Download files for Dan340, sequenced by Beijin Academy of Agriculture and Forestry Sciences (BAAFS)
Paper: A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340. Zhao et al., 2022
       https://doi.org/10.46471/gigabyte.63

Zm-Dan340-REFERENCE-BAAFS-1.0_BUSCO_full_table.tsv           - BUSCO report
Zm-Dan340-REFERENCE-BAAFS-1.0_BUSCO_missing_busco_list.tsv   - BUSCO report: missing
Zm-Dan340-REFERENCE-BAAFS-1.0_BUSCO_short_summary.txt        - BUSCO report: summary
Zm-Dan340-REFERENCE-BAAFS-1.0_genefam.hcluster               - HMM Cluster analysis
Zm-Dan340-REFERENCE-BAAFS-1.0_genefam_hcluster_stat.stat     - HMM Cluster analysis stats
Zm-Dan340-REFERENCE-BAAFS-1.0.fa.gz                          - Full genome sequence
Zm-Dan340-REFERENCE-BAAFS-1.0_Zm00104aa.1.gff3.gz            - Annotation GFF
Zm-Dan340-REFERENCE-BAAFS-1.0_Zm00104aa.1.cds.fa.gz          - CDS multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0_Zm00104aa.protein.fa.gz        - Protein multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.miRNA.gff3.gz                  - micro RNA multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.rRNA.gff3.gz                   - ribosomal RNA multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.snRNA.gff3.gz                  - small nuclear RNA multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.tRNA.gff3.gz                   - transfer RNA multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.repeats.gff3.gz                - repeat multi-FASTA
Zm-Dan340-REFERENCE-BAAFS-1.0.repeats_without_trf.gff3.gz    - repeat multi-FASTA, calculated 
                                                                 without Tandem Repeat Finder
Zm-Dan340-REFERENCE-BAAFS-1.0_gene_ID_xref.xls               - cross-reference between gene
                                                                model identifiers used in 
                                                                the paper and the MaizeGDB
                                                                nomenclature.