EC-1.14.13.237 Zm00039ab304550 Zm00039ab304550_P003 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab304600 Zm00039ab304600_P001 expected PWY-381 nitrate reduction II (assimilatory) FERREDOXIN--NITRITE-REDUCTASE-RXN EC-1.7.7.1 Zm00039ab305340 Zm00039ab305340_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P002 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P002 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P002 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P003 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P003 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab305530 Zm00039ab305530_P003 NA PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab305600 Zm00039ab305600_P001 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab305850 Zm00039ab305850_P001 NA PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab305940 Zm00039ab305940_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab305940 Zm00039ab305940_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab306020 Zm00039ab306020_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab306080 Zm00039ab306080_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab306080 Zm00039ab306080_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab306080 Zm00039ab306080_P001 conditional PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab306090 Zm00039ab306090_P001 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab306090 Zm00039ab306090_P002 ubiquitous PWY-181 photorespiration RXN-969 EC-1.1.3.15 Zm00039ab306090 Zm00039ab306090_P003 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab306140 Zm00039ab306140_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00039ab306430 Zm00039ab306430_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00039ab306430 Zm00039ab306430_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00039ab306430 Zm00039ab306430_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab306440 Zm00039ab306440_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab306440 Zm00039ab306440_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab306440 Zm00039ab306440_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab306450 Zm00039ab306450_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab306450 Zm00039ab306450_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab306450 Zm00039ab306450_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab306460 Zm00039ab306460_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab306460 Zm00039ab306460_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab306460 Zm00039ab306460_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab306480 Zm00039ab306480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab306480 Zm00039ab306480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab306480 Zm00039ab306480_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab306520 Zm00039ab306520_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab306520 Zm00039ab306520_P002 viridiplantae PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab306580 Zm00039ab306580_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab307140 Zm00039ab307140_P001 viridiplantae PWY-5723 Rubisco shunt RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab307140 Zm00039ab307140_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIB5PISOM-RXN EC-5.3.1.6 Zm00039ab307140 Zm00039ab307140_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab307160 Zm00039ab307160_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00039ab307270 Zm00039ab307270_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) PANTEPADENYLYLTRAN-RXN EC-2.7.7.3 Zm00039ab307270 Zm00039ab307270_P001 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab307360 Zm00039ab307360_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab307360 Zm00039ab307360_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab307360 Zm00039ab307360_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab307360 Zm00039ab307360_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab307430 Zm00039ab307430_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis RXN0-2381 EC-4.1.2.8 Zm00039ab307430 Zm00039ab307430_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab307790 Zm00039ab307790_P001 conditional PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00039ab307990 Zm00039ab307990_P001 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00039ab307990 Zm00039ab307990_P002 NA PWYQT-1 lysine degradation III RXN-14932 EC-1.1.99.39 Zm00039ab307990 Zm00039ab307990_P003 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab308080 Zm00039ab308080_P001 expected VALDEG-PWY L-valine degradation I RXN-11213 EC-1.2.1.27 Zm00039ab308090 Zm00039ab308090_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab308130 Zm00039ab308130_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab308130 Zm00039ab308130_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab308130 Zm00039ab308130_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab308130 Zm00039ab308130_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab308180 Zm00039ab308180_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation RXN0-6373 EC-1.1.5.2 Zm00039ab308390 Zm00039ab308390_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab308520 Zm00039ab308520_P001 expected PWY-5203 soybean saponin I biosynthesis RXN-12320 EC-2.4.1.273 Zm00039ab308580 Zm00039ab308580_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab308700 Zm00039ab308700_P002 expected PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab308830 Zm00039ab308830_P001 ubiquitous PWY-2541 phytosterol biosynthesis (plants) RXN-4021 EC-2.1.1.41 Zm00039ab308830 Zm00039ab308830_P002 ubiquitous PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab308920 Zm00039ab308920_P001 viridiplantae PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab309030 Zm00039ab309030_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab309030 Zm00039ab309030_P002 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab309030 Zm00039ab309030_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.82-RXN EC-2.4.1.82 Zm00039ab309030 Zm00039ab309030_P004 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab309040 Zm00039ab309040_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab309110 Zm00039ab309110_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab309300 Zm00039ab309300_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab309300 Zm00039ab309300_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab309300 Zm00039ab309300_P003 NA PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab309490 Zm00039ab309490_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab309500 Zm00039ab309500_P001 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P002 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P003 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P004 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P005 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab309520 Zm00039ab309520_P006 expected PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab309620 Zm00039ab309620_P001 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab309620 Zm00039ab309620_P002 NA PWY-6213 cadmium transport I 3.6.3.3-RXN EC-3.6.3.3 Zm00039ab309620 Zm00039ab309620_P003 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab309660 Zm00039ab309660_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab309660 Zm00039ab309660_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab309660 Zm00039ab309660_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab309660 Zm00039ab309660_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab309660 Zm00039ab309660_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab309810 Zm00039ab309810_P001 viridiplantae PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab309940 Zm00039ab309940_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab309950 Zm00039ab309950_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab309960 Zm00039ab309960_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab309990 Zm00039ab309990_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab309990 Zm00039ab309990_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310010 Zm00039ab310010_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310010 Zm00039ab310010_P002 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310010 Zm00039ab310010_P003 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310010 Zm00039ab310010_P004 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310070 Zm00039ab310070_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab310070 Zm00039ab310070_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab310080 Zm00039ab310080_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab310130 Zm00039ab310130_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab310160 Zm00039ab310160_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II GUANINE-DEAMINASE-RXN EC-3.5.4.3 Zm00039ab310160 Zm00039ab310160_P002 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab310450 Zm00039ab310450_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab310450 Zm00039ab310450_P002 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310870 Zm00039ab310870_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310870 Zm00039ab310870_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310870 Zm00039ab310870_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310880 Zm00039ab310880_P001 viridiplantae PWY-1581 plastoquinol-9 biosynthesis I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310880 Zm00039ab310880_P001 viridiplantae TYRFUMCAT-PWY L-tyrosine degradation I 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN EC-1.13.11.27 Zm00039ab310880 Zm00039ab310880_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab310940 Zm00039ab310940_P001 conditional PWY-3181 L-tryptophan degradation VI (via tryptamine) INDOLE-3-ACETALDEHYDE-OXIDASE-RXN EC-1.2.3.7 Zm00039ab310940 Zm00039ab310940_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab311020 Zm00039ab311020_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab311150 Zm00039ab311150_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab311160 Zm00039ab311160_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab311170 Zm00039ab311170_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab311230 Zm00039ab311230_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab311390 Zm00039ab311390_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab311470 Zm00039ab311470_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab311470 Zm00039ab311470_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab311470 Zm00039ab311470_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab311470 Zm00039ab311470_P002 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab311480 Zm00039ab311480_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab311480 Zm00039ab311480_P002 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab311480 Zm00039ab311480_P003 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab311480 Zm00039ab311480_P004 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab311590 Zm00039ab311590_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab311590 Zm00039ab311590_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab311590 Zm00039ab311590_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab311650 Zm00039ab311650_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab311650 Zm00039ab311650_P002 viridiplantae PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab311830 Zm00039ab311830_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab311830 Zm00039ab311830_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab311830 Zm00039ab311830_P003 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab311870 Zm00039ab311870_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab312000 Zm00039ab312000_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab312000 Zm00039ab312000_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab312040 Zm00039ab312040_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab312040 Zm00039ab312040_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab312040 Zm00039ab312040_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab312040 Zm00039ab312040_P002 ubiquitous PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab312080 Zm00039ab312080_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab312080 Zm00039ab312080_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab312080 Zm00039ab312080_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab312080 Zm00039ab312080_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab312080 Zm00039ab312080_P001 NA PWY-3301 sinapate ester biosynthesis 2.3.1.91-RXN EC-2.3.1.91 Zm00039ab312120 Zm00039ab312120_P002 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P004 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P005 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P006 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P007 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P008 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P009 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab312280 Zm00039ab312280_P010 expected PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P002 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P003 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P003 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P004 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P004 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab312420 Zm00039ab312420_P005 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P005 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab312420 Zm00039ab312420_P005 viridiplantae PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab312430 Zm00039ab312430_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab312430 Zm00039ab312430_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab312430 Zm00039ab312430_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab312430 Zm00039ab312430_P001 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab312510 Zm00039ab312510_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab312510 Zm00039ab312510_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab312510 Zm00039ab312510_P003 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab312620 Zm00039ab312620_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab312640 Zm00039ab312640_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab312640 Zm00039ab312640_P002 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab312640 Zm00039ab312640_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab312640 Zm00039ab312640_P003 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab312640 Zm00039ab312640_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab312690 Zm00039ab312690_P001 viridiplantae PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00039ab312780 Zm00039ab312780_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P004 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P005 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P006 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN EC-2.3.1.191 Zm00039ab312830 Zm00039ab312830_P007 expected PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab312960 Zm00039ab312960_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab312960 Zm00039ab312960_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab312960 Zm00039ab312960_P003 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P001 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P002 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P002 excluded PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P003 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab313000 Zm00039ab313000_P003 excluded PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P001 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P002 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P003 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P004 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P005 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P006 NA PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ARYLFORMAMIDASE-RXN EC-3.5.1.9 Zm00039ab313200 Zm00039ab313200_P007 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab313510 Zm00039ab313510_P001 expected MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab313580 Zm00039ab313580_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab313650 Zm00039ab313650_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P002 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P003 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P003 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P004 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P004 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P005 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P005 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P006 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P006 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P007 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab313660 Zm00039ab313660_P007 conditional PWY-5098 chlorophyll a degradation I RXN-7738 EC-3.1.1.14 Zm00039ab313670 Zm00039ab313670_P001 expected PWY-6927 chlorophyll a degradation II RXN-8357 EC-3.1.1.14 Zm00039ab313670 Zm00039ab313670_P001 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab313800 Zm00039ab313800_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab313800 Zm00039ab313800_P001 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab314040 Zm00039ab314040_P001 ubiquitous PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab314070 Zm00039ab314070_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab314070 Zm00039ab314070_P001 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P003 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P004 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P004 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P005 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P005 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P006 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab314360 Zm00039ab314360_P006 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab314400 Zm00039ab314400_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab314400 Zm00039ab314400_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab314400 Zm00039ab314400_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab314660 Zm00039ab314660_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab314660 Zm00039ab314660_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab314660 Zm00039ab314660_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab314660 Zm00039ab314660_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab314660 Zm00039ab314660_P005 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9635 EC-1.3.1.9 Zm00039ab314810 Zm00039ab314810_P001 viridiplantae FASYN-ELONG-PWY fatty acid elongation -- saturated ENOYL-ACP-REDUCT-NADH-RXN EC-1.3.1.9 Zm00039ab314810 Zm00039ab314810_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9558 EC-1.3.1.9 Zm00039ab314810 Zm00039ab314810_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9657 EC-1.3.1.9 Zm00039ab314810 Zm00039ab314810_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab315150 Zm00039ab315150_P001 conditional PWY-5659 GDP-mannose biosynthesis PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab315150 Zm00039ab315150_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) PHOSMANMUT-RXN EC-5.4.2.8 Zm00039ab315150 Zm00039ab315150_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab315260 Zm00039ab315260_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab315260 Zm00039ab315260_P002 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P002 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab315260 Zm00039ab315260_P003 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P003 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab315260 Zm00039ab315260_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab315280 Zm00039ab315280_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab315280 Zm00039ab315280_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab315280 Zm00039ab315280_P001 NA PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab315350 Zm00039ab315350_P001 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab315420 Zm00039ab315420_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab315420 Zm00039ab315420_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab315430 Zm00039ab315430_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab315430 Zm00039ab315430_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab315460 Zm00039ab315460_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab315470 Zm00039ab315470_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab315660 Zm00039ab315660_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab315660 Zm00039ab315660_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab315660 Zm00039ab315660_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P005 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab315730 Zm00039ab315730_P006 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab315740 Zm00039ab315740_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab315740 Zm00039ab315740_P002 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab315940 Zm00039ab315940_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab315940 Zm00039ab315940_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab315940 Zm00039ab315940_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab315940 Zm00039ab315940_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316010 Zm00039ab316010_P001 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab316050 Zm00039ab316050_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab316050 Zm00039ab316050_P002 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab316050 Zm00039ab316050_P003 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab316050 Zm00039ab316050_P004 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab316080 Zm00039ab316080_P001 expected PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P001 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P001 conditional PWY-6898 thiamine salvage III THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P002 expected PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) THIAMIN-PYROPHOSPHOKINASE-RXN EC-2.7.6.2 Zm00039ab316160 Zm00039ab316160_P002 conditional PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab316180 Zm00039ab316180_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab316180 Zm00039ab316180_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab316180 Zm00039ab316180_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab316180 Zm00039ab316180_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316280 Zm00039ab316280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316280 Zm00039ab316280_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316280 Zm00039ab316280_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316280 Zm00039ab316280_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab316280 Zm00039ab316280_P005 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab316310 Zm00039ab316310_P001 NA PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab316560 Zm00039ab316560_P001 viridiplantae PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis RXN-14385 EC-2.8.1.7 Zm00039ab316560 Zm00039ab316560_P001 expected PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab316600 Zm00039ab316600_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab316600 Zm00039ab316600_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab316600 Zm00039ab316600_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab316600 Zm00039ab316600_P004 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7798 EC-1.14.19.29 Zm00039ab316600 Zm00039ab316600_P005 viridiplantae PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab316700 Zm00039ab316700_P001 conditional PWY-5925 hydroxylated mugineic acid phytosiderophore biosynthesis 1.14.11.24-RXN EC-1.14.11.24 Zm00039ab316700 Zm00039ab316700_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab317040 Zm00039ab317040_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab317040 Zm00039ab317040_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab317040 Zm00039ab317040_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P001 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P001 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P002 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P002 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P003 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P003 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P003 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P004 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P004 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P004 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P005 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P005 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P005 conditional PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P006 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P006 NA PWY-6406 salicylate biosynthesis I ISOCHORSYN-RXN EC-5.4.4.2 Zm00039ab317130 Zm00039ab317130_P006 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00039ab317370 Zm00039ab317370_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) NITRIC-OXIDE-SYNTHASE-RXN EC-1.14.13.39 Zm00039ab317370 Zm00039ab317370_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab317390 Zm00039ab317390_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab317390 Zm00039ab317390_P001 conditional TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab317520 Zm00039ab317520_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab317520 Zm00039ab317520_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab317520 Zm00039ab317520_P003 expected GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab317760 Zm00039ab317760_P002 conditional PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab317960 Zm00039ab317960_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab317960 Zm00039ab317960_P001 expected PWY-3941 β-alanine biosynthesis II PROPIONATE--COA-LIGASE-RXN EC-6.2.1.17 Zm00039ab317960 Zm00039ab317960_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab317980 Zm00039ab317980_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab317980 Zm00039ab317980_P001 conditional PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab318170 Zm00039ab318170_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab318170 Zm00039ab318170_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab318170 Zm00039ab318170_P003 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab318290 Zm00039ab318290_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab318420 Zm00039ab318420_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab318420 Zm00039ab318420_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab318420 Zm00039ab318420_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab318420 Zm00039ab318420_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab318420 Zm00039ab318420_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab318420 Zm00039ab318420_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab318420 Zm00039ab318420_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab318420 Zm00039ab318420_P004 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab318420 Zm00039ab318420_P005 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab318420 Zm00039ab318420_P005 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318440 Zm00039ab318440_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318450 Zm00039ab318450_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318450 Zm00039ab318450_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318470 Zm00039ab318470_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318470 Zm00039ab318470_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab318470 Zm00039ab318470_P003 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab318630 Zm00039ab318630_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab318630 Zm00039ab318630_P002 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab318780 Zm00039ab318780_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab318780 Zm00039ab318780_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab318890 Zm00039ab318890_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab319020 Zm00039ab319020_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab319380 Zm00039ab319380_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab319380 Zm00039ab319380_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab319380 Zm00039ab319380_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab319740 Zm00039ab319740_P001 viridiplantae PWY-401 galactolipid biosynthesis I 2.4.1.46-RXN EC-2.4.1.46 Zm00039ab319790 Zm00039ab319790_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab319890 Zm00039ab319890_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab319890 Zm00039ab319890_P001 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab319910 Zm00039ab319910_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab319910 Zm00039ab319910_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab319920 Zm00039ab319920_P003 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab320040 Zm00039ab320040_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab320040 Zm00039ab320040_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab320040 Zm00039ab320040_P003 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab320040 Zm00039ab320040_P004 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab320340 Zm00039ab320340_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P003 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P003 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab320400 Zm00039ab320400_P003 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab320460 Zm00039ab320460_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab320460 Zm00039ab320460_P001 conditional PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15065 EC-3.1.1.4 Zm00039ab320460 Zm00039ab320460_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab320460 Zm00039ab320460_P001 ubiquitous PWY-7417 phospholipid remodeling (phosphatidate, yeast) RXN-15068 EC-3.1.1.4 Zm00039ab320460 Zm00039ab320460_P001 expected PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A2-RXN EC-3.1.1.4 Zm00039ab320460 Zm00039ab320460_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P002 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P003 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P003 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P004 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P004 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P005 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P005 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P006 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab320560 Zm00039ab320560_P006 ubiquitous PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P001 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P002 NA PWY-5690 TCA cycle II (plants and fungi) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) FUMHYDR-RXN EC-4.2.1.2 Zm00039ab320780 Zm00039ab320780_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab320850 Zm00039ab320850_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab320850 Zm00039ab320850_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab320850 Zm00039ab320850_P001 NA PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab320980 Zm00039ab320980_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab321030 Zm00039ab321030_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab321060 Zm00039ab321060_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab321060 Zm00039ab321060_P001 conditional PWY-3841 folate transformations II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00039ab321220 Zm00039ab321220_P001 viridiplantae PWY-2161 folate polyglutamylation FORMATETHFLIG-RXN EC-6.3.4.3 Zm00039ab321220 Zm00039ab321220_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II FORMATETHFLIG-RXN EC-6.3.4.3 Zm00039ab321220 Zm00039ab321220_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate FORMATETHFLIG-RXN EC-6.3.4.3 Zm00039ab321220 Zm00039ab321220_P001 excluded ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab321360 Zm00039ab321360_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab321470 Zm00039ab321470_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab321470 Zm00039ab321470_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321560 Zm00039ab321560_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321560 Zm00039ab321560_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321560 Zm00039ab321560_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321810 Zm00039ab321810_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321810 Zm00039ab321810_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321810 Zm00039ab321810_P001 conditional PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab321820 Zm00039ab321820_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab321820 Zm00039ab321820_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab321820 Zm00039ab321820_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321850 Zm00039ab321850_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321870 Zm00039ab321870_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321870 Zm00039ab321870_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321870 Zm00039ab321870_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321890 Zm00039ab321890_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321900 Zm00039ab321900_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321900 Zm00039ab321900_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321900 Zm00039ab321900_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab321920 Zm00039ab321920_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab321920 Zm00039ab321920_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab321920 Zm00039ab321920_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P005 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P006 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P006 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab322080 Zm00039ab322080_P006 expected PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab322110 Zm00039ab322110_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab322110 Zm00039ab322110_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab322110 Zm00039ab322110_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab322110 Zm00039ab322110_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab322110 Zm00039ab322110_P001 NA PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P001 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P002 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P003 conditional PWY-5659 GDP-mannose biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae PWY-622 starch biosynthesis PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 viridiplantae PWY-7238 sucrose biosynthesis II PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 conditional PWY66-399 gluconeogenesis III PGLUCISOM-RXN EC-5.3.1.9 Zm00039ab322150 Zm00039ab322150_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab322220 Zm00039ab322220_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab322220 Zm00039ab322220_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab322220 Zm00039ab322220_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab322400 Zm00039ab322400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322400 Zm00039ab322400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322400 Zm00039ab322400_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab322410 Zm00039ab322410_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322410 Zm00039ab322410_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322410 Zm00039ab322410_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab322420 Zm00039ab322420_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab322420 Zm00039ab322420_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab322420 Zm00039ab322420_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab322420 Zm00039ab322420_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab322470 Zm00039ab322470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322470 Zm00039ab322470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab322470 Zm00039ab322470_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab322600 Zm00039ab322600_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab322650 Zm00039ab322650_P003 expected PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab322910 Zm00039ab322910_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab322910 Zm00039ab322910_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab323040 Zm00039ab323040_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab323060 Zm00039ab323060_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab323060 Zm00039ab323060_P002 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab323100 Zm00039ab323100_P001 conditional HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00039ab323300 Zm00039ab323300_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis ATPPHOSPHORIBOSYLTRANS-RXN EC-2.4.2.17 Zm00039ab323300 Zm00039ab323300_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab323700 Zm00039ab323700_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab323700 Zm00039ab323700_P006 conditional PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab323750 Zm00039ab323750_P001 ubiquitous PWY-922 mevalonate pathway I 1.1.1.34-RXN EC-1.1.1.34 Zm00039ab323750 Zm00039ab323750_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab323780 Zm00039ab323780_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab323850 Zm00039ab323850_P001 viridiplantae PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324190 Zm00039ab324190_P001 conditional PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation 3.1.3.56-RXN EC-3.1.3.56 Zm00039ab324250 Zm00039ab324250_P001 expected PWY-6364 D-myo-inositol (1,3,4)-trisphosphate biosynthesis RXN-8730 EC-3.1.3.56 Zm00039ab324250 Zm00039ab324250_P001 excluded PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab324380 Zm00039ab324380_P001 viridiplantae GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab324470 Zm00039ab324470_P001 NA PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P004 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab324530 Zm00039ab324530_P005 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab324560 Zm00039ab324560_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab324670 Zm00039ab324670_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab324670 Zm00039ab324670_P001 conditional PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab324780 Zm00039ab324780_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab324780 Zm00039ab324780_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab324780 Zm00039ab324780_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab324780 Zm00039ab324780_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab324780 Zm00039ab324780_P001 excluded PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab324790 Zm00039ab324790_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab324820 Zm00039ab324820_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab324820 Zm00039ab324820_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab324820 Zm00039ab324820_P004 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab324820 Zm00039ab324820_P005 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab324820 Zm00039ab324820_P006 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab324990 Zm00039ab324990_P001 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab325000 Zm00039ab325000_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab325000 Zm00039ab325000_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab325090 Zm00039ab325090_P004 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab325100 Zm00039ab325100_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab325100 Zm00039ab325100_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P003 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P003 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P003 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P003 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P004 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P004 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P004 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab325100 Zm00039ab325100_P004 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab325100 Zm00039ab325100_P005 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab325100 Zm00039ab325100_P005 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab325180 Zm00039ab325180_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab325180 Zm00039ab325180_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab325180 Zm00039ab325180_P003 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325320 Zm00039ab325320_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325320 Zm00039ab325320_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325330 Zm00039ab325330_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325330 Zm00039ab325330_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325340 Zm00039ab325340_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab325340 Zm00039ab325340_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab325380 Zm00039ab325380_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab325380 Zm00039ab325380_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab325380 Zm00039ab325380_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab325380 Zm00039ab325380_P004 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab325380 Zm00039ab325380_P004 NA PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab325500 Zm00039ab325500_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab325500 Zm00039ab325500_P002 conditional PWY-5386 methylglyoxal degradation I GLYOXII-RXN EC-3.1.2.6 Zm00039ab325500 Zm00039ab325500_P003 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab325610 Zm00039ab325610_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab325610 Zm00039ab325610_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab325610 Zm00039ab325610_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab325620 Zm00039ab325620_P001 ubiquitous PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P001 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P001 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P001 expected PWY-3821 D-galactose detoxification UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P002 expected PWY-7344 UDP-α-D-galactose biosynthesis UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P002 expected PWY-6527 stachyose degradation UDPGLUCEPIM-RXN EC-5.1.3.2 Zm00039ab325940 Zm00039ab325940_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab326220 Zm00039ab326220_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab326220 Zm00039ab326220_P002 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab326310 Zm00039ab326310_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab326310 Zm00039ab326310_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab326310 Zm00039ab326310_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab326310 Zm00039ab326310_P004 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab326310 Zm00039ab326310_P005 viridiplantae GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab326430 Zm00039ab326430_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab326490 Zm00039ab326490_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab326490 Zm00039ab326490_P001 conditional PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00039ab326620 Zm00039ab326620_P001 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00039ab326620 Zm00039ab326620_P001 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00039ab326620 Zm00039ab326620_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00039ab326620 Zm00039ab326620_P001 NA PWY-3742 tetrahydrofolate biosynthesis II H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00039ab326620 Zm00039ab326620_P002 NA PWY-6614 tetrahydrofolate biosynthesis H2PTEROATESYNTH-RXN EC-2.5.1.15 Zm00039ab326620 Zm00039ab326620_P002 excluded PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00039ab326620 Zm00039ab326620_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2PTERIDINEPYROPHOSPHOKIN-RXN EC-2.7.6.3 Zm00039ab326620 Zm00039ab326620_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab326700 Zm00039ab326700_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab326700 Zm00039ab326700_P002 NA PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00039ab326780 Zm00039ab326780_P001 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00039ab326780 Zm00039ab326780_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab326790 Zm00039ab326790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab326790 Zm00039ab326790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab326790 Zm00039ab326790_P001 conditional PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab326880 Zm00039ab326880_P001 NA PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab326910 Zm00039ab326910_P002 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab326910 Zm00039ab326910_P003 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab326910 Zm00039ab326910_P004 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab326930 Zm00039ab326930_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab326930 Zm00039ab326930_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab326940 Zm00039ab326940_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab326940 Zm00039ab326940_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab327310 Zm00039ab327310_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab327330 Zm00039ab327330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab327330 Zm00039ab327330_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab327330 Zm00039ab327330_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab327330 Zm00039ab327330_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab327330 Zm00039ab327330_P005 viridiplantae PYRIDNUCSYN-PWY NAD de novo biosynthesis I (from aspartate) QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab327480 Zm00039ab327480_P001 viridiplantae PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde QUINOPRIBOTRANS-RXN EC-2.4.2.19 Zm00039ab327480 Zm00039ab327480_P001 excluded PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab327890 Zm00039ab327890_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab327890 Zm00039ab327890_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab327890 Zm00039ab327890_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab327890 Zm00039ab327890_P002 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab327950 Zm00039ab327950_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab327970 Zm00039ab327970_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab328200 Zm00039ab328200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab328260 Zm00039ab328260_P001 viridiplantae PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00039ab328300 Zm00039ab328300_P001 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00039ab328300 Zm00039ab328300_P001 expected PWY-3982 uracil degradation I (reductive) BETA-UREIDOPROPIONASE-RXN EC-3.5.1.6 Zm00039ab328300 Zm00039ab328300_P002 viridiplantae PWY-6430 thymine degradation RXN-11210 EC-3.5.1.6 Zm00039ab328300 Zm00039ab328300_P002 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab328620 Zm00039ab328620_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab328700 Zm00039ab328700_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab328700 Zm00039ab328700_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab328700 Zm00039ab328700_P001 conditional GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P001 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P002 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P003 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P003 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P004 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P004 NA GLUCONEO-PWY gluconeogenesis I 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P005 viridiplantae PWYQT-4481 TCA cycle variation V (plant) 1.1.1.39-RXN EC-1.1.1.38 Zm00039ab328810 Zm00039ab328810_P005 NA PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00039ab328880 Zm00039ab328880_P001 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00039ab328880 Zm00039ab328880_P001 viridiplantae PWY-5692 allantoin degradation to glyoxylate II URUR-RXN EC-3.5.3.26 Zm00039ab328880 Zm00039ab328880_P002 NA PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) URUR-RXN EC-3.5.3.26 Zm00039ab328880 Zm00039ab328880_P002 viridiplantae PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab329040 Zm00039ab329040_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab329040 Zm00039ab329040_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab329040 Zm00039ab329040_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab329040 Zm00039ab329040_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab329080 Zm00039ab329080_P002 NA SULFMETII-PWY assimilatory sulfate reduction II 1.8.4.9-RXN EC-1.8.4.9 Zm00039ab329270 Zm00039ab329270_P001 viridiplantae PWY-6932 selenate reduction RXN-12721 EC-1.8.4.9 Zm00039ab329270 Zm00039ab329270_P001 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab329370 Zm00039ab329370_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab329370 Zm00039ab329370_P001 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab329370 Zm00039ab329370_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab329370 Zm00039ab329370_P002 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab329370 Zm00039ab329370_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab329370 Zm00039ab329370_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab329370 Zm00039ab329370_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab329370 Zm00039ab329370_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P001 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P002 conditional ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 viridiplantae PWY-701 L-methionine degradation II RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 conditional PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 NA PWY-5826 hypoglycin biosynthesis RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 conditional PWY-702 L-methionine biosynthesis II (plants) RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 viridiplantae HOMOCYSDEGR-PWY L-cysteine biosynthesis III (from L-homocysteine) RXN-15123 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 expected PWY0-1535 D-serine degradation RXN-15127 EC-3.5.99.10 Zm00039ab329490 Zm00039ab329490_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab329630 Zm00039ab329630_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab329710 Zm00039ab329710_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab329710 Zm00039ab329710_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab329710 Zm00039ab329710_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab329710 Zm00039ab329710_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00039ab329910 Zm00039ab329910_P001 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00039ab329910 Zm00039ab329910_P002 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00039ab329910 Zm00039ab329910_P003 conditional GLYOXYLATE-BYPASS glyoxylate cycle ISOCIT-CLEAV-RXN EC-4.1.3.1 Zm00039ab329910 Zm00039ab329910_P004 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab329980 Zm00039ab329980_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab329980 Zm00039ab329980_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab329980 Zm00039ab329980_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab329980 Zm00039ab329980_P001 NA PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab330250 Zm00039ab330250_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab330250 Zm00039ab330250_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab330330 Zm00039ab330330_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab330330 Zm00039ab330330_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab330330 Zm00039ab330330_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab330330 Zm00039ab330330_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab330330 Zm00039ab330330_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab330370 Zm00039ab330370_P001 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab330560 Zm00039ab330560_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab330560 Zm00039ab330560_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab330560 Zm00039ab330560_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab330570 Zm00039ab330570_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab330590 Zm00039ab330590_P001 expected PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab331050 Zm00039ab331050_P003 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab331330 Zm00039ab331330_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab331330 Zm00039ab331330_P002 expected PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab331840 Zm00039ab331840_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab331840 Zm00039ab331840_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab331840 Zm00039ab331840_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab331840 Zm00039ab331840_P004 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab331970 Zm00039ab331970_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab331970 Zm00039ab331970_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab331970 Zm00039ab331970_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab331970 Zm00039ab331970_P002 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab332030 Zm00039ab332030_P001 expected PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab332150 Zm00039ab332150_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab332150 Zm00039ab332150_P001 NA PWY-5690 TCA cycle II (plants and fungi) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab332150 Zm00039ab332150_P002 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCCOASYN-RXN EC-6.2.1.5 Zm00039ab332150 Zm00039ab332150_P002 NA PWY-6859 all-trans-farnesol biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab332270 Zm00039ab332270_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab332270 Zm00039ab332270_P001 viridiplantae PWY-5122 geranyl diphosphate biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab332270 Zm00039ab332270_P001 viridiplantae PWY-7141 (3S)-linalool biosynthesis GPPSYN-RXN EC-2.5.1.1 Zm00039ab332270 Zm00039ab332270_P001 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab332270 Zm00039ab332270_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab332270 Zm00039ab332270_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab332270 Zm00039ab332270_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab332270 Zm00039ab332270_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P003 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P004 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P005 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P006 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab332520 Zm00039ab332520_P006 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab332600 Zm00039ab332600_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab332760 Zm00039ab332760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab332760 Zm00039ab332760_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab332760 Zm00039ab332760_P003 viridiplantae PWY-641 proanthocyanidins biosynthesis from flavanols RXN-10693 EC-1.3.1.77 Zm00039ab333400 Zm00039ab333400_P001 conditional PWY-6035 2,3-cis-flavanols biosynthesis RXN-9725 EC-1.3.1.77 Zm00039ab333400 Zm00039ab333400_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab333450 Zm00039ab333450_P001 conditional OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab333540 Zm00039ab333540_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I 6PGLUCONOLACT-RXN EC-3.1.1.31 Zm00039ab333540 Zm00039ab333540_P002 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab333690 Zm00039ab333690_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab333690 Zm00039ab333690_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab333690 Zm00039ab333690_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab333690 Zm00039ab333690_P001 NA PWY-6199 quercetin sulfate biosynthesis FLAVONOL-3-SULFOTRANSFERASE-RXN EC-2.8.2.25 Zm00039ab333700 Zm00039ab333700_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab333790 Zm00039ab333790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab333800 Zm00039ab333800_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab333800 Zm00039ab333800_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab333800 Zm00039ab333800_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab334000 Zm00039ab334000_P004 conditional PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab334160 Zm00039ab334160_P002 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P002 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P002 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab334240 Zm00039ab334240_P002 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab334260 Zm00039ab334260_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab334260 Zm00039ab334260_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab334260 Zm00039ab334260_P003 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab334260 Zm00039ab334260_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab334300 Zm00039ab334300_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab334310 Zm00039ab334310_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab334480 Zm00039ab334480_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I DAHPSYN-RXN EC-2.5.1.54 Zm00039ab334480 Zm00039ab334480_P002 viridiplantae LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab334490 Zm00039ab334490_P002 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334590 Zm00039ab334590_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334590 Zm00039ab334590_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334600 Zm00039ab334600_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334600 Zm00039ab334600_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334600 Zm00039ab334600_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab334600 Zm00039ab334600_P004 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab334760 Zm00039ab334760_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab334760 Zm00039ab334760_P001 conditional PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00039ab334820 Zm00039ab334820_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab334890 Zm00039ab334890_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P001 NA GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab334950 Zm00039ab334950_P002 NA PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab335200 Zm00039ab335200_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab335200 Zm00039ab335200_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab335200 Zm00039ab335200_P003 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab335200 Zm00039ab335200_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab335330 Zm00039ab335330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab335330 Zm00039ab335330_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335540 Zm00039ab335540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335540 Zm00039ab335540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335540 Zm00039ab335540_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335560 Zm00039ab335560_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335570 Zm00039ab335570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335570 Zm00039ab335570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335570 Zm00039ab335570_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335580 Zm00039ab335580_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335580 Zm00039ab335580_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335580 Zm00039ab335580_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335600 Zm00039ab335600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335600 Zm00039ab335600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335600 Zm00039ab335600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab335620 Zm00039ab335620_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335620 Zm00039ab335620_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab335620 Zm00039ab335620_P001 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab335680 Zm00039ab335680_P001 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab335830 Zm00039ab335830_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab335830 Zm00039ab335830_P002 conditional PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab335850 Zm00039ab335850_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab335850 Zm00039ab335850_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab335850 Zm00039ab335850_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab335850 Zm00039ab335850_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335900 Zm00039ab335900_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335900 Zm00039ab335900_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335900 Zm00039ab335900_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335910 Zm00039ab335910_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335910 Zm00039ab335910_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335910 Zm00039ab335910_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335950 Zm00039ab335950_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335950 Zm00039ab335950_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335950 Zm00039ab335950_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335980 Zm00039ab335980_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab335990 Zm00039ab335990_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab335990 Zm00039ab335990_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab335990 Zm00039ab335990_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab336160 Zm00039ab336160_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab336320 Zm00039ab336320_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab336320 Zm00039ab336320_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab336360 Zm00039ab336360_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab336360 Zm00039ab336360_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab336360 Zm00039ab336360_P001 conditional THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab336420 Zm00039ab336420_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab336420 Zm00039ab336420_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab336420 Zm00039ab336420_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab336420 Zm00039ab336420_P004 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab336420 Zm00039ab336420_P005 viridiplantae PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P001 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P001 NA PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P002 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P002 NA PWY-4341 L-glutamate biosynthesis V GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P003 conditional PWY-7061 glutamate-glutamine shuttle GLUTAMATE-SYNTHASE-FERREDOXIN-RXN EC-1.4.7.1 Zm00039ab336480 Zm00039ab336480_P003 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab336520 Zm00039ab336520_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab336540 Zm00039ab336540_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.7.8.15-RXN EC-2.7.8.15 Zm00039ab336650 Zm00039ab336650_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336700 Zm00039ab336700_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336700 Zm00039ab336700_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336700 Zm00039ab336700_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336700 Zm00039ab336700_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336710 Zm00039ab336710_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab336710 Zm00039ab336710_P001 expected PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P001 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P001 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P002 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P002 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P003 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P003 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P004 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P004 conditional PWY-6724 starch degradation II RXN-12391 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P005 conditional PWY-7238 sucrose biosynthesis II RXN-14354 EC-2.4.1.25 Zm00039ab336780 Zm00039ab336780_P005 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab336820 Zm00039ab336820_P006 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab336850 Zm00039ab336850_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab336850 Zm00039ab336850_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P002 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P003 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P004 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab336930 Zm00039ab336930_P004 conditional XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P001 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P002 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P004 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P005 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab336960 Zm00039ab336960_P006 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab337020 Zm00039ab337020_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab337140 Zm00039ab337140_P001 viridiplantae PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00039ab337250 Zm00039ab337250_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337290 Zm00039ab337290_P003 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337310 Zm00039ab337310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337310 Zm00039ab337310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337310 Zm00039ab337310_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337320 Zm00039ab337320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337320 Zm00039ab337320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337320 Zm00039ab337320_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab337330 Zm00039ab337330_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337330 Zm00039ab337330_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab337330 Zm00039ab337330_P001 conditional PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab337390 Zm00039ab337390_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P002 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab337510 Zm00039ab337510_P003 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337550 Zm00039ab337550_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337550 Zm00039ab337550_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337550 Zm00039ab337550_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337550 Zm00039ab337550_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337550 Zm00039ab337550_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337590 Zm00039ab337590_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337590 Zm00039ab337590_P002 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337590 Zm00039ab337590_P003 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337590 Zm00039ab337590_P004 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab337590 Zm00039ab337590_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab337600 Zm00039ab337600_P003 expected PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab337620 Zm00039ab337620_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab337620 Zm00039ab337620_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab337620 Zm00039ab337620_P003 conditional PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00039ab337900 Zm00039ab337900_P001 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00039ab337910 Zm00039ab337910_P001 expected PWY-3841 folate transformations II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab337970 Zm00039ab337970_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab337970 Zm00039ab337970_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATEREDUCT-RXN EC-1.5.1.3 Zm00039ab337970 Zm00039ab337970_P001 excluded PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab338080 Zm00039ab338080_P003 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab338100 Zm00039ab338100_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab338100 Zm00039ab338100_P001 ubiquitous PWY-6825 phosphatidylcholine biosynthesis V 2.1.1.17-RXN EC-2.1.1.17 Zm00039ab338250 Zm00039ab338250_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab338290 Zm00039ab338290_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab338290 Zm00039ab338290_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1641 EC-2.3.1.158 Zm00039ab338480 Zm00039ab338480_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-1641 EC-2.3.1.158 Zm00039ab338480 Zm00039ab338480_P001 conditional PWY-46 putrescine biosynthesis III ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab338520 Zm00039ab338520_P001 expected PWY-6305 putrescine biosynthesis IV ORNDECARBOX-RXN EC-4.1.1.17 Zm00039ab338520 Zm00039ab338520_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab338550 Zm00039ab338550_P002 ubiquitous PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00039ab338890 Zm00039ab338890_P001 viridiplantae PWY-6164 3-dehydroquinate biosynthesis I 3-DEHYDROQUINATE-SYNTHASE-RXN EC-4.2.3.4 Zm00039ab338890 Zm00039ab338890_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab339080 Zm00039ab339080_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab339080 Zm00039ab339080_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab339080 Zm00039ab339080_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab339130 Zm00039ab339130_P002 ubiquitous PWY-801 homocysteine and cysteine interconversion RXN-15130 EC-4.4.1.1 Zm00039ab339250 Zm00039ab339250_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab339340 Zm00039ab339340_P001 expected CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab339370 Zm00039ab339370_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab339370 Zm00039ab339370_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab339370 Zm00039ab339370_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) PROTOPORGENOXI-RXN EC-1.3.3.4 Zm00039ab339370 Zm00039ab339370_P002 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTCYCLOHYD-RXN EC-3.5.4.19 Zm00039ab339730 Zm00039ab339730_P001 viridiplantae HISTSYN-PWY L-histidine biosynthesis HISTPRATPHYD-RXN EC-3.6.1.31 Zm00039ab339730 Zm00039ab339730_P001 viridiplantae PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P002 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P003 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab339800 Zm00039ab339800_P003 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab339850 Zm00039ab339850_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab339850 Zm00039ab339850_P002 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab339910 Zm00039ab339910_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab339910 Zm00039ab339910_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab339910 Zm00039ab339910_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab339910 Zm00039ab339910_P002 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab340000 Zm00039ab340000_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab340000 Zm00039ab340000_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab340000 Zm00039ab340000_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab340000 Zm00039ab340000_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340010 Zm00039ab340010_P002 conditional LEU-DEG2-PWY L-leucine degradation I HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN EC-4.1.3.4 Zm00039ab340050 Zm00039ab340050_P001 viridiplantae ALACAT2-PWY L-alanine degradation II (to D-lactate) ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab340100 Zm00039ab340100_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13698 EC-2.6.1.2 Zm00039ab340100 Zm00039ab340100_P001 manual ALANINE-DEG3-PWY L-alanine degradation III ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab340100 Zm00039ab340100_P001 viridiplantae ALANINE-SYN2-PWY L-alanine biosynthesis II ALANINE-AMINOTRANSFERASE-RXN EC-2.6.1.2 Zm00039ab340100 Zm00039ab340100_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab340310 Zm00039ab340310_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab340310 Zm00039ab340310_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab340340 Zm00039ab340340_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340340 Zm00039ab340340_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340340 Zm00039ab340340_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab340350 Zm00039ab340350_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340350 Zm00039ab340350_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab340350 Zm00039ab340350_P001 conditional HISTSYN-PWY L-histidine biosynthesis HISTIDPHOS-RXN EC-3.1.3.15 Zm00039ab340390 Zm00039ab340390_P001 viridiplantae PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation RXN-10952 EC-3.1.3.25 Zm00039ab340390 Zm00039ab340390_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN EC-3.1.3.25 Zm00039ab340390 Zm00039ab340390_P001 viridiplantae PWY-4702 phytate degradation I RXN-7253 EC-3.1.3.25 Zm00039ab340390 Zm00039ab340390_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXNQT-4142 EC-3.1.3.93 Zm00039ab340390 Zm00039ab340390_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab340430 Zm00039ab340430_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab340460 Zm00039ab340460_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab340460 Zm00039ab340460_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab340460 Zm00039ab340460_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) FADSYN-RXN EC-2.7.7.2 Zm00039ab340460 Zm00039ab340460_P004 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab340590 Zm00039ab340590_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab340590 Zm00039ab340590_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab340600 Zm00039ab340600_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P005 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab340830 Zm00039ab340830_P006 expected PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab340920 Zm00039ab340920_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab340970 Zm00039ab340970_P001 ubiquitous PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab340970 Zm00039ab340970_P002 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab340990 Zm00039ab340990_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab340990 Zm00039ab340990_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab341250 Zm00039ab341250_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab341250 Zm00039ab341250_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab341250 Zm00039ab341250_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab341270 Zm00039ab341270_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab341270 Zm00039ab341270_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab341270 Zm00039ab341270_P001 conditional PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab341430 Zm00039ab341430_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab341430 Zm00039ab341430_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab341430 Zm00039ab341430_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab341430 Zm00039ab341430_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab341430 Zm00039ab341430_P005 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab341450 Zm00039ab341450_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab341450 Zm00039ab341450_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab341460 Zm00039ab341460_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab341460 Zm00039ab341460_P001 expected PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab341530 Zm00039ab341530_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab341810 Zm00039ab341810_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P004 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P005 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab341830 Zm00039ab341830_P005 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00039ab341910 Zm00039ab341910_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00039ab341910 Zm00039ab341910_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab342160 Zm00039ab342160_P001 viridiplantae MANNCAT-PWY D-mannose degradation MANNPISOM-RXN EC-5.3.1.8 Zm00039ab342160 Zm00039ab342160_P001 expected PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) MANNPISOM-RXN EC-5.3.1.8 Zm00039ab342160 Zm00039ab342160_P001 viridiplantae PWY-3881 mannitol biosynthesis MANNPISOM-RXN EC-5.3.1.8 Zm00039ab342160 Zm00039ab342160_P001 expected PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab342310 Zm00039ab342310_P001 viridiplantae PWY-6663 plant sterol biosynthesis II RXN-11887 EC-1.14.19.20 Zm00039ab342510 Zm00039ab342510_P001 NA PWY-2541 phytosterol biosynthesis (plants) RXN-4209 EC-1.14.19.20 Zm00039ab342510 Zm00039ab342510_P001 ubiquitous PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab342620 Zm00039ab342620_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab342620 Zm00039ab342620_P003 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab342700 Zm00039ab342700_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab342700 Zm00039ab342700_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab342840 Zm00039ab342840_P001 expected GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab342980 Zm00039ab342980_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13306 EC-1.3.1.93 Zm00039ab343010 Zm00039ab343010_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7711 EC-1.3.1.93 Zm00039ab343010 Zm00039ab343010_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16097 EC-1.3.1.93 Zm00039ab343010 Zm00039ab343010_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab343020 Zm00039ab343020_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab343050 Zm00039ab343050_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab343050 Zm00039ab343050_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab343050 Zm00039ab343050_P003 viridiplantae PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00039ab343090 Zm00039ab343090_P001 expected PWY-4041 γ-glutamyl cycle RXN-6601 EC-2.3.2.2 Zm00039ab343090 Zm00039ab343090_P001 viridiplantae PWY-5826 hypoglycin biosynthesis RXN-9157 EC-2.3.2.2 Zm00039ab343090 Zm00039ab343090_P001 conditional PWYQT-4432 glutathione degradation RXNQT-4143 EC-2.3.2.2 Zm00039ab343090 Zm00039ab343090_P001 NA PWY-8001 felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis RXN-19732 EC-3.4.19.13 Zm00039ab343090 Zm00039ab343090_P001 NA PWY-6842 glutathione-mediated detoxification II RXN-6641 EC-3.4.19.13 Zm00039ab343090 Zm00039ab343090_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXN-19574 EC-3.4.19.13 Zm00039ab343090 Zm00039ab343090_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab343120 Zm00039ab343120_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab343120 Zm00039ab343120_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab343120 Zm00039ab343120_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab343170 Zm00039ab343170_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab343170 Zm00039ab343170_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab343170 Zm00039ab343170_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab343180 Zm00039ab343180_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab343180 Zm00039ab343180_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab343180 Zm00039ab343180_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab343310 Zm00039ab343310_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab343310 Zm00039ab343310_P001 expected PWY-8027 parkeol biosynthesis RXN-12842 EC-5.4.99.47 Zm00039ab343480 Zm00039ab343480_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343490 Zm00039ab343490_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343490 Zm00039ab343490_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343490 Zm00039ab343490_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343500 Zm00039ab343500_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343500 Zm00039ab343500_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343500 Zm00039ab343500_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343510 Zm00039ab343510_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343510 Zm00039ab343510_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab343510 Zm00039ab343510_P001 NA CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab343520 Zm00039ab343520_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab343520 Zm00039ab343520_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab343520 Zm00039ab343520_P001 conditional PWY-4261 glycerol degradation I GLYCEROL-KIN-RXN EC-2.7.1.30 Zm00039ab343540 Zm00039ab343540_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab343590 Zm00039ab343590_P001 viridiplantae PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P001 conditional PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab343710 Zm00039ab343710_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab343870 Zm00039ab343870_P003 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab344010 Zm00039ab344010_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab344010 Zm00039ab344010_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab344010 Zm00039ab344010_P003 viridiplantae PWY-7985 oxalate degradation VI OXALYL-COA-DECARBOXYLASE-RXN EC-4.1.1.8 Zm00039ab344020 Zm00039ab344020_P001 NA PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P001 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P001 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab344050 Zm00039ab344050_P001 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P002 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P002 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P002 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab344050 Zm00039ab344050_P002 ubiquitous PWY-5886 4-hydroxyphenylpyruvate biosynthesis TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P003 viridiplantae PWY-581 indole-3-acetate biosynthesis II TRYPTOPHAN-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P003 conditional PWY-5048 rosmarinic acid biosynthesis I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P003 conditional PWY-5754 4-hydroxybenzoate biosynthesis I (eukaryotes) TYROSINE-AMINOTRANSFERASE-RXN EC-2.6.1.27 Zm00039ab344050 Zm00039ab344050_P003 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXN-10139 EC-2.6.1.99 Zm00039ab344050 Zm00039ab344050_P003 ubiquitous PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab344200 Zm00039ab344200_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab344200 Zm00039ab344200_P002 NA PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab344580 Zm00039ab344580_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab344670 Zm00039ab344670_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab344670 Zm00039ab344670_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab344670 Zm00039ab344670_P001 conditional PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00039ab344690 Zm00039ab344690_P001 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab344690 Zm00039ab344690_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab344690 Zm00039ab344690_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I CHOLINE-KINASE-RXN EC-2.7.1.32 Zm00039ab344690 Zm00039ab344690_P002 conditional PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab344690 Zm00039ab344690_P002 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab344690 Zm00039ab344690_P002 ubiquitous PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab344860 Zm00039ab344860_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab344960 Zm00039ab344960_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab344960 Zm00039ab344960_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab344960 Zm00039ab344960_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab344960 Zm00039ab344960_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab344960 Zm00039ab344960_P001 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab345060 Zm00039ab345060_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab345060 Zm00039ab345060_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab345060 Zm00039ab345060_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab345060 Zm00039ab345060_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab345060 Zm00039ab345060_P001 viridiplantae PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab345260 Zm00039ab345260_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab345260 Zm00039ab345260_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab345260 Zm00039ab345260_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab345260 Zm00039ab345260_P004 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab345360 Zm00039ab345360_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab345360 Zm00039ab345360_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab345360 Zm00039ab345360_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P003 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P003 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab345380 Zm00039ab345380_P003 conditional PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00039ab345420 Zm00039ab345420_P001 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00039ab345420 Zm00039ab345420_P002 expected PWY-6745 phytochelatins biosynthesis 2.3.2.15-RXN EC-2.3.2.15 Zm00039ab345420 Zm00039ab345420_P003 expected PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab345500 Zm00039ab345500_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345690 Zm00039ab345690_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345700 Zm00039ab345700_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345700 Zm00039ab345700_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345700 Zm00039ab345700_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345710 Zm00039ab345710_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345710 Zm00039ab345710_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345710 Zm00039ab345710_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345720 Zm00039ab345720_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345720 Zm00039ab345720_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345720 Zm00039ab345720_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab345730 Zm00039ab345730_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab345730 Zm00039ab345730_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab345780 Zm00039ab345780_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab345780 Zm00039ab345780_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab345780 Zm00039ab345780_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab345820 Zm00039ab345820_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab345820 Zm00039ab345820_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab345820 Zm00039ab345820_P003 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab346150 Zm00039ab346150_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00039ab346200 Zm00039ab346200_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN EC-2.1.2.11 Zm00039ab346200 Zm00039ab346200_P002 viridiplantae PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P001 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P002 conditional PWY-5049 rosmarinic acid biosynthesis II RXN-7632 EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 1.1.1.222-RXN EC-1.1.1.237 Zm00039ab346410 Zm00039ab346410_P003 conditional PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab346480 Zm00039ab346480_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab346480 Zm00039ab346480_P002 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab346600 Zm00039ab346600_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab346600 Zm00039ab346600_P001 conditional PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab346600 Zm00039ab346600_P002 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab346600 Zm00039ab346600_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab346620 Zm00039ab346620_P001 viridiplantae PWY-5859 eugenol and isoeugenol biosynthesis RXN-9245 EC-1.1.1.318 Zm00039ab346630 Zm00039ab346630_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab346730 Zm00039ab346730_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab346730 Zm00039ab346730_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab346940 Zm00039ab346940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab346950 Zm00039ab346950_P001 viridiplantae PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab347020 Zm00039ab347020_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab347020 Zm00039ab347020_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab347020 Zm00039ab347020_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab347020 Zm00039ab347020_P001 expected PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab347070 Zm00039ab347070_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab347070 Zm00039ab347070_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab347070 Zm00039ab347070_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab347190 Zm00039ab347190_P003 ubiquitous PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab347430 Zm00039ab347430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00039ab347430 Zm00039ab347430_P001 conditional PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab347660 Zm00039ab347660_P001 viridiplantae PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab347660 Zm00039ab347660_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab347740 Zm00039ab347740_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab347740 Zm00039ab347740_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab347740 Zm00039ab347740_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab347760 Zm00039ab347760_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab347760 Zm00039ab347760_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab347760 Zm00039ab347760_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P003 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P004 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P004 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P004 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P004 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab347780 Zm00039ab347780_P004 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab347930 Zm00039ab347930_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab347930 Zm00039ab347930_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab347930 Zm00039ab347930_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab347930 Zm00039ab347930_P003 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab348030 Zm00039ab348030_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation OHBUTYRYL-COA-EPIM-RXN EC-5.1.2.3 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7836 EC-5.3.3.8 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-5137 fatty acid β-oxidation III (unsaturated, odd number) ENOYL-COA-DELTA-ISOM-RXN EC-5.3.3.8 Zm00039ab348070 Zm00039ab348070_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12519 EC-5.3.3.8 Zm00039ab348070 Zm00039ab348070_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab348090 Zm00039ab348090_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00039ab348090 Zm00039ab348090_P001 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab348130 Zm00039ab348130_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab348200 Zm00039ab348200_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P003 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P004 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P004 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P004 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P005 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P005 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P005 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab348290 Zm00039ab348290_P005 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab348550 Zm00039ab348550_P001 expected COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) DEPHOSPHOCOAKIN-RXN EC-2.7.1.24 Zm00039ab348640 Zm00039ab348640_P003 NA LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab348650 Zm00039ab348650_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab348650 Zm00039ab348650_P001 conditional PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00039ab348680 Zm00039ab348680_P001 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00039ab348680 Zm00039ab348680_P001 conditional PWY-6897 thiamine salvage II THIAZOLSYN3-RXN EC-2.7.1.50 Zm00039ab348680 Zm00039ab348680_P002 NA PWY-7356 thiamine salvage IV (yeast) THIAZOLSYN3-RXN EC-2.7.1.50 Zm00039ab348680 Zm00039ab348680_P002 conditional PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab348910 Zm00039ab348910_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab349330 Zm00039ab349330_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab349330 Zm00039ab349330_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab349330 Zm00039ab349330_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab349430 Zm00039ab349430_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab349430 Zm00039ab349430_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab349430 Zm00039ab349430_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab349700 Zm00039ab349700_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II GLYRIBONUCSYN-RXN EC-6.3.4.13 Zm00039ab349700 Zm00039ab349700_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P005 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P005 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab349790 Zm00039ab349790_P005 conditional PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab349880 Zm00039ab349880_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P002 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab349880 Zm00039ab349880_P002 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab349880 Zm00039ab349880_P002 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab350140 Zm00039ab350140_P001 expected PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab350150 Zm00039ab350150_P001 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab350160 Zm00039ab350160_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P001 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P002 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P002 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P003 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P003 conditional PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P004 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab350440 Zm00039ab350440_P004 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab350780 Zm00039ab350780_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab350780 Zm00039ab350780_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab350780 Zm00039ab350780_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab350780 Zm00039ab350780_P004 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00039ab350910 Zm00039ab350910_P001 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00039ab350910 Zm00039ab350910_P001 expected PWY-5111 CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00039ab350910 Zm00039ab350910_P002 NA PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis CPM-KDOSYNTH-RXN EC-2.7.7.38 Zm00039ab350910 Zm00039ab350910_P002 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab351440 Zm00039ab351440_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab351440 Zm00039ab351440_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab351440 Zm00039ab351440_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab351640 Zm00039ab351640_P002 expected VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab351660 Zm00039ab351660_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab351660 Zm00039ab351660_P001 viridiplantae VALSYN-PWY L-valine biosynthesis ACETOLACTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab351660 Zm00039ab351660_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) ACETOOHBUTREDUCTOISOM-RXN EC-1.1.1.86 Zm00039ab351660 Zm00039ab351660_P002 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab351680 Zm00039ab351680_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab351680 Zm00039ab351680_P001 conditional GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab351700 Zm00039ab351700_P001 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab351850 Zm00039ab351850_P002 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P003 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab351850 Zm00039ab351850_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P005 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab351850 Zm00039ab351850_P005 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab351850 Zm00039ab351850_P006 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab351920 Zm00039ab351920_P001 viridiplantae PWY-6619 adenine and adenosine salvage VI ADENOSINE-KINASE-RXN EC-2.7.1.20 Zm00039ab352180 Zm00039ab352180_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab352350 Zm00039ab352350_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab352350 Zm00039ab352350_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab352350 Zm00039ab352350_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab352350 Zm00039ab352350_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab352350 Zm00039ab352350_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab352460 Zm00039ab352460_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab352460 Zm00039ab352460_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab352460 Zm00039ab352460_P003 viridiplantae PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab352580 Zm00039ab352580_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab352580 Zm00039ab352580_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab352580 Zm00039ab352580_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab352580 Zm00039ab352580_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab352580 Zm00039ab352580_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab352610 Zm00039ab352610_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab352610 Zm00039ab352610_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab352610 Zm00039ab352610_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab352610 Zm00039ab352610_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab352620 Zm00039ab352620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab352620 Zm00039ab352620_P002 viridiplantae PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab352910 Zm00039ab352910_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab352910 Zm00039ab352910_P002 excluded PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab352920 Zm00039ab352920_P001 ubiquitous PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P001 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P002 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P002 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1132 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P003 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN-7716 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA RXN-7719 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P003 viridiplantae GLYCLEAV-PWY glycine cleavage RXN-8629 EC-1.8.1.4 Zm00039ab352970 Zm00039ab352970_P003 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab353090 Zm00039ab353090_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab353090 Zm00039ab353090_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab353100 Zm00039ab353100_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab353100 Zm00039ab353100_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab353100 Zm00039ab353100_P004 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab353340 Zm00039ab353340_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab353340 Zm00039ab353340_P001 conditional GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab353450 Zm00039ab353450_P001 conditional PWY-922 mevalonate pathway I MEVALONATE-KINASE-RXN EC-2.7.1.36 Zm00039ab353490 Zm00039ab353490_P001 ubiquitous PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab353530 Zm00039ab353530_P003 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P001 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P002 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P002 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P002 ubiquitous PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P003 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P003 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab353600 Zm00039ab353600_P003 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab353710 Zm00039ab353710_P001 expected PWY-6019 pseudouridine degradation PSEUDOURIDINE-KINASE-RXN EC-2.7.1.83 Zm00039ab353900 Zm00039ab353900_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab353940 Zm00039ab353940_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab354150 Zm00039ab354150_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab354150 Zm00039ab354150_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab354200 Zm00039ab354200_P001 expected PWY-5136 fatty acid β-oxidation II (peroxisome) KETOACYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab354280 Zm00039ab354280_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I METHYLACETOACETYLCOATHIOL-RXN EC-2.3.1.16 Zm00039ab354280 Zm00039ab354280_P001 viridiplantae PWY-922 mevalonate pathway I ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab354280 Zm00039ab354280_P001 ubiquitous LYSINE-DEG2-PWY lysine degradation II ACETYL-COA-ACETYLTRANSFER-RXN EC-2.3.1.16 Zm00039ab354280 Zm00039ab354280_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10699 EC-2.3.1.16 Zm00039ab354280 Zm00039ab354280_P001 viridiplantae PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00039ab354430 Zm00039ab354430_P001 viridiplantae PWYQT-4427 sulfoquinovosyl diacylglycerol biosynthesis RXN-1223 EC-3.13.1.1 Zm00039ab354430 Zm00039ab354430_P002 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab354550 Zm00039ab354550_P003 expected XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab354930 Zm00039ab354930_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P003 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P003 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P003 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P003 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P003 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P004 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P004 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P004 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P004 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P004 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P004 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P004 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P004 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P004 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P005 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P005 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P005 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P005 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P005 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P005 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P005 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P005 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P005 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P006 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P006 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P006 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P006 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P006 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P006 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P006 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P006 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P006 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P007 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab355030 Zm00039ab355030_P007 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P007 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P007 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P007 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P007 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab355030 Zm00039ab355030_P007 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P007 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab355030 Zm00039ab355030_P007 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab355090 Zm00039ab355090_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab355090 Zm00039ab355090_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab355090 Zm00039ab355090_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab355100 Zm00039ab355100_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab355180 Zm00039ab355180_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab355180 Zm00039ab355180_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab355180 Zm00039ab355180_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab355180 Zm00039ab355180_P001 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P002 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P002 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P002 NA PWY-6040 chlorogenic acid biosynthesis II 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P003 conditional PWY-6039 chlorogenic acid biosynthesis I 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-2601 EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P003 conditional PWY-5868 simple coumarins biosynthesis 2.3.1.133-RXN EC-2.3.1.133 Zm00039ab355190 Zm00039ab355190_P003 NA PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355340 Zm00039ab355340_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355340 Zm00039ab355340_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355340 Zm00039ab355340_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355340 Zm00039ab355340_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355380 Zm00039ab355380_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355380 Zm00039ab355380_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355380 Zm00039ab355380_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355380 Zm00039ab355380_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355390 Zm00039ab355390_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355390 Zm00039ab355390_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355390 Zm00039ab355390_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355390 Zm00039ab355390_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355410 Zm00039ab355410_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355410 Zm00039ab355410_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355410 Zm00039ab355410_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355410 Zm00039ab355410_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355410 Zm00039ab355410_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355410 Zm00039ab355410_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355410 Zm00039ab355410_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355410 Zm00039ab355410_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355430 Zm00039ab355430_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355430 Zm00039ab355430_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355430 Zm00039ab355430_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355430 Zm00039ab355430_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab355590 Zm00039ab355590_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab355590 Zm00039ab355590_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab355590 Zm00039ab355590_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab355590 Zm00039ab355590_P001 expected PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab355680 Zm00039ab355680_P001 conditional PWY-82 UDP-β-L-arabinose biosynthesis II (from β-L-arabinose) L-ARABINOKINASE-RXN EC-2.7.1.46 Zm00039ab355690 Zm00039ab355690_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab355710 Zm00039ab355710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab355720 Zm00039ab355720_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P001 conditional GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab356040 Zm00039ab356040_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9557 EC-4.2.1.59 Zm00039ab356100 Zm00039ab356100_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P001 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P001 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P001 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P001 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN-13697 EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P002 manual ASPARTATESYN-PWY L-aspartate biosynthesis ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P002 viridiplantae ASPARTATE-DEG1-PWY L-aspartate degradation I ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P002 expected MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II ASPAMINOTRANS-RXN EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P002 expected PWY-5079 L-phenylalanine degradation III RXN-10814 EC-2.6.1.1 Zm00039ab356140 Zm00039ab356140_P002 NA PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab356190 Zm00039ab356190_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab356190 Zm00039ab356190_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DEOXYGUANOSINE-KINASE-RXN EC-2.7.1.74 Zm00039ab356240 Zm00039ab356240_P001 conditional PWY-7199 pyrimidine deoxyribonucleosides salvage DEOXYCYTIDINE-KINASE-RXN EC-2.7.1.74 Zm00039ab356240 Zm00039ab356240_P001 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab356440 Zm00039ab356440_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab356440 Zm00039ab356440_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab356440 Zm00039ab356440_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab356830 Zm00039ab356830_P001 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P001 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P001 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P001 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P002 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P002 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P002 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P002 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P003 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P003 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P003 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P003 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P004 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P004 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P004 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P004 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P005 viridiplantae PWY-6859 all-trans-farnesol biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P005 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P005 viridiplantae PWY-922 mevalonate pathway I IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P005 ubiquitous PWY-7560 methylerythritol phosphate pathway II IPPISOM-RXN EC-5.3.3.2 Zm00039ab357180 Zm00039ab357180_P005 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab357240 Zm00039ab357240_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab357240 Zm00039ab357240_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab357240 Zm00039ab357240_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab357380 Zm00039ab357380_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab357430 Zm00039ab357430_P002 conditional PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00039ab357470 Zm00039ab357470_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab357470 Zm00039ab357470_P001 ubiquitous PWY-6605 adenine and adenosine salvage II ADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.7 Zm00039ab357470 Zm00039ab357470_P002 viridiplantae PWY-6596 adenosine nucleotides degradation I INOSINE-NUCLEOSIDASE-RXN EC-3.2.2.2 Zm00039ab357470 Zm00039ab357470_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P001 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P001 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P002 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P002 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P003 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P003 conditional PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P004 manual PWY-6549 L-glutamine biosynthesis III PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN EC-2.7.9.1 Zm00039ab357510 Zm00039ab357510_P004 conditional PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab357550 Zm00039ab357550_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab357690 Zm00039ab357690_P001 expected ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab357710 Zm00039ab357710_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab357720 Zm00039ab357720_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab357740 Zm00039ab357740_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab357740 Zm00039ab357740_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab357740 Zm00039ab357740_P001 manual LIPASYN-PWY phospholipases PHOSPHOLIPASE-C-RXN EC-3.1.4.3 Zm00039ab357780 Zm00039ab357780_P001 ubiquitous PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab357860 Zm00039ab357860_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab357860 Zm00039ab357860_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab357860 Zm00039ab357860_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab357860 Zm00039ab357860_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab357870 Zm00039ab357870_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab357870 Zm00039ab357870_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab357870 Zm00039ab357870_P001 viridiplantae PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00039ab357880 Zm00039ab357880_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00039ab357880 Zm00039ab357880_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I AIRS-RXN EC-6.3.3.1 Zm00039ab357880 Zm00039ab357880_P002 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II AIRS-RXN EC-6.3.3.1 Zm00039ab357880 Zm00039ab357880_P002 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab358110 Zm00039ab358110_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab358110 Zm00039ab358110_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab358110 Zm00039ab358110_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P004 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P004 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358480 Zm00039ab358480_P004 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab358490 Zm00039ab358490_P003 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab358510 Zm00039ab358510_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab358510 Zm00039ab358510_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab358510 Zm00039ab358510_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab358600 Zm00039ab358600_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab358600 Zm00039ab358600_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab359010 Zm00039ab359010_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab359010 Zm00039ab359010_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab359010 Zm00039ab359010_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab359010 Zm00039ab359010_P003 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab359050 Zm00039ab359050_P002 NA SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab359080 Zm00039ab359080_P005 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab359180 Zm00039ab359180_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) GTP-CYCLOHYDRO-II-RXN EC-3.5.4.25 Zm00039ab359180 Zm00039ab359180_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13302 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-11750 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16096 EC-4.2.1.134 Zm00039ab359190 Zm00039ab359190_P003 conditional PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab359440 Zm00039ab359440_P001 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab359450 Zm00039ab359450_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab359450 Zm00039ab359450_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab359450 Zm00039ab359450_P001 conditional PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P001 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P001 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P002 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P002 expected PWY-5486 pyruvate fermentation to ethanol II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P003 viridiplantae PWY-6330 acetaldehyde biosynthesis II RXN-6161 EC-4.1.1.1 Zm00039ab359580 Zm00039ab359580_P003 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab360120 Zm00039ab360120_P001 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab360290 Zm00039ab360290_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab360290 Zm00039ab360290_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab360300 Zm00039ab360300_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab360300 Zm00039ab360300_P001 expected PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab360360 Zm00039ab360360_P001 expected GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P001 conditional GLUCONEO-PWY gluconeogenesis I PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 viridiplantae PWY66-399 gluconeogenesis III PHOSGLYPHOS-RXN EC-2.7.2.3 Zm00039ab360390 Zm00039ab360390_P002 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab360750 Zm00039ab360750_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab360750 Zm00039ab360750_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab361030 Zm00039ab361030_P001 viridiplantae PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00039ab361050 Zm00039ab361050_P001 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00039ab361050 Zm00039ab361050_P001 expected PWY-2161B-PMN folate polyglutamylation II RXN-3741 EC-3.4.19.9 Zm00039ab361050 Zm00039ab361050_P002 NA PWY-2161B glutamate removal from folates RXN-3741 EC-3.4.19.9 Zm00039ab361050 Zm00039ab361050_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab361160 Zm00039ab361160_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab361160 Zm00039ab361160_P002 expected PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361250 Zm00039ab361250_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361250 Zm00039ab361250_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361250 Zm00039ab361250_P003 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361310 Zm00039ab361310_P001 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab361450 Zm00039ab361450_P002 expected PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab361590 Zm00039ab361590_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab361590 Zm00039ab361590_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab361590 Zm00039ab361590_P001 NA PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361670 Zm00039ab361670_P001 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361670 Zm00039ab361670_P002 conditional PWY-6483 ceramide degradation RXN-11375 EC-3.5.1.23 Zm00039ab361670 Zm00039ab361670_P003 conditional PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab361700 Zm00039ab361700_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab361700 Zm00039ab361700_P002 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab361700 Zm00039ab361700_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab361820 Zm00039ab361820_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab361820 Zm00039ab361820_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab361880 Zm00039ab361880_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab362050 Zm00039ab362050_P001 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P001 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P001 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P001 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P001 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P001 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P001 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P001 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P002 expected PWY-3841 folate transformations II METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P002 viridiplantae PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHYLENETHFDEHYDROG-NADP-RXN EC-1.5.1.5 Zm00039ab362150 Zm00039ab362150_P002 excluded PWY-7909 formaldehyde oxidation VII (THF pathway) METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P002 expected PWY-3841 folate transformations II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P002 viridiplantae PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P002 expected PWY-3742 tetrahydrofolate biosynthesis II METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P002 NA PWY-1722 formate assimilation into 5,10-methylenetetrahydrofolate METHENYLTHFCYCLOHYDRO-RXN EC-3.5.4.9 Zm00039ab362150 Zm00039ab362150_P002 excluded CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab362180 Zm00039ab362180_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab362330 Zm00039ab362330_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab362360 Zm00039ab362360_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab362360 Zm00039ab362360_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab362360 Zm00039ab362360_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab362400 Zm00039ab362400_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab362400 Zm00039ab362400_P002 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab362480 Zm00039ab362480_P001 expected SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab362550 Zm00039ab362550_P002 ubiquitous PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab362600 Zm00039ab362600_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362600 Zm00039ab362600_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362600 Zm00039ab362600_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab362610 Zm00039ab362610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362610 Zm00039ab362610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362610 Zm00039ab362610_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab362620 Zm00039ab362620_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362620 Zm00039ab362620_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab362620 Zm00039ab362620_P001 conditional GLUTATHIONESYN-PWY glutathione biosynthesis GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab362770 Zm00039ab362770_P001 viridiplantae PWYQT-4470 γ-glutamyl cycle (plant pathway) GLUTCYSLIG-RXN EC-6.3.2.2 Zm00039ab362770 Zm00039ab362770_P001 NA PWY-8043 ophthalmate biosynthesis RXN-20400 EC-6.3.2.2 Zm00039ab362770 Zm00039ab362770_P001 NA LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab362920 Zm00039ab362920_P001 viridiplantae LEU-DEG2-PWY L-leucine degradation I RXN0-2301 EC-1.3.8.4 Zm00039ab362920 Zm00039ab362920_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab363010 Zm00039ab363010_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab363010 Zm00039ab363010_P002 expected PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab363370 Zm00039ab363370_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab363380 Zm00039ab363380_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P001 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab363380 Zm00039ab363380_P002 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab363380 Zm00039ab363380_P002 conditional LIPAS-PWY triacylglycerol degradation RXN-7952 EC-3.1.1.23 Zm00039ab363510 Zm00039ab363510_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab363510 Zm00039ab363510_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab363510 Zm00039ab363510_P001 conditional PWY-6605 adenine and adenosine salvage II ADENPRIBOSYLTRAN-RXN EC-2.4.2.7 Zm00039ab363690 Zm00039ab363690_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab363970 Zm00039ab363970_P001 viridiplantae PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P001 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P001 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P001 expected PWY-5441 S-methyl-L-methionine cycle METHIONINE-S-METHYLTRANSFERASE-RXN EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P002 ubiquitous PWY-6935 seleno-amino acid detoxification and volatilization II RXN-11062 EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P002 NA PWY-6931 seleno-amino acid detoxification and volatilization I RXN-11062 EC-2.1.1.12 Zm00039ab363980 Zm00039ab363980_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab364460 Zm00039ab364460_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab364460 Zm00039ab364460_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab364460 Zm00039ab364460_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab364740 Zm00039ab364740_P001 viridiplantae PWY-5686 UMP biosynthesis I CARBPSYN-RXN EC-6.3.5.5 Zm00039ab364840 Zm00039ab364840_P001 viridiplantae ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab364840 Zm00039ab364840_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) CARBPSYN-RXN EC-6.3.5.5 Zm00039ab364840 Zm00039ab364840_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle CARBPSYN-RXN EC-6.3.5.5 Zm00039ab364840 Zm00039ab364840_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab364920 Zm00039ab364920_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab364920 Zm00039ab364920_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab364920 Zm00039ab364920_P003 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab364920 Zm00039ab364920_P004 ubiquitous PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00039ab364940 Zm00039ab364940_P001 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00039ab364940 Zm00039ab364940_P001 conditional PWY-5946 δ-carotene biosynthesis RXN1F-147 EC-5.5.1.18 Zm00039ab364940 Zm00039ab364940_P002 viridiplantae PWY-5175 lactucaxanthin biosynthesis RXN-8028 EC-5.5.1.18 Zm00039ab364940 Zm00039ab364940_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab365060 Zm00039ab365060_P001 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab365060 Zm00039ab365060_P002 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab365060 Zm00039ab365060_P003 conditional PWY-842 starch degradation I RXN-15910 EC-3.2.1.20 Zm00039ab365060 Zm00039ab365060_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365220 Zm00039ab365220_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365230 Zm00039ab365230_P001 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P001 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P002 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab365580 Zm00039ab365580_P003 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab365580 Zm00039ab365580_P003 viridiplantae PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P004 viridiplantae PWY-7356 thiamine salvage IV (yeast) RXNQT-4191 EC-3.1.3.100 Zm00039ab365580 Zm00039ab365580_P004 conditional PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab365680 Zm00039ab365680_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365760 Zm00039ab365760_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365760 Zm00039ab365760_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab365830 Zm00039ab365830_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab365830 Zm00039ab365830_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365830 Zm00039ab365830_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365830 Zm00039ab365830_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365830 Zm00039ab365830_P001 NA PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab365840 Zm00039ab365840_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365950 Zm00039ab365950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab365950 Zm00039ab365950_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab365970 Zm00039ab365970_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab365970 Zm00039ab365970_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365970 Zm00039ab365970_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365970 Zm00039ab365970_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab365970 Zm00039ab365970_P001 NA PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab365980 Zm00039ab365980_P001 conditional PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab365980 Zm00039ab365980_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab366060 Zm00039ab366060_P001 viridiplantae PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab366160 Zm00039ab366160_P002 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab366190 Zm00039ab366190_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab366190 Zm00039ab366190_P002 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab366190 Zm00039ab366190_P003 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab366190 Zm00039ab366190_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P006 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P007 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P007 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P008 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366340 Zm00039ab366340_P008 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366350 Zm00039ab366350_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366350 Zm00039ab366350_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366400 Zm00039ab366400_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366400 Zm00039ab366400_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366410 Zm00039ab366410_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366410 Zm00039ab366410_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P003 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P004 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P005 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P005 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P006 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P006 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P007 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366450 Zm00039ab366450_P007 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366460 Zm00039ab366460_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366460 Zm00039ab366460_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366460 Zm00039ab366460_P002 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) UROGENDECARBOX-RXN EC-4.1.1.37 Zm00039ab366460 Zm00039ab366460_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab366860 Zm00039ab366860_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab366860 Zm00039ab366860_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab366860 Zm00039ab366860_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab366860 Zm00039ab366860_P001 NA PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab366930 Zm00039ab366930_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab366930 Zm00039ab366930_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab367010 Zm00039ab367010_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab367010 Zm00039ab367010_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab367010 Zm00039ab367010_P003 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab367010 Zm00039ab367010_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab367020 Zm00039ab367020_P001 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab367080 Zm00039ab367080_P001 expected PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab367250 Zm00039ab367250_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab367260 Zm00039ab367260_P001 viridiplantae LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab367270 Zm00039ab367270_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab367270 Zm00039ab367270_P001 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab367270 Zm00039ab367270_P002 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab367270 Zm00039ab367270_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P001 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P001 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P001 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P002 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P002 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P002 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P003 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P003 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P003 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P004 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P004 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P004 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P004 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P005 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P005 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P005 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P005 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P006 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P006 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P006 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P006 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P007 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P007 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P007 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P007 expected PWY-7176 UTP and CTP de novo biosynthesis CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P008 viridiplantae PWY-7185 UTP and CTP dephosphorylation I CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P008 expected PWY-5687 pyrimidine ribonucleotides interconversion CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P008 NA PWY-7177 UTP and CTP dephosphorylation II CTPSYN-RXN EC-6.3.4.2 Zm00039ab367340 Zm00039ab367340_P008 expected PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab367350 Zm00039ab367350_P001 conditional PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab367350 Zm00039ab367350_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab367380 Zm00039ab367380_P001 NA PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab367510 Zm00039ab367510_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab367630 Zm00039ab367630_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab367630 Zm00039ab367630_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab367640 Zm00039ab367640_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab367640 Zm00039ab367640_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab368000 Zm00039ab368000_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab368000 Zm00039ab368000_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab368000 Zm00039ab368000_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab368520 Zm00039ab368520_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P001 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P002 viridiplantae GLUGLNSYN-PWY L-glutamate biosynthesis IV GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMATE-SYNTHASE-NADH-RXN EC-1.4.1.14 Zm00039ab368550 Zm00039ab368550_P003 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4307 EC-2.5.1.27 Zm00039ab368640 Zm00039ab368640_P001 viridiplantae PWY-2681 trans-zeatin biosynthesis RXN-4303 EC-2.5.1.112 Zm00039ab368640 Zm00039ab368640_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab368770 Zm00039ab368770_P001 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab368800 Zm00039ab368800_P001 conditional TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab368880 Zm00039ab368880_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis PHOSPHATIDATE-PHOSPHATASE-RXN EC-3.1.3.4 Zm00039ab368880 Zm00039ab368880_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab368920 Zm00039ab368920_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab368920 Zm00039ab368920_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab368920 Zm00039ab368920_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab368920 Zm00039ab368920_P001 ubiquitous PWY-6859 all-trans-farnesol biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab369140 Zm00039ab369140_P001 conditional PWY-5123 trans, trans-farnesyl diphosphate biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab369140 Zm00039ab369140_P001 viridiplantae PWYQT-4449 polyisoprenoid biosynthesis FPPSYN-RXN EC-2.5.1.10 Zm00039ab369140 Zm00039ab369140_P001 NA PWY-5120 geranylgeranyl diphosphate biosynthesis FARNESYLTRANSTRANSFERASE-RXN EC-2.5.1.29 Zm00039ab369140 Zm00039ab369140_P001 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab369270 Zm00039ab369270_P001 expected PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-18481 EC-3.5.1.127 Zm00039ab369270 Zm00039ab369270_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P003 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P004 expected PWY-7185 UTP and CTP dephosphorylation I RXN-14025 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 expected PWY-6607 guanosine nucleotides degradation I RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN-7609 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 viridiplantae PWYQT-4445 pyrimidine salvage pathway RXNQT-4150 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 NA PWY-6596 adenosine nucleotides degradation I XMPXAN-RXN EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) RXN-5841 EC-3.1.3.5 Zm00039ab369360 Zm00039ab369360_P005 expected PWY-7199 pyrimidine deoxyribonucleosides salvage CYTIDEAM-RXN EC-3.5.4.5 Zm00039ab369440 Zm00039ab369440_P001 expected PWY-6556 pyrimidine ribonucleosides salvage II CYTIDEAM2-RXN EC-3.5.4.5 Zm00039ab369440 Zm00039ab369440_P001 viridiplantae PWY-7193 pyrimidine ribonucleosides salvage I CYTIDEAM2-RXN EC-3.5.4.5 Zm00039ab369440 Zm00039ab369440_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab369630 Zm00039ab369630_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab369630 Zm00039ab369630_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab369640 Zm00039ab369640_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) SERINE-O-ACETTRAN-RXN EC-2.3.1.30 Zm00039ab369640 Zm00039ab369640_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00039ab369690 Zm00039ab369690_P001 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00039ab369690 Zm00039ab369690_P002 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00039ab369690 Zm00039ab369690_P003 expected NAGLIPASYN-PWY lipid IVA biosynthesis UDPNACETYLGLUCOSAMACYLTRANS-RXN EC-2.3.1.129 Zm00039ab369690 Zm00039ab369690_P004 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab369930 Zm00039ab369930_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab369950 Zm00039ab369950_P001 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab370020 Zm00039ab370020_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab370020 Zm00039ab370020_P001 ubiquitous PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab370090 Zm00039ab370090_P004 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab370190 Zm00039ab370190_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab370190 Zm00039ab370190_P002 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab370190 Zm00039ab370190_P003 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab370300 Zm00039ab370300_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab370350 Zm00039ab370350_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab370350 Zm00039ab370350_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab370350 Zm00039ab370350_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab370420 Zm00039ab370420_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab370420 Zm00039ab370420_P002 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P001 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P002 NA PWY-7176 UTP and CTP de novo biosynthesis RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12002 EC-2.7.4.22 Zm00039ab370430 Zm00039ab370430_P003 NA PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERDECARB-RXN EC-4.1.1.65 Zm00039ab370610 Zm00039ab370610_P001 conditional PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERDECARB-RXN EC-4.1.1.65 Zm00039ab370620 Zm00039ab370620_P001 conditional PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab370710 Zm00039ab370710_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab370730 Zm00039ab370730_P001 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab370730 Zm00039ab370730_P002 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab370730 Zm00039ab370730_P003 viridiplantae PWY-5083 NAD/NADH phosphorylation and dephosphorylation NAD-KIN-RXN EC-2.7.1.23 Zm00039ab370730 Zm00039ab370730_P004 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab370980 Zm00039ab370980_P001 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab370980 Zm00039ab370980_P001 viridiplantae PWY-5686 UMP biosynthesis I OROPRIBTRANS-RXN EC-2.4.2.10 Zm00039ab370980 Zm00039ab370980_P002 viridiplantae PWY-5686 UMP biosynthesis I OROTPDECARB-RXN EC-4.1.1.23 Zm00039ab370980 Zm00039ab370980_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab371140 Zm00039ab371140_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab371140 Zm00039ab371140_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab371140 Zm00039ab371140_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab371140 Zm00039ab371140_P001 NA PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00039ab371170 Zm00039ab371170_P001 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00039ab371170 Zm00039ab371170_P002 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00039ab371170 Zm00039ab371170_P003 conditional PWY-7170 phytochromobilin biosynthesis 1.3.7.4-RXN EC-1.3.7.4 Zm00039ab371170 Zm00039ab371170_P004 conditional PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab371320 Zm00039ab371320_P001 expected PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00039ab371350 Zm00039ab371350_P001 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00039ab371350 Zm00039ab371350_P002 conditional PWY-1801 formaldehyde oxidation II (glutathione-dependent) S-FORMYLGLUTATHIONE-HYDROLASE-RXN EC-3.1.2.12 Zm00039ab371350 Zm00039ab371350_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab371430 Zm00039ab371430_P001 viridiplantae PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab371710 Zm00039ab371710_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab371820 Zm00039ab371820_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab371910 Zm00039ab371910_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab371910 Zm00039ab371910_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab371910 Zm00039ab371910_P003 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371930 Zm00039ab371930_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371930 Zm00039ab371930_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371930 Zm00039ab371930_P003 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371930 Zm00039ab371930_P004 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371960 Zm00039ab371960_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab371960 Zm00039ab371960_P003 expected PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab371970 Zm00039ab371970_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab371970 Zm00039ab371970_P001 viridiplantae PWY-5723 Rubisco shunt TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab371970 Zm00039ab371970_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) TRANSALDOL-RXN EC-2.2.1.2 Zm00039ab371970 Zm00039ab371970_P002 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab372100 Zm00039ab372100_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab372530 Zm00039ab372530_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab372530 Zm00039ab372530_P001 conditional PWY-6773 1,3-β-D-glucan biosynthesis 13-BETA-GLUCAN-SYNTHASE-RXN EC-2.4.1.34 Zm00039ab372590 Zm00039ab372590_P001 expected SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab372640 Zm00039ab372640_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab372640 Zm00039ab372640_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab372940 Zm00039ab372940_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab372950 Zm00039ab372950_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab372960 Zm00039ab372960_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab373050 Zm00039ab373050_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab373050 Zm00039ab373050_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab373200 Zm00039ab373200_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab373210 Zm00039ab373210_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab373210 Zm00039ab373210_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab373210 Zm00039ab373210_P003 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab373210 Zm00039ab373210_P004 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-7793 EC-2.4.1.80 Zm00039ab373210 Zm00039ab373210_P005 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab373390 Zm00039ab373390_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab373450 Zm00039ab373450_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab373510 Zm00039ab373510_P003 conditional LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab373570 Zm00039ab373570_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab373570 Zm00039ab373570_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab373650 Zm00039ab373650_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab373790 Zm00039ab373790_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab373790 Zm00039ab373790_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab373790 Zm00039ab373790_P001 conditional PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab373810 Zm00039ab373810_P001 expected PWY-6902 chitin degradation II (Vibrio) RXN-12625 EC-3.2.1.52 Zm00039ab373810 Zm00039ab373810_P002 expected PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab373920 Zm00039ab373920_P001 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P004 expected NONMEVIPP-PWY methylerythritol phosphate pathway I 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P005 viridiplantae PWY-7560 methylerythritol phosphate pathway II 2.7.7.60-RXN EC-2.7.7.60 Zm00039ab373960 Zm00039ab373960_P005 expected PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab374070 Zm00039ab374070_P001 conditional PWY-5035 gibberellin biosynthesis III (early C-13 hydroxylation) RXN1F-168 EC-1.14.11.12 Zm00039ab374070 Zm00039ab374070_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab374150 Zm00039ab374150_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab374150 Zm00039ab374150_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab374180 Zm00039ab374180_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab374200 Zm00039ab374200_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab374200 Zm00039ab374200_P003 NA PWY-181 photorespiration GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab374400 Zm00039ab374400_P001 ubiquitous GLYSYN2-PWY glycine biosynthesis GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab374400 Zm00039ab374400_P001 NA PWY-3841 folate transformations II GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab374400 Zm00039ab374400_P001 viridiplantae PWY-2161 folate polyglutamylation GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab374400 Zm00039ab374400_P001 viridiplantae GLYSYN-PWY glycine biosynthesis I GLYOHMETRANS-RXN EC-2.1.2.1 Zm00039ab374400 Zm00039ab374400_P001 excluded PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab374630 Zm00039ab374630_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab374630 Zm00039ab374630_P002 conditional PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00039ab374970 Zm00039ab374970_P001 expected PWY-5807 heptaprenyl diphosphate biosynthesis TRANS-HEXAPRENYLTRANSTRANSFERASE-RXN EC-2.5.1.30 Zm00039ab374970 Zm00039ab374970_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P001 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P001 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P001 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P001 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P001 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P001 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P002 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P002 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P002 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P002 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P002 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P002 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P002 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P002 viridiplantae PROSYN-PWY L-proline biosynthesis I GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P003 conditional PWY-3341 L-proline biosynthesis III GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTSEMIALDEHYDROG-RXN EC-1.2.1.41 Zm00039ab375620 Zm00039ab375620_P003 expected PROSYN-PWY L-proline biosynthesis I GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P003 conditional PWY-3341 L-proline biosynthesis III GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P003 ubiquitous PWY-6922 L-Nδ-acetylornithine biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P003 conditional CITRULBIO-PWY L-citrulline biosynthesis GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P003 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTKIN-RXN EC-2.7.2.11 Zm00039ab375620 Zm00039ab375620_P003 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P003 ubiquitous PROUT-PWY L-proline degradation RXN-14116 EC-1.2.1.88 Zm00039ab375620 Zm00039ab375620_P003 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab375670 Zm00039ab375670_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab375670 Zm00039ab375670_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab375670 Zm00039ab375670_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab375670 Zm00039ab375670_P002 viridiplantae PWY-3385 choline biosynthesis I 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab375700 Zm00039ab375700_P001 conditional PWY4FS-3 phosphatidylcholine biosynthesis III 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab375700 Zm00039ab375700_P001 ubiquitous PWY4FS-4 phosphatidylcholine biosynthesis IV 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab375700 Zm00039ab375700_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.1.1.103-RXN EC-2.1.1.103 Zm00039ab375700 Zm00039ab375700_P001 ubiquitous GLUCONEO-PWY gluconeogenesis I TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 viridiplantae PWY66-399 gluconeogenesis III TRIOSEPISOMERIZATION-RXN EC-5.3.1.1 Zm00039ab375750 Zm00039ab375750_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab375770 Zm00039ab375770_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab375770 Zm00039ab375770_P001 conditional PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab375970 Zm00039ab375970_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab375970 Zm00039ab375970_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab376010 Zm00039ab376010_P001 conditional PWY-6577 farnesylcysteine salvage pathway RXN-11625 EC-2.7.1.216 Zm00039ab376220 Zm00039ab376220_P001 expected PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab376380 Zm00039ab376380_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab376380 Zm00039ab376380_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab376380 Zm00039ab376380_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab376380 Zm00039ab376380_P002 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5467 EC-2.4.1.259 Zm00039ab376410 Zm00039ab376410_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5469 EC-2.4.1.261 Zm00039ab376410 Zm00039ab376410_P001 viridiplantae PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab376510 Zm00039ab376510_P001 ubiquitous PWY-5669 phosphatidylserine and phosphatidylethanolamine biosynthesis I PHOSPHASERSYN-RXN EC-2.7.8.8 Zm00039ab376510 Zm00039ab376510_P001 conditional PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00039ab376680 Zm00039ab376680_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00039ab376680 Zm00039ab376680_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab376710 Zm00039ab376710_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab376710 Zm00039ab376710_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab376710 Zm00039ab376710_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab376710 Zm00039ab376710_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab376710 Zm00039ab376710_P001 NA GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab376820 Zm00039ab376820_P004 viridiplantae PWY-6118 glycerol-3-phosphate shuttle 1.1.1.8-RXN EC-1.1.1.8 Zm00039ab377310 Zm00039ab377310_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab377370 Zm00039ab377370_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab377370 Zm00039ab377370_P002 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab377480 Zm00039ab377480_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab377480 Zm00039ab377480_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) OHACYL-COA-DEHYDROG-RXN EC-1.1.1.35 Zm00039ab377540 Zm00039ab377540_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10698 EC-1.1.1.35 Zm00039ab377540 Zm00039ab377540_P001 viridiplantae PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab377790 Zm00039ab377790_P001 expected PWY0-501 lipoate biosynthesis and incorporation I RXN0-949 EC-2.8.1.8 Zm00039ab378190 Zm00039ab378190_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab378210 Zm00039ab378210_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab378210 Zm00039ab378210_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab378210 Zm00039ab378210_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab378290 Zm00039ab378290_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab378340 Zm00039ab378340_P001 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P001 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P001 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P002 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P002 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P002 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P003 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P003 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P004 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P004 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P004 conditional PWY-3462 L-phenylalanine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P005 viridiplantae PWY-3461 L-tyrosine biosynthesis II CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P005 viridiplantae PWY-6120 L-tyrosine biosynthesis III CHORISMATEMUT-RXN EC-5.4.99.5 Zm00039ab378380 Zm00039ab378380_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab378390 Zm00039ab378390_P002 conditional PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab378420 Zm00039ab378420_P001 conditional PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab378460 Zm00039ab378460_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P001 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P002 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P003 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P003 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P003 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P004 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P004 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P004 NA PWY-5667 CDP-diacylglycerol biosynthesis I CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P005 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II CDPDIGLYSYN-RXN EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P005 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4389 EC-2.7.7.41 Zm00039ab378650 Zm00039ab378650_P005 NA PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P003 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P004 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab378660 Zm00039ab378660_P004 conditional RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab378690 Zm00039ab378690_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab378690 Zm00039ab378690_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab378690 Zm00039ab378690_P003 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVINKIN-RXN EC-2.7.1.26 Zm00039ab378690 Zm00039ab378690_P004 viridiplantae PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab378730 Zm00039ab378730_P001 conditional PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab378970 Zm00039ab378970_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab378990 Zm00039ab378990_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab378990 Zm00039ab378990_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab378990 Zm00039ab378990_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab378990 Zm00039ab378990_P001 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSE6PSYN-RXN EC-2.4.1.15 Zm00039ab379040 Zm00039ab379040_P001 expected GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P001 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P001 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P002 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P002 manual GLUCONEO-PWY gluconeogenesis I MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P003 viridiplantae PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type MALIC-NADP-RXN EC-1.1.1.40 Zm00039ab379160 Zm00039ab379160_P003 manual PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379520 Zm00039ab379520_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P001 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P002 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P003 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P004 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P005 ubiquitous PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab379540 Zm00039ab379540_P006 ubiquitous XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab379590 Zm00039ab379590_P001 expected PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab379650 Zm00039ab379650_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1134 EC-1.2.4.1 Zm00039ab379650 Zm00039ab379650_P002 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab379680 Zm00039ab379680_P001 expected PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab379700 Zm00039ab379700_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab379700 Zm00039ab379700_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab379870 Zm00039ab379870_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab380030 Zm00039ab380030_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab380030 Zm00039ab380030_P002 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab380090 Zm00039ab380090_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab380090 Zm00039ab380090_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab380090 Zm00039ab380090_P001 conditional PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab380130 Zm00039ab380130_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380190 Zm00039ab380190_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab380230 Zm00039ab380230_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab380230 Zm00039ab380230_P002 expected PWY-5129 sphingolipid biosynthesis (plants) RXN3O-1380 EC-1.14.18.5 Zm00039ab380250 Zm00039ab380250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380330 Zm00039ab380330_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380330 Zm00039ab380330_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380330 Zm00039ab380330_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380330 Zm00039ab380330_P004 viridiplantae TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab380420 Zm00039ab380420_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab380420 Zm00039ab380420_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab380420 Zm00039ab380420_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab380420 Zm00039ab380420_P004 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab380770 Zm00039ab380770_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab380780 Zm00039ab380780_P001 viridiplantae PWY-735 jasmonic acid biosynthesis 12-OXOPHYTODIENOATE-REDUCTASE-RXN EC-1.3.1.42 Zm00039ab380820 Zm00039ab380820_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab380840 Zm00039ab380840_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab380840 Zm00039ab380840_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab380840 Zm00039ab380840_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab380840 Zm00039ab380840_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab380840 Zm00039ab380840_P001 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab380860 Zm00039ab380860_P001 viridiplantae PWY-5027 phylloquinol biosynthesis RXN-17007 EC-1.6.5.12 Zm00039ab380900 Zm00039ab380900_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab380910 Zm00039ab380910_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab380910 Zm00039ab380910_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab380910 Zm00039ab380910_P001 conditional PWY-5284 shisonin biosynthesis RXN-8204 EC-2.3.1.215 Zm00039ab380990 Zm00039ab380990_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8204 EC-2.3.1.215 Zm00039ab380990 Zm00039ab380990_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P001 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P002 NA PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7699 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P003 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-14276 EC-4.2.1.119 Zm00039ab381050 Zm00039ab381050_P003 NA PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab381070 Zm00039ab381070_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab381070 Zm00039ab381070_P001 expected PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab381410 Zm00039ab381410_P001 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab381410 Zm00039ab381410_P002 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab381410 Zm00039ab381410_P003 viridiplantae PANTO-PWY phosphopantothenate biosynthesis I PANTOTHENATE-KIN-RXN EC-2.7.1.33 Zm00039ab381410 Zm00039ab381410_P004 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P001 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P001 NA PWY1F-FLAVSYN flavonoid biosynthesis APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P002 conditional PWY-6787 flavonoid biosynthesis (in equisetum) APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P002 conditional PWY-7897 flavonoid di-C-glucosylation APIGNAR-RXN EC-5.5.1.6 Zm00039ab381580 Zm00039ab381580_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P001 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P001 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P002 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P002 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P003 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P003 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P004 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P004 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P005 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P005 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P006 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P006 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P007 viridiplantae PWY-7851 coenzyme A biosynthesis II (eukaryotic) P-PANTOCYSDECARB-RXN EC-4.1.1.36 Zm00039ab381770 Zm00039ab381770_P007 NA PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab381850 Zm00039ab381850_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab381850 Zm00039ab381850_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9632 EC-2.3.1.41 Zm00039ab381850 Zm00039ab381850_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab381870 Zm00039ab381870_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab381870 Zm00039ab381870_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I 2.8.1.6-RXN EC-2.8.1.6 Zm00039ab381870 Zm00039ab381870_P003 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P002 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P004 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P005 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P006 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P007 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P008 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab381950 Zm00039ab381950_P009 expected PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00039ab381960 Zm00039ab381960_P001 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00039ab381960 Zm00039ab381960_P002 conditional PWY-5829 geraniol and geranial biosynthesis GERANIOL-DEHYDROGENASE-RXN EC-1.1.1.183 Zm00039ab381960 Zm00039ab381960_P003 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab382070 Zm00039ab382070_P002 conditional PWY-5125 anthocyanin biosynthesis 2.4.1.115-RXN EC-2.4.1.115 Zm00039ab382080 Zm00039ab382080_P001 conditional PWY-7267 anthocyanin biosynthesis (pelargonidin 3-O-glucoside) PELUDP-RXN EC-2.4.1.115 Zm00039ab382080 Zm00039ab382080_P001 conditional PWY-7450 anthocyanidin modification (Arabidopsis) RXN1F-775 EC-2.4.1.115 Zm00039ab382080 Zm00039ab382080_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN1F-775 EC-2.4.1.115 Zm00039ab382080 Zm00039ab382080_P001 NA PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab382250 Zm00039ab382250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab382380 Zm00039ab382380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab382390 Zm00039ab382390_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab382680 Zm00039ab382680_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab383060 Zm00039ab383060_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab383060 Zm00039ab383060_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab383060 Zm00039ab383060_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab383060 Zm00039ab383060_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab383060 Zm00039ab383060_P001 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab383070 Zm00039ab383070_P001 expected PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00039ab383290 Zm00039ab383290_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00039ab383290 Zm00039ab383290_P001 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00039ab383290 Zm00039ab383290_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00039ab383290 Zm00039ab383290_P002 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-11361 EC-2.7.7.80 Zm00039ab383290 Zm00039ab383290_P003 viridiplantae PWY-6823 molybdenum cofactor biosynthesis RXN-12473 EC-2.8.1.11 Zm00039ab383290 Zm00039ab383290_P003 viridiplantae PWY-7859 jasmonoyl-L-isoleucine inactivation RXN-12421 EC-1.14.14.48 Zm00039ab383320 Zm00039ab383320_P001 expected PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab383390 Zm00039ab383390_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab383390 Zm00039ab383390_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab383390 Zm00039ab383390_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab383390 Zm00039ab383390_P001 ubiquitous PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab383530 Zm00039ab383530_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab383530 Zm00039ab383530_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab383530 Zm00039ab383530_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab383530 Zm00039ab383530_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab383530 Zm00039ab383530_P001 NA PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab383770 Zm00039ab383770_P001 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab384020 Zm00039ab384020_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab384030 Zm00039ab384030_P002 NA PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab384130 Zm00039ab384130_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab384280 Zm00039ab384280_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab384390 Zm00039ab384390_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab384390 Zm00039ab384390_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab384390 Zm00039ab384390_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab384440 Zm00039ab384440_P005 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P002 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P003 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P003 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab384480 Zm00039ab384480_P003 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab384500 Zm00039ab384500_P002 conditional PWY-6887 kauralexin biosynthesis RXN-12593 EC-4.2.3.103 Zm00039ab384630 Zm00039ab384630_P001 conditional PWY-7481 oryzalide A biosynthesis RXN-12593 EC-4.2.3.103 Zm00039ab384630 Zm00039ab384630_P001 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9282 EC-2.1.1.114 Zm00039ab384660 Zm00039ab384660_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9281 EC-2.1.1.114 Zm00039ab384660 Zm00039ab384660_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9237 EC-2.1.1.64 Zm00039ab384660 Zm00039ab384660_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) 2.1.1.64-RXN EC-2.1.1.64 Zm00039ab384660 Zm00039ab384660_P001 expected PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab384700 Zm00039ab384700_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab384700 Zm00039ab384700_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab384700 Zm00039ab384700_P001 viridiplantae CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P004 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P005 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P005 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P006 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384710 Zm00039ab384710_P006 expected PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab384780 Zm00039ab384780_P001 conditional CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384820 Zm00039ab384820_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384830 Zm00039ab384830_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384830 Zm00039ab384830_P001 expected ASPSYNII-PWY cyanide detoxification I L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab384830 Zm00039ab384830_P001 conditional P401-PWY cyanide degradation L-3-CYANOALANINE-SYNTHASE-RXN EC-4.4.1.9 Zm00039ab384830 Zm00039ab384830_P001 ubiquitous CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384840 Zm00039ab384840_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384840 Zm00039ab384840_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P001 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P001 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P002 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P002 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P003 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P003 expected CYSTSYN-PWY L-cysteine biosynthesis I ACSERLY-RXN EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P004 viridiplantae PWY-6936 seleno-amino acid biosynthesis (plants) RXN-12726 EC-2.5.1.47 Zm00039ab384870 Zm00039ab384870_P004 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab384940 Zm00039ab384940_P001 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab385040 Zm00039ab385040_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab385040 Zm00039ab385040_P004 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab385040 Zm00039ab385040_P005 viridiplantae NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P002 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P003 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P003 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P004 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXS-RXN EC-2.2.1.7 Zm00039ab385180 Zm00039ab385180_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab385190 Zm00039ab385190_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab385190 Zm00039ab385190_P001 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab385220 Zm00039ab385220_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab385250 Zm00039ab385250_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab385250 Zm00039ab385250_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab385250 Zm00039ab385250_P003 viridiplantae PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab385300 Zm00039ab385300_P001 expected PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab385410 Zm00039ab385410_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab385410 Zm00039ab385410_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab385410 Zm00039ab385410_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab385410 Zm00039ab385410_P002 viridiplantae PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) GDPMANDEHYDRA-RXN EC-4.2.1.47 Zm00039ab385670 Zm00039ab385670_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P003 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab385780 Zm00039ab385780_P004 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate 2.5.1.19-RXN EC-2.5.1.19 Zm00039ab385910 Zm00039ab385910_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P001 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P002 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P003 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P004 viridiplantae PWY-5723 Rubisco shunt 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) 2TRANSKETO-RXN EC-2.2.1.1 Zm00039ab385920 Zm00039ab385920_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P004 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P005 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab385950 Zm00039ab385950_P005 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab386030 Zm00039ab386030_P001 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab386030 Zm00039ab386030_P002 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab386030 Zm00039ab386030_P003 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab386030 Zm00039ab386030_P004 viridiplantae PWY-622 starch biosynthesis RXN-14378 EC-2.4.1.242 Zm00039ab386030 Zm00039ab386030_P005 viridiplantae PWY-43 putrescine biosynthesis II ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab386100 Zm00039ab386100_P001 viridiplantae PWY-6305 putrescine biosynthesis IV ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab386100 Zm00039ab386100_P001 conditional PWY-40 putrescine biosynthesis I ARGDECARBOX-RXN EC-4.1.1.19 Zm00039ab386100 Zm00039ab386100_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab386210 Zm00039ab386210_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab386210 Zm00039ab386210_P001 NA PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab386360 Zm00039ab386360_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab386660 Zm00039ab386660_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab386660 Zm00039ab386660_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab386660 Zm00039ab386660_P003 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab386760 Zm00039ab386760_P001 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab386760 Zm00039ab386760_P002 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab386760 Zm00039ab386760_P003 viridiplantae PWY-3841 folate transformations II 5-FORMYL-THF-CYCLO-LIGASE-RXN EC-6.3.3.2 Zm00039ab386760 Zm00039ab386760_P004 viridiplantae DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab386890 Zm00039ab386890_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab386890 Zm00039ab386890_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab386890 Zm00039ab386890_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab386890 Zm00039ab386890_P002 expected LYSINE-DEG2-PWY lysine degradation II ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00039ab387030 Zm00039ab387030_P002 NA PWYQT-1 lysine degradation III ALLYSINE-DEHYDROG-RXN EC-1.2.1.31 Zm00039ab387030 Zm00039ab387030_P002 NA MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab387070 Zm00039ab387070_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab387070 Zm00039ab387070_P002 viridiplantae PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab387090 Zm00039ab387090_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab387090 Zm00039ab387090_P002 expected PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab387100 Zm00039ab387100_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab387100 Zm00039ab387100_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab387100 Zm00039ab387100_P003 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN EC-3.2.2.16 Zm00039ab387100 Zm00039ab387100_P004 ubiquitous SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab387240 Zm00039ab387240_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab387290 Zm00039ab387290_P001 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab387290 Zm00039ab387290_P002 viridiplantae PWY-101 photosynthesis light reactions 1.18.1.2-RXN EC-1.18.1.2 Zm00039ab387290 Zm00039ab387290_P003 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab387370 Zm00039ab387370_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab387370 Zm00039ab387370_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab387370 Zm00039ab387370_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P001 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P001 NA PWY-5136 fatty acid β-oxidation II (peroxisome) RXN-11026 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12518 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P002 conditional PWY-735 jasmonic acid biosynthesis RXN-10696 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P002 viridiplantae PWY-6920 6-gingerol analog biosynthesis (engineered) RXN-12669 EC-1.3.3.6 Zm00039ab387550 Zm00039ab387550_P002 NA TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00039ab387570 Zm00039ab387570_P001 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00039ab387570 Zm00039ab387570_P002 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00039ab387570 Zm00039ab387570_P003 conditional TYRFUMCAT-PWY L-tyrosine degradation I HOMOGENTISATE-12-DIOXYGENASE-RXN EC-1.13.11.5 Zm00039ab387570 Zm00039ab387570_P004 conditional PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis ADPREDUCT-RXN EC-1.17.4.1 Zm00039ab387870 Zm00039ab387870_P001 ubiquitous PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab387870 Zm00039ab387870_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I UDPREDUCT-RXN EC-1.17.4.1 Zm00039ab387870 Zm00039ab387870_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I GDPREDUCT-RXN EC-1.17.4.1 Zm00039ab387870 Zm00039ab387870_P001 ubiquitous PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab387950 Zm00039ab387950_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab387970 Zm00039ab387970_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab387970 Zm00039ab387970_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab387970 Zm00039ab387970_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) RXN-5470 EC-2.4.1.267 Zm00039ab388070 Zm00039ab388070_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab388110 Zm00039ab388110_P001 viridiplantae PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P001 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P001 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P001 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P002 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P002 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P002 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P003 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P003 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P003 conditional PWY66-21 ethanol degradation II RXN66-3 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P004 expected PWY-2501 fatty acid α-oxidation I RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P004 conditional PWY-2724 alkane oxidation RXN-4142 EC-1.2.1.3 Zm00039ab388270 Zm00039ab388270_P004 conditional PWY-1581 plastoquinol-9 biosynthesis I RXN-2761 EC-2.5.1.117 Zm00039ab388490 Zm00039ab388490_P001 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab388690 Zm00039ab388690_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab388690 Zm00039ab388690_P001 expected PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab388740 Zm00039ab388740_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.141-RXN EC-2.4.1.141 Zm00039ab388940 Zm00039ab388940_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab389070 Zm00039ab389070_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab389100 Zm00039ab389100_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab389100 Zm00039ab389100_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab389100 Zm00039ab389100_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab389120 Zm00039ab389120_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab389310 Zm00039ab389310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab389310 Zm00039ab389310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab389310 Zm00039ab389310_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab389320 Zm00039ab389320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab389320 Zm00039ab389320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab389320 Zm00039ab389320_P001 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab389860 Zm00039ab389860_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab389860 Zm00039ab389860_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab389900 Zm00039ab389900_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab389900 Zm00039ab389900_P002 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab389900 Zm00039ab389900_P003 viridiplantae PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab390170 Zm00039ab390170_P001 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab390170 Zm00039ab390170_P001 conditional PWY-7985 oxalate degradation VI 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab390170 Zm00039ab390170_P002 NA PWY-1881 formate oxidation to CO2 1.2.1.2-RXN EC-1.17.1.9 Zm00039ab390170 Zm00039ab390170_P002 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab390330 Zm00039ab390330_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab390330 Zm00039ab390330_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab390340 Zm00039ab390340_P001 NA PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab390510 Zm00039ab390510_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab390510 Zm00039ab390510_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab390520 Zm00039ab390520_P003 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab390660 Zm00039ab390660_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab390660 Zm00039ab390660_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab390660 Zm00039ab390660_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab390730 Zm00039ab390730_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab390730 Zm00039ab390730_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab390780 Zm00039ab390780_P001 expected BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab391030 Zm00039ab391030_P001 viridiplantae BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab391030 Zm00039ab391030_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab391030 Zm00039ab391030_P003 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab391030 Zm00039ab391030_P003 NA BSUBPOLYAMSYN-PWY spermidine biosynthesis I SPERMIDINESYN-RXN EC-2.5.1.16 Zm00039ab391030 Zm00039ab391030_P004 viridiplantae ARGSPECAT-PWY spermine biosynthesis SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab391040 Zm00039ab391040_P001 conditional POLYAMINSYN3-PWY superpathway of polyamine biosynthesis II SPERMINE-SYNTHASE-RXN EC-2.5.1.22 Zm00039ab391040 Zm00039ab391040_P001 NA PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P001 conditional PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P002 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P002 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab391240 Zm00039ab391240_P002 conditional PWY-3461 L-tyrosine biosynthesis II RXN-5682 EC-1.3.1.78 Zm00039ab391620 Zm00039ab391620_P001 viridiplantae PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P001 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P002 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P002 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P003 manual PWY-6549 L-glutamine biosynthesis III PEPCARBOX-RXN EC-4.1.1.31 Zm00039ab391640 Zm00039ab391640_P003 conditional NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab391650 Zm00039ab391650_P001 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab391650 Zm00039ab391650_P001 expected NONMEVIPP-PWY methylerythritol phosphate pathway I DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab391650 Zm00039ab391650_P002 viridiplantae PWY-7560 methylerythritol phosphate pathway II DXPREDISOM-RXN EC-1.1.1.267 Zm00039ab391650 Zm00039ab391650_P002 expected PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab391780 Zm00039ab391780_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391780 Zm00039ab391780_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391780 Zm00039ab391780_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab391810 Zm00039ab391810_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391810 Zm00039ab391810_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391810 Zm00039ab391810_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab391820 Zm00039ab391820_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab392040 Zm00039ab392040_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab392040 Zm00039ab392040_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab392040 Zm00039ab392040_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab392040 Zm00039ab392040_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab392040 Zm00039ab392040_P005 conditional PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00039ab392210 Zm00039ab392210_P001 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00039ab392210 Zm00039ab392210_P002 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00039ab392210 Zm00039ab392210_P003 expected PWY-4841 UDP-α-D-glucuronate biosynthesis (from myo-inositol) MYO-INOSITOL-OXYGENASE-RXN EC-1.13.99.1 Zm00039ab392210 Zm00039ab392210_P004 expected PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab392800 Zm00039ab392800_P001 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab392970 Zm00039ab392970_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab392970 Zm00039ab392970_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab392970 Zm00039ab392970_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab392970 Zm00039ab392970_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab393230 Zm00039ab393230_P004 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab393670 Zm00039ab393670_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P001 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P002 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P003 conditional PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab393720 Zm00039ab393720_P004 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P001 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P002 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P002 viridiplantae VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P003 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab393750 Zm00039ab393750_P003 viridiplantae PWY-5284 shisonin biosynthesis RXN-8169 EC-2.4.1.298 Zm00039ab393760 Zm00039ab393760_P001 conditional PWY-5313 superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) RXN-8169 EC-2.4.1.298 Zm00039ab393760 Zm00039ab393760_P001 NA PWY-5307 gentiodelphin biosynthesis RXN-8228 EC-2.4.1.298 Zm00039ab393760 Zm00039ab393760_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393850 Zm00039ab393850_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393860 Zm00039ab393860_P001 conditional PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab393870 Zm00039ab393870_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab393920 Zm00039ab393920_P001 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab393920 Zm00039ab393920_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab394090 Zm00039ab394090_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab394090 Zm00039ab394090_P002 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab394160 Zm00039ab394160_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I RXN-5781 EC-2.7.8.2 Zm00039ab394420 Zm00039ab394420_P001 conditional PWY-3561 choline biosynthesis III RXN-5781 EC-2.7.8.2 Zm00039ab394420 Zm00039ab394420_P001 ubiquitous PWY-6804 diacylglycerol biosynthesis (PUFA enrichment in oilseed) RXN-5781 EC-2.7.8.2 Zm00039ab394420 Zm00039ab394420_P001 expected PWY4FS-2 phosphatidylcholine biosynthesis II RXN-5781 EC-2.7.8.2 Zm00039ab394420 Zm00039ab394420_P001 ubiquitous PWY-7618 ricinoleate biosynthesis RXN-19426 EC-2.7.8.2 Zm00039ab394420 Zm00039ab394420_P001 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab394550 Zm00039ab394550_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00039ab394580 Zm00039ab394580_P001 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00039ab394580 Zm00039ab394580_P002 conditional PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14929 EC-2.5.1.116 Zm00039ab394580 Zm00039ab394580_P003 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab394800 Zm00039ab394800_P001 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab394860 Zm00039ab394860_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab394860 Zm00039ab394860_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab394860 Zm00039ab394860_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab394860 Zm00039ab394860_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab394860 Zm00039ab394860_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab394860 Zm00039ab394860_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab394860 Zm00039ab394860_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab394880 Zm00039ab394880_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab394880 Zm00039ab394880_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab394880 Zm00039ab394880_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab394880 Zm00039ab394880_P002 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab394960 Zm00039ab394960_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab394960 Zm00039ab394960_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab394960 Zm00039ab394960_P001 NA PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-6724 EC-2.3.1.196 Zm00039ab394980 Zm00039ab394980_P001 conditional PWY-4203 volatile benzenoid biosynthesis I (ester formation) RXN-6724 EC-2.3.1.196 Zm00039ab394980 Zm00039ab394980_P001 expected PWY-6443 benzoate biosynthesis I (CoA-dependent, β-oxidative) RXN-6724 EC-2.3.1.196 Zm00039ab394980 Zm00039ab394980_P001 NA PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab395140 Zm00039ab395140_P001 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab395140 Zm00039ab395140_P002 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab395140 Zm00039ab395140_P003 conditional PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab395140 Zm00039ab395140_P004 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P001 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P001 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P001 conditional PWY-6908 thiamine diphosphate biosynthesis IV (eukaryotes) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P002 viridiplantae PWY-6897 thiamine salvage II THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P002 NA PWY-7356 thiamine salvage IV (yeast) THI-P-SYN-RXN EC-2.5.1.3 Zm00039ab395150 Zm00039ab395150_P002 conditional PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab395340 Zm00039ab395340_P001 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab395340 Zm00039ab395340_P002 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab395340 Zm00039ab395340_P003 expected PWY-5381 pyridine nucleotide cycling (plants) NADPYROPHOSPHAT-RXN EC-3.6.1.22 Zm00039ab395340 Zm00039ab395340_P004 expected PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab395560 Zm00039ab395560_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab395560 Zm00039ab395560_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab395590 Zm00039ab395590_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab395700 Zm00039ab395700_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab395700 Zm00039ab395700_P002 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395750 Zm00039ab395750_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395750 Zm00039ab395750_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395760 Zm00039ab395760_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395760 Zm00039ab395760_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395790 Zm00039ab395790_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395790 Zm00039ab395790_P002 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395820 Zm00039ab395820_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab395820 Zm00039ab395820_P002 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab396050 Zm00039ab396050_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab396070 Zm00039ab396070_P001 viridiplantae PWY0-662 PRPP biosynthesis PRPPSYN-RXN EC-2.7.6.1 Zm00039ab396070 Zm00039ab396070_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab396170 Zm00039ab396170_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab396260 Zm00039ab396260_P001 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab396310 Zm00039ab396310_P001 conditional PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P001 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P001 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P001 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P001 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P002 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P002 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P002 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P002 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P003 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P003 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P003 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P003 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P004 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P004 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P004 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P004 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P005 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P005 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P005 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P005 expected PWYQT-4429 CO2 fixation into oxaloacetate (anaplerotic) RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P006 ubiquitous PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P006 manual PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P006 manual CYANCAT-PWY cyanate degradation RXN0-5224 EC-4.2.1.1 Zm00039ab396420 Zm00039ab396420_P006 expected PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab396630 Zm00039ab396630_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab396630 Zm00039ab396630_P001 conditional PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab396790 Zm00039ab396790_P001 viridiplantae PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II PRPPAMIDOTRANS-RXN EC-2.4.2.14 Zm00039ab396790 Zm00039ab396790_P001 conditional PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-11371 EC-2.5.1.108 Zm00039ab397030 Zm00039ab397030_P001 expected PWY-6482 diphthamide biosynthesis I (archaea) RXN-11371 EC-2.5.1.108 Zm00039ab397030 Zm00039ab397030_P001 expected PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00039ab397170 Zm00039ab397170_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIHYDRODIPICSYN-RXN EC-4.3.3.7 Zm00039ab397170 Zm00039ab397170_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab397190 Zm00039ab397190_P001 viridiplantae PWY-1422 vitamin E biosynthesis (tocopherols) RXN-2541 EC-2.5.1.115 Zm00039ab397290 Zm00039ab397290_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P001 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P002 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P003 NA PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab397360 Zm00039ab397360_P004 NA SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab397480 Zm00039ab397480_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab397480 Zm00039ab397480_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 viridiplantae PWY66-399 gluconeogenesis III F16BDEPHOS-RXN EC-3.1.3.11 Zm00039ab397730 Zm00039ab397730_P001 conditional PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00039ab397800 Zm00039ab397800_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00039ab397800 Zm00039ab397800_P002 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00039ab397800 Zm00039ab397800_P003 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00039ab397800 Zm00039ab397800_P004 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOATE-DEIMINASE-RXN EC-3.5.3.9 Zm00039ab397800 Zm00039ab397800_P005 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab397930 Zm00039ab397930_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab397940 Zm00039ab397940_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P001 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P001 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P001 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P001 excluded PWY-6352 3-phosphoinositide biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P002 expected PHOSLIPSYN2-PWY superpathway of phospholipid biosynthesis II (plants) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P002 ubiquitous PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P002 expected PWY-7625 phosphatidylinositol biosynthesis II (eukaryotes) 2.7.8.11-RXN EC-2.7.8.11 Zm00039ab397960 Zm00039ab397960_P002 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab398010 Zm00039ab398010_P001 excluded PWY-5963 thio-molybdenum cofactor biosynthesis RXN-8351 EC-2.8.1.9 Zm00039ab398010 Zm00039ab398010_P002 excluded PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab398230 Zm00039ab398230_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab398230 Zm00039ab398230_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab398240 Zm00039ab398240_P002 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P002 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P003 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab398520 Zm00039ab398520_P003 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab398610 Zm00039ab398610_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398610 Zm00039ab398610_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398610 Zm00039ab398610_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab398630 Zm00039ab398630_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab398690 Zm00039ab398690_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab398690 Zm00039ab398690_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab398690 Zm00039ab398690_P002 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab398690 Zm00039ab398690_P002 viridiplantae PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab398700 Zm00039ab398700_P001 viridiplantae PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab398760 Zm00039ab398760_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab398760 Zm00039ab398760_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P002 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab398790 Zm00039ab398790_P003 expected LIPASYN-PWY phospholipases PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab398940 Zm00039ab398940_P001 ubiquitous PWY-6803 phosphatidylcholine acyl editing PHOSPHOLIPASE-A1-RXN EC-3.1.1.32 Zm00039ab398940 Zm00039ab398940_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab399170 Zm00039ab399170_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab399170 Zm00039ab399170_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab399170 Zm00039ab399170_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab399170 Zm00039ab399170_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab399530 Zm00039ab399530_P001 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab399530 Zm00039ab399530_P002 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab399530 Zm00039ab399530_P003 expected TRESYN-PWY trehalose biosynthesis I TREHALOSEPHOSPHA-RXN EC-3.1.3.12 Zm00039ab399530 Zm00039ab399530_P004 expected PROUT-PWY L-proline degradation RXN-14903 EC-1.5.5.2 Zm00039ab399690 Zm00039ab399690_P001 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab399690 Zm00039ab399690_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis RXN-14903 EC-1.5.5.2 Zm00039ab399690 Zm00039ab399690_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab399850 Zm00039ab399850_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab399850 Zm00039ab399850_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab399850 Zm00039ab399850_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P001 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P001 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P002 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P002 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P003 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P003 conditional PWY-702 L-methionine biosynthesis II (plants) CYSPH-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P004 viridiplantae PWY-801 homocysteine and cysteine interconversion O-SUCCHOMOSERLYASE-RXN EC-2.5.1.48 Zm00039ab399920 Zm00039ab399920_P004 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab399980 Zm00039ab399980_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion RXN-12198 EC-3.6.1.6 Zm00039ab400020 Zm00039ab400020_P001 NA PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P002 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P002 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P003 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab400020 Zm00039ab400020_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12196 EC-3.6.1.15 Zm00039ab400020 Zm00039ab400020_P004 NA PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I RXN-12195 EC-3.6.1.15 Zm00039ab400020 Zm00039ab400020_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 NA PWY-5690 TCA cycle II (plants and fungi) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 viridiplantae GLYOXYLATE-BYPASS glyoxylate cycle MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 conditional MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 expected PWY-7047 malate-oxaloacetate shuttle I MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 NA PWY66-399 gluconeogenesis III MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 conditional PWY-7048 malate-oxaloacetate shuttle II MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 NA PWYQT-4481 TCA cycle variation V (plant) MALATE-DEH-RXN EC-1.1.1.37 Zm00039ab400060 Zm00039ab400060_P001 NA PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab400090 Zm00039ab400090_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab400090 Zm00039ab400090_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab400090 Zm00039ab400090_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab400090 Zm00039ab400090_P002 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab400160 Zm00039ab400160_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab400160 Zm00039ab400160_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab400160 Zm00039ab400160_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab400310 Zm00039ab400310_P001 NA PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P001 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P001 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P001 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P002 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P002 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P002 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P003 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P003 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P003 ubiquitous PWY-7039 phosphatidate metabolism, as a signaling molecule PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P004 conditional LIPASYN-PWY phospholipases PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P004 ubiquitous PWY-3561 choline biosynthesis III PHOSCHOL-RXN EC-3.1.4.4 Zm00039ab400410 Zm00039ab400410_P004 ubiquitous PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P001 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P001 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P001 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P001 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P002 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P002 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P002 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P002 expected PWY-7394 urate conversion to allantoin II 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P003 conditional PWY-5691 urate conversion to allantoin I 3.5.2.17-RXN EC-3.5.2.17 Zm00039ab400430 Zm00039ab400430_P003 expected PWY-7394 urate conversion to allantoin II RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P003 conditional PWY-5691 urate conversion to allantoin I RXN-6201 EC-4.1.1.97 Zm00039ab400430 Zm00039ab400430_P003 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab400690 Zm00039ab400690_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab400690 Zm00039ab400690_P002 expected PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P001 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P002 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P002 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P002 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P003 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P003 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P003 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 3-OXOACYL-ACP-SYNTH-BASE-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P004 expected FASYN-ELONG-PWY fatty acid elongation -- saturated 3-OXOACYL-ACP-SYNTH-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P004 viridiplantae PWY-5973 cis-vaccenate biosynthesis 2.3.1.179-RXN EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P004 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9516 EC-2.3.1.179 Zm00039ab400700 Zm00039ab400700_P004 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab400770 Zm00039ab400770_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab400860 Zm00039ab400860_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab400980 Zm00039ab400980_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab400980 Zm00039ab400980_P002 NA PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab401150 Zm00039ab401150_P001 viridiplantae PWY-735 jasmonic acid biosynthesis ALLENE-OXIDE-CYCLASE-RXN EC-5.3.99.6 Zm00039ab401290 Zm00039ab401290_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab401400 Zm00039ab401400_P002 conditional PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab401480 Zm00039ab401480_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab401550 Zm00039ab401550_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab401550 Zm00039ab401550_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab401550 Zm00039ab401550_P001 conditional PWY-4621 arsenate detoxification II (glutaredoxin) RXN-982 EC-1.20.4.1 Zm00039ab401650 Zm00039ab401650_P001 conditional PWY-4601 arsenate reduction (respiratory) 1.20.99.1-RXN EC-1.20.99.1 Zm00039ab401650 Zm00039ab401650_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8608 EC-4.2.3.73 Zm00039ab402020 Zm00039ab402020_P001 conditional PWY-6291 valencene and 7-epi-α-selinene biosynthesis RXN-8609 EC-4.2.3.86 Zm00039ab402020 Zm00039ab402020_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P001 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P001 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P001 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P002 conditional PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P002 expected LIPASYN-PWY phospholipases 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P002 ubiquitous PWY-6367 D-myo-inositol-5-phosphate metabolism 3.1.4.11-RXN EC-3.1.4.11 Zm00039ab402090 Zm00039ab402090_P002 conditional PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab402110 Zm00039ab402110_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab402140 Zm00039ab402140_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab402140 Zm00039ab402140_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab402140 Zm00039ab402140_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab402140 Zm00039ab402140_P002 viridiplantae PWY-6352 3-phosphoinositide biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab402240 Zm00039ab402240_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 2.7.1.68-RXN EC-2.7.1.68 Zm00039ab402240 Zm00039ab402240_P001 expected PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab402360 Zm00039ab402360_P001 ubiquitous DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P001 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P002 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P003 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P003 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P004 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P004 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P005 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P005 expected DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P006 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab402460 Zm00039ab402460_P006 expected PWY-842 starch degradation I RXN-15909 EC-3.2.1.2 Zm00039ab402470 Zm00039ab402470_P001 conditional PWY-6724 starch degradation II RXN-12278 EC-3.2.1.2 Zm00039ab402470 Zm00039ab402470_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab402580 Zm00039ab402580_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab402580 Zm00039ab402580_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P002 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P002 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab402850 Zm00039ab402850_P002 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab403080 Zm00039ab403080_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab403080 Zm00039ab403080_P002 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab403320 Zm00039ab403320_P003 expected PWY-5337 stachyose biosynthesis 2.4.1.123-RXN EC-2.4.1.123 Zm00039ab403460 Zm00039ab403460_P001 expected OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab403500 Zm00039ab403500_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab403550 Zm00039ab403550_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab403620 Zm00039ab403620_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P002 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P003 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P003 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P004 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P004 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis AMPSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P005 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II AICARSYN-RXN EC-4.3.2.2 Zm00039ab403660 Zm00039ab403660_P005 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab403710 Zm00039ab403710_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab403900 Zm00039ab403900_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab403900 Zm00039ab403900_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab403900 Zm00039ab403900_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab403900 Zm00039ab403900_P004 NA PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab403930 Zm00039ab403930_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab403930 Zm00039ab403930_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab403950 Zm00039ab403950_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab403950 Zm00039ab403950_P001 ubiquitous PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00039ab403970 Zm00039ab403970_P001 conditional PWY-7356 thiamine salvage IV (yeast) THIAMINASE-RXN EC-3.5.99.2 Zm00039ab403970 Zm00039ab403970_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab404000 Zm00039ab404000_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab404010 Zm00039ab404010_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404030 Zm00039ab404030_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404030 Zm00039ab404030_P001 ubiquitous PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404050 Zm00039ab404050_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404050 Zm00039ab404050_P001 ubiquitous PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab404070 Zm00039ab404070_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404080 Zm00039ab404080_P001 conditional PWY-5957 L-nicotianamine biosynthesis 2.5.1.43-RXN EC-2.5.1.43 Zm00039ab404080 Zm00039ab404080_P001 ubiquitous PWY66-21 ethanol degradation II ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab404160 Zm00039ab404160_P001 expected PWY0-1313 acetate conversion to acetyl-CoA ACETATE--COA-LIGASE-RXN EC-6.2.1.1 Zm00039ab404160 Zm00039ab404160_P001 expected TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P001 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P001 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P001 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P001 NA TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis RXN-1381 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P002 viridiplantae PWY-5667 CDP-diacylglycerol biosynthesis I RXN-1381 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P002 viridiplantae PWY0-1319 CDP-diacylglycerol biosynthesis II RXN-10462 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P002 viridiplantae PWYQT-4482 CDP-diacylglycerol biosynthesis IV RXNQT-4391 EC-2.3.1.15 Zm00039ab404180 Zm00039ab404180_P002 NA PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab404190 Zm00039ab404190_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00039ab404210 Zm00039ab404210_P001 conditional PWY-4984 urea cycle ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00039ab404210 Zm00039ab404210_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00039ab404210 Zm00039ab404210_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINLYA-RXN EC-4.3.2.1 Zm00039ab404210 Zm00039ab404210_P001 viridiplantae PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab404240 Zm00039ab404240_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab404240 Zm00039ab404240_P001 ubiquitous PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab404410 Zm00039ab404410_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab404410 Zm00039ab404410_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab404410 Zm00039ab404410_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab404420 Zm00039ab404420_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab404420 Zm00039ab404420_P002 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab404420 Zm00039ab404420_P003 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab404420 Zm00039ab404420_P004 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab404450 Zm00039ab404450_P001 expected PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab404490 Zm00039ab404490_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-7737 EC-2.6.1.83 Zm00039ab404500 Zm00039ab404500_P001 viridiplantae PWY-695 abscisic acid biosynthesis 1.1.1.288-RXN EC-1.1.1.288 Zm00039ab404530 Zm00039ab404530_P001 ubiquitous PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab404680 Zm00039ab404680_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.140-RXN EC-2.7.1.140 Zm00039ab404680 Zm00039ab404680_P001 NA PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab404680 Zm00039ab404680_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7184 EC-2.7.1.151 Zm00039ab404680 Zm00039ab404680_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7162 EC-2.7.1.151 Zm00039ab404680 Zm00039ab404680_P001 NA ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab404840 Zm00039ab404840_P001 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab404840 Zm00039ab404840_P002 viridiplantae PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P001 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P001 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P001 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P001 NA PWY-5997 α-linolenate biosynthesis I (plants and red algae) RXN-9667 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P002 expected PWY-762 phospholipid desaturation RXN-1727 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P002 ubiquitous PWY-782 glycolipid desaturation RXN-8295 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P002 ubiquitous PWY-7590 (7Z,10Z,13Z)-hexadecatrienoate biosynthesis RXN-16049 EC-1.14.19.35 Zm00039ab404900 Zm00039ab404900_P002 NA PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab404960 Zm00039ab404960_P001 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab404960 Zm00039ab404960_P002 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab404970 Zm00039ab404970_P001 expected PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab405010 Zm00039ab405010_P001 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab405010 Zm00039ab405010_P002 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab405010 Zm00039ab405010_P003 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab405010 Zm00039ab405010_P003 viridiplantae PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab405010 Zm00039ab405010_P004 conditional PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) PREPHENATEDEHYDRAT-RXN EC-4.2.1.51 Zm00039ab405010 Zm00039ab405010_P005 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab405030 Zm00039ab405030_P001 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab405030 Zm00039ab405030_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab405030 Zm00039ab405030_P003 viridiplantae PWY-5269 cardiolipin biosynthesis II RXN-8141 EC-2.7.8.41 Zm00039ab405120 Zm00039ab405120_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405260 Zm00039ab405260_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405260 Zm00039ab405260_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab405320 Zm00039ab405320_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab405330 Zm00039ab405330_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab405520 Zm00039ab405520_P001 expected PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab405520 Zm00039ab405520_P002 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P001 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P002 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P003 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P004 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P005 viridiplantae PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab405530 Zm00039ab405530_P006 viridiplantae PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab405760 Zm00039ab405760_P001 expected PWY-7204 pyridoxal 5'-phosphate salvage II (plants) RXN-14181 EC-3.1.3.74 Zm00039ab405760 Zm00039ab405760_P002 expected ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab405790 Zm00039ab405790_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab405790 Zm00039ab405790_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P002 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab406050 Zm00039ab406050_P003 conditional PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P001 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P001 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P002 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P002 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P003 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P003 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P004 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P004 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P005 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P005 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P006 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P006 expected PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) RXN-9235 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P007 expected PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) RXN-9242 EC-2.1.1.201 Zm00039ab406220 Zm00039ab406220_P007 expected PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab406360 Zm00039ab406360_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab406360 Zm00039ab406360_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab406360 Zm00039ab406360_P001 conditional PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab406470 Zm00039ab406470_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab406470 Zm00039ab406470_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab406470 Zm00039ab406470_P002 manual PWY-6724 starch degradation II RXN-12203 EC-2.7.9.4 Zm00039ab406500 Zm00039ab406500_P001 conditional PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P005 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P006 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P007 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate CHORISMATE-SYNTHASE-RXN EC-4.2.3.5 Zm00039ab406530 Zm00039ab406530_P008 viridiplantae PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00039ab406620 Zm00039ab406620_P001 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00039ab406620 Zm00039ab406620_P002 ubiquitous PWY-922 mevalonate pathway I PHOSPHOMEVALONATE-KINASE-RXN EC-2.7.4.2 Zm00039ab406620 Zm00039ab406620_P003 ubiquitous PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab406640 Zm00039ab406640_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SERINE-C-PALMITOYLTRANSFERASE-RXN EC-2.3.1.50 Zm00039ab406640 Zm00039ab406640_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab406700 Zm00039ab406700_P001 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab406700 Zm00039ab406700_P002 viridiplantae PWY-4861 UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate) UDP-GLUCURONATE-4-EPIMERASE-RXN EC-5.1.3.6 Zm00039ab406700 Zm00039ab406700_P003 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab406800 Zm00039ab406800_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab406800 Zm00039ab406800_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab406800 Zm00039ab406800_P001 conditional PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab406850 Zm00039ab406850_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI RXN-14014 EC-1.17.1.8 Zm00039ab406850 Zm00039ab406850_P002 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab406960 Zm00039ab406960_P001 expected PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab406970 Zm00039ab406970_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab406980 Zm00039ab406980_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab407270 Zm00039ab407270_P001 expected PWY-4321 L-glutamate degradation IV GLUTDECARBOX-RXN EC-4.1.1.15 Zm00039ab407270 Zm00039ab407270_P002 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab407280 Zm00039ab407280_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab407300 Zm00039ab407300_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab407300 Zm00039ab407300_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab407300 Zm00039ab407300_P001 conditional PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab407410 Zm00039ab407410_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab407410 Zm00039ab407410_P002 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab407410 Zm00039ab407410_P003 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab407410 Zm00039ab407410_P003 NA PWY-5670 epoxysqualene biosynthesis SQUALENE-MONOOXYGENASE-RXN EC-1.14.14.17 Zm00039ab407430 Zm00039ab407430_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab407630 Zm00039ab407630_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab407630 Zm00039ab407630_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab407700 Zm00039ab407700_P001 expected PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P002 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab407850 Zm00039ab407850_P003 NA PWY-5441 S-methyl-L-methionine cycle MMUM-RXN EC-2.1.1.10 Zm00039ab407920 Zm00039ab407920_P001 ubiquitous PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab407930 Zm00039ab407930_P002 conditional PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab408110 Zm00039ab408110_P001 expected PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab408110 Zm00039ab408110_P002 expected PWY-5116 sakuranetin biosynthesis RXN-7773 EC-2.1.1.232 Zm00039ab408250 Zm00039ab408250_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P006 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab408340 Zm00039ab408340_P007 conditional PWY-5968 cinnamate esters biosynthesis CINNAMATE-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.177 Zm00039ab408410 Zm00039ab408410_P001 conditional PWY-7186 superpathway of scopolin and esculin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab408410 Zm00039ab408410_P001 NA PWY4FS-10 scopolin biosynthesis SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN EC-2.4.1.128 Zm00039ab408410 Zm00039ab408410_P001 NA PWY-116 coniferin metabolism 2.4.1.111-RXN EC-2.4.1.111 Zm00039ab408410 Zm00039ab408410_P001 conditional PWY-83 monolignol glucosides biosynthesis RXN-90 EC-2.4.1.111 Zm00039ab408410 Zm00039ab408410_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) 2.4.1.114-RXN EC-2.4.1.114 Zm00039ab408410 Zm00039ab408410_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab408420 Zm00039ab408420_P001 expected PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab408560 Zm00039ab408560_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab408560 Zm00039ab408560_P001 viridiplantae PWY-5659 GDP-mannose biosynthesis 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab408560 Zm00039ab408560_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) 2.7.7.13-RXN EC-2.7.7.13 Zm00039ab408560 Zm00039ab408560_P002 viridiplantae ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab408770 Zm00039ab408770_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab408770 Zm00039ab408770_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab408850 Zm00039ab408850_P001 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab408850 Zm00039ab408850_P002 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab408850 Zm00039ab408850_P003 viridiplantae PWY-5340 sulfate activation for sulfonation ADENYLYLSULFKIN-RXN EC-2.7.1.25 Zm00039ab408850 Zm00039ab408850_P004 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408860 Zm00039ab408860_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P002 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P003 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P005 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab408870 Zm00039ab408870_P006 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab409260 Zm00039ab409260_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab409260 Zm00039ab409260_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab409260 Zm00039ab409260_P001 expected PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P001 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P001 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P002 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P002 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P003 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P003 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P004 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P004 viridiplantae PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P005 expected PWY-2301 myo-inositol biosynthesis MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN EC-5.5.1.4 Zm00039ab409300 Zm00039ab409300_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab409730 Zm00039ab409730_P001 viridiplantae PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab409850 Zm00039ab409850_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab409850 Zm00039ab409850_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab409850 Zm00039ab409850_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab409870 Zm00039ab409870_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab409870 Zm00039ab409870_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab409870 Zm00039ab409870_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P004 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P005 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab409910 Zm00039ab409910_P006 viridiplantae PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00039ab410130 Zm00039ab410130_P001 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00039ab410130 Zm00039ab410130_P003 ubiquitous PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I RXN-13072 EC-3.5.1.111 Zm00039ab410130 Zm00039ab410130_P005 ubiquitous PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab410180 Zm00039ab410180_P001 viridiplantae PWY-7856 heme a biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab410390 Zm00039ab410390_P001 expected PWYQT-62 superpathway of proto- and siroheme biosynthesis HEMEOSYN-RXN EC-2.5.1.141 Zm00039ab410390 Zm00039ab410390_P001 NA CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P001 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P001 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P002 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P002 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P003 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P003 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P004 viridiplantae PWY-5723 Rubisco shunt RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P004 conditional NONOXIPENT-PWY pentose phosphate pathway (non-oxidative branch) RIBULP3EPIM-RXN EC-5.1.3.1 Zm00039ab410460 Zm00039ab410460_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab410490 Zm00039ab410490_P001 viridiplantae PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P001 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P001 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P002 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P002 conditional PWY-6733 sporopollenin precursors biosynthesis RXN-16403 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P003 conditional PWY-5884 wax esters biosynthesis I RXN-9344 EC-1.2.1.84 Zm00039ab410540 Zm00039ab410540_P003 conditional PWY-1042 glycolysis IV (plant cytosol) 2.7.1.90-RXN EC-2.7.1.90 Zm00039ab410570 Zm00039ab410570_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab410690 Zm00039ab410690_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab410690 Zm00039ab410690_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab410690 Zm00039ab410690_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab410700 Zm00039ab410700_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab410700 Zm00039ab410700_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab410700 Zm00039ab410700_P001 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab410730 Zm00039ab410730_P001 NA PWY-2541 phytosterol biosynthesis (plants) 2.1.1.143-RXN EC-2.1.1.143 Zm00039ab410740 Zm00039ab410740_P001 ubiquitous PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab410900 Zm00039ab410900_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLURS-RXN EC-6.1.1.17 Zm00039ab410900 Zm00039ab410900_P002 viridiplantae ASPARAGINE-BIOSYNTHESIS L-asparagine biosynthesis I ASNSYNB-RXN EC-6.3.5.4 Zm00039ab411210 Zm00039ab411210_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab411310 Zm00039ab411310_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab411310 Zm00039ab411310_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab411310 Zm00039ab411310_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab411340 Zm00039ab411340_P001 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab411340 Zm00039ab411340_P003 conditional PWY-7394 urate conversion to allantoin II RXN-11186 EC-1.14.13.113 Zm00039ab411350 Zm00039ab411350_P001 conditional CITRULLINE-DEG-PWY L-citrulline degradation ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 expected PWY-4984 urea cycle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 viridiplantae PWY-7060 ornithine-citrulline shuttle ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 NA CITRULBIO-PWY L-citrulline biosynthesis ORNCARBAMTRANSFER-RXN EC-2.1.3.3 Zm00039ab411500 Zm00039ab411500_P001 expected PWY-3801 sucrose degradation II (sucrose synthase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab411560 Zm00039ab411560_P001 expected PWY-621 sucrose degradation III (sucrose invertase) FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab411560 Zm00039ab411560_P001 viridiplantae PWY-4101 D-sorbitol degradation I FRUCTOKINASE-RXN EC-2.7.1.4 Zm00039ab411560 Zm00039ab411560_P001 conditional PWY-1121 suberin monomers biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 conditional PWY-361 phenylpropanoid biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 conditional PWY-5048 rosmarinic acid biosynthesis I 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 conditional PWY-6673 caffeoylglucarate biosynthesis RXN-1126 EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 conditional PWY-7897 flavonoid di-C-glucosylation 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 NA PWY-5868 simple coumarins biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 NA PWY-6982 umbelliferone biosynthesis 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 expected PWY-7398 coumarins biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 NA PWY-6920 6-gingerol analog biosynthesis (engineered) 4-COUMARATE--COA-LIGASE-RXN EC-6.2.1.12 Zm00039ab411640 Zm00039ab411640_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab411710 Zm00039ab411710_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00039ab411820 Zm00039ab411820_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00039ab411820 Zm00039ab411820_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis PRTRANS-RXN EC-2.4.2.18 Zm00039ab411820 Zm00039ab411820_P003 viridiplantae PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab411870 Zm00039ab411870_P001 conditional PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab411940 Zm00039ab411940_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab411940 Zm00039ab411940_P001 conditional PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab412100 Zm00039ab412100_P001 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab412100 Zm00039ab412100_P002 ubiquitous PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab412100 Zm00039ab412100_P003 ubiquitous PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab412290 Zm00039ab412290_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab412290 Zm00039ab412290_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab412290 Zm00039ab412290_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P001 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P001 NA PWY-2161B-PMN folate polyglutamylation II RXN-3742 EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P002 NA PWY-2161 folate polyglutamylation FOLYLPOLYGLUTAMATESYNTH-RXN EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II RXN-6102 EC-6.3.2.17 Zm00039ab412380 Zm00039ab412380_P002 NA PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab412540 Zm00039ab412540_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab412540 Zm00039ab412540_P002 expected VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P001 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P001 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P001 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P002 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P002 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P002 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P003 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P003 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P003 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P003 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P004 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P004 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P004 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P004 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P005 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P005 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P005 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P005 viridiplantae VALDEG-PWY L-valine degradation I BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P006 viridiplantae VALSYN-PWY L-valine biosynthesis BRANCHED-CHAINAMINOTRANSFERVAL-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P006 viridiplantae ILEUDEG-PWY L-isoleucine degradation I BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P006 viridiplantae ILEUSYN-PWY L-isoleucine biosynthesis I (from threonine) BRANCHED-CHAINAMINOTRANSFERILEU-RXN EC-2.6.1.42 Zm00039ab412610 Zm00039ab412610_P006 viridiplantae PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00039ab412710 Zm00039ab412710_P001 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00039ab412710 Zm00039ab412710_P002 expected PWY-7909 formaldehyde oxidation VII (THF pathway) FORMYLTHFDEFORMYL-RXN EC-3.5.1.10 Zm00039ab412710 Zm00039ab412710_P003 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab412770 Zm00039ab412770_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab412770 Zm00039ab412770_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab412770 Zm00039ab412770_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab412780 Zm00039ab412780_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab412780 Zm00039ab412780_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab412780 Zm00039ab412780_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab412790 Zm00039ab412790_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab412790 Zm00039ab412790_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab412790 Zm00039ab412790_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab412800 Zm00039ab412800_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab412800 Zm00039ab412800_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab412800 Zm00039ab412800_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab412810 Zm00039ab412810_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab412920 Zm00039ab412920_P001 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab412920 Zm00039ab412920_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab412920 Zm00039ab412920_P002 viridiplantae GLUTORN-PWY L-ornithine biosynthesis I N-ACETYLTRANSFER-RXN EC-2.3.1.1 Zm00039ab412920 Zm00039ab412920_P002 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab413030 Zm00039ab413030_P001 conditional PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab413040 Zm00039ab413040_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab413180 Zm00039ab413180_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab413280 Zm00039ab413280_P002 NA LEUSYN-PWY L-leucine biosynthesis 2-ISOPROPYLMALATESYN-RXN EC-2.3.3.13 Zm00039ab413350 Zm00039ab413350_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab413480 Zm00039ab413480_P001 conditional PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab413480 Zm00039ab413480_P002 conditional PWY-622 starch biosynthesis GLUC1PADENYLTRANS-RXN EC-2.7.7.27 Zm00039ab413490 Zm00039ab413490_P001 viridiplantae PWY-6030 serotonin and melatonin biosynthesis ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN EC-2.1.1.4 Zm00039ab413500 Zm00039ab413500_P001 conditional UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II L-GLN-FRUCT-6-P-AMINOTRANS-RXN EC-2.6.1.16 Zm00039ab413580 Zm00039ab413580_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab413620 Zm00039ab413620_P001 conditional PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN EC-2.7.1.137 Zm00039ab413700 Zm00039ab413700_P001 expected HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab413830 Zm00039ab413830_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis HOMOSERDEHYDROG-RXN EC-1.1.1.3 Zm00039ab413830 Zm00039ab413830_P002 viridiplantae PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab413920 Zm00039ab413920_P001 expected PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab413960 Zm00039ab413960_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab413960 Zm00039ab413960_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab413960 Zm00039ab413960_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab413980 Zm00039ab413980_P001 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab413980 Zm00039ab413980_P002 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab414590 Zm00039ab414590_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab414590 Zm00039ab414590_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab414590 Zm00039ab414590_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab414590 Zm00039ab414590_P004 NA PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab414900 Zm00039ab414900_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab414900 Zm00039ab414900_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab414900 Zm00039ab414900_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab414900 Zm00039ab414900_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415030 Zm00039ab415030_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415040 Zm00039ab415040_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab415070 Zm00039ab415070_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab415070 Zm00039ab415070_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415090 Zm00039ab415090_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415100 Zm00039ab415100_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab415140 Zm00039ab415140_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab415140 Zm00039ab415140_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415150 Zm00039ab415150_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415150 Zm00039ab415150_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415160 Zm00039ab415160_P001 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab415200 Zm00039ab415200_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab415200 Zm00039ab415200_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab415250 Zm00039ab415250_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab415250 Zm00039ab415250_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab415280 Zm00039ab415280_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab415280 Zm00039ab415280_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415330 Zm00039ab415330_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab415340 Zm00039ab415340_P001 conditional PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab415450 Zm00039ab415450_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI DIAMINOPIMDECARB-RXN EC-4.1.1.20 Zm00039ab415450 Zm00039ab415450_P002 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00039ab415530 Zm00039ab415530_P001 viridiplantae GLYCLEAV-PWY glycine cleavage GCVP-RXN EC-1.4.4.2 Zm00039ab415530 Zm00039ab415530_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab415570 Zm00039ab415570_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab415620 Zm00039ab415620_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab415620 Zm00039ab415620_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab416280 Zm00039ab416280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab416280 Zm00039ab416280_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab416510 Zm00039ab416510_P001 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab416510 Zm00039ab416510_P002 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab416510 Zm00039ab416510_P003 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab416510 Zm00039ab416510_P004 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab416530 Zm00039ab416530_P002 NA GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P001 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P002 conditional GLUCONEO-PWY gluconeogenesis I F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 viridiplantae PWY66-399 gluconeogenesis III F16ALDOLASE-RXN EC-4.1.2.13 Zm00039ab416720 Zm00039ab416720_P003 conditional PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab416950 Zm00039ab416950_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab417120 Zm00039ab417120_P001 viridiplantae PYRUVDEHYD-PWY pyruvate decarboxylation to acetyl CoA RXN0-1133 EC-2.3.1.12 Zm00039ab417120 Zm00039ab417120_P002 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab417180 Zm00039ab417180_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab417180 Zm00039ab417180_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab417180 Zm00039ab417180_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab417180 Zm00039ab417180_P002 conditional PWY-6710 poly-hydroxy fatty acids biosynthesis RXN-12134 EC-3.3.2.10 Zm00039ab417400 Zm00039ab417400_P001 conditional PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) RXN-1884 EC-1.1.1.316 Zm00039ab417410 Zm00039ab417410_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITDEH-RXN EC-1.1.1.42 Zm00039ab417440 Zm00039ab417440_P001 conditional PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00039ab417450 Zm00039ab417450_P001 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00039ab417450 Zm00039ab417450_P002 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00039ab417450 Zm00039ab417450_P003 viridiplantae PWY-6475 trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria) RXN-11354 EC-5.2.1.12 Zm00039ab417450 Zm00039ab417450_P004 viridiplantae PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab417670 Zm00039ab417670_P001 ubiquitous PWY-695 abscisic acid biosynthesis RXN-698 EC-1.13.11.51 Zm00039ab417720 Zm00039ab417720_P001 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P001 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P002 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P003 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P004 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P005 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P006 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P007 viridiplantae PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab417750 Zm00039ab417750_P008 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab417790 Zm00039ab417790_P001 viridiplantae PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab417950 Zm00039ab417950_P001 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab417950 Zm00039ab417950_P002 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab417950 Zm00039ab417950_P003 expected PWY-6527 stachyose degradation RXN-11501 EC-3.2.1.22 Zm00039ab417950 Zm00039ab417950_P005 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab417960 Zm00039ab417960_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab417960 Zm00039ab417960_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab417960 Zm00039ab417960_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab417960 Zm00039ab417960_P002 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P001 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P001 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P002 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P002 conditional PWY-581 indole-3-acetate biosynthesis II RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P003 conditional PWYQT-4476 indole glucosinolate activation (herbivore attack) RXN-1404 EC-3.5.5.1 Zm00039ab418100 Zm00039ab418100_P003 conditional PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab418360 Zm00039ab418360_P001 conditional VALDEG-PWY L-valine degradation I 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN EC-3.1.2.4 Zm00039ab418380 Zm00039ab418380_P001 viridiplantae PWY-3941 β-alanine biosynthesis II RXN-6384 EC-3.1.2.4 Zm00039ab418380 Zm00039ab418380_P001 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab418380 Zm00039ab418380_P002 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab418380 Zm00039ab418380_P002 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab418380 Zm00039ab418380_P002 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab418380 Zm00039ab418380_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab418380 Zm00039ab418380_P002 viridiplantae PWY-5136 fatty acid β-oxidation II (peroxisome) ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab418390 Zm00039ab418390_P001 viridiplantae VALDEG-PWY L-valine degradation I METHYLACYLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab418390 Zm00039ab418390_P001 viridiplantae ILEUDEG-PWY L-isoleucine degradation I TIGLYLCOA-HYDROXY-RXN EC-4.2.1.17 Zm00039ab418390 Zm00039ab418390_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation ENOYL-COA-HYDRAT-RXN EC-4.2.1.17 Zm00039ab418390 Zm00039ab418390_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10697 EC-4.2.1.17 Zm00039ab418390 Zm00039ab418390_P001 viridiplantae PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00039ab418500 Zm00039ab418500_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00039ab418520 Zm00039ab418520_P001 conditional PWY-6724 starch degradation II RXN-12204 EC-2.7.9.5 Zm00039ab418520 Zm00039ab418520_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab418580 Zm00039ab418580_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATE-SYNTHASE-RXN EC-2.4.1.14 Zm00039ab418580 Zm00039ab418580_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab418750 Zm00039ab418750_P001 expected PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P001 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P001 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P002 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P002 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P003 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P003 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P004 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P004 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P005 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P005 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P006 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P006 excluded PWY-3742 tetrahydrofolate biosynthesis II DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P007 NA PWY-6614 tetrahydrofolate biosynthesis DIHYDROFOLATESYNTH-RXN EC-6.3.2.12 Zm00039ab418810 Zm00039ab418810_P007 excluded XYLCAT-PWY D-xylose degradation I XYLISOM-RXN EC-5.3.1.5 Zm00039ab418850 Zm00039ab418850_P001 expected PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P001 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P002 ubiquitous PWY-7224 purine deoxyribonucleosides salvage DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 conditional PWY-7176 UTP and CTP de novo biosynthesis UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 viridiplantae PWY-5687 pyrimidine ribonucleotides interconversion UDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 NA PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis DADPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 ubiquitous PWY-7205 CMP phosphorylation CDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 expected PWY0-166 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 viridiplantae PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I DCDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 viridiplantae PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 NA PWY-7197 pyrimidine deoxyribonucleotide phosphorylation DTDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 expected PWY-7221 guanosine ribonucleotides de novo biosynthesis GDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 viridiplantae PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I DGDPKIN-RXN EC-2.7.4.6 Zm00039ab418970 Zm00039ab418970_P003 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00039ab418980 Zm00039ab418980_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00039ab418980 Zm00039ab418980_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00039ab418980 Zm00039ab418980_P003 viridiplantae PWY-922 mevalonate pathway I HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN EC-2.3.3.10 Zm00039ab419120 Zm00039ab419120_P001 ubiquitous RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOFLAVIN-SYN-RXN EC-2.5.1.9 Zm00039ab419200 Zm00039ab419200_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab419260 Zm00039ab419260_P001 viridiplantae PWY-2261 ascorbate glutathione cycle 1.8.5.1-RXN EC-1.8.5.1 Zm00039ab419300 Zm00039ab419300_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P001 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P002 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P002 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P002 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P002 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P002 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P003 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P003 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P003 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P003 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P004 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P004 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P004 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P004 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P004 viridiplantae GLUCONEO-PWY gluconeogenesis I 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P005 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P005 viridiplantae PWY-5723 Rubisco shunt 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P005 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P005 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 3PGAREARR-RXN EC-5.4.2.12 Zm00039ab419340 Zm00039ab419340_P005 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab419420 Zm00039ab419420_P001 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab419420 Zm00039ab419420_P002 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab419420 Zm00039ab419420_P003 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab419420 Zm00039ab419420_P004 viridiplantae PWY-6163 chorismate biosynthesis from 3-dehydroquinate SHIKIMATE-5-DEHYDROGENASE-RXN EC-1.1.1.25 Zm00039ab419420 Zm00039ab419420_P005 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab419470 Zm00039ab419470_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab419470 Zm00039ab419470_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab419470 Zm00039ab419470_P001 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab419580 Zm00039ab419580_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab419580 Zm00039ab419580_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab419580 Zm00039ab419580_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab419580 Zm00039ab419580_P005 NA PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab419600 Zm00039ab419600_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab419600 Zm00039ab419600_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P001 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P002 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P003 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P004 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P005 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P006 viridiplantae PWY-7221 guanosine ribonucleotides de novo biosynthesis GUANYL-KIN-RXN EC-2.7.4.8 Zm00039ab419620 Zm00039ab419620_P007 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab419890 Zm00039ab419890_P001 viridiplantae PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab419940 Zm00039ab419940_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab419940 Zm00039ab419940_P001 viridiplantae PWY-3801 sucrose degradation II (sucrose synthase) SUCROSE-SYNTHASE-RXN EC-2.4.1.13 Zm00039ab420110 Zm00039ab420110_P001 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P002 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P002 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P002 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P003 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P003 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P003 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P004 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P004 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P004 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P005 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P005 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P005 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P006 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P006 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P006 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P007 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P007 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P007 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P008 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P008 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P008 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P009 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P009 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab420120 Zm00039ab420120_P009 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab420210 Zm00039ab420210_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab420210 Zm00039ab420210_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab420210 Zm00039ab420210_P003 conditional PWY-6237 nucleobase ascorbate transport I RXN0-901 EC-1.17.1.4 Zm00039ab420280 Zm00039ab420280_P001 NA PWY-6607 guanosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab420280 Zm00039ab420280_P001 viridiplantae PWY-6606 guanosine nucleotides degradation II RXN0-901 EC-1.17.1.4 Zm00039ab420280 Zm00039ab420280_P001 viridiplantae PWY-6596 adenosine nucleotides degradation I RXN0-901 EC-1.17.1.4 Zm00039ab420280 Zm00039ab420280_P001 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420330 Zm00039ab420330_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420330 Zm00039ab420330_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420330 Zm00039ab420330_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420330 Zm00039ab420330_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420330 Zm00039ab420330_P003 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420330 Zm00039ab420330_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420330 Zm00039ab420330_P004 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420330 Zm00039ab420330_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420330 Zm00039ab420330_P005 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420330 Zm00039ab420330_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420370 Zm00039ab420370_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420370 Zm00039ab420370_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420370 Zm00039ab420370_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420370 Zm00039ab420370_P002 conditional TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab420610 Zm00039ab420610_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab420760 Zm00039ab420760_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab420760 Zm00039ab420760_P001 conditional PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P001 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P001 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P001 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P001 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P002 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P002 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P002 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P002 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P003 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P003 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P003 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P003 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P004 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P004 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P004 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P004 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P005 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P005 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P005 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P005 viridiplantae PWY-4983 nitric oxide biosynthesis II (mammals) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P006 conditional PWY-4984 urea cycle ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P006 expected ARGSYN-PWY L-arginine biosynthesis I (via L-ornithine) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P006 viridiplantae ARGSYNBSUB-PWY L-arginine biosynthesis II (acetyl cycle) ARGSUCCINSYN-RXN EC-6.3.4.5 Zm00039ab420800 Zm00039ab420800_P006 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab420820 Zm00039ab420820_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-8678 EC-1.23.1.1 Zm00039ab420880 Zm00039ab420880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00039ab420880 Zm00039ab420880_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab421130 Zm00039ab421130_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab421130 Zm00039ab421130_P001 expected PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab421210 Zm00039ab421210_P001 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab421210 Zm00039ab421210_P001 NA PWY-7183 pyrimidine nucleobases salvage I URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab421210 Zm00039ab421210_P002 expected PWYQT-4445 pyrimidine salvage pathway URACIL-PRIBOSYLTRANS-RXN EC-2.4.2.9 Zm00039ab421210 Zm00039ab421210_P002 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab421240 Zm00039ab421240_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab421240 Zm00039ab421240_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab421240 Zm00039ab421240_P001 conditional PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00039ab421470 Zm00039ab421470_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00039ab421470 Zm00039ab421470_P001 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00039ab421470 Zm00039ab421470_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00039ab421470 Zm00039ab421470_P002 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00039ab421470 Zm00039ab421470_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00039ab421470 Zm00039ab421470_P003 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00039ab421470 Zm00039ab421470_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00039ab421470 Zm00039ab421470_P004 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DAPASYN-RXN EC-2.6.1.62 Zm00039ab421470 Zm00039ab421470_P005 viridiplantae PWY0-1507 biotin biosynthesis from 8-amino-7-oxononanoate I DETHIOBIOTIN-SYN-RXN EC-6.3.3.3 Zm00039ab421470 Zm00039ab421470_P005 viridiplantae PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab421550 Zm00039ab421550_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis RXN-12667 EC-2.3.1.57 Zm00039ab421550 Zm00039ab421550_P002 conditional PWY-102 gibberellin inactivation I (2β-hydroxylation) RXN-115 EC-1.14.11.13 Zm00039ab421630 Zm00039ab421630_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab421670 Zm00039ab421670_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421770 Zm00039ab421770_P001 conditional DETOX1-PWY superoxide radicals degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab421780 Zm00039ab421780_P001 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation SUPEROX-DISMUT-RXN EC-1.15.1.1 Zm00039ab421780 Zm00039ab421780_P001 expected PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab421870 Zm00039ab421870_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II H2NEOPTERINALDOL-RXN EC-4.1.2.25 Zm00039ab421870 Zm00039ab421870_P001 NA PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00039ab421880 Zm00039ab421880_P001 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00039ab421880 Zm00039ab421880_P002 viridiplantae PWY-5686 UMP biosynthesis I ASPCARBTRANS-RXN EC-2.1.3.2 Zm00039ab421880 Zm00039ab421880_P003 viridiplantae PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab421930 Zm00039ab421930_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab421940 Zm00039ab421940_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab421950 Zm00039ab421950_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab421960 Zm00039ab421960_P001 conditional PWY-6888 zealexin biosynthesis RXN-11903 EC-5.5.1.17 Zm00039ab421970 Zm00039ab421970_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421980 Zm00039ab421980_P001 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421980 Zm00039ab421980_P002 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421980 Zm00039ab421980_P003 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421980 Zm00039ab421980_P004 conditional PWY-7039 phosphatidate metabolism, as a signaling molecule DIACYLGLYKIN-RXN EC-2.7.1.107 Zm00039ab421980 Zm00039ab421980_P005 conditional PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422070 Zm00039ab422070_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422070 Zm00039ab422070_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422070 Zm00039ab422070_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422070 Zm00039ab422070_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422070 Zm00039ab422070_P005 NA PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab422110 Zm00039ab422110_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab422120 Zm00039ab422120_P001 conditional PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00039ab422180 Zm00039ab422180_P001 ubiquitous PWY-762 phospholipid desaturation RXN-1725 EC-1.14.19.43 Zm00039ab422220 Zm00039ab422220_P001 ubiquitous PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab422290 Zm00039ab422290_P001 viridiplantae PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab422290 Zm00039ab422290_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab422360 Zm00039ab422360_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab422360 Zm00039ab422360_P002 viridiplantae PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab422370 Zm00039ab422370_P001 conditional PWY-5386 methylglyoxal degradation I GLYOXI-RXN EC-4.4.1.5 Zm00039ab422370 Zm00039ab422370_P002 conditional PWY-5670 epoxysqualene biosynthesis RXN-13162 EC-2.5.1.21 Zm00039ab422570 Zm00039ab422570_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P002 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P003 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab422580 Zm00039ab422580_P003 conditional PWY-6440 spermine and spermidine degradation II RXN-6421 EC-1.5.3.14 Zm00039ab422630 Zm00039ab422630_P001 expected PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422700 Zm00039ab422700_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422700 Zm00039ab422700_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422700 Zm00039ab422700_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422700 Zm00039ab422700_P004 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab422700 Zm00039ab422700_P005 NA PWY-6124 inosine-5'-phosphate biosynthesis II AICARTRANSFORM-RXN EC-2.1.2.3 Zm00039ab422720 Zm00039ab422720_P001 viridiplantae PWY-6124 inosine-5'-phosphate biosynthesis II IMPCYCLOHYDROLASE-RXN EC-3.5.4.10 Zm00039ab422720 Zm00039ab422720_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab422780 Zm00039ab422780_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab422780 Zm00039ab422780_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab422780 Zm00039ab422780_P003 viridiplantae PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab422810 Zm00039ab422810_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1102 EC-1.1.1.195 Zm00039ab422810 Zm00039ab422810_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13294 EC-2.3.1.199 Zm00039ab422840 Zm00039ab422840_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7697 EC-2.3.1.199 Zm00039ab422840 Zm00039ab422840_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16094 EC-2.3.1.199 Zm00039ab422840 Zm00039ab422840_P001 conditional PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P001 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P001 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P001 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P002 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P002 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P002 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P003 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P003 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P003 NA PWY-6663 plant sterol biosynthesis II CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P004 NA PWY-8028 cycloartenol biosynthesis CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P004 NA PWY-6115 avenacin biosynthesis, initial reactions CYCLOARTENOL-SYNTHASE-RXN EC-5.4.99.8 Zm00039ab422990 Zm00039ab422990_P004 NA PWY4FS-6 phosphatidylethanolamine biosynthesis II 2.7.7.14-RXN EC-2.7.7.14 Zm00039ab423050 Zm00039ab423050_P001 ubiquitous PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab423220 Zm00039ab423220_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab423220 Zm00039ab423220_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab423220 Zm00039ab423220_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8415 EC-4.2.3.104 Zm00039ab423220 Zm00039ab423220_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab423220 Zm00039ab423220_P003 conditional TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab423430 Zm00039ab423430_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab423430 Zm00039ab423430_P002 viridiplantae PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab423560 Zm00039ab423560_P001 NA PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN EC-5.1.3.15 Zm00039ab423560 Zm00039ab423560_P002 NA RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab423600 Zm00039ab423600_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab423600 Zm00039ab423600_P003 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab423680 Zm00039ab423680_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab423680 Zm00039ab423680_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab423680 Zm00039ab423680_P003 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab423680 Zm00039ab423680_P004 NA COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00039ab423690 Zm00039ab423690_P001 viridiplantae COA-PWY coenzyme A biosynthesis I (prokaryotic) P-PANTOCYSLIG-RXN EC-6.3.2.5 Zm00039ab423690 Zm00039ab423690_P002 viridiplantae PWY-6010 apigenin glycosides biosynthesis RXN-9700 EC-2.3.1.115 Zm00039ab423770 Zm00039ab423770_P001 conditional PWY-7185 UTP and CTP dephosphorylation I RXN-12199 EC-3.6.1.5 Zm00039ab423810 Zm00039ab423810_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-12200 EC-3.6.1.5 Zm00039ab423810 Zm00039ab423810_P001 NA PWY-7177 UTP and CTP dephosphorylation II RXN-12199 EC-3.6.1.5 Zm00039ab423810 Zm00039ab423810_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab423960 Zm00039ab423960_P005 ubiquitous PWY-5172 acetyl-CoA biosynthesis III (from citrate) ATP-CITRATE-PRO-S--LYASE-RXN EC-2.3.3.8 Zm00039ab424190 Zm00039ab424190_P001 viridiplantae PWY-5725 farnesene biosynthesis RXN-8422 EC-4.2.3.47 Zm00039ab424200 Zm00039ab424200_P001 conditional PWY-6888 zealexin biosynthesis RXN-8429 EC-4.2.3.55 Zm00039ab424200 Zm00039ab424200_P001 conditional PWY-6243 bergamotene biosynthesis I RXN-8621 EC-4.2.3.81 Zm00039ab424200 Zm00039ab424200_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab424340 Zm00039ab424340_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab424340 Zm00039ab424340_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab424350 Zm00039ab424350_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab424350 Zm00039ab424350_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00039ab424400 Zm00039ab424400_P001 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00039ab424400 Zm00039ab424400_P002 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00039ab424400 Zm00039ab424400_P003 conditional PWY-2981 diterpene phytoalexins precursors biosynthesis RXN-8528 EC-5.5.1.14 Zm00039ab424400 Zm00039ab424400_P004 conditional PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00039ab424440 Zm00039ab424440_P001 ubiquitous PWY-5032 ent-kaurene biosynthesis I 4.2.3.19-RXN EC-4.2.3.19 Zm00039ab424440 Zm00039ab424440_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P001 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P001 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P001 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P002 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P002 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P002 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P003 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P003 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P003 ubiquitous PWY3O-450 phosphatidylcholine biosynthesis I 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P004 conditional PWY-3561 choline biosynthesis III 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P004 ubiquitous PWY4FS-2 phosphatidylcholine biosynthesis II 2.7.7.15-RXN EC-2.7.7.15 Zm00039ab424590 Zm00039ab424590_P004 ubiquitous PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab424640 Zm00039ab424640_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab424640 Zm00039ab424640_P002 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab424640 Zm00039ab424640_P003 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab424640 Zm00039ab424640_P004 expected PWY-5287 sanguinarine and macarpine biosynthesis RETICULINE-OXIDASE-RXN EC-1.21.3.3 Zm00039ab424750 Zm00039ab424750_P001 conditional PWY-5097 L-lysine biosynthesis VI ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab424870 Zm00039ab424870_P001 viridiplantae HOMOSERSYN-PWY L-homoserine biosynthesis ASPARTATEKIN-RXN EC-2.7.2.4 Zm00039ab424870 Zm00039ab424870_P001 viridiplantae PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab425200 Zm00039ab425200_P002 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab425200 Zm00039ab425200_P002 conditional PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P001 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P001 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P001 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P001 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P001 NA PWY-1121 suberin monomers biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P002 expected PWY-6039 chlorogenic acid biosynthesis I CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P002 conditional PWY-361 phenylpropanoid biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P002 conditional PWY-6792 scopoletin biosynthesis CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P002 conditional PWY-7398 coumarins biosynthesis (engineered) CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN EC-2.1.1.104 Zm00039ab425210 Zm00039ab425210_P002 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab425400 Zm00039ab425400_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 2.7.1.134-RXN EC-2.7.1.134 Zm00039ab425580 Zm00039ab425580_P001 expected PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab425580 Zm00039ab425580_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) 2.7.1.139-RXN EC-2.7.1.159 Zm00039ab425580 Zm00039ab425580_P001 NA PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab425600 Zm00039ab425600_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab425600 Zm00039ab425600_P001 conditional PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab425670 Zm00039ab425670_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab425670 Zm00039ab425670_P002 expected PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00039ab425800 Zm00039ab425800_P001 conditional PWY-6030 serotonin and melatonin biosynthesis RXN3DJ-170 EC-4.1.1.28 Zm00039ab425810 Zm00039ab425810_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab425820 Zm00039ab425820_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab425830 Zm00039ab425830_P001 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab425830 Zm00039ab425830_P002 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab425830 Zm00039ab425830_P003 conditional PWY-6275 β-caryophyllene biosynthesis RXN-8414 EC-4.2.3.57 Zm00039ab425830 Zm00039ab425830_P004 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab426220 Zm00039ab426220_P001 viridiplantae PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab426280 Zm00039ab426280_P001 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab426280 Zm00039ab426280_P002 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab426280 Zm00039ab426280_P004 conditional PWY-7101 5-deoxystrigol biosynthesis RXN-13641 EC-5.2.1.14 Zm00039ab426280 Zm00039ab426280_P005 conditional PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P002 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P003 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P004 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab426310 Zm00039ab426310_P005 NA PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426440 Zm00039ab426440_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426440 Zm00039ab426440_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426440 Zm00039ab426440_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426460 Zm00039ab426460_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426460 Zm00039ab426460_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426460 Zm00039ab426460_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426490 Zm00039ab426490_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426490 Zm00039ab426490_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426490 Zm00039ab426490_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426500 Zm00039ab426500_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426500 Zm00039ab426500_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426500 Zm00039ab426500_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426540 Zm00039ab426540_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426540 Zm00039ab426540_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426540 Zm00039ab426540_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426550 Zm00039ab426550_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426550 Zm00039ab426550_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426550 Zm00039ab426550_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426560 Zm00039ab426560_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426560 Zm00039ab426560_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426560 Zm00039ab426560_P001 conditional PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab426570 Zm00039ab426570_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426570 Zm00039ab426570_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab426570 Zm00039ab426570_P001 conditional SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P001 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P001 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P001 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P001 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P002 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P002 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P002 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P002 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P002 ubiquitous SAM-PWY S-adenosyl-L-methionine biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P003 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P003 conditional PWY-5041 S-adenosyl-L-methionine cycle II S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P003 viridiplantae ETHYL-PWY ethylene biosynthesis I (plants) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P003 ubiquitous METHIONINE-DEG1-PWY L-methionine degradation I (to L-homocysteine) S-ADENMETSYN-RXN EC-2.5.1.6 Zm00039ab426580 Zm00039ab426580_P003 ubiquitous TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab426690 Zm00039ab426690_P001 viridiplantae TRIGLSYN-PWY diacylglycerol and triacylglycerol biosynthesis DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN EC-2.3.1.20 Zm00039ab426690 Zm00039ab426690_P002 viridiplantae PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab426730 Zm00039ab426730_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab426730 Zm00039ab426730_P001 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab426730 Zm00039ab426730_P002 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab426730 Zm00039ab426730_P002 NA PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) RXN-9311 EC-3.1.2.28 Zm00039ab426740 Zm00039ab426740_P001 NA PWY-5837 2-carboxy-1,4-naphthoquinol biosynthesis RXN-9311 EC-3.1.2.28 Zm00039ab426740 Zm00039ab426740_P001 NA PWY-5466 matairesinol biosynthesis RXN-8683 EC-1.23.1.3 Zm00039ab426960 Zm00039ab426960_P001 conditional SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab427020 Zm00039ab427020_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I RXN0-5114 EC-3.1.3.3 Zm00039ab427020 Zm00039ab427020_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab427040 Zm00039ab427040_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab427040 Zm00039ab427040_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427040 Zm00039ab427040_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427040 Zm00039ab427040_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427040 Zm00039ab427040_P001 NA PWY-561 superpathway of glyoxylate cycle and fatty acid degradation RXN-14971 EC-1.3.5.1 Zm00039ab427050 Zm00039ab427050_P001 NA PWY-5690 TCA cycle II (plants and fungi) RXN-14971 EC-1.3.5.1 Zm00039ab427050 Zm00039ab427050_P001 viridiplantae PWY-4302 aerobic respiration III (alternative oxidase pathway) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427050 Zm00039ab427050_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427050 Zm00039ab427050_P001 viridiplantae PWYQT-4481 TCA cycle variation V (plant) SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN EC-1.3.5.1 Zm00039ab427050 Zm00039ab427050_P001 NA PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab427190 Zm00039ab427190_P001 NA SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P001 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P001 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P002 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P002 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P003 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P003 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P004 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P004 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P005 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P005 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P006 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P006 conditional SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P007 viridiplantae PWY-7238 sucrose biosynthesis II SUCROSE-PHOSPHATASE-RXN EC-3.1.3.24 Zm00039ab427280 Zm00039ab427280_P007 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab427340 Zm00039ab427340_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab427340 Zm00039ab427340_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab427340 Zm00039ab427340_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab427340 Zm00039ab427340_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab427340 Zm00039ab427340_P005 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab427400 Zm00039ab427400_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab427400 Zm00039ab427400_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab427400 Zm00039ab427400_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427430 Zm00039ab427430_P001 ubiquitous PWY-6352 3-phosphoinositide biosynthesis 2.7.1.150-RXN EC-2.7.1.150 Zm00039ab427440 Zm00039ab427440_P001 expected ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427480 Zm00039ab427480_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427490 Zm00039ab427490_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427500 Zm00039ab427500_P001 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427500 Zm00039ab427500_P002 ubiquitous PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA 1.2.4.4-RXN EC-1.2.4.4 Zm00039ab427540 Zm00039ab427540_P001 viridiplantae PWY-1001 cellulose biosynthesis CELLULOSE-SYNTHASE-UDP-FORMING-RXN EC-2.4.1.12 Zm00039ab427550 Zm00039ab427550_P001 viridiplantae PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab427590 Zm00039ab427590_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427600 Zm00039ab427600_P002 ubiquitous ETHYL-PWY ethylene biosynthesis I (plants) ETHYL-RXN EC-1.14.17.4 Zm00039ab427600 Zm00039ab427600_P004 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab427850 Zm00039ab427850_P001 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab427850 Zm00039ab427850_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab427850 Zm00039ab427850_P002 conditional PWY-4441 DIMBOA-glucoside activation RXN-7082 EC-3.2.1.182 Zm00039ab427850 Zm00039ab427850_P002 conditional PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab427980 Zm00039ab427980_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab427980 Zm00039ab427980_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab427980 Zm00039ab427980_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab428000 Zm00039ab428000_P001 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab428000 Zm00039ab428000_P002 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab428000 Zm00039ab428000_P003 NA PWY-8011 L-serine biosynthesis II HYDROXYPYRUVATE-REDUCTASE-RXN EC-1.1.1.81 Zm00039ab428000 Zm00039ab428000_P004 NA ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P001 expected ARGASEDEG-PWY L-arginine degradation I (arginase pathway) ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 ubiquitous PWY-4984 urea cycle ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 expected ARG-PRO-PWY L-arginine degradation VI (arginase 2 pathway) ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 conditional PWY-6922 L-Nδ-acetylornithine biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 conditional PWY-6305 putrescine biosynthesis IV ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 conditional CITRULBIO-PWY L-citrulline biosynthesis ARGINASE-RXN EC-3.5.3.1 Zm00039ab428010 Zm00039ab428010_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P001 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P001 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P002 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P002 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P003 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P003 expected PWY-5687 pyrimidine ribonucleotides interconversion RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P004 NA PWY-7205 CMP phosphorylation RXN-11832 EC-2.7.4.14 Zm00039ab428080 Zm00039ab428080_P004 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab428300 Zm00039ab428300_P001 expected PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab428300 Zm00039ab428300_P002 expected CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab428590 Zm00039ab428590_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab428590 Zm00039ab428590_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab428590 Zm00039ab428590_P001 conditional PWY-4261 glycerol degradation I RXN-15745 EC-1.1.5.3 Zm00039ab428610 Zm00039ab428610_P001 viridiplantae PWY-6952 glycerophosphodiester degradation RXN-15745 EC-1.1.5.3 Zm00039ab428610 Zm00039ab428610_P001 conditional PWY-6118 glycerol-3-phosphate shuttle RXN-15745 EC-1.1.5.3 Zm00039ab428610 Zm00039ab428610_P001 expected RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00039ab428670 Zm00039ab428670_P001 viridiplantae PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab428830 Zm00039ab428830_P001 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab428830 Zm00039ab428830_P001 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab428830 Zm00039ab428830_P002 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab428830 Zm00039ab428830_P002 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab428830 Zm00039ab428830_P003 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab428830 Zm00039ab428830_P003 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab428830 Zm00039ab428830_P004 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab428830 Zm00039ab428830_P004 expected PWY0-1264 biotin-carboxyl carrier protein assembly BIOTIN-CARBOXYL-RXN EC-6.3.4.14 Zm00039ab428830 Zm00039ab428830_P005 viridiplantae PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ACETYL-COA-CARBOXYLTRANSFER-RXN EC-6.4.1.2 Zm00039ab428830 Zm00039ab428830_P005 expected PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab428910 Zm00039ab428910_P001 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab428910 Zm00039ab428910_P001 ubiquitous PWY-581 indole-3-acetate biosynthesis II RXNDQC-2 EC-1.14.13.168 Zm00039ab428910 Zm00039ab428910_P002 conditional PWYDQC-4 indole-3-acetate biosynthesis I RXNDQC-2 EC-1.14.13.168 Zm00039ab428910 Zm00039ab428910_P002 ubiquitous MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab428970 Zm00039ab428970_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab428970 Zm00039ab428970_P002 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab428990 Zm00039ab428990_P001 viridiplantae OXIDATIVEPENT-PWY pentose phosphate pathway (oxidative branch) I GLU6PDEHYDROG-RXN EC-1.1.1.49 Zm00039ab428990 Zm00039ab428990_P002 viridiplantae PWY-6959 L-ascorbate degradation V RXN-12440 EC-1.11.1.11 Zm00039ab429360 Zm00039ab429360_P001 viridiplantae PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab429440 Zm00039ab429440_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab429650 Zm00039ab429650_P001 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab429650 Zm00039ab429650_P002 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab429650 Zm00039ab429650_P003 conditional PWY-5350 thiosulfate disproportionation IV (rhodanese) THIOSULFATE-SULFURTRANSFERASE-RXN EC-2.8.1.1 Zm00039ab429650 Zm00039ab429650_P004 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab429670 Zm00039ab429670_P001 conditional PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.8-RXN EC-3.2.1.8 Zm00039ab429670 Zm00039ab429670_P002 conditional PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation I R147-RXN EC-1.13.11.54 Zm00039ab429800 Zm00039ab429800_P001 ubiquitous PWYQT-4445 pyrimidine salvage pathway URKI-RXN EC-2.7.1.48 Zm00039ab429890 Zm00039ab429890_P001 NA PWY-7193 pyrimidine ribonucleosides salvage I URIDINEKIN-RXN EC-2.7.1.48 Zm00039ab429890 Zm00039ab429890_P001 expected PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P001 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P001 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P001 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P002 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P002 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P002 conditional PWY-7036 very long chain fatty acid biosynthesis II RXN-13298 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P003 expected PWY-5080 very long chain fatty acid biosynthesis I RXN-7698 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P003 viridiplantae PWY-7601 arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) RXN-16095 EC-1.1.1.330 Zm00039ab429930 Zm00039ab429930_P003 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab430080 Zm00039ab430080_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) RXN-7903 EC-1.14.19.2 Zm00039ab430220 Zm00039ab430220_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-8389 EC-1.14.19.2 Zm00039ab430220 Zm00039ab430220_P001 conditional PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab430400 Zm00039ab430400_P001 expected PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab430400 Zm00039ab430400_P002 expected PWY-5973 cis-vaccenate biosynthesis RXN-9556 EC-1.1.1.100 Zm00039ab430440 Zm00039ab430440_P001 conditional PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab430750 Zm00039ab430750_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab430750 Zm00039ab430750_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA 2OXOGLUTDECARB-RXN EC-1.2.4.2 Zm00039ab430750 Zm00039ab430750_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.142-RXN EC-2.4.1.142 Zm00039ab430840 Zm00039ab430840_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00039ab430850 Zm00039ab430850_P001 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00039ab430850 Zm00039ab430850_P002 viridiplantae PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA RXN0-1147 EC-2.3.1.61 Zm00039ab430850 Zm00039ab430850_P003 viridiplantae GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431050 Zm00039ab431050_P001 conditional GLUCONEO-PWY gluconeogenesis I 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 viridiplantae PWY-5723 Rubisco shunt 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 viridiplantae PWY66-399 gluconeogenesis III 2PGADEHYDRAT-RXN EC-4.2.1.11 Zm00039ab431150 Zm00039ab431150_P001 conditional PWY-7120 esterified suberin biosynthesis RXN-10749 EC-2.3.1.188 Zm00039ab431230 Zm00039ab431230_P001 conditional PWY-3462 L-phenylalanine biosynthesis II CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN EC-4.2.1.91 Zm00039ab431340 Zm00039ab431340_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab431380 Zm00039ab431380_P001 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab431380 Zm00039ab431380_P002 viridiplantae PWY-622 starch biosynthesis RXN-14372 EC-2.4.1.18 Zm00039ab431380 Zm00039ab431380_P003 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab431410 Zm00039ab431410_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab431410 Zm00039ab431410_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab431520 Zm00039ab431520_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab431530 Zm00039ab431530_P001 viridiplantae PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab431590 Zm00039ab431590_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab431720 Zm00039ab431720_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab431720 Zm00039ab431720_P002 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab431830 Zm00039ab431830_P001 viridiplantae PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) GALACTONOLACTONE-DEHYDROGENASE-RXN EC-1.3.2.3 Zm00039ab431830 Zm00039ab431830_P002 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab431840 Zm00039ab431840_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab431840 Zm00039ab431840_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab431840 Zm00039ab431840_P001 conditional PWY-735 jasmonic acid biosynthesis RXN1F-19 EC-4.2.1.92 Zm00039ab431880 Zm00039ab431880_P001 viridiplantae PWY-5407 9-lipoxygenase and 9-allene oxide synthase pathway RXN-8499 EC-4.2.1.92 Zm00039ab431880 Zm00039ab431880_P001 conditional PWY3O-4107 NAD salvage pathway V (PNC V cycle) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab431980 Zm00039ab431980_P001 NA PWY-5381 pyridine nucleotide cycling (plants) NICOTINATEPRIBOSYLTRANS-RXN EC-6.3.4.21 Zm00039ab431980 Zm00039ab431980_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432240 Zm00039ab432240_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab432260 Zm00039ab432260_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab432260 Zm00039ab432260_P002 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab432260 Zm00039ab432260_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432280 Zm00039ab432280_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432280 Zm00039ab432280_P002 viridiplantae PWY-401 galactolipid biosynthesis I RXN-1225 EC-2.4.1.241 Zm00039ab432380 Zm00039ab432380_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432450 Zm00039ab432450_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432450 Zm00039ab432450_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432450 Zm00039ab432450_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432450 Zm00039ab432450_P004 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432460 Zm00039ab432460_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab432460 Zm00039ab432460_P002 viridiplantae PWY-5410 traumatin and (Z)-3-hexen-1-yl acetate biosynthesis LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab432810 Zm00039ab432810_P001 conditional PWY-735 jasmonic acid biosynthesis RXN-1321 EC-1.13.11.12 Zm00039ab432810 Zm00039ab432810_P001 viridiplantae PWY-5409 divinyl ether biosynthesis II LIPOXYGENASE-RXN EC-1.13.11.12 Zm00039ab432810 Zm00039ab432810_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab432840 Zm00039ab432840_P001 conditional PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis 1.1.1.285-RXN EC-1.1.1.285 Zm00039ab432840 Zm00039ab432840_P002 conditional PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab432880 Zm00039ab432880_P001 viridiplantae PWY-4041 γ-glutamyl cycle GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN EC-4.3.2.9 Zm00039ab432880 Zm00039ab432880_P002 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) RXN-11341 EC-1.14.19.17 Zm00039ab432900 Zm00039ab432900_P001 viridiplantae PWY0A-6303 methyl indole-3-acetate interconversion RXN0A-10711 EC-3.1.1.1 Zm00039ab432960 Zm00039ab432960_P001 NA PWY18C3-24 methylsalicylate degradation RXNQT-4366 EC-3.1.1.1 Zm00039ab432960 Zm00039ab432960_P001 NA PWY-6303 methyl indole-3-acetate interconversion RXN-10711 EC-3.1.1.1 Zm00039ab432960 Zm00039ab432960_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab433430 Zm00039ab433430_P001 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab433430 Zm00039ab433430_P002 expected PWY-6317 D-galactose degradation I (Leloir pathway) ALDOSE1EPIM-RXN EC-5.1.3.3 Zm00039ab433430 Zm00039ab433430_P003 expected GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433520 Zm00039ab433520_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab433520 Zm00039ab433520_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433600 Zm00039ab433600_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab433670 Zm00039ab433670_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle 1.2.1.13-RXN EC-1.2.1.13 Zm00039ab433680 Zm00039ab433680_P001 viridiplantae GLUCONEO-PWY gluconeogenesis I GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 viridiplantae SUCSYN-PWY sucrose biosynthesis I (from photosynthesis) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 viridiplantae PWY66-399 gluconeogenesis III GAPOXNPHOSPHN-RXN EC-1.2.1.12 Zm00039ab433700 Zm00039ab433700_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab433760 Zm00039ab433760_P001 expected TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab433880 Zm00039ab433880_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis ANTHRANSYN-RXN EC-4.1.3.27 Zm00039ab433880 Zm00039ab433880_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab433900 Zm00039ab433900_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab433900 Zm00039ab433900_P002 viridiplantae PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab433910 Zm00039ab433910_P001 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab433910 Zm00039ab433910_P002 expected PWY1F-353 glycine betaine biosynthesis III (plants) BADH-RXN EC-1.2.1.8 Zm00039ab433910 Zm00039ab433910_P003 expected PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab433960 Zm00039ab433960_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab433960 Zm00039ab433960_P001 ubiquitous PWY-3385 choline biosynthesis I ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab433990 Zm00039ab433990_P001 conditional PWY4FS-6 phosphatidylethanolamine biosynthesis II ETHANOLAMINE-KINASE-RXN EC-2.7.1.82 Zm00039ab433990 Zm00039ab433990_P001 ubiquitous PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P001 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P002 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P003 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P004 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P005 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P006 viridiplantae PWY-43 putrescine biosynthesis II AGMATINE-DEIMINASE-RXN EC-3.5.3.12 Zm00039ab434030 Zm00039ab434030_P007 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab434090 Zm00039ab434090_P001 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab434090 Zm00039ab434090_P002 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab434090 Zm00039ab434090_P003 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab434090 Zm00039ab434090_P004 viridiplantae TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab434090 Zm00039ab434090_P005 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab434140 Zm00039ab434140_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P002 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P003 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P004 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P005 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P006 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P007 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab434150 Zm00039ab434150_P008 viridiplantae PWY-1042 glycolysis IV (plant cytosol) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab434170 Zm00039ab434170_P001 viridiplantae PWY-5484 glycolysis II (from fructose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab434170 Zm00039ab434170_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) 6PFRUCTPHOS-RXN EC-2.7.1.11 Zm00039ab434170 Zm00039ab434170_P001 viridiplantae PWY-6952 glycerophosphodiester degradation GLYCPDIESTER-RXN EC-3.1.4.46 Zm00039ab434300 Zm00039ab434300_P001 conditional PWY-361 phenylpropanoid biosynthesis RXN-1101 EC-1.2.1.44 Zm00039ab434390 Zm00039ab434390_P001 conditional PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P001 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P001 NA PWY-5690 TCA cycle II (plants and fungi) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P002 conditional PWYQT-4481 TCA cycle variation V (plant) ISOCITRATE-DEHYDROGENASE-NAD+-RXN EC-1.1.1.286 Zm00039ab434530 Zm00039ab434530_P002 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab434580 Zm00039ab434580_P001 viridiplantae PWY-282 cuticular wax biosynthesis RXNQT-4193 EC-2.3.1.75 Zm00039ab434620 Zm00039ab434620_P001 ubiquitous PWY-5884 wax esters biosynthesis I 2.3.1.75-RXN EC-2.3.1.75 Zm00039ab434620 Zm00039ab434620_P001 conditional PWY-6012 acyl carrier protein metabolism HOLO-ACP-SYNTH-RXN EC-2.7.8.7 Zm00039ab434720 Zm00039ab434720_P001 viridiplantae PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation DCTP-PYROPHOSPHATASE-RXN EC-3.6.1.9 Zm00039ab435010 Zm00039ab435010_P001 expected PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab435050 Zm00039ab435050_P001 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab435050 Zm00039ab435050_P002 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab435050 Zm00039ab435050_P003 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab435050 Zm00039ab435050_P004 ubiquitous PWY-181 photorespiration GPH-RXN EC-3.1.3.18 Zm00039ab435050 Zm00039ab435050_P005 ubiquitous PWY-6902 chitin degradation II (Vibrio) 3.2.1.14-RXN EC-3.2.1.14 Zm00039ab435110 Zm00039ab435110_P001 expected ARGSPECAT-PWY spermine biosynthesis SAMDECARB-RXN EC-4.1.1.50 Zm00039ab435310 Zm00039ab435310_P001 conditional BSUBPOLYAMSYN-PWY spermidine biosynthesis I SAMDECARB-RXN EC-4.1.1.50 Zm00039ab435310 Zm00039ab435310_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab435320 Zm00039ab435320_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab435320 Zm00039ab435320_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab435320 Zm00039ab435320_P001 conditional PWY-5027 phylloquinol biosynthesis RXN-7569 EC-2.1.1.329 Zm00039ab435680 Zm00039ab435680_P001 viridiplantae PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00039ab435690 Zm00039ab435690_P001 expected PWY-7546 diphthamide biosynthesis II (eukaryotes) RXN-15776 EC-3.1.1.97 Zm00039ab435690 Zm00039ab435690_P002 expected PWY-321 cutin biosynthesis RXN-1064 EC-1.11.2.3 Zm00039ab435820 Zm00039ab435820_P001 ubiquitous PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435950 Zm00039ab435950_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435950 Zm00039ab435950_P002 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435950 Zm00039ab435950_P003 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435950 Zm00039ab435950_P004 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435950 Zm00039ab435950_P005 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435960 Zm00039ab435960_P001 conditional PWY-5176 coumarin biosynthesis (via 2-coumarate) RXN-8036 EC-3.2.1.21 Zm00039ab435960 Zm00039ab435960_P002 conditional GLYSYN2-PWY glycine biosynthesis THREONINE-ALDOLASE-RXN EC-4.1.2.48 Zm00039ab436050 Zm00039ab436050_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab436150 Zm00039ab436150_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab436150 Zm00039ab436150_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab436150 Zm00039ab436150_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab436150 Zm00039ab436150_P004 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P001 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P002 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P003 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P004 expected PWY-621 sucrose degradation III (sucrose invertase) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 viridiplantae GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 conditional PWY-7238 sucrose biosynthesis II GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 conditional PWY-5661 GDP-glucose biosynthesis GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 conditional PWY0-1182 trehalose degradation II (cytosolic) GLUCOKIN-RXN EC-2.7.1.1 Zm00039ab436310 Zm00039ab436310_P005 expected PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab436580 Zm00039ab436580_P001 expected PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab436790 Zm00039ab436790_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-REDUCT-NADPH-RXN EC-1.8.1.7 Zm00039ab437000 Zm00039ab437000_P001 viridiplantae THIOREDOX-PWY thioredoxin pathway THIOREDOXIN-REDUCT-NADPH-RXN EC-1.8.1.9 Zm00039ab437000 Zm00039ab437000_P001 viridiplantae PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P001 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P001 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P002 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P002 conditional PWY-5129 sphingolipid biosynthesis (plants) SPHINGANINE-KINASE-RXN EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P003 viridiplantae PWY-6483 ceramide degradation RXN-11376 EC-2.7.1.91 Zm00039ab437010 Zm00039ab437010_P003 conditional GLUTAMATE-SYN2-PWY L-glutamate biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab437210 Zm00039ab437210_P001 expected ARGININE-SYN4-PWY L-ornithine biosynthesis II GLUTAMATE-DEHYDROGENASE-NADP+-RXN EC-1.4.1.3 Zm00039ab437210 Zm00039ab437210_P001 expected PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab437380 Zm00039ab437380_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab437380 Zm00039ab437380_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab437380 Zm00039ab437380_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab437380 Zm00039ab437380_P001 conditional PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab437390 Zm00039ab437390_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab437390 Zm00039ab437390_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab437390 Zm00039ab437390_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab437390 Zm00039ab437390_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab437600 Zm00039ab437600_P001 conditional ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab438030 Zm00039ab438030_P001 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab438030 Zm00039ab438030_P001 NA ETHYL-PWY ethylene biosynthesis I (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab438030 Zm00039ab438030_P002 ubiquitous PWY-7270 L-methionine salvage cycle II (plants) 4.4.1.14-RXN EC-4.4.1.14 Zm00039ab438030 Zm00039ab438030_P002 NA PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P001 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P001 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P001 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P001 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab438770 Zm00039ab438770_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P002 expected PWY-321 cutin biosynthesis RXN-9666 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P002 ubiquitous PWY-5148 acyl-CoA hydrolysis THIOESTER-RXN EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-9627 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P002 conditional PWY-6465 ω-hydroxylation of caprate and laurate RXN-9628 EC-3.1.2.2 Zm00039ab438770 Zm00039ab438770_P002 NA PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab438770 Zm00039ab438770_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab438840 Zm00039ab438840_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab438840 Zm00039ab438840_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) RIBOPHOSPHAT-RXN EC-3.1.3.104 Zm00039ab438840 Zm00039ab438840_P003 viridiplantae PWY-3301 sinapate ester biosynthesis SINAPINE-ESTERASE-RXN EC-3.1.1.49 Zm00039ab438870 Zm00039ab438870_P001 conditional DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab438880 Zm00039ab438880_P001 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab438880 Zm00039ab438880_P001 viridiplantae PWY-4081 glutathione-peroxide redox reactions 1.11.1.12-RXN EC-1.11.1.12 Zm00039ab438880 Zm00039ab438880_P002 viridiplantae DETOX1-PWY-1 reactive oxygen species degradation GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab438880 Zm00039ab438880_P002 expected PWY-4081 glutathione-peroxide redox reactions GLUTATHIONE-PEROXIDASE-RXN EC-1.11.1.9 Zm00039ab438880 Zm00039ab438880_P002 viridiplantae PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab439330 Zm00039ab439330_P001 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P001 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P001 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P001 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab439330 Zm00039ab439330_P002 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P002 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P002 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P002 manual PWY66-399 gluconeogenesis III 4.1.1.32-RXN EC-4.1.1.32 Zm00039ab439330 Zm00039ab439330_P003 conditional GLUCONEO-PWY gluconeogenesis I PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P003 viridiplantae PWY-561 superpathway of glyoxylate cycle and fatty acid degradation PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P003 NA PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type PEPCARBOXYKIN-RXN EC-4.1.1.49 Zm00039ab439330 Zm00039ab439330_P003 manual PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P001 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P001 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P002 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P002 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P003 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P003 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P004 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P004 viridiplantae PWY-7436 vitamin E biosynthesis (tocotrienols) RXN-14919 EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P005 conditional PWY-1422 vitamin E biosynthesis (tocopherols) TOCOPHEROL-O-METHYLTRANSFERASE-RXN EC-2.1.1.95 Zm00039ab439480 Zm00039ab439480_P005 viridiplantae PWY-6801 volatile esters biosynthesis (during fruit ripening) RXN-12362 EC-2.3.1.84 Zm00039ab440020 Zm00039ab440020_P001 conditional CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN0-1461 EC-1.3.3.3 Zm00039ab440090 Zm00039ab440090_P001 viridiplantae HEME-BIOSYNTHESIS-II heme b biosynthesis I (aerobic) RXN0-1461 EC-1.3.3.3 Zm00039ab440090 Zm00039ab440090_P001 viridiplantae UDPNACETYLGALSYN-PWY UDP-N-acetyl-D-glucosamine biosynthesis II NAG1P-URIDYLTRANS-RXN EC-2.7.7.23 Zm00039ab440200 Zm00039ab440200_P001 viridiplantae PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P001 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P001 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P002 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P002 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P003 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P003 conditional PWY-5138 unsaturated, even numbered fatty acid β-oxidation RXN-7835 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P004 viridiplantae PWY-6837 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) RXN-12521 EC-1.3.1.34 Zm00039ab440250 Zm00039ab440250_P004 conditional PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440260 Zm00039ab440260_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440260 Zm00039ab440260_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440260 Zm00039ab440260_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440260 Zm00039ab440260_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440270 Zm00039ab440270_P001 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440270 Zm00039ab440270_P001 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440270 Zm00039ab440270_P001 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440270 Zm00039ab440270_P001 expected PWY-6535 4-aminobutanoate degradation I GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440270 Zm00039ab440270_P002 expected PWY-4321 L-glutamate degradation IV GABATRANSAM-RXN EC-2.6.1.19 Zm00039ab440270 Zm00039ab440270_P002 expected PWY-6473 4-aminobutanoate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440270 Zm00039ab440270_P002 viridiplantae PWY-4321 L-glutamate degradation IV RXN-6902 EC-2.6.1.96 Zm00039ab440270 Zm00039ab440270_P002 expected PWY-6949 DIBOA-glucoside biosynthesis RXN-7021 EC-2.4.1.202 Zm00039ab440360 Zm00039ab440360_P001 conditional TRPSYN-PWY L-tryptophan biosynthesis IGPSYN-RXN EC-4.1.1.48 Zm00039ab440460 Zm00039ab440460_P001 viridiplantae PWY-63 UDP-β-L-arabinose biosynthesis I (from UDP-α-D-xylose) UDP-ARABINOSE-4-EPIMERASE-RXN EC-5.1.3.5 Zm00039ab440490 Zm00039ab440490_P001 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab440650 Zm00039ab440650_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab440650 Zm00039ab440650_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab440650 Zm00039ab440650_P003 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab440650 Zm00039ab440650_P004 expected PWY-622 starch biosynthesis GLYCOGENSYN-RXN EC-2.4.1.21 Zm00039ab440700 Zm00039ab440700_P001 viridiplantae PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab440760 Zm00039ab440760_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab440820 Zm00039ab440820_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab440880 Zm00039ab440880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab440880 Zm00039ab440880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab440880 Zm00039ab440880_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P002 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P002 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P003 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P003 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P004 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441040 Zm00039ab441040_P004 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-600 EC-1.1.1.219 Zm00039ab441050 Zm00039ab441050_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7784 EC-1.1.1.219 Zm00039ab441050 Zm00039ab441050_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441050 Zm00039ab441050_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441050 Zm00039ab441050_P001 conditional PWY-7253 apigeninidin 5-O-glucoside biosynthesis RXN-14425 EC-1.1.1.234 Zm00039ab441060 Zm00039ab441060_P001 conditional PWY-7252 luteolinidin 5-O-glucoside biosynthesis RXN-14422 EC-1.1.1.234 Zm00039ab441060 Zm00039ab441060_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab441170 Zm00039ab441170_P001 conditional PWY-5469 sesamin biosynthesis RXN-17351 EC-1.10.3.2 Zm00039ab441170 Zm00039ab441170_P001 conditional PWY-1061 homogalacturonan biosynthesis 2.4.1.43-RXN EC-2.4.1.43 Zm00039ab441220 Zm00039ab441220_P001 expected PWY-4821 UDP-α-D-xylose biosynthesis UDP-GLUCURONATE-DECARBOXYLASE-RXN EC-4.1.1.35 Zm00039ab441270 Zm00039ab441270_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P001 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P002 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P003 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P004 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P005 viridiplantae PWY-5188 tetrapyrrole biosynthesis I (from glutamate) GLUTRNAREDUCT-RXN EC-1.2.1.70 Zm00039ab441300 Zm00039ab441300_P006 viridiplantae PWY-6717 (1,4)-β-D-xylan degradation 3.2.1.37-RXN EC-3.2.1.37 Zm00039ab441340 Zm00039ab441340_P001 conditional PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab441470 Zm00039ab441470_P001 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab441470 Zm00039ab441470_P002 viridiplantae PWY-4381 fatty acid biosynthesis initiation I 2.3.1.180-RXN EC-2.3.1.180 Zm00039ab441470 Zm00039ab441470_P003 viridiplantae PWY1F-FLAVSYN flavonoid biosynthesis NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab441480 Zm00039ab441480_P001 conditional PWY-6787 flavonoid biosynthesis (in equisetum) NARINGENIN-3-DIOXYGENASE-RXN EC-1.14.11.9 Zm00039ab441480 Zm00039ab441480_P001 conditional PWY1F-823 leucopelargonidin and leucocyanidin biosynthesis RXN-7775 EC-1.14.11.9 Zm00039ab441480 Zm00039ab441480_P001 conditional PWY-5152 leucodelphinidin biosynthesis RXN-7922 EC-1.14.11.9 Zm00039ab441480 Zm00039ab441480_P001 conditional PWY-5800 xylan biosynthesis RXN-9104 EC-2.4.2.24 Zm00039ab441730 Zm00039ab441730_P001 expected PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab441850 Zm00039ab441850_P001 conditional SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab441860 Zm00039ab441860_P001 viridiplantae SERSYN-PWY L-serine biosynthesis I PGLYCDEHYDROG-RXN EC-1.1.1.95 Zm00039ab441860 Zm00039ab441860_P002 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00039ab441890 Zm00039ab441890_P001 viridiplantae RIBOSYN2-PWY flavin biosynthesis I (bacteria and plants) LUMAZINESYN-RXN EC-2.5.1.78 Zm00039ab441890 Zm00039ab441890_P002 viridiplantae PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P001 NA PWY-381 nitrate reduction II (assimilatory) GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 viridiplantae PWY-6963 ammonia assimilation cycle I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 viridiplantae PWY-6964 ammonia assimilation cycle II GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 viridiplantae GLNSYN-PWY L-glutamine biosynthesis I GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 viridiplantae PWY-6549 L-glutamine biosynthesis III GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 conditional PWY-7060 ornithine-citrulline shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 NA PWY-7061 glutamate-glutamine shuttle GLUTAMINESYN-RXN EC-6.3.1.2 Zm00039ab442120 Zm00039ab442120_P002 NA PWY-5321 quercetin glycoside biosynthesis (Arabidopsis) RXN1F-462 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-5348 kaempferol triglucoside biosynthesis RXN1F-461 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-5320 kaempferol glycoside biosynthesis (Arabidopsis) RXN1F-461 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-7140 myricetin gentiobioside biosynthesis RXN-13822 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-5390 rutin biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-7137 quercetin gentiotetraside biosynthesis RXN1F-462 EC-2.4.1.91 Zm00039ab442210 Zm00039ab442210_P001 conditional PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab442210 Zm00039ab442210_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab442210 Zm00039ab442210_P002 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4723 EC-2.4.1.203 Zm00039ab442210 Zm00039ab442210_P003 expected PWY-2902 cytokinin-O-glucosides biosynthesis RXN-4735 EC-2.4.1.215 Zm00039ab442210 Zm00039ab442210_P003 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P001 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P001 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P001 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P001 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P001 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P002 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P002 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P002 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P002 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P002 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P003 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P003 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P003 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P003 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P003 expected PWY-6369 inositol diphosphates biosynthesis RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P004 conditional PWY-6554 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P004 expected PWY-4562 lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P004 NA PWY-4541 lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P004 NA PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) RXN-7163 EC-2.7.1.158 Zm00039ab442230 Zm00039ab442230_P004 expected PWY-6823 molybdenum cofactor biosynthesis RXN-8348 EC-2.10.1.1 Zm00039ab442240 Zm00039ab442240_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab442290 Zm00039ab442290_P001 conditional PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P001 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P001 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P002 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P002 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P003 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P003 NA PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P004 viridiplantae PWY-3742 tetrahydrofolate biosynthesis II GTP-CYCLOHYDRO-I-RXN EC-3.5.4.16 Zm00039ab442450 Zm00039ab442450_P004 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P001 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P001 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P001 NA PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) RXN-15066 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P002 conditional PWY-5995 linoleate biosynthesis I (plants) RXN-9670 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing 2.3.1.23-RXN EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P002 conditional PWY-7618 ricinoleate biosynthesis RXN-19425 EC-2.3.1.23 Zm00039ab442600 Zm00039ab442600_P002 NA PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P001 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P001 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P002 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P002 expected PWY-6352 3-phosphoinositide biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P003 expected PWY-6351 D-myo-inositol (1,4,5)-trisphosphate biosynthesis 1-PHOSPHATIDYLINOSITOL-KINASE-RXN EC-2.7.1.67 Zm00039ab442680 Zm00039ab442680_P003 expected PWY-5142 acyl-[acyl-carrier protein] thioesterase pathway RXN-7902 EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 viridiplantae PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-9548 EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 viridiplantae PWY-5147 oleate biosynthesis I (plants) 3.1.2.14-RXN EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 viridiplantae PWY-5973 cis-vaccenate biosynthesis RXN-9555 EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 conditional PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9549 EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 viridiplantae PWY-5366 palmitoleate biosynthesis II (plants and bacteria) RXN-9550 EC-3.1.2.14 Zm00039ab442740 Zm00039ab442740_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442750 Zm00039ab442750_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442750 Zm00039ab442750_P002 viridiplantae PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00039ab442770 Zm00039ab442770_P001 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00039ab442770 Zm00039ab442770_P002 ubiquitous PWY-6754 S-methyl-5'-thioadenosine degradation I 5-METHYLTHIORIBOSE-KINASE-RXN EC-2.7.1.100 Zm00039ab442770 Zm00039ab442770_P003 ubiquitous PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab442820 Zm00039ab442820_P001 expected PWY-5980 xylogalacturonan biosynthesis RXN-9589 EC-2.4.2.41 Zm00039ab442820 Zm00039ab442820_P002 expected PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab442850 Zm00039ab442850_P001 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab442850 Zm00039ab442850_P002 viridiplantae PWY-7219 adenosine ribonucleotides de novo biosynthesis ADENYL-KIN-RXN EC-2.7.4.3 Zm00039ab442850 Zm00039ab442850_P003 viridiplantae PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab442870 Zm00039ab442870_P001 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab442870 Zm00039ab442870_P002 expected PWY-6441 spermine and spermidine degradation III RXN-12089 EC-1.5.3.17 Zm00039ab442870 Zm00039ab442870_P003 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442930 Zm00039ab442930_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442930 Zm00039ab442930_P002 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442930 Zm00039ab442930_P003 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab442930 Zm00039ab442930_P004 viridiplantae CHLOROPHYLL-SYN 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) RXN1F-20 EC-6.6.1.1 Zm00039ab443040 Zm00039ab443040_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab443100 Zm00039ab443100_P001 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab443100 Zm00039ab443100_P002 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab443100 Zm00039ab443100_P003 viridiplantae MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab443100 Zm00039ab443100_P004 viridiplantae PWY-5686 UMP biosynthesis I DIHYDROOROTATE-DEHYDROGENASE-RXN EC-1.3.5.2 Zm00039ab443130 Zm00039ab443130_P001 viridiplantae PWY-1042 glycolysis IV (plant cytosol) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab443200 Zm00039ab443200_P001 viridiplantae PWY-5723 Rubisco shunt PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab443200 Zm00039ab443200_P001 conditional PWY-5484 glycolysis II (from fructose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab443200 Zm00039ab443200_P001 expected GLYCOLYSIS glycolysis I (from glucose 6-phosphate) PEPDEPHOS-RXN EC-2.7.1.40 Zm00039ab443200 Zm00039ab443200_P001 viridiplantae PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00039ab443320 Zm00039ab443320_P001 viridiplantae PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) ALLANTOINASE-RXN EC-3.5.2.5 Zm00039ab443320 Zm00039ab443320_P001 viridiplantae PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P001 NA PWY-1121 suberin monomers biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 expected PWY-5989 stearate biosynthesis II (bacteria and plants) RXN-16380 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 viridiplantae PWY-321 cutin biosynthesis RXN-16389 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 ubiquitous PWY-6733 sporopollenin precursors biosynthesis RXN-12184 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 conditional PWY-5147 oleate biosynthesis I (plants) RXN-9644 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 viridiplantae PWY-5971 palmitate biosynthesis II (bacteria and plants) RXN-9623 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 viridiplantae PWY-5143 long-chain fatty acid activation RXN-7904 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 viridiplantae PWY-6803 phosphatidylcholine acyl editing RXN-7904 EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 conditional PWY-6920 6-gingerol analog biosynthesis (engineered) R223-RXN EC-6.2.1.3 Zm00039ab443470 Zm00039ab443470_P002 NA PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00039ab443630 Zm00039ab443630_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00039ab443670 Zm00039ab443670_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00039ab443690 Zm00039ab443690_P001 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00039ab443690 Zm00039ab443690_P002 expected PWY-6502 oxidized GTP and dGTP detoxification RXN-11396 EC-3.6.1.55 Zm00039ab443740 Zm00039ab443740_P001 expected PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab443780 Zm00039ab443780_P001 viridiplantae PWY-7214 baicalein degradation (hydrogen peroxide detoxification) RXN-14240 EC-1.11.1.7 Zm00039ab443880 Zm00039ab443880_P001 conditional PWY-5466 matairesinol biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab443880 Zm00039ab443880_P001 conditional PWY-5469 sesamin biosynthesis RXN-17352 EC-1.11.1.7 Zm00039ab443880 Zm00039ab443880_P001 conditional PWY-7221 guanosine ribonucleotides de novo biosynthesis GMP-SYN-GLUT-RXN EC-6.3.5.2 Zm00039ab443900 Zm00039ab443900_P001 viridiplantae PWY-735 jasmonic acid biosynthesis RXN-10708 EC-3.1.2.20 Zm00039ab444070 Zm00039ab444070_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab444640 Zm00039ab444640_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab444760 Zm00039ab444760_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab444760 Zm00039ab444760_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab444770 Zm00039ab444770_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab444770 Zm00039ab444770_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444810 Zm00039ab444810_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444820 Zm00039ab444820_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444830 Zm00039ab444830_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444840 Zm00039ab444840_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444860 Zm00039ab444860_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab444960 Zm00039ab444960_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445100 Zm00039ab445100_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445100 Zm00039ab445100_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab445120 Zm00039ab445120_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab445150 Zm00039ab445150_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445230 Zm00039ab445230_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445260 Zm00039ab445260_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445260 Zm00039ab445260_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445270 Zm00039ab445270_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab445450 Zm00039ab445450_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445550 Zm00039ab445550_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445550 Zm00039ab445550_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445560 Zm00039ab445560_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445560 Zm00039ab445560_P001 conditional PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab445600 Zm00039ab445600_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445620 Zm00039ab445620_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445630 Zm00039ab445630_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445660 Zm00039ab445660_P001 viridiplantae PWY-621 sucrose degradation III (sucrose invertase) 3.2.1.48-RXN EC-3.2.1.26 Zm00039ab445680 Zm00039ab445680_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab445800 Zm00039ab445800_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab445800 Zm00039ab445800_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab445810 Zm00039ab445810_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab445810 Zm00039ab445810_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab445850 Zm00039ab445850_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab445850 Zm00039ab445850_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab445930 Zm00039ab445930_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab445930 Zm00039ab445930_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab445940 Zm00039ab445940_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab445940 Zm00039ab445940_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445970 Zm00039ab445970_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab445970 Zm00039ab445970_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab445990 Zm00039ab445990_P001 viridiplantae PWY-101 photosynthesis light reactions RXN-15479 EC-1.97.1.12 Zm00039ab446010 Zm00039ab446010_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab446150 Zm00039ab446150_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab446160 Zm00039ab446160_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab446450 Zm00039ab446450_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab446510 Zm00039ab446510_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab446530 Zm00039ab446530_P001 viridiplantae PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab446560 Zm00039ab446560_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab446610 Zm00039ab446610_P001 viridiplantae PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab446660 Zm00039ab446660_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab446660 Zm00039ab446660_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446670 Zm00039ab446670_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446670 Zm00039ab446670_P002 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446680 Zm00039ab446680_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446680 Zm00039ab446680_P002 conditional PWY-6348 phosphate acquisition ACID-PHOSPHATASE-RXN EC-3.1.3.2 Zm00039ab446710 Zm00039ab446710_P001 expected PWY-5083 NAD/NADH phosphorylation and dephosphorylation RXN-5822 EC-3.1.3.2 Zm00039ab446710 Zm00039ab446710_P001 viridiplantae PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446720 Zm00039ab446720_P001 conditional PWY-5936 xyloglucan biosynthesis RXN-9461 EC-2.4.2.39 Zm00039ab446730 Zm00039ab446730_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab446930 Zm00039ab446930_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab446930 Zm00039ab446930_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab446930 Zm00039ab446930_P001 conditional PWY-101 photosynthesis light reactions PSII-RXN EC-1.10.3.9 Zm00039ab447130 Zm00039ab447130_P001 viridiplantae PWY-6424 26,27-dehydrozymosterol metabolism RXN-11201 EC-2.1.1.43 Zm00039ab447140 Zm00039ab447140_P001 NA PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab447190 Zm00039ab447190_P001 viridiplantae PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab447530 Zm00039ab447530_P001 viridiplantae PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab447660 Zm00039ab447660_P001 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab447660 Zm00039ab447660_P001 conditional PWY-622 starch biosynthesis RXN-14380 EC-3.2.1.68 Zm00039ab447660 Zm00039ab447660_P002 viridiplantae PWY-6724 starch degradation II RXN-12280 EC-3.2.1.68 Zm00039ab447660 Zm00039ab447660_P002 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448110 Zm00039ab448110_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448120 Zm00039ab448120_P001 conditional PWY-3801 sucrose degradation II (sucrose synthase) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 expected PWY-622 starch biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 viridiplantae PWY-7343 UDP-α-D-glucose biosynthesis I PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 expected PWYQT-4466 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 NA GLUCOSE1PMETAB-PWY glucose and glucose-1-phosphate degradation PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 conditional PWY-6317 D-galactose degradation I (Leloir pathway) PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 expected PWY-7238 sucrose biosynthesis II PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 conditional PWY-5661 GDP-glucose biosynthesis PHOSPHOGLUCMUT-RXN EC-5.4.2.2 Zm00039ab448130 Zm00039ab448130_P001 conditional MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS protein N-glycosylation initial phase (eukaryotic) 2.4.1.119-RXN EC-2.4.99.18 Zm00039ab448310 Zm00039ab448310_P001 viridiplantae CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448350 Zm00039ab448350_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448350 Zm00039ab448350_P001 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448350 Zm00039ab448350_P002 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448350 Zm00039ab448350_P002 conditional CALVIN-PWY Calvin-Benson-Bassham cycle RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448370 Zm00039ab448370_P001 viridiplantae PWY-5723 Rubisco shunt RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN EC-4.1.1.39 Zm00039ab448370 Zm00039ab448370_P001 conditional PWY-3781 aerobic respiration I (cytochrome c) CYTOCHROME-C-OXIDASE-RXN EC-1.9.3.1 Zm00039ab448450 Zm00039ab448450_P001 viridiplantae CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab448480 Zm00039ab448480_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab448480 Zm00039ab448480_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab448480 Zm00039ab448480_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab448490 Zm00039ab448490_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab448490 Zm00039ab448490_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab448490 Zm00039ab448490_P001 conditional CAMALEXIN-SYN camalexin biosynthesis RXN-11663 EC-2.5.1.18 Zm00039ab448530 Zm00039ab448530_P001 conditional PWY-6842 glutathione-mediated detoxification II GSHTRAN-RXN EC-2.5.1.18 Zm00039ab448530 Zm00039ab448530_P001 conditional PWYQT-4477 indole glucosinolate activation (intact plant cell) RXNQT-4363 EC-2.5.1.18 Zm00039ab448530 Zm00039ab448530_P001 conditional PWY-3261 UDP-β-L-rhamnose biosynthesis UDP-GLUCOSE-46-DEHYDRATASE-RXN EC-4.2.1.76 Zm00039ab448710 Zm00039ab448710_P001 expected